View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18925_high_8 (Length: 346)
Name: NF18925_high_8
Description: NF18925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18925_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 38054190 - 38054530
Alignment:
| Q |
1 |
tcggcgtttcttctttgatttaacagtttcaccagcataagagtctgaattatgtgagtacttgtaagttggcgcgaacactatttttccctctttgaag |
100 |
Q |
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| T |
38054190 |
tcggcgtttcttctttgatttaacagtttcaccagcataagagtctgaattatgtgagtacttgtaagttggcgcgaacactatttttccctctttgaag |
38054289 |
T |
|
| Q |
101 |
ccactgaaaactcgtcctgcatctctttctatgttcaactgaataaaaatgaaaagcaagtttatcaataaatatactcatgcacaatgaattgttttat |
200 |
Q |
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| T |
38054290 |
ccactgaaaactcgtcctgcatctctttctatgttcaactgaataaaaatgaaaagcaagtttatcaataaatatactcatgcacaatgaattgttttat |
38054389 |
T |
|
| Q |
201 |
tatgtatgtatatatgagtggagggacacacttgatctttctctaacaaagtgtcccagtcattatcctccaacagaacccttgtttcttcataactcag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38054390 |
tatgtatgtatatatgagtggagggacacacttgatctttctctaacaaagtgtcccagtcattatcctccaacagaacccttgtttcttcataactcag |
38054489 |
T |
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| Q |
301 |
agccactctataattcaaatctcctagccatattcttcgac |
341 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |||||| |
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| T |
38054490 |
agccactctataattcaaatctcctagccatattattcgac |
38054530 |
T |
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