View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18925_low_12 (Length: 236)
Name: NF18925_low_12
Description: NF18925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18925_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 35445373 - 35445502
Alignment:
| Q |
1 |
tctatacataactgccctatccattaatgctaaaaatgaacaaaacacaactcaaaattagtttgagcattagagactcaattaggcaatttatttgtcc |
100 |
Q |
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| T |
35445373 |
tctatacacaactgccctatccattaatgctaaaaatgaacaaaacacaactcaaaattagtttgagcattagagactcaattaggcaatttatttgtcc |
35445472 |
T |
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| Q |
101 |
agcttggttcatgaatcaaatgagcaaaac |
130 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
35445473 |
agcttggttcatgaatcaaatgagcaaaac |
35445502 |
T |
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