View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18924_low_12 (Length: 335)
Name: NF18924_low_12
Description: NF18924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18924_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 32210843 - 32210509
Alignment:
| Q |
1 |
atagaaactgcggcggaaaatacaaagccagaacttaatccaattaagcttgtgcctaattgtaatgttgttttagtgccagatatggctagtaaaatga |
100 |
Q |
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| T |
32210843 |
atagaaactgcggcagaaaatacaaagccagaacttaatccaattaagcttgtgcctaattgtaatgttgttttagtgccagatatggctagtaaaatga |
32210744 |
T |
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| Q |
101 |
aggcaattggtgttggtatcaaggctgcagcaaaccatccagttctcgcaaagtgtatcttgctgcatttatcatacaatattagtggattagttattga |
200 |
Q |
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| T |
32210743 |
aggcaattggtgttggtatcaaggctgcagcaaaccatccagttctcgcaaagtgtatcttgctgcatttgtcatacaatattagtggattagttattga |
32210644 |
T |
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| Q |
201 |
gtagatggaaaaataatcatagtttgtttttcgctatagtttttgaagaatcatattcagtagttaataaacatttaactagattcaagggtgatttcat |
300 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32210643 |
gtagatggaaaaataatcatagtttctttttcgctatagtttttgaagaatcatattcaatagttaataaacatttaactagattcaagggtgatttcat |
32210544 |
T |
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| Q |
301 |
aattgtgagaaaatataatttgatagatacgactc |
335 |
Q |
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||||||||||||||||||| ||||||||||||||| |
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| T |
32210543 |
aattgtgagaaaatataatatgatagatacgactc |
32210509 |
T |
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