View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18926_high_45 (Length: 261)
Name: NF18926_high_45
Description: NF18926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18926_high_45 |
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Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 35045381 - 35045134
Alignment:
| Q |
1 |
aaggtaaaaacaattgcacttgcgacatttgttagcaaaacattttttcatgctattgttcctaatgaaaataccttgctaattaactcaaaatttggtt |
100 |
Q |
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| T |
35045381 |
aaggaaaaaacatttgcacttgcgacatttgttaacaaaacattttttcatgctattgttcctaatgaaaataccttgctaattaactcaaaatttggtt |
35045282 |
T |
|
| Q |
101 |
gagacataatttaaacctaattaaata-nnnnnnnngaaagataaacctaattacatattatttaacttagagatcaaactaatactttccgaacaatag |
199 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35045281 |
gagacataatttaaacctaattaaatatatttttttgaaagataaacctaattacatattatttaacttagagatcaaactaatactttccaaacaatag |
35045182 |
T |
|
| Q |
200 |
ccttaattaaaatgcattaaccatttatgtctagacctttgttagctc |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35045181 |
ccttaattaaaatgcattaaccatttatgtctagacctttgttagctc |
35045134 |
T |
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