View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18915_low_12 (Length: 263)
Name: NF18915_low_12
Description: NF18915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18915_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 49911845 - 49912094
Alignment:
| Q |
5 |
ttggttctaaatatctaacaacaccaccaaataagatagacctgttggtagagttcattcccaaatcatcattagataagttgcaatcaagcaaagagta |
104 |
Q |
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| T |
49911845 |
ttggttctaaatatctaacaacaccaccaaataagatagacctgttggtagagttcattcccaaatcatcattagataagttgcaatcaagcaaagagta |
49911944 |
T |
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| Q |
105 |
gagacctaaattgaagattttgctcaatttatcagactgaatacgattaccccagaaggcttgagcaatttcacaatctcttattta-tttatttattgg |
203 |
Q |
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| T |
49911945 |
gagacctaaattgaagattttgctccatttatcagactgaatacgattatcccggaaggcttgagcaacttcacaatctcttatttattttatttattgg |
49912044 |
T |
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| Q |
204 |
tacaacacatttacttttctacttgatactaacttgttctcgttcctatg |
253 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49912045 |
tactacacatttacttttctacttgatactaacttgttctcgttcctatg |
49912094 |
T |
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