View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18924_low_18 (Length: 251)
Name: NF18924_low_18
Description: NF18924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18924_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 12323306 - 12323083
Alignment:
| Q |
16 |
atttgtagttaattaaaccagactaaactacattatcatcttaaaggcatctccacaaaccattttcaaaacaaccctaaattaaggaaacacaagtttt |
115 |
Q |
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| T |
12323306 |
atttgtagttaattaaaccagactaaactacattatcatcttaaaggcatctccacaaaccattttcaaaacaaccctaaattaaggaaacacaagtttt |
12323207 |
T |
|
| Q |
116 |
ttaattcaagccttccttcttctcttggtaagcaaaccttatcccaactaaccaaattaaacaacctaccttccgatccaccttcccataatagccttca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12323206 |
ttaattcaagccttccttcttctcttggtaagcaaaccttatcccaactaaccaaattaaacaacctaccttccgatccaccttcccataatagccttca |
12323107 |
T |
|
| Q |
216 |
ttggatttgggttaatttacatat |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
12323106 |
ttggatttgggttaatttacatat |
12323083 |
T |
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