View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18921_low_17 (Length: 210)
Name: NF18921_low_17
Description: NF18921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18921_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 48569807 - 48569983
Alignment:
| Q |
16 |
attatactgatgtaaaatatatagttttggttttctagaggatcctccatatgaggtaatcctattcaagttgtgtcggatcgcaacatgtagatacctc |
115 |
Q |
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| T |
48569807 |
attatactgttgtaaaatatatagttttggttttctagaggatcctccatatgaggtaatcctattcaagttgtgtcggatcgcaacatgtagatacctc |
48569906 |
T |
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| Q |
116 |
tcttaactataactagtattcaaacttgagtttgtcatgttgcgagagtctaaccctatcgctagctcaatcttagt |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48569907 |
tcttaactataactagtattcaaacttgagtttgtcatgttgcgagagtctaaccctatcgctagctcaatcttagt |
48569983 |
T |
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