View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18924_high_18 (Length: 239)
Name: NF18924_high_18
Description: NF18924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18924_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 1248013 - 1247791
Alignment:
| Q |
1 |
attttcggtattgttatctctcgccataactagcaatttcctttgatgatacaaatctattagtattgcaacattatttatttcatttttcatcatctta |
100 |
Q |
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| T |
1248013 |
attttcggtattgttatctctcgccataactagcaatttcctttgatgatacaaatctattagtattgcaacattatttatttcatttttcatcatctta |
1247914 |
T |
|
| Q |
101 |
tttatttggaaggcatgattgattaatttctattgatagaataaagaaaaggctgaagtgaagggtgaagccaatgaggaagcagccaccgtggaggtga |
200 |
Q |
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| T |
1247913 |
tttatttggaaggcatgattgattaatttctattgatagaataaagaaaaggctgaagtgaagggtgaagccaatgaggaagcagccaccgtggaggtga |
1247814 |
T |
|
| Q |
201 |
aggctgaagccaagggagaagag |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
1247813 |
aggctgaagccaagggagaagag |
1247791 |
T |
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