View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18926_low_9 (Length: 582)

Name: NF18926_low_9
Description: NF18926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18926_low_9
NF18926_low_9
[»] chr4 (57 HSPs)
chr4 (10-582)||(43608786-43609357)
chr4 (533-582)||(35836097-35836146)
chr4 (486-582)||(23222470-23222565)
chr4 (531-582)||(25367431-25367482)
chr4 (531-582)||(32860806-32860857)
chr4 (531-582)||(55968584-55968635)
chr4 (531-582)||(55984301-55984352)
chr4 (531-580)||(27383623-27383672)
chr4 (542-582)||(6920657-6920697)
chr4 (542-582)||(7258096-7258136)
chr4 (531-582)||(2401267-2401318)
chr4 (531-582)||(10555283-10555334)
chr4 (531-582)||(11248935-11248986)
chr4 (537-580)||(26882772-26882815)
chr4 (531-582)||(29832478-29832529)
chr4 (531-582)||(29832730-29832781)
chr4 (531-582)||(33599971-33600022)
chr4 (531-582)||(41414254-41414305)
chr4 (531-582)||(41458880-41458931)
chr4 (531-582)||(42179636-42179687)
chr4 (531-582)||(42629769-42629820)
chr4 (531-580)||(34246798-34246847)
chr4 (531-580)||(42168320-42168369)
chr4 (531-576)||(46674903-46674948)
chr4 (531-580)||(48380616-48380665)
chr4 (542-582)||(3506064-3506104)
chr4 (542-582)||(5388212-5388252)
chr4 (542-582)||(52920771-52920811)
chr4 (531-582)||(388086-388137)
chr4 (531-582)||(16032333-16032384)
chr4 (531-582)||(22019133-22019184)
chr4 (531-582)||(23662569-23662620)
chr4 (531-582)||(25771165-25771216)
chr4 (531-582)||(26799387-26799438)
chr4 (531-582)||(30088785-30088836)
chr4 (531-582)||(37912490-37912541)
chr4 (531-582)||(42507723-42507774)
chr4 (531-582)||(45250113-45250164)
chr4 (551-582)||(51779596-51779627)
chr4 (531-582)||(54315096-54315147)
chr4 (552-582)||(3086242-3086272)
chr4 (544-582)||(6284037-6284075)
chr4 (532-582)||(23137729-23137779)
chr4 (531-577)||(34016810-34016856)
chr4 (542-580)||(50690607-50690645)
chr4 (531-580)||(1606980-1607029)
chr4 (547-580)||(3727159-3727192)
chr4 (531-580)||(4294118-4294167)
chr4 (160-233)||(19637903-19637976)
chr4 (551-580)||(22128783-22128812)
chr4 (545-582)||(33501378-33501415)
chr4 (537-582)||(34491870-34491915)
chr4 (531-580)||(35877032-35877081)
chr4 (531-580)||(43587708-43587757)
chr4 (531-580)||(51817133-51817182)
chr4 (552-580)||(17609167-17609195)
chr4 (538-582)||(23153705-23153749)
[»] chr1 (70 HSPs)
chr1 (10-434)||(25140364-25140782)
chr1 (531-582)||(29672346-29672397)
chr1 (542-582)||(29361431-29361471)
chr1 (531-582)||(4750387-4750438)
chr1 (531-582)||(16705337-16705388)
chr1 (531-582)||(38665098-38665149)
chr1 (537-582)||(4227795-4227840)
chr1 (531-580)||(8462470-8462519)
chr1 (531-580)||(15575053-15575102)
chr1 (531-582)||(3550031-3550082)
chr1 (531-582)||(3552747-3552798)
chr1 (531-582)||(5653675-5653726)
chr1 (531-582)||(8712065-8712116)
chr1 (531-582)||(11353603-11353654)
chr1 (531-582)||(16630041-16630092)
chr1 (531-582)||(24583872-24583923)
chr1 (531-582)||(24589541-24589592)
chr1 (531-582)||(30679316-30679367)
chr1 (531-582)||(39282575-39282626)
chr1 (160-207)||(40091290-40091337)
chr1 (533-580)||(42334447-42334494)
chr1 (531-582)||(44343831-44343882)
chr1 (531-582)||(47393569-47393620)
chr1 (532-582)||(12966942-12966992)
chr1 (542-580)||(47038501-47038539)
chr1 (160-209)||(10164888-10164937)
chr1 (537-582)||(23827379-23827424)
chr1 (531-580)||(25984418-25984467)
chr1 (537-582)||(32557946-32557991)
chr1 (306-485)||(10165001-10165181)
chr1 (542-582)||(35096666-35096706)
chr1 (542-582)||(46160392-46160432)
chr1 (531-582)||(83094-83145)
chr1 (531-582)||(1395722-1395773)
chr1 (531-582)||(4226282-4226333)
chr1 (531-582)||(26551659-26551710)
chr1 (531-582)||(27952649-27952700)
chr1 (531-582)||(38816891-38816942)
chr1 (531-582)||(48355794-48355845)
chr1 (531-582)||(49251752-49251803)
chr1 (531-582)||(52177826-52177877)
chr1 (531-582)||(52703412-52703463)
chr1 (548-582)||(20711073-20711107)
chr1 (531-581)||(31023778-31023828)
chr1 (552-582)||(38606165-38606195)
chr1 (542-580)||(38680073-38680111)
chr1 (544-582)||(40100541-40100579)
chr1 (544-582)||(45430061-45430099)
chr1 (544-582)||(51417554-51417592)
chr1 (537-582)||(1037648-1037693)
chr1 (537-582)||(1044554-1044599)
chr1 (537-582)||(5432351-5432396)
chr1 (531-580)||(13352494-13352543)
chr1 (531-580)||(13985459-13985508)
chr1 (531-580)||(14202975-14203024)
chr1 (537-582)||(15824303-15824348)
chr1 (531-580)||(16010959-16011008)
chr1 (537-582)||(22172616-22172661)
chr1 (537-582)||(23624891-23624936)
chr1 (531-580)||(26333473-26333522)
chr1 (531-580)||(34967520-34967569)
chr1 (531-580)||(39501726-39501775)
chr1 (531-580)||(39673687-39673736)
chr1 (531-580)||(50942664-50942713)
chr1 (537-582)||(51983947-51983992)
chr1 (546-582)||(7572492-7572528)
chr1 (544-580)||(8330196-8330232)
chr1 (542-578)||(32049524-32049560)
chr1 (552-580)||(35610492-35610520)
chr1 (552-580)||(41529173-41529201)
[»] chr2 (62 HSPs)
chr2 (260-461)||(30938454-30938656)
chr2 (354-485)||(25850705-25850836)
chr2 (392-485)||(26832374-26832467)
chr2 (160-233)||(25853915-25853988)
chr2 (531-580)||(6596509-6596558)
chr2 (345-482)||(25195191-25195328)
chr2 (531-582)||(1684324-1684375)
chr2 (531-582)||(26850010-26850061)
chr2 (531-582)||(28330787-28330838)
chr2 (531-582)||(39927678-39927729)
chr2 (531-582)||(40171725-40171776)
chr2 (531-580)||(1204955-1205004)
chr2 (531-580)||(6312260-6312309)
chr2 (537-582)||(19240802-19240847)
chr2 (542-582)||(1221226-1221266)
chr2 (542-582)||(19275129-19275169)
chr2 (531-579)||(24000315-24000363)
chr2 (531-579)||(27341777-27341825)
chr2 (12-80)||(30938216-30938284)
chr2 (531-582)||(5421476-5421527)
chr2 (531-582)||(9047426-9047477)
chr2 (531-582)||(14527792-14527843)
chr2 (531-582)||(22061022-22061073)
chr2 (537-580)||(34213176-34213219)
chr2 (531-582)||(40171934-40171985)
chr2 (531-582)||(40649094-40649145)
chr2 (531-582)||(40833511-40833562)
chr2 (531-582)||(44987758-44987809)
chr2 (533-582)||(3870801-3870850)
chr2 (531-580)||(14943453-14943502)
chr2 (531-580)||(16062571-16062620)
chr2 (537-582)||(25899049-25899094)
chr2 (169-234)||(30938363-30938428)
chr2 (531-582)||(12192449-12192500)
chr2 (531-582)||(12363663-12363714)
chr2 (531-582)||(19002948-19002999)
chr2 (531-582)||(34036141-34036192)
chr2 (531-582)||(36173999-36174050)
chr2 (531-582)||(43446576-43446627)
chr2 (531-582)||(45423278-45423329)
chr2 (544-582)||(14885074-14885112)
chr2 (544-582)||(44019778-44019816)
chr2 (531-580)||(9110689-9110738)
chr2 (531-580)||(19505822-19505871)
chr2 (531-580)||(22050657-22050706)
chr2 (531-580)||(29843851-29843900)
chr2 (531-580)||(36068147-36068196)
chr2 (531-580)||(36443556-36443605)
chr2 (551-580)||(39293409-39293438)
chr2 (552-580)||(3628575-3628603)
chr2 (531-579)||(4553363-4553411)
chr2 (552-580)||(5669196-5669224)
chr2 (542-582)||(10877358-10877398)
chr2 (548-576)||(13196422-13196450)
chr2 (542-582)||(13375365-13375405)
chr2 (542-582)||(15848679-15848719)
chr2 (264-312)||(20566822-20566870)
chr2 (268-352)||(25195347-25195431)
chr2 (552-580)||(35020324-35020352)
chr2 (542-582)||(39235170-39235210)
chr2 (544-580)||(42056092-42056128)
chr2 (165-209)||(43669104-43669148)
[»] chr7 (62 HSPs)
chr7 (160-233)||(20905075-20905148)
chr7 (18-88)||(20905214-20905284)
chr7 (531-582)||(25756387-25756438)
chr7 (531-582)||(27119035-27119086)
chr7 (531-582)||(34275642-34275693)
chr7 (531-582)||(35421802-35421853)
chr7 (531-582)||(39199089-39199140)
chr7 (531-582)||(46774152-46774203)
chr7 (531-580)||(1643695-1643744)
chr7 (531-580)||(12118809-12118858)
chr7 (531-580)||(24685617-24685666)
chr7 (531-582)||(5528427-5528478)
chr7 (537-580)||(5680391-5680434)
chr7 (537-580)||(5705443-5705486)
chr7 (531-582)||(21849836-21849887)
chr7 (531-582)||(25428222-25428273)
chr7 (531-582)||(38074544-38074595)
chr7 (531-582)||(42121944-42121995)
chr7 (531-582)||(47578867-47578918)
chr7 (532-582)||(32827807-32827857)
chr7 (537-582)||(3225484-3225529)
chr7 (531-580)||(18234928-18234977)
chr7 (531-580)||(29410275-29410324)
chr7 (542-582)||(7399751-7399791)
chr7 (487-582)||(39938596-39938691)
chr7 (531-582)||(9140636-9140687)
chr7 (531-582)||(18975982-18976033)
chr7 (531-582)||(22918216-22918267)
chr7 (531-582)||(25651174-25651225)
chr7 (531-582)||(32267716-32267767)
chr7 (531-582)||(33938402-33938453)
chr7 (537-580)||(39403889-39403932)
chr7 (531-582)||(40768664-40768715)
chr7 (531-582)||(41820905-41820956)
chr7 (531-582)||(44186925-44186976)
chr7 (531-582)||(44481029-44481080)
chr7 (531-582)||(46373190-46373241)
chr7 (552-582)||(5114048-5114078)
chr7 (532-582)||(7399682-7399732)
chr7 (544-582)||(9818145-9818183)
chr7 (544-582)||(10720070-10720108)
chr7 (417-485)||(20904870-20904935)
chr7 (532-582)||(29155681-29155731)
chr7 (546-580)||(40065556-40065590)
chr7 (531-580)||(4513549-4513598)
chr7 (551-580)||(6696810-6696839)
chr7 (531-580)||(19866466-19866515)
chr7 (260-341)||(20904970-20905049)
chr7 (531-580)||(24924361-24924410)
chr7 (531-580)||(28536950-28536999)
chr7 (537-582)||(31582167-31582212)
chr7 (531-580)||(37277727-37277776)
chr7 (533-582)||(37411116-37411165)
chr7 (542-582)||(2648954-2648994)
chr7 (544-580)||(3945187-3945223)
chr7 (552-580)||(4089320-4089348)
chr7 (542-582)||(22624368-22624408)
chr7 (544-580)||(24161690-24161726)
chr7 (544-580)||(28234330-28234366)
chr7 (542-582)||(35497710-35497750)
chr7 (542-582)||(42688713-42688753)
chr7 (542-582)||(43468461-43468501)
[»] chr6 (47 HSPs)
chr6 (362-485)||(31177401-31177524)
chr6 (161-233)||(31177208-31177280)
chr6 (531-582)||(15989776-15989827)
chr6 (531-582)||(3337424-3337475)
chr6 (531-582)||(4130895-4130946)
chr6 (542-582)||(3888616-3888656)
chr6 (487-582)||(6833745-6833840)
chr6 (161-233)||(31197815-31197887)
chr6 (531-582)||(1352514-1352565)
chr6 (531-578)||(2603587-2603634)
chr6 (531-582)||(10364657-10364708)
chr6 (531-582)||(17360642-17360693)
chr6 (531-582)||(17441699-17441750)
chr6 (531-582)||(26409090-26409141)
chr6 (531-582)||(31003947-31003998)
chr6 (531-582)||(31492923-31492974)
chr6 (531-582)||(31498312-31498363)
chr6 (531-582)||(31949328-31949379)
chr6 (531-580)||(1778866-1778915)
chr6 (531-580)||(3787135-3787184)
chr6 (167-202)||(2289622-2289657)
chr6 (531-582)||(8201503-8201554)
chr6 (531-582)||(9961358-9961409)
chr6 (531-582)||(11172928-11172979)
chr6 (531-582)||(11615395-11615446)
chr6 (531-582)||(13631250-13631301)
chr6 (531-582)||(30510942-30510993)
chr6 (422-485)||(31198072-31198135)
chr6 (544-582)||(5489638-5489676)
chr6 (532-582)||(12278937-12278987)
chr6 (544-582)||(12499658-12499696)
chr6 (544-582)||(12506987-12507025)
chr6 (544-582)||(12509205-12509243)
chr6 (544-582)||(14304402-14304440)
chr6 (544-582)||(16970473-16970511)
chr6 (531-581)||(35040023-35040073)
chr6 (531-580)||(1228438-1228487)
chr6 (531-580)||(6835755-6835804)
chr6 (531-580)||(8493587-8493636)
chr6 (531-580)||(9660415-9660464)
chr6 (531-580)||(16465859-16465908)
chr6 (166-207)||(19133634-19133675)
chr6 (531-580)||(32142418-32142467)
chr6 (552-580)||(2010258-2010286)
chr6 (542-582)||(8415191-8415231)
chr6 (544-580)||(27080523-27080559)
chr6 (542-582)||(30240260-30240300)
[»] chr8 (70 HSPs)
chr8 (360-484)||(17318267-17318391)
chr8 (161-233)||(17318095-17318166)
chr8 (531-582)||(13779759-13779810)
chr8 (531-582)||(19715270-19715321)
chr8 (531-582)||(28074449-28074500)
chr8 (537-582)||(18203206-18203251)
chr8 (531-580)||(21582911-21582960)
chr8 (531-580)||(25838662-25838711)
chr8 (531-580)||(30852017-30852066)
chr8 (487-582)||(31602901-31602996)
chr8 (531-582)||(6796143-6796194)
chr8 (531-582)||(16421903-16421954)
chr8 (531-582)||(16872547-16872598)
chr8 (161-224)||(17341643-17341705)
chr8 (537-580)||(24333057-24333100)
chr8 (531-582)||(24616559-24616610)
chr8 (531-582)||(29938333-29938384)
chr8 (531-582)||(36652477-36652528)
chr8 (531-582)||(39168977-39169028)
chr8 (531-582)||(42373194-42373245)
chr8 (531-580)||(12000523-12000572)
chr8 (531-580)||(27667511-27667560)
chr8 (531-580)||(38896648-38896697)
chr8 (542-582)||(5371594-5371634)
chr8 (544-580)||(6900068-6900104)
chr8 (542-582)||(24450571-24450611)
chr8 (544-580)||(24530089-24530125)
chr8 (161-209)||(26078843-26078891)
chr8 (542-582)||(42192413-42192453)
chr8 (531-582)||(600238-600289)
chr8 (531-582)||(6878555-6878606)
chr8 (531-582)||(7427357-7427408)
chr8 (531-582)||(11588981-11589032)
chr8 (531-582)||(14584800-14584851)
chr8 (531-582)||(15225882-15225933)
chr8 (531-582)||(18673411-18673462)
chr8 (531-582)||(22578248-22578299)
chr8 (531-582)||(27919613-27919664)
chr8 (531-582)||(29949140-29949191)
chr8 (531-582)||(30087915-30087966)
chr8 (531-582)||(30526200-30526251)
chr8 (531-582)||(35544180-35544231)
chr8 (531-582)||(39645896-39645947)
chr8 (531-582)||(40483770-40483821)
chr8 (542-580)||(4135741-4135779)
chr8 (542-580)||(20091165-20091203)
chr8 (544-582)||(24612899-24612937)
chr8 (531-581)||(37954666-37954716)
chr8 (542-580)||(42927169-42927207)
chr8 (531-580)||(13429111-13429160)
chr8 (537-582)||(23606232-23606277)
chr8 (531-576)||(26746871-26746916)
chr8 (531-580)||(34908723-34908772)
chr8 (537-582)||(37505004-37505049)
chr8 (537-582)||(37965024-37965069)
chr8 (537-582)||(39284245-39284290)
chr8 (533-582)||(40734886-40734935)
chr8 (531-580)||(41541169-41541218)
chr8 (544-580)||(4924461-4924497)
chr8 (552-580)||(8378278-8378306)
chr8 (531-579)||(8738016-8738064)
chr8 (544-580)||(9267692-9267728)
chr8 (542-582)||(11714492-11714532)
chr8 (531-579)||(15286550-15286598)
chr8 (531-579)||(15466919-15466967)
chr8 (544-580)||(23897736-23897772)
chr8 (542-582)||(38367626-38367666)
chr8 (544-580)||(41256390-41256426)
chr8 (542-582)||(42946607-42946647)
chr8 (542-582)||(42981247-42981287)
[»] chr5 (44 HSPs)
chr5 (531-582)||(35080309-35080360)
chr5 (532-582)||(34381558-34381608)
chr5 (537-582)||(13978412-13978457)
chr5 (542-582)||(4890125-4890165)
chr5 (531-582)||(4456436-4456487)
chr5 (531-582)||(9246068-9246119)
chr5 (531-582)||(14153684-14153735)
chr5 (531-582)||(18473172-18473223)
chr5 (531-582)||(34163165-34163216)
chr5 (531-582)||(34606983-34607034)
chr5 (531-582)||(37337068-37337119)
chr5 (537-582)||(6517597-6517642)
chr5 (531-580)||(10164719-10164768)
chr5 (531-580)||(28377680-28377729)
chr5 (531-580)||(29816247-29816296)
chr5 (531-580)||(36487326-36487375)
chr5 (542-582)||(11130205-11130245)
chr5 (544-580)||(21772837-21772873)
chr5 (531-578)||(4060766-4060813)
chr5 (486-580)||(5288844-5288938)
chr5 (531-582)||(9248971-9249022)
chr5 (531-582)||(12360830-12360881)
chr5 (551-582)||(15251412-15251443)
chr5 (531-582)||(23991754-23991805)
chr5 (551-582)||(28119058-28119089)
chr5 (531-582)||(29619405-29619456)
chr5 (531-582)||(34382009-34382060)
chr5 (531-582)||(35288158-35288209)
chr5 (531-582)||(36347394-36347445)
chr5 (537-580)||(39990390-39990433)
chr5 (531-582)||(40915601-40915652)
chr5 (531-582)||(42940809-42940860)
chr5 (544-582)||(10934940-10934978)
chr5 (544-582)||(25538096-25538134)
chr5 (542-580)||(25784720-25784758)
chr5 (543-580)||(6923068-6923105)
chr5 (531-576)||(7414658-7414703)
chr5 (537-582)||(8042542-8042587)
chr5 (541-582)||(29000903-29000944)
chr5 (163-196)||(31153122-31153155)
chr5 (537-582)||(39410605-39410650)
chr5 (542-582)||(3099224-3099264)
chr5 (164-232)||(13970981-13971049)
chr5 (542-582)||(27293486-27293526)
[»] scaffold0154 (1 HSPs)
scaffold0154 (487-582)||(4167-4262)
[»] chr3 (61 HSPs)
chr3 (531-582)||(30744895-30744946)
chr3 (531-582)||(31786838-31786889)
chr3 (531-582)||(40164211-40164262)
chr3 (536-582)||(27039069-27039115)
chr3 (531-580)||(8104273-8104322)
chr3 (384-485)||(8120188-8120289)
chr3 (531-580)||(24978872-24978921)
chr3 (537-582)||(52679775-52679820)
chr3 (537-582)||(54103936-54103981)
chr3 (531-582)||(3671568-3671619)
chr3 (531-582)||(16661457-16661508)
chr3 (531-582)||(23782108-23782159)
chr3 (531-582)||(42490084-42490135)
chr3 (531-580)||(19961015-19961064)
chr3 (531-580)||(21216856-21216905)
chr3 (531-580)||(32078062-32078111)
chr3 (531-580)||(32100271-32100320)
chr3 (531-580)||(48910529-48910578)
chr3 (486-582)||(21272627-21272722)
chr3 (544-580)||(39144596-39144632)
chr3 (537-580)||(5137661-5137704)
chr3 (531-582)||(8096792-8096843)
chr3 (531-582)||(17378214-17378265)
chr3 (531-582)||(23609421-23609472)
chr3 (531-582)||(28686350-28686401)
chr3 (531-582)||(29227358-29227409)
chr3 (531-582)||(30190366-30190417)
chr3 (531-582)||(30358761-30358812)
chr3 (531-582)||(31170427-31170478)
chr3 (531-582)||(33593139-33593190)
chr3 (531-582)||(33600270-33600321)
chr3 (531-582)||(33839988-33840039)
chr3 (531-582)||(34817092-34817143)
chr3 (542-581)||(38096083-38096122)
chr3 (531-582)||(40643359-40643410)
chr3 (531-582)||(41751144-41751195)
chr3 (531-582)||(44976344-44976395)
chr3 (531-582)||(47054039-47054090)
chr3 (531-582)||(49818321-49818372)
chr3 (547-582)||(52262283-52262318)
chr3 (544-582)||(335879-335917)
chr3 (542-580)||(2929879-2929917)
chr3 (552-582)||(32852155-32852185)
chr3 (544-582)||(42939763-42939801)
chr3 (544-582)||(46195815-46195853)
chr3 (531-576)||(240667-240712)
chr3 (531-580)||(21817532-21817581)
chr3 (537-582)||(27848873-27848918)
chr3 (531-580)||(28227014-28227063)
chr3 (531-580)||(38808130-38808179)
chr3 (531-580)||(38999487-38999536)
chr3 (537-582)||(42662646-42662691)
chr3 (531-580)||(47241205-47241254)
chr3 (544-580)||(5925355-5925391)
chr3 (542-582)||(19602225-19602265)
chr3 (544-580)||(37331378-37331414)
chr3 (552-580)||(39290600-39290628)
chr3 (542-582)||(48584072-48584112)
chr3 (552-580)||(51166472-51166500)
chr3 (542-582)||(54080298-54080338)
chr3 (544-576)||(54677670-54677702)
[»] scaffold0768 (1 HSPs)
scaffold0768 (487-582)||(6088-6183)
[»] scaffold0427 (1 HSPs)
scaffold0427 (531-582)||(5274-5325)
[»] scaffold0160 (1 HSPs)
scaffold0160 (531-580)||(25950-25999)
[»] scaffold0140 (1 HSPs)
scaffold0140 (531-579)||(18315-18363)
[»] scaffold0037 (1 HSPs)
scaffold0037 (531-582)||(98905-98956)
[»] scaffold0001 (1 HSPs)
scaffold0001 (531-582)||(524334-524385)
[»] scaffold0049 (1 HSPs)
scaffold0049 (165-203)||(41700-41738)
[»] scaffold0011 (1 HSPs)
scaffold0011 (531-580)||(63387-63436)
[»] scaffold1515 (1 HSPs)
scaffold1515 (544-580)||(1501-1537)
[»] scaffold0533 (1 HSPs)
scaffold0533 (544-580)||(7263-7299)
[»] scaffold0330 (1 HSPs)
scaffold0330 (542-582)||(13887-13927)


Alignment Details
Target: chr4 (Bit Score: 331; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 10 - 582
Target Start/End: Original strand, 43608786 - 43609357
Alignment:
Q  10 gacatcatcatgggaattagaatttttggatcaacaaacttggttttgagacctcattaaaattaaaaa-gggggacaaaccttcacaacaacnnnnnnn 108  Q
    |||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||           
T  43608786 gacatcgtcatgggaattagaatttttggatcaaca----tggttttgagacctcattaaaattaaaaaagggggacaaaccttcaccacaacaaaaaat 43608881  T
Q  109 -----gagtcaaaactgaatcaatccaattttaatcgtgtgacactcctnnnnnnncaaatgaagaatttgaagttattgtagaagatgaagatgattca 203  Q
         ||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||||||||||||||    
T  43608882 taaaagagtcaaaactgagtcaatccaattttaatcgtgtgacactcctaaaaaaacaaatgaagaatttgaagttattgtggaagatgaagatgattca 43608981  T
Q  204 atttcattaaatggaatatgacattttttttgttgttcatccnnnnnnnnnnnnnngtcgatattacaccgacgtattttttgtggtatataatataacg 303  Q
    ||||||||||||||||||||| |||||||| |||||||||||              ||||||||||||||||||||||||||||||||||||||||||||    
T  43608982 atttcattaaatggaatatgatattttttt-gttgttcatcctttttttgt-----gtcgatattacaccgacgtattttttgtggtatataatataacg 43609075  T
Q  304 tcattttttgtggctgatatacaactaaccttgtataagtaatatatatgtttgccttttatgtggtggacaaagcatcgacattttacttggttaataa 403  Q
    | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  43609076 ttattttttgtggctaatatataactaaccttgtataagtaatatatatgtttgccttttatgtggtggacaaagcacccacattttacttggttaataa 43609175  T
Q  404 tatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatttgttactcccaccgtcctaa 503  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||    
T  43609176 tatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttttattttattttattttgatatttgttactccctccgtcccaa 43609275  T
Q  504 attgcatgtcgctttag---gnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| || || ||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609276 attgtatatcactttagagaagaaaaaaaattgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 43609357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 533 - 582
Target Start/End: Original strand, 35836097 - 35836146
Alignment:
Q  533 gtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35836097 gtctcaaattgtatgtcactttacaataccaatgaaacattaatgttact 35836146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 23222470 - 23222565
Alignment:
Q  486 ttactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| |||||| |||||| |||||||||||||         ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  23222470 ttactccctccgtcccaaattgtatgtcgctttaggaaaaaaat-ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 23222565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 25367482 - 25367431
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  25367482 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 25367431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 32860857 - 32860806
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  32860857 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 32860806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 55968584 - 55968635
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  55968584 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgttact 55968635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 55984352 - 55984301
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  55984352 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgttact 55984301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 27383672 - 27383623
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  27383672 ttgtctcaaattgtatgtcactttacaataccaataaaacattaatgtta 27383623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 6920657 - 6920697
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  6920657 tgtatgtcactttacaataccaatgaaacattaatgttact 6920697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 7258136 - 7258096
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  7258136 tgtatgtcactttacaataccaatgaaacattaatgttact 7258096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 2401267 - 2401318
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| | |||||||||||||||||||||||||||||    
T  2401267 ttgtcccaaattgtatgtcaatctacaataccaatgaaacattaatgttact 2401318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 10555334 - 10555283
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  10555334 ttgtcccaaattgtatgtcactttacaatatcaatgaaacattaatgttact 10555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 11248986 - 11248935
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  11248986 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 11248935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 537 - 580
Target Start/End: Original strand, 26882772 - 26882815
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  26882772 caaattgtatgtcactttacaataccaatgaaacattaatgtta 26882815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 29832478 - 29832529
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  29832478 ttgtcccaaattgtatgtcactttacaatatcaatgaaacattaatgttact 29832529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 29832781 - 29832730
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  29832781 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 29832730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 33600022 - 33599971
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  33600022 ttgtcccaaattgtatgtcactttataataccaatgaaacattaatgttact 33599971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 41414305 - 41414254
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  41414305 ttgtctcaaattatatgtcgttttacaataccaatgaaatattaatgttact 41414254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 41458931 - 41458880
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  41458931 ttgtctcaaattatatgtcgttttacaataccaatgaaaaattaatgttact 41458880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 42179687 - 42179636
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||| ||||||||    
T  42179687 ttgtcccaaattgtatgtcactttacaataccaatgaaacattgatgttact 42179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 42629820 - 42629769
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  42629820 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 42629769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 34246798 - 34246847
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | ||||||  |||||||||||||||||||||||||||||    
T  34246798 ttgtctcaaattatatgtcgctttacaataccaatgaaacattaatgtta 34246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 42168320 - 42168369
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||| ||||    
T  42168320 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaacgtta 42168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 576
Target Start/End: Original strand, 46674903 - 46674948
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaat 576  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||    
T  46674903 ttgtctcaaattttatgtcactttacaataccaatgaaacattaat 46674948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 48380616 - 48380665
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  48380616 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 48380665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 3506064 - 3506104
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  3506064 tgtatgtcactttacaatacaaatgaaacattaatgttact 3506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 5388212 - 5388252
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  5388212 tgtatgtcactttagaataccaatgaaacattaatgttact 5388252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 52920811 - 52920771
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  52920811 tgtatgtcactttaaaataccaatgaaacattaatgttact 52920771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 388086 - 388137
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| |||||||    
T  388086 ttgtctcaaattgtatgtcgctttacaataccaatgaatcattagtgttact 388137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 16032333 - 16032384
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  16032333 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgttact 16032384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 22019133 - 22019184
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  22019133 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 22019184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 23662569 - 23662620
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||| ||||||| ||||||||||||    
T  23662569 ttgtcccaaattgtatgtcactttacaatactaatgaaatattaatgttact 23662620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 25771216 - 25771165
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| |||||||||||||||| |||||||||    
T  25771216 ttgtcccaaattgtatgtcactttagaataccaatgaaacatcaatgttact 25771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 26799387 - 26799438
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  26799387 ttgtcccaaattatatgtcattttacaatacccatgcaacattaatgttact 26799438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 30088836 - 30088785
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  30088836 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 30088785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 37912490 - 37912541
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  37912490 ttgtctcaaattatatgtcgctttacaataccaatgcaacattaatgttact 37912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 42507774 - 42507723
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||| ||| |||| ||||||||||||||||||||||||||    
T  42507774 ttgtcccaaattgtatatcactttagaataccaatgaaacattaatgttact 42507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 45250113 - 45250164
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  45250113 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 45250164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 51779596 - 51779627
Alignment:
Q  551 ttttacaataccaatgaaacattaatgttact 582  Q
    ||||||||||||||||||||||||||||||||    
T  51779596 ttttacaataccaatgaaacattaatgttact 51779627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 54315096 - 54315147
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||   |||||||||||||||| |||||||||||||    
T  54315096 ttgtctcaaattgtatgtcgcattacaataccaatgaatcattaatgttact 54315147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 3086272 - 3086242
Alignment:
Q  552 tttacaataccaatgaaacattaatgttact 582  Q
    |||||||||||||||||||||||||||||||    
T  3086272 tttacaataccaatgaaacattaatgttact 3086242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 6284037 - 6284075
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  6284037 tatgtcgttttacaatatcaatgaaacattaatgttact 6284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 23137729 - 23137779
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  23137729 tgtcccaaattgtaggtcgttttacaataccaatgaaaaattaatgttact 23137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 577
Target Start/End: Original strand, 34016810 - 34016856
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatg 577  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  34016810 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatg 34016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 50690645 - 50690607
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  50690645 tgtatgtcactttaaaataccaatgaaacattaatgtta 50690607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 1607029 - 1606980
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | |||||| |||||||||||||||| |||||||||||||    
T  1607029 ttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgtta 1606980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 580
Target Start/End: Complemental strand, 3727192 - 3727159
Alignment:
Q  547 gtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||||| ||||||||||||||    
T  3727192 gtcattttacaataccaattaaacattaatgtta 3727159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 4294167 - 4294118
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | ||||||  |||||||||||||||||||||||||||||    
T  4294167 ttgtcccaaattatatgtcgctttacaataccaatgaaacattaatgtta 4294118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 19637903 - 19637976
Alignment:
Q  160 caaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    ||||||||||||||||||||||||   || |||||||| ||| |||| ||||| ||  ||||||||| ||||||    
T  19637903 caaatgaagaatttgaagttattgcgtaatatgaagattatttaattccattagataaaatatgacactttttt 19637976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 580
Target Start/End: Original strand, 22128783 - 22128812
Alignment:
Q  551 ttttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||||||||||||||||    
T  22128783 ttttacaataccaatgaaacattaatgtta 22128812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 33501378 - 33501415
Alignment:
Q  545 atgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  33501378 atgtcactttacaatatcaatgaaacattaatgttact 33501415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 34491915 - 34491870
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| |||| |||||||||||||||||||||    
T  34491915 caaattgtatgtcactttagaatatcaatgaaacattaatgttact 34491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 35877081 - 35877032
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| ||| |||||| ||||||||||||||||||    
T  35877081 ttgtcccaaattgtatgtcactttccaatactaatgaaacattaatgtta 35877032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 43587708 - 43587757
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||| ||||||||||||||||||    
T  43587708 ttgtcccaaattgtatgtcactttagaatacaaatgaaacattaatgtta 43587757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 51817182 - 51817133
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  51817182 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 51817133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 17609195 - 17609167
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  17609195 tttacaataccaatgaaacattaatgtta 17609167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 582
Target Start/End: Original strand, 23153705 - 23153749
Alignment:
Q  538 aaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  23153705 aaactatatgtcactttataataccaatgaaatattaatgttact 23153749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 8e-41; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 10 - 434
Target Start/End: Original strand, 25140364 - 25140782
Alignment:
Q  10 gacatcatcatgggaattagaatttttggatcaacaaacttggttttgagacctcattaaaattaaaaagggggacaaaccttcacaacaacnnnnnnng 109  Q
    |||||||||||||||||| || |||||||||||||||||||||||  |||||||||| || ||| |||| || ||||||||  ||| ||||        |    
T  25140364 gacatcatcatgggaatttgattttttggatcaacaaacttggttcagagacctcatgaacattgaaaaaggagacaaaccgccaccacaa-aaaaaaag 25140462  T
Q  110 agtcaaaactgaatcaatccaattttaatcgtgtgacactcctnnnnnnncaaatgaagaatttgaagttattgtagaagatgaagatgattcaatttca 209  Q
    ||||||| | || ||||||||||||||    ||||||||||||       |||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  25140463 agtcaaatc-gattcaatccaatttta----tgtgacactcctgaaaaagcaaaagaaaaatttaaagttattgtagaagatgaagatgattcaatttca 25140557  T
Q  210 ttaaatggaatatgacatttttttt--gttgttcatccnnnnnnnnnnnnnngtcgatattacaccgacgtattttttgtggtatataatataacgtcat 307  Q
    ||| ||||||||||| | ||||||   | |||| ||||              ||||||||||| ||||| |||||||||||||| ||||| ||||| |||    
T  25140558 ttagatggaatatgatacttttttgtcggtgtttatcctttttttttttt--gtcgatattaccccgacatattttttgtggtagataatgtaacgccat 25140655  T
Q  308 tttttgtggctgatatacaactaaccttgtataagtaatatatatgtttgccttttatgtggtggacaaagcatcgacattttacttggttaataatatt 407  Q
    ||||| | ||  ||||  |||||||||| ||||| | ||||| || | || ||||||||||||||||| | || ||||||||| |||||||| |||| ||    
T  25140656 tttttattgccaatatgtaactaaccttttataaattatataaatatatgacttttatgtggtggacacaacaccgacatttttcttggttattaatgtt 25140755  T
Q  408 tcgcatttaatataaatatatgtctat 434  Q
     | |||| |||||  ||||||||||||    
T  25140756 ccacattcaatattgatatatgtctat 25140782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 29672346 - 29672397
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29672346 ttgtctcaaattgtatgtcattttacaataccaatgaaacattaatgttact 29672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 29361471 - 29361431
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29361471 tgtatgtcattttacaataccaatgaaacattaatgttact 29361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 4750438 - 4750387
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  4750438 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 4750387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 16705337 - 16705388
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  16705337 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgttact 16705388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 38665098 - 38665149
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  38665098 ttgtctcaaattgtatgtcactttacaatatcaatgaaacattaatgttact 38665149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 4227795 - 4227840
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  4227795 caaattgtatgtcattttagaataccaatgaaacattaatgttact 4227840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 8462519 - 8462470
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  8462519 ttgtctcaaattatatgtcgttttacaataccaatgaaacattaatgtta 8462470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 15575102 - 15575053
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||    
T  15575102 ttgtctcaaattgtatgccactttacaataccaatgaaacattaatgtta 15575053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 3550031 - 3550082
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  3550031 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 3550082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 3552798 - 3552747
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  3552798 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 3552747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 5653726 - 5653675
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  5653726 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 5653675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 8712116 - 8712065
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  8712116 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 11353603 - 11353654
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  11353603 ttgtgtcaaattgtatgtcactttacaatatcaatgaaacattaatgttact 11353654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 16630092 - 16630041
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  16630092 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 16630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 24583872 - 24583923
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  24583872 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 24583923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 24589541 - 24589592
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  24589541 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 24589592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 30679316 - 30679367
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||||||  ||||||||||||||||||| ||||||||||||    
T  30679316 ttgtctcaaattgtatgttgttttacaataccaatgaaaaattaatgttact 30679367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 39282575 - 39282626
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  39282575 ttgtcccaaattgtatgtcactttaaaataccaatgaaacattaatgttact 39282626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 40091290 - 40091337
Alignment:
Q  160 caaatgaagaatttgaagttattgtagaagatgaagatgattcaattt 207  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||    
T  40091290 caaaagaagaatttgaagttattgaataagatgaagatgattcaattt 40091337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 533 - 580
Target Start/End: Complemental strand, 42334494 - 42334447
Alignment:
Q  533 gtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  42334494 gtctcaaattgtatgtcactttagaataccaatgaaacattaatgtta 42334447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 44343882 - 44343831
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  44343882 ttgtcccaaattgtatgtcactttaaaataccaatgaaacattaatgttact 44343831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 47393620 - 47393569
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  47393620 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 47393569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 12966942 - 12966992
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||||||    
T  12966942 tgtctcaaattgtatgtcactttacaatatcaatgaaatattaatgttact 12966992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 47038539 - 47038501
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47038539 tgtatgtcattttagaataccaatgaaacattaatgtta 47038501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 10164888 - 10164937
Alignment:
Q  160 caaatgaagaatttgaagttattgtagaagatgaagatgattcaatttca 209  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||||||    
T  10164888 caaaggaagaattttaagttattgcagaagatgtagatgattcaatttca 10164937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 23827379 - 23827424
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  23827379 caaattgtatgtcactttacaataccaatgaaatattaatgttact 23827424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 25984418 - 25984467
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  25984418 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 25984467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 32557946 - 32557991
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  32557946 caaattgtatgtcactttagaataccaatgaaacattaatgttact 32557991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 485
Target Start/End: Original strand, 10165001 - 10165181
Alignment:
Q  306 attttttgtggctgatatacaactaaccttgtataagtaatatatatgtttgccttttatgtggtggacaaagcatcgacattttacttggttaataat- 404  Q
    ||||||||||||  ||||| ||||||| || | ||| | ||||| || | || |||||||||| ||||  | ||| | |||||||  ||||||| ||||     
T  10165001 attttttgtggccaatatataactaacattatgtaaattatataaatatatgacttttatgtgttggaacatgcacctacatttttattggttattaatg 10165100  T
Q  405 atttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatttg 485  Q
    ||| |||| |||||| ||||||||||||||||||  |||| ||  ||  |||| ||| ||||| ||||||| |||||||||    
T  10165101 attccgcaattaataaaaatatatgtctatgttttagcaacaatttatattacgtttcattttattttattatgatatttg 10165181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 35096666 - 35096706
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  35096666 tgtatgtcactttagaataccaatgaaacattaatgttact 35096706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 46160392 - 46160432
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  46160392 tgtatgtcactttagaataccaatgaaacattaatgttact 46160432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 83145 - 83094
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  83145 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgttact 83094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 1395722 - 1395773
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| |||||||| |||||||||| ||||||||||||    
T  1395722 ttgtctcaaattatatgtcgttttacaaaaccaatgaaatattaatgttact 1395773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 4226282 - 4226333
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| ||||||||| |||||||||||||||||||||    
T  4226282 ttgtcccaaattatatgtcactttacaatatcaatgaaacattaatgttact 4226333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 26551710 - 26551659
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||| ||  ||||||||||||||||| |||||||||||||    
T  26551710 ttgtctcaaattgtatatcgctttacaataccaatgaatcattaatgttact 26551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 27952649 - 27952700
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||  |||||||||||||||||||||||||||||||    
T  27952649 ttgtcccaaattatatgtcgctttacaataccaatgaaacattaatgttact 27952700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 38816891 - 38816942
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  38816891 ttgtcccaaattgtatgtcggtttacaataccaatgaaaaattaatgttact 38816942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 48355794 - 48355845
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||| |||||||||||||||||||    
T  48355794 ttgtcccaaattgtatgtcgctttacaataccgatgaaacattaatgttact 48355845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 49251803 - 49251752
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  49251803 ttgtcccaaaatgtatctcactttacaatatcaatgaaacattaatgttact 49251752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 52177826 - 52177877
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||||| |||||    
T  52177826 ttgtctcaaattgtatgtctctttacaataccaatgaatcattaatattact 52177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 52703412 - 52703463
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  52703412 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttact 52703463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 20711107 - 20711073
Alignment:
Q  548 tcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||||||||||||||||||||||| |||||    
T  20711107 tcattttacaataccaatgaaacattaatattact 20711073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 581
Target Start/End: Complemental strand, 31023828 - 31023778
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttac 581  Q
    ||||| |||| | |||||| |||||||||| ||||||||||||||||||||    
T  31023828 ttgtcccaaattatatgtcgttttacaatatcaatgaaacattaatgttac 31023778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 38606195 - 38606165
Alignment:
Q  552 tttacaataccaatgaaacattaatgttact 582  Q
    |||||||||||||||||||||||||||||||    
T  38606195 tttacaataccaatgaaacattaatgttact 38606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 38680111 - 38680073
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  38680111 tgtatgtcactttacaataccaatgaaatattaatgtta 38680073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 40100541 - 40100579
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  40100541 tatgtcactttacaataccaatgaaatattaatgttact 40100579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 45430061 - 45430099
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  45430061 tatgtcgttttacaataccaatgcaacattaatgttact 45430099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 51417592 - 51417554
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  51417592 tatgtcgttttacaataccaatgaaatattaatgttact 51417554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 1037693 - 1037648
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  1037693 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 1037648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 1044599 - 1044554
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  1044599 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 1044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 5432396 - 5432351
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  5432396 caaattgtatgtcactttagaataccaattaaacattaatgttact 5432351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 13352494 - 13352543
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | ||||||  |||||||||||||||||||||||||||||    
T  13352494 ttgtcccaaattatatgtcgctttacaataccaatgaaacattaatgtta 13352543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 13985508 - 13985459
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | |||||   |||||||||||||||||||||||||||||    
T  13985508 ttgtctcaaattatatgttgatttacaataccaatgaaacattaatgtta 13985459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 14202975 - 14203024
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  14202975 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 14203024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 15824348 - 15824303
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||||    
T  15824348 caaattgtatgtcgctttacaatactaatgaaacattaatgttact 15824303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 16010959 - 16011008
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||    
T  16010959 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgtta 16011008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 22172661 - 22172616
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  22172661 caaattgtatgtcactttagaatacaaatgaaacattaatgttact 22172616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 23624891 - 23624936
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| |||| |||||||||||||||||||||    
T  23624891 caaattgtatgtcactttagaatatcaatgaaacattaatgttact 23624936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 26333522 - 26333473
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||| ||||||||||||||||||    
T  26333522 ttgtcccaaattgtatgtcactttagaatactaatgaaacattaatgtta 26333473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 34967569 - 34967520
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||    
T  34967569 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgtta 34967520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 39501726 - 39501775
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| ||| |||||||  ||||||||||||||||||| ||||||||||    
T  39501726 ttgtcttaaattgtatgttgttttacaataccaatgaaatattaatgtta 39501775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 39673736 - 39673687
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||    
T  39673736 ttgtcccaaattatatgtcgttttacaataccaatgaaatattaatgtta 39673687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 50942664 - 50942713
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  50942664 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 50942713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 51983992 - 51983947
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  51983992 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 51983947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 7572528 - 7572492
Alignment:
Q  546 tgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||||| |||||||||||||||||||||    
T  7572528 tgtcgttttacaatatcaatgaaacattaatgttact 7572492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 8330196 - 8330232
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8330196 tatgtcactttacaataccaatgcaacattaatgtta 8330232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 578
Target Start/End: Complemental strand, 32049560 - 32049524
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgt 578  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  32049560 tgtatgtcactttagaataccaatgaaacattaatgt 32049524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Original strand, 35610492 - 35610520
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  35610492 tttacaataccaatgaaacattaatgtta 35610520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Original strand, 41529173 - 41529201
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  41529173 tttacaataccaatgaaacattaatgtta 41529201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 260 - 461
Target Start/End: Original strand, 30938454 - 30938656
Alignment:
Q  260 gtcgatattacaccgacgtattttttgtggtatataatataacgtcattttttgtggctgatatacaactaaccttgtataagta---atatatatgttt 356  Q
    ||||||| |||| |||| |||||||||||||| ||||| |||   |||||||||||||  ||||| |||||||||| ||||  ||   ||||| || |||    
T  30938454 gtcgatagtacatcgacatattttttgtggtagataatgtaaaaccattttttgtggcaaatatataactaaccttttatagatatatatataaatattt 30938553  T
Q  357 gccttttatgtggtggacaaagcatcgacattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtacttta 456  Q
    | |||||||||||||||||||||| | ||| ||| |||||||  |||| || ||||||||||||||  |||||| ||||||| | ||||||  |||||||    
T  30938554 gacttttatgtggtggacaaagcaccaacaattttcttggtttttaatgttccgcatttaatataa--atatgtttatgttttgacaataatctacttta 30938651  T
Q  457 ccttt 461  Q
    |||||    
T  30938652 ccttt 30938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 354 - 485
Target Start/End: Complemental strand, 25850836 - 25850705
Alignment:
Q  354 tttgccttttatgtggtggacaaagcatcgacattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtact 453  Q
    |||| ||||||||| ||| ||||  || |||| ||||||| | ||| ||||||| |||||||| ||||||||||||| ||||||||| |||| | ||| |    
T  25850836 tttgacttttatgttgtgtacaatacaccgacgttttactcgattattaatattccgcatttattataaatatatgtttatgtttcgacaatcatgtatt 25850737  T
Q  454 ttaccttttattttgttttattttgatatttg 485  Q
    |||||||| ||||||||||||| |||||||||    
T  25850736 ttacctttcattttgttttattatgatatttg 25850705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 392 - 485
Target Start/End: Complemental strand, 26832467 - 26832374
Alignment:
Q  392 cttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatttg 485  Q
    |||||||| |||| || |||||||||||||| ||||||||| | ||||||||||||  |||||||||||| ||||||||||||| |||||||||    
T  26832467 cttggttattaatgttccgcatttaatataattatatgtctctctttcggcaataacctactttacctttcattttgttttattctgatatttg 26832374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 25853988 - 25853915
Alignment:
Q  160 caaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||| ||||||||| ||||||    
T  25853988 caaatgaagaatttgaagttattgcggaatatgaagatgattcaatttcattagatgaaatatgacactttttt 25853915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 6596509 - 6596558
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6596509 ttgtctcaaattgtatgtcattttacaataccaatgaaacattaatgtta 6596558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 345 - 482
Target Start/End: Complemental strand, 25195328 - 25195191
Alignment:
Q  345 atatatatgtttgccttttatgtggtggacaaagcatcgacattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaa 444  Q
    |||||||| |||| ||| ||||| |||  |||  |||| |||||||||| ||||| |||| || |||||||| |||||||| |||| || ||||| |||     
T  25195328 atatatatatttgacttctatgttgtgtgcaagacatcaacattttactcggttattaatgttccgcatttattataaatacatgtttaagtttcagcat 25195229  T
Q  445 taaagtactttaccttttattttgttttattttgatat 482  Q
    ||| |||||||||  || ||||||||||||||||||||    
T  25195228 taatgtactttactgttcattttgttttattttgatat 25195191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 1684375 - 1684324
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1684375 ttgtcccaaattgtatgtcattttacaataccaatgaaacattaatgttact 1684324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 26850061 - 26850010
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  26850061 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 26850010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 28330787 - 28330838
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  28330787 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 28330838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 39927729 - 39927678
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  39927729 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 39927678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 40171776 - 40171725
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  40171776 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 40171725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 1204955 - 1205004
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  1204955 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgtta 1205004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 6312260 - 6312309
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  6312260 ttgtctcaaattgtatgtcactttacaataccgatgaaacattaatgtta 6312309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 19240847 - 19240802
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  19240847 caaattgtatgtcactttacaataccaatgaaacattaatgttact 19240802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 1221266 - 1221226
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  1221266 tgtatgtcactttacaataccaatgaaacattaatgttact 1221226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 19275169 - 19275129
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  19275169 tgtatgtcactttacaataccaatgaaacattaatgttact 19275129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 24000363 - 24000315
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  24000363 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgtt 24000315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 27341825 - 27341777
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  27341825 ttgtctcaaattgtatgtcacttttcaataccaatgaaacattaatgtt 27341777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 30938216 - 30938284
Alignment:
Q  12 catcatcatgggaattagaatttttggatcaacaaacttggttttgagacctcattaaaattaaaaagg 80  Q
    |||||||||||||||| || ||| |||||||| ||||||||||  |||||||||| || ||||||||||    
T  30938216 catcatcatgggaatttgattttctggatcaagaaacttggttccgagacctcatgaacattaaaaagg 30938284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 5421476 - 5421527
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  5421476 ttgtcccaaattgtatgtcgttttacaataccaatgaaatattaatgttact 5421527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 9047477 - 9047426
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  9047477 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 9047426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 14527792 - 14527843
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  14527792 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 14527843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 22061022 - 22061073
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||||||||||||||||||||||||||||||    
T  22061022 ttgtcccaaattatatgtcactttacaataccaatgaaacattaatgttact 22061073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 537 - 580
Target Start/End: Original strand, 34213176 - 34213219
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  34213176 caaattgtatgtcactttacaataccaatgaaacattaatgtta 34213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 40171934 - 40171985
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||    
T  40171934 ttgtcccaaattgtatgtcactttacaataccaatgacacattaatgttact 40171985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 40649094 - 40649145
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| |||||||||||||||||| |||||||||||||    
T  40649094 ttgtcccaaattgtatgtcgttttacaataccaatgaatcattaatgttact 40649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 40833511 - 40833562
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  40833511 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 40833562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 44987758 - 44987809
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||||||||  |||||||||||||||| |||||||||||||    
T  44987758 ttgtctcaaattgtatgtcacattacaataccaatgaatcattaatgttact 44987809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 533 - 582
Target Start/End: Original strand, 3870801 - 3870850
Alignment:
Q  533 gtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||||||||    
T  3870801 gtctcaaattgtatgtcgctttacaataccaatgcaacattaatgttact 3870850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 14943502 - 14943453
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  14943502 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 14943453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 16062571 - 16062620
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| | || ||||||||||||||||||||||||    
T  16062571 ttgtctcaaattgtatgtcactgtagaataccaatgaaacattaatgtta 16062620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 25899049 - 25899094
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  25899049 caaattgtatgtcactttagaataccaatgaaacattaatgttact 25899094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 30938363 - 30938428
Alignment:
Q  169 aatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacatttttttt 234  Q
    ||||| ||||||||| ||||||||| ||||||| ||||   ||| |||||||||||||||||||||    
T  30938363 aatttaaagttattgcagaagatgaggatgattgaattatgttagatggaatatgacatttttttt 30938428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 12192449 - 12192500
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||||||||||||||||| ||||||||||||    
T  12192449 ttgtcccaaattatatgtcactttacaataccaatgaaatattaatgttact 12192500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 12363663 - 12363714
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  12363663 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttact 12363714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 19002948 - 19002999
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||||  ||| ||||||||||||||||||||||||||    
T  19002948 ttgtcccaaattgtatgtcacattagaataccaatgaaacattaatgttact 19002999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 34036141 - 34036192
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  34036141 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 34036192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 36173999 - 36174050
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  36173999 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgttact 36174050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 43446576 - 43446627
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  43446576 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgttact 43446627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 45423278 - 45423329
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||| ||||||||||||||||    
T  45423278 ttgtctcaaattatatgtctctttacaataccaataaaacattaatgttact 45423329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 14885074 - 14885112
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  14885074 tatgtcgttttacaataccaatgaaaaattaatgttact 14885112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 44019778 - 44019816
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  44019778 tatgtcgttttacaataccaatgaaatattaatgttact 44019816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 9110689 - 9110738
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||    
T  9110689 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgtta 9110738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 19505871 - 19505822
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||||| |||||||||||||| ||| |||||||||||    
T  19505871 ttgtcccaaattgtatgtcgttttacaataccaacgaagcattaatgtta 19505822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 22050706 - 22050657
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||    
T  22050706 ttgtctcaaattatatgtcgctttacaataccaatgaaatattaatgtta 22050657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 29843900 - 29843851
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| || |||||| | |||||||||||||||| ||||||||||    
T  29843900 ttgtctcaaattgcatgtcactatacaataccaatgaaatattaatgtta 29843851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 36068147 - 36068196
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  36068147 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 36068196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 36443556 - 36443605
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | || |||  |||||||||||||||||||||||||||||    
T  36443556 ttgtctcaaattatacgtcgctttacaataccaatgaaacattaatgtta 36443605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 580
Target Start/End: Original strand, 39293409 - 39293438
Alignment:
Q  551 ttttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||||||||||||||||    
T  39293409 ttttacaataccaatgaaacattaatgtta 39293438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 3628603 - 3628575
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  3628603 tttacaataccaatgaaacattaatgtta 3628575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 4553363 - 4553411
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    ||||| |||| | |||||||||||||||||||| ||||||| |||||||    
T  4553363 ttgtcacaaattatatgtcattttacaataccattgaaacaataatgtt 4553411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 5669224 - 5669196
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  5669224 tttacaataccaatgaaacattaatgtta 5669196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 10877358 - 10877398
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  10877358 tgtatgtcgctttacaataccaatgaaaaattaatgttact 10877398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 576
Target Start/End: Original strand, 13196422 - 13196450
Alignment:
Q  548 tcattttacaataccaatgaaacattaat 576  Q
    |||||||||||||||||||||||||||||    
T  13196422 tcattttacaataccaatgaaacattaat 13196450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 13375365 - 13375405
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| |||||||||||||||||||| |||||    
T  13375365 tgtatgtcactttagaataccaatgaaacattaatcttact 13375405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 15848679 - 15848719
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  ||||||||||||||||| |||||||||||||    
T  15848679 tgtatgtcgctttacaataccaatgaatcattaatgttact 15848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 20566870 - 20566822
Alignment:
Q  264 atattacaccgacgtattttttgtggtatataatataacgtcatttttt 312  Q
    ||||||||||||| ||||||||| |||  ||||||||||| ||||||||    
T  20566870 atattacaccgacatattttttgcggtcgataatataacgccatttttt 20566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 25195431 - 25195347
Alignment:
Q  268 tacaccgacgtattttttgtggtatataatataacgtcattttttgtggctgatatacaactaaccttgtataagtaatatatat 352  Q
    ||||||||||||||||||  | |||||||| ||||| |||||||| ||||  ||||  |||||||||| ||| | | ||||||||    
T  25195431 tacaccgacgtatttttttggatatataatgtaacgccattttttatggccaatatgtaactaaccttatatgaattatatatat 25195347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 35020352 - 35020324
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  35020352 tttacaataccaatgaaacattaatgtta 35020324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 39235210 - 39235170
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  39235210 tgtatgtcgctttacaataccaatgaaaaattaatgttact 39235170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 42056092 - 42056128
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  42056092 tatgtcactttagaataccaatgaaacattaatgtta 42056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 43669148 - 43669104
Alignment:
Q  165 gaagaatttgaagttattgtagaagatgaagatgattcaatttca 209  Q
    ||||||||| |||||||||  ||||||||||| ||||||||||||    
T  43669148 gaagaatttcaagttattggggaagatgaagaagattcaatttca 43669104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 20905148 - 20905075
Alignment:
Q  160 caaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  20905148 caaatgaagaatttgaagttatcgtggaagatgaatatgattcaatttcattagatggaatatgacactttttt 20905075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 20905284 - 20905214
Alignment:
Q  18 catgggaattagaatttttggatcaacaaacttggttttgagacctcattaaaattaaaaagggggacaaa 88  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| |||| || ||||||    
T  20905284 catgggaatttgaatttttggatcaacaaacttggttatgagacctcatgaaaattgaaaaaggagacaaa 20905214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 25756387 - 25756438
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  25756387 ttgtctcaaattgtatgtcactttacaataccaatgaaacattaacgttact 25756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 27119086 - 27119035
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  27119086 ttgtctcgaattgtatgtcactttacaataccaatgaaacattaatgttact 27119035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 34275693 - 34275642
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  34275693 ttgtctcaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 34275642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 35421853 - 35421802
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  35421853 ttgtctcaaattgtatgtcactttacaataccaatgaaaaattaatgttact 35421802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 39199089 - 39199140
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  39199089 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 39199140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 46774152 - 46774203
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  46774152 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 46774203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 1643744 - 1643695
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  1643744 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgtta 1643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 12118858 - 12118809
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12118858 ttgtcccaaactgtatgtcattttagaataccaatgaaatattaatgtta 12118809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 24685666 - 24685617
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  24685666 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgtta 24685617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 5528427 - 5528478
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  5528427 ttgtcccaaattgtatgtctttttacaataccaatgaaaaattaatgttact 5528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 5680434 - 5680391
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  5680434 caaattgtatgtcactttacaataccaatgaaacattaatgtta 5680391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 5705486 - 5705443
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  5705486 caaattgtatgtcactttacaataccaatgaaacattaatgtta 5705443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 21849887 - 21849836
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| |||||||||||||||| |||||||||||||||    
T  21849887 ttgtctcaaattatatgtcgttttacaataccaatgcaacattaatgttact 21849836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 25428222 - 25428273
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  25428222 ttgtcccaaattgtatgtcactttataataccaatgaaacattaatgttact 25428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 38074544 - 38074595
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||||||||||||||||    
T  38074544 ttgtcccaaattgtatgtcgctttacaataccaatgaaacattaatgttact 38074595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 42121944 - 42121995
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||| |||||    
T  42121944 ttgtctcaaattatatgtcactttacaataccaatgaaacattaatattact 42121995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 47578918 - 47578867
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  47578918 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 47578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 582
Target Start/End: Complemental strand, 32827857 - 32827807
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||| ||||||||  |||||||||||||||||||||||||||||||    
T  32827857 tgtcacaaattgtatgtcgctttacaataccaatgaaacattaatgttact 32827807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 3225484 - 3225529
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  3225484 caaattgtatgtcgttttacaataccaatgaaaaattaatgttact 3225529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 18234928 - 18234977
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  18234928 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 18234977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 29410324 - 29410275
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | ||||||||||||||||||||||| |||||||||||||    
T  29410324 ttgtcccaaattatatgtcattttacaataccaatgcaacattaatgtta 29410275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 7399751 - 7399791
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  7399751 tgtatgtcactttacaatatcaatgaaacattaatgttact 7399791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 39938596 - 39938691
Alignment:
Q  487 tactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| |||| | |||||| |||||||||||||         |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  39938596 tactccctccgtaccaaattgtatgtcgctttagggaaattgttttgtctcaaattatatgtcgctttacaataccaatgtaacattaatgttact 39938691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 9140636 - 9140687
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||||||||||||||||||| ||| ||||||||||||    
T  9140636 ttgtcccaaattatatgtcattttacaataccaataaaatattaatgttact 9140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 18975982 - 18976033
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  18975982 ttgtctcaaattatatgtcgctttacaataccaatgcaacattaatgttact 18976033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 22918216 - 22918267
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||| ||||||||||||||||||||||||||    
T  22918216 ttgtcccaaattatatgtcactttataataccaatgaaacattaatgttact 22918267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 25651225 - 25651174
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||| ||||||||||||||||||||| |||||    
T  25651225 ttgtcccaaattgtatgtcactttgcaataccaatgaaacattaattttact 25651174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 32267767 - 32267716
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | || ||||||||| |||||||||| |||||||||||||||    
T  32267767 ttgtctcaaattatacgtcattttaaaataccaatgcaacattaatgttact 32267716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 33938453 - 33938402
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  33938453 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 33938402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 39403932 - 39403889
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||    
T  39403932 caaattgtatgtcactttacaataccaataaaacattaatgtta 39403889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 40768715 - 40768664
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  40768715 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 40768664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 41820905 - 41820956
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| |||||||||||||||| |||||||||||||||    
T  41820905 ttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgttact 41820956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 44186925 - 44186976
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  44186925 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 44186976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 44481029 - 44481080
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  44481029 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 44481080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 46373241 - 46373190
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  46373241 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 46373190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 5114078 - 5114048
Alignment:
Q  552 tttacaataccaatgaaacattaatgttact 582  Q
    |||||||||||||||||||||||||||||||    
T  5114078 tttacaataccaatgaaacattaatgttact 5114048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 7399682 - 7399732
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  ||||||||| ||||||||| | |||||||||||||||||||    
T  7399682 tgtctcaagttgtatgtcactttacaatatcgatgaaacattaatgttact 7399732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 9818145 - 9818183
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  9818145 tatgtcgttttacaataccaatgaaatattaatgttact 9818183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 10720070 - 10720108
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  10720070 tatgtcgttttacaataccaatgaaatattaatgttact 10720108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 20904935 - 20904870
Alignment:
Q  417 atataaatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatttg 485  Q
    ||||| |||||||||||||||||||| ||    |||||||||||| |||||||||||||  ||||||||    
T  20904935 atatatatatatgtctatgtttcggcgatc---tactttacctttcattttgttttattccgatatttg 20904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 582
Target Start/End: Complemental strand, 29155731 - 29155681
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  29155731 tgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 29155681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 546 - 580
Target Start/End: Complemental strand, 40065590 - 40065556
Alignment:
Q  546 tgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||||||||||||||||||||||||    
T  40065590 tgtcgttttacaataccaatgaaacattaatgtta 40065556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 4513598 - 4513549
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||||| ||||||||||| ||||||| ||||||||||    
T  4513598 ttgtcccaaattgtatgtcgttttacaatactaatgaaaaattaatgtta 4513549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 580
Target Start/End: Complemental strand, 6696839 - 6696810
Alignment:
Q  551 ttttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||||||||||||||||    
T  6696839 ttttacaataccaatgaaacattaatgtta 6696810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 19866515 - 19866466
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||    
T  19866515 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgtta 19866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 20905049 - 20904970
Alignment:
Q  260 gtcgatattacaccgacgtattttttgtggtatataatataacgtcattttttgtggctgatatacaactaaccttgtataa 341  Q
    |||||||||||| |||| ||||||| |||||| ||||| ||| |||| ||||||||||  ||||| |||||||||| |||||    
T  20905049 gtcgatattacatcgacttattttt-gtggtagataatgtaatgtca-tttttgtggcaaatatataactaaccttttataa 20904970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 24924410 - 24924361
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||  ||||||||  |||||||||||||||||| ||||||||||    
T  24924410 ttgtctcaatttgtatgtcgctttacaataccaatgaaaaattaatgtta 24924361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 28536999 - 28536950
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||    
T  28536999 ttgtctcaaattatatgtcgctttacaataccaatgaaaaattaatgtta 28536950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 31582212 - 31582167
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||| |||||||||| ||||||| |||||||||||||    
T  31582212 caaattgtatgtcgttttacaatatcaatgaatcattaatgttact 31582167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 37277727 - 37277776
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||    
T  37277727 ttgtcccaaattatatgtcgttttacaataccaatgaaatattaatgtta 37277776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 582
Target Start/End: Original strand, 37411116 - 37411165
Alignment:
Q  533 gtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| ||||||||  ||||||||||||||| ||| |||||||||||    
T  37411116 gtctcaaattgtatgtcgctttacaataccaatgcaactttaatgttact 37411165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 2648954 - 2648994
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  2648954 tgtatgtcactttacaatgccaaagaaacattaatgttact 2648994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 3945187 - 3945223
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| |||||||||||||||| |||||||||||||    
T  3945187 tatgtcgttttacaataccaatgcaacattaatgtta 3945223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Original strand, 4089320 - 4089348
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  4089320 tttacaataccaatgaaacattaatgtta 4089348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 22624368 - 22624408
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| |||| |||||||||||||||||||||    
T  22624368 tgtatgtcactttagaatatcaatgaaacattaatgttact 22624408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 24161690 - 24161726
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  24161690 tatgtcattttacgataccaatgaaatattaatgtta 24161726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 28234366 - 28234330
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  28234366 tatgtcactttagaataccaatgaaacattaatgtta 28234330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 35497710 - 35497750
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  35497710 tgtatgtcgctttacaataccaatgaaaaattaatgttact 35497750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 42688753 - 42688713
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  42688753 tgtatctcgttttacaataccaatgaaaaattaatgttact 42688713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 43468501 - 43468461
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  43468501 tgtatgtcgctttacaataccaatgaaaaattaatgttact 43468461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 485
Target Start/End: Original strand, 31177401 - 31177524
Alignment:
Q  362 ttatgtggtggacaaagcatcgacattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttt 461  Q
    |||||||||||||||| || | ||| ||| ||| |||| |||| || |||||||||||||||||||||||||||||| |||||     ||||||||||||    
T  31177401 ttatgtggtggacaaaacaccaacaattttctttgttattaatgttccgcatttaatataaatatatgtctatgttttggcaaatttatactttaccttt 31177500  T
Q  462 tattttgttttattttgatatttg 485  Q
     ||||||||||||| | |||||||    
T  31177501 cattttgttttattcttatatttg 31177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 31177208 - 31177280
Alignment:
Q  161 aaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| | ||| ||||||||||| | ||||||    
T  31177208 aaatgaagaatttgaagttattgcggaagatgaagatgattcaattccgttagatggaatatgaaactttttt 31177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 15989827 - 15989776
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  15989827 ttgtcccaaattgtatgtcattttacaataccaatgaaacattaatgttact 15989776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 3337424 - 3337475
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  3337424 ttgtctcaaattgtatgtcactttacaatatcaatgaaacattaatgttact 3337475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 4130895 - 4130946
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  4130895 ttgtcccaaattgtatgtcgttttacaataccaatgaaacattaatgttact 4130946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 3888616 - 3888656
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  3888616 tgtatgtcactttacaataccaatgaaacattaatgttact 3888656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 6833745 - 6833840
Alignment:
Q  487 tactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| || |||||||||| |||||||||||||         |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  6833745 tactccctccatcctaaattgtatgtcgctttagggaaaaaaatttgtctcaaattatatgtcgctttacaataccaatgtaacattaatgttact 6833840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 31197815 - 31197887
Alignment:
Q  161 aaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||| | ||| |||||| |||| | ||||||    
T  31197815 aaatgaaaaatttgaagttattgcggaagatgaagatgattcaattccgttagatggaagatgaaactttttt 31197887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 1352514 - 1352565
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||||||||||||||||    
T  1352514 ttgtcccaaattgtatgtcgctttacaataccaatgaaacattaatgttact 1352565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 2603634 - 2603587
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgt 578  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  2603634 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgt 2603587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 10364708 - 10364657
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  10364708 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 10364657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 17360642 - 17360693
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  17360642 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 17360693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 17441699 - 17441750
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||| |||||||||||||| ||||||||||||||||    
T  17441699 ttgtctcaaattatatgtcactttacaataccaataaaacattaatgttact 17441750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 26409090 - 26409141
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  26409090 ttgtcccaaattgtatgtcactttacattaccaatgaaacattaatgttact 26409141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 31003947 - 31003998
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||||||||||||| |||||||||||||||||||||    
T  31003947 ttgtcccaaattatatgtcattttacaatagcaatgaaacattaatgttact 31003998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 31492923 - 31492974
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  31492923 ttgtcccaaattgtatgtcactttacaataccaatgaaatattaatgttact 31492974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 31498312 - 31498363
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  31498312 ttgtcccaaattgtatgtcactttacaataccaatgaaatattaatgttact 31498363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 31949379 - 31949328
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  31949379 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 31949328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 1778866 - 1778915
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||    
T  1778866 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgtta 1778915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 3787135 - 3787184
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  3787135 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 3787184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 2289657 - 2289622
Alignment:
Q  167 agaatttgaagttattgtagaagatgaagatgattc 202  Q
    |||||||||||| |||||||||||||||||||||||    
T  2289657 agaatttgaagtaattgtagaagatgaagatgattc 2289622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 8201503 - 8201554
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  8201503 ttgtctcaaattatatgtcgctttacaataccaatgaaaaattaatgttact 8201554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 9961358 - 9961409
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  9961358 ttgtcccaaattatatgtcgttttacaataccaatgaaaaattaatgttact 9961409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 11172928 - 11172979
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  11172928 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 11172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 11615395 - 11615446
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  11615395 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 11615446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 13631301 - 13631250
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||||||||||    
T  13631301 ttgtctcaaattatatgtcgctttacaataccaatgaaaaattaatgttact 13631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 30510993 - 30510942
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  30510993 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttact 30510942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 31198072 - 31198135
Alignment:
Q  422 aatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatttg 485  Q
    |||||||||||||||||||||||     |||||||||||| ||||||||||||| | |||||||    
T  31198072 aatatatgtctatgtttcggcaaatttatactttacctttcattttgttttattcttatatttg 31198135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 5489638 - 5489676
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  5489638 tatgtcgttttacaataccaatgcaacattaatgttact 5489676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 582
Target Start/End: Complemental strand, 12278987 - 12278937
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| || ||||| ||| ||||||||||||||||||||||||| |||||    
T  12278987 tgtctctaattgtatctcactttacaataccaatgaaacattaattttact 12278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 12499696 - 12499658
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  12499696 tatgtcgttttacaataccaatgaaaaattaatgttact 12499658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 12507025 - 12506987
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  12507025 tatgtcgttttacaataccaatgaaaaattaatgttact 12506987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 12509205 - 12509243
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  12509205 tatgtcgttttacaataccaatgaaaaattaatgttact 12509243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 14304402 - 14304440
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  14304402 tatgtcgttttacaataccaatgaaaaattaatgttact 14304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 16970473 - 16970511
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  16970473 tatgtcgttttacaataccaatgcaacattaatgttact 16970511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 581
Target Start/End: Complemental strand, 35040073 - 35040023
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttac 581  Q
    ||||| |||| ||||||||  ||||||||||||||||| ||||||||||||    
T  35040073 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttac 35040023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 1228438 - 1228487
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  1228438 ttgtttcaaattgtatgtcactttacaatatcaataaaacattaatgtta 1228487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 6835755 - 6835804
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||| ||||||||||    
T  6835755 ttgtcccaaattgtatgtcactttagaataccaatgaaatattaatgtta 6835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 8493636 - 8493587
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  8493636 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 8493587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 9660464 - 9660415
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | ||||||  |||||||||||||||||||||||||||||    
T  9660464 ttgtcccaaattatatgtcgctttacaataccaatgaaacattaatgtta 9660415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 16465859 - 16465908
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| | |||||| |||||||||||||||| || ||||||||||    
T  16465859 ttgtctcaaattatatgtcgttttacaataccaatgcaatattaatgtta 16465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 19133675 - 19133634
Alignment:
Q  166 aagaatttgaagttattgtagaagatgaagatgattcaattt 207  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  19133675 aagaatttgaagttattggggaagatgaagaagattcaattt 19133634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 32142418 - 32142467
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||    
T  32142418 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgtta 32142467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 2010286 - 2010258
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  2010286 tttacaataccaatgaaacattaatgtta 2010258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 8415231 - 8415191
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  8415231 tgtatgtcgctttacaataccaatgaaaaattaatgttact 8415191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 27080559 - 27080523
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  27080559 tatgtcactttgcaataccaatgaaacattaatgtta 27080523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 30240260 - 30240300
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  ||||||||||||||||| |||||||||||||    
T  30240260 tgtatgtcgctttacaataccaatgaatcattaatgttact 30240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 17318267 - 17318391
Alignment:
Q  360 ttttatgtggtggacaaagcatcgacattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttacct 459  Q
    |||||| | ||| ||||| || |||||||||||||||||| |||| ||  ||||||| ||||||||||||| || ||||   || ||| |||||||||||    
T  17318267 ttttatattgtgtacaaaacaccgacattttacttggttattaatgttctgcatttattataaatatatgtttacgttttcacattaatgtactttacct 17318366  T
Q  460 tttattttgttttattttgatattt 484  Q
    || ||||||||||||| ||||||||    
T  17318367 ttcattttgttttattctgatattt 17318391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 17318095 - 17318166
Alignment:
Q  161 aaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacattttttt 233  Q
    |||||||||||||||||||||||  ||| || |||||||||||||||||||| ||| ||||||||| ||||||    
T  17318095 aaatgaagaatttgaagttattgcggaacat-aagatgattcaatttcattagatgaaatatgacactttttt 17318166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 13779810 - 13779759
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  13779810 ttgtctcaaattgtatgtcactttacaatatcaatgaaacattaatgttact 13779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 19715270 - 19715321
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  19715270 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 19715321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 28074500 - 28074449
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  28074500 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 28074449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 18203251 - 18203206
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  18203251 caaattgtatgtcactttacaataccaatgaaacattaatgttact 18203206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 21582960 - 21582911
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  21582960 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgtta 21582911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 25838711 - 25838662
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  25838711 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgtta 25838662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 30852017 - 30852066
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  30852017 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgtta 30852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 582
Target Start/End: Complemental strand, 31602996 - 31602901
Alignment:
Q  487 tactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| |||||| |||||| |||||||||||||         ||||| |||| | |||||| |||||||||||||||| |||||||||||||||    
T  31602996 tactccctccgtcccaaattgtatgtcgctttagggaaaaaaatttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgttact 31602901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 6796143 - 6796194
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  6796143 ttgtcccaaattgtatgtcactttacaataccaatgaaatattaatgttact 6796194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 16421903 - 16421954
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||||||||||||||||| |||||||||||||    
T  16421903 ttgtcccaaattgtatgtcactttacaataccaatgaatcattaatgttact 16421954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 16872598 - 16872547
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  16872598 ttgtcccaaattgtatgtcactttacaataccaatgaaatattaatgttact 16872547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 17341643 - 17341705
Alignment:
Q  161 aaatgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatga 224  Q
    |||||||||||||||||||||||  ||| || |||||||||||||||||||| ||| |||||||    
T  17341643 aaatgaagaatttgaagttattgcggaatat-aagatgattcaatttcattagatgaaatatga 17341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 537 - 580
Target Start/End: Original strand, 24333057 - 24333100
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  24333057 caaattgtatgtcactttacaataccaatgaaacattaatgtta 24333100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 24616559 - 24616610
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||| |||||    
T  24616559 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatattact 24616610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 29938333 - 29938384
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  29938333 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatgttact 29938384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 36652477 - 36652528
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||| ||||||||    
T  36652477 ttgtcccaaattgtatgtcactttacaataccaatgaaacatttatgttact 36652528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 39169028 - 39168977
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  39169028 ttgtcccaaattgtatgtcactttacaataccaatgaaaaattaatgttact 39168977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 42373245 - 42373194
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||  |||||||||||||||||| ||||||||||||    
T  42373245 ttgtctcaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 42373194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 12000523 - 12000572
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  12000523 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 12000572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 27667511 - 27667560
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  27667511 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 27667560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 38896697 - 38896648
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  38896697 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 38896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 5371594 - 5371634
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  5371594 tgtatgtcactttacaataccaataaaacattaatgttact 5371634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 6900104 - 6900068
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6900104 tatgtcattttacaataccaacgaaacattaatgtta 6900068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 24450571 - 24450611
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  24450571 tgtatgtcactttacaatatcaatgaaacattaatgttact 24450611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 24530125 - 24530089
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24530125 tatgtcattttacaataacaatgaaacattaatgtta 24530089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 26078843 - 26078891
Alignment:
Q  161 aaatgaagaatttgaagttattgtagaagatgaagatgattcaatttca 209  Q
    ||||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  26078843 aaatgaagaatttcaagttatagcggaagatgaagatgattcaatttca 26078891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 42192453 - 42192413
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  42192453 tgtatgtcactttagaataccaatgaaacattaatgttact 42192413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 600289 - 600238
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  600289 ttgtcccaaattgtatgtcgttttataataccaatgaaatattaatgttact 600238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 6878555 - 6878606
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||||||||| |||||| |||||    
T  6878555 ttgtcccaaattgtatgtcgttttacaataccaatgaaaaattaatattact 6878606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 7427408 - 7427357
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  7427408 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 7427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 11589032 - 11588981
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||||||||||||| ||||||||||||||||    
T  11589032 ttgtcacaaattatatgtcactttacaataccaataaaacattaatgttact 11588981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 14584851 - 14584800
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||| | |||||| ||||||||||||||||||| ||||||||||||    
T  14584851 ttgtcttaaattatatgtcgttttacaataccaatgaaatattaatgttact 14584800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 15225882 - 15225933
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  15225882 ttgtcccaaattatatgtcgttttacaataccaatgaaatattaatgttact 15225933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 18673411 - 18673462
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||| ||||||||||||||||||||||||||    
T  18673411 ttgtcccaaattatatgtcactttagaataccaatgaaacattaatgttact 18673462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 22578248 - 22578299
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||| ||||||||||||||||||||||||||    
T  22578248 ttgtcccaaattatatgtcactttagaataccaatgaaacattaatgttact 22578299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 27919664 - 27919613
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  27919664 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttact 27919613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 29949140 - 29949191
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||| ||||||||||||| ||||| ||||||||||||    
T  29949140 ttgtcccaaattgtatgtcgttttacaataccagtgaaaaattaatgttact 29949191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 30087966 - 30087915
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  30087966 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 30087915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 30526200 - 30526251
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  30526200 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 30526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 35544231 - 35544180
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  35544231 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 35544180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 39645947 - 39645896
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||  |||||||||||||||||| |||||| |||||    
T  39645947 ttgtctcaaattgtatgtcgctttacaataccaatgaaaaattaatattact 39645896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 40483770 - 40483821
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||| ||  | |||||||||||||||||||||||||||||||    
T  40483770 ttgtctcaaattgtctgctactttacaataccaatgaaacattaatgttact 40483821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 4135741 - 4135779
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  4135741 tgtatgtcactttacaataccagtgaaacattaatgtta 4135779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 20091203 - 20091165
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  20091203 tgtatgtcactttagaataccaatgaaacattaatgtta 20091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 24612899 - 24612937
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  24612899 tatgtcgttttacaataccaatgaaaaattaatgttact 24612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 581
Target Start/End: Complemental strand, 37954716 - 37954666
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttac 581  Q
    |||||||||| ||||||||| |||||| ||| ||||||| |||||||||||    
T  37954716 ttgtctcaaattgtatgtcactttacactacaaatgaaatattaatgttac 37954666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 42927169 - 42927207
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  42927169 tgtatgtcactttagaataccaatgaaacattaatgtta 42927207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 13429111 - 13429160
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | ||||||  |||||||||||||||||||||||||||||    
T  13429111 ttgtcccaaattatatgtcgctttacaataccaatgaaacattaatgtta 13429160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 23606232 - 23606277
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  23606232 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 23606277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 576
Target Start/End: Original strand, 26746871 - 26746916
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaat 576  Q
    |||||||||| | ||||||  |||||||||||||||||||||||||    
T  26746871 ttgtctcaaattatatgtcgctttacaataccaatgaaacattaat 26746916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 34908723 - 34908772
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||| ||||||||||    
T  34908723 ttgtcccaaattgtatgtcactttagaataccaatgaaatattaatgtta 34908772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 37505004 - 37505049
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| |||| |||||||||||||||||||||    
T  37505004 caaattgtatgtcactttataatatcaatgaaacattaatgttact 37505049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 37965069 - 37965024
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  37965069 caaattgtatatcactttacaatactaatgaaacattaatgttact 37965024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 39284245 - 39284290
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  39284245 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 39284290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 582
Target Start/End: Complemental strand, 40734935 - 40734886
Alignment:
Q  533 gtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| ||||||||  ||||||||||||||| ||| |||||||||||    
T  40734935 gtctcaaattgtatgtcgctttacaataccaatgcaactttaatgttact 40734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 41541218 - 41541169
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||||||||||||||| |||||||    
T  41541218 ttgtcccaaattgtatgtcactttagaataccaatgaaacataaatgtta 41541169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 4924461 - 4924497
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  4924461 tatgtcactttacaataccaatgcaacattaatgtta 4924497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 8378306 - 8378278
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  8378306 tttacaataccaatgaaacattaatgtta 8378278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 8738016 - 8738064
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    ||||| |||| ||||||||  ||||||||||||||||| ||||||||||    
T  8738016 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgtt 8738064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 9267692 - 9267728
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  9267692 tatgtcactttacaataccaatgcaacattaatgtta 9267728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 11714492 - 11714532
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  11714492 tgtatgtcgctttacaataccaatgaaaaattaatgttact 11714532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 15286598 - 15286550
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    ||||| |||| | |||||| |||||||||||||||| ||||||||||||    
T  15286598 ttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgtt 15286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 15466967 - 15466919
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    ||||| |||| | |||||| |||||||||||||||| ||||||||||||    
T  15466967 ttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgtt 15466919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 23897736 - 23897772
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  23897736 tatgtcactttacaataccaatgaaatattaatgtta 23897772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 38367666 - 38367626
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||| |||| |||||||||||||||||||||    
T  38367666 tgtatgtcactttagaatatcaatgaaacattaatgttact 38367626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 41256426 - 41256390
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  41256426 tatgtcgttttacaataccaatgaaatattaatgtta 41256390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 42946647 - 42946607
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  42946647 tgtatgtcgctttacaataccaatgaaaaattaatgttact 42946607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 42981247 - 42981287
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  42981247 tgtatgtcgctttacaataccaatgaaaaattaatgttact 42981287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 35080309 - 35080360
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  35080309 ttgtctcaaattgtatgtcattttagaataccaatgaaacattaatgttact 35080360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 582
Target Start/End: Complemental strand, 34381608 - 34381558
Alignment:
Q  532 tgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  34381608 tgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 34381558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 13978457 - 13978412
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  13978457 caaattgtatgtcactttacaataccaatgaaacattaatgttact 13978412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 4890165 - 4890125
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  4890165 tgtatgtcactttacaataccaatgaaacattaatgttact 4890125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 4456436 - 4456487
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||||||||||||||||||||||||||||||    
T  4456436 ttgtcccaaattatatgtcactttacaataccaatgaaacattaatgttact 4456487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 9246068 - 9246119
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  |||||||||||||||||||||||||||||||    
T  9246068 ttgtctcaaattatatgtcgctttacaataccaatgaaacattaatgttact 9246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 14153735 - 14153684
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  14153735 ttgtcccaaattgtatgtcactttaaaataccaatgaaacattaatgttact 14153684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 18473223 - 18473172
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||| ||| |||||||||||||||||||||||||||||||    
T  18473223 ttgtcccaaattgtatttcactttacaataccaatgaaacattaatgttact 18473172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 34163165 - 34163216
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  34163165 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 34163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 34607034 - 34606983
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  34607034 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 34606983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 37337068 - 37337119
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||| ||||||||||||||||||||    
T  37337068 ttgtcccaaattgtatgtcactttacaatacaaatgaaacattaatgttact 37337119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 6517642 - 6517597
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||    
T  6517642 caaattgtatgtcatttgacaatatcaatgaaacattaatgttact 6517597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 10164719 - 10164768
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||  |||||||||||||||||| ||||||||||    
T  10164719 ttgtctcaaattgtatgtcgctttacaataccaatgaaatattaatgtta 10164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 28377680 - 28377729
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| ||||| |||||||||||||||||||||||    
T  28377680 ttgtcccaaattgtatgtcactttacgataccaatgaaacattaatgtta 28377729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 29816247 - 29816296
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  29816247 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 29816296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 36487326 - 36487375
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||||| |||||||||||||||||| |||||||||||    
T  36487326 ttgtcccaaattgtatgtcgttttacaataccaatgaagcattaatgtta 36487375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 11130205 - 11130245
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  11130205 tgtatgtcgttttacaataccaatgaaaaattaatgttact 11130245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 21772873 - 21772837
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21772873 tatgtcactttacaataccaatgaaacattaatgtta 21772837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 4060813 - 4060766
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgt 578  Q
    ||||| |||| |||||||| |||||||||||||||||| |||||||||    
T  4060813 ttgtcccaaattgtatgtcgttttacaataccaatgaatcattaatgt 4060766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 580
Target Start/End: Original strand, 5288844 - 5288938
Alignment:
Q  486 ttactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||| |||||| |||||| |||||| ||||||         |||||||||| | ||||||  ||||||||||||||| |||||||||||||    
T  5288844 ttactccctccgtcccaaattgtatgtcgttttaggggaaaaaatttgtctcaaattatatgtcgctttacaataccaatgcaacattaatgtta 5288938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 9248971 - 9249022
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||| | ||||||| |||||||||||||||||| ||||||||||||    
T  9248971 ttgtcttaaattatatgtcactttacaataccaatgaaatattaatgttact 9249022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 12360830 - 12360881
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  12360830 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 12360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 15251412 - 15251443
Alignment:
Q  551 ttttacaataccaatgaaacattaatgttact 582  Q
    ||||||||||||||||||||||||||||||||    
T  15251412 ttttacaataccaatgaaacattaatgttact 15251443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 23991754 - 23991805
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  23991754 ttgtctcaaattatatgtcgctttacaataccaatgcaacattaatgttact 23991805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 28119089 - 28119058
Alignment:
Q  551 ttttacaataccaatgaaacattaatgttact 582  Q
    ||||||||||||||||||||||||||||||||    
T  28119089 ttttacaataccaatgaaacattaatgttact 28119058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 29619456 - 29619405
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  29619456 ttgtcccaaattatatgtcgttttacaataccaatgaaaaattaatgttact 29619405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 34382060 - 34382009
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||||| |||||    
T  34382060 ttgtcccaaattgtatgtcactttaaaataccaatgaaacattaatattact 34382009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 35288158 - 35288209
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  35288158 ttgtctcaaattatatgtcgctttacaataccaatgcaacattaatgttact 35288209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 36347445 - 36347394
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||| |||| |||| ||||||||||||||||||||||||||    
T  36347445 ttgtcccaaattgtacgtcactttagaataccaatgaaacattaatgttact 36347394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 39990433 - 39990390
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||    
T  39990433 caaattgtatgtcactttacaatatcaatgaaacattaatgtta 39990390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 40915652 - 40915601
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  40915652 ttgtcttaaattgtatgtcactttagaatactaatgaaacattaatgttact 40915601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 42940809 - 42940860
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  42940809 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 42940860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 10934978 - 10934940
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  10934978 tatgtcgttttacaataccaatgaaatattaatgttact 10934940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 25538096 - 25538134
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  25538096 tatgtcgttttacaataccaatgtaacattaatgttact 25538134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 25784758 - 25784720
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  25784758 tgtatgtcactttagaataccaatgaaacattaatgtta 25784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Original strand, 6923068 - 6923105
Alignment:
Q  543 gtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  6923068 gtatgtcactttacaatactaatgaaacattaatgtta 6923105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 576
Target Start/End: Original strand, 7414658 - 7414703
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaat 576  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||    
T  7414658 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaat 7414703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 8042587 - 8042542
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  8042587 caaattgtatgtcgctttacaataccaatgaaaaattaatgttact 8042542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 29000944 - 29000903
Alignment:
Q  541 ctgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| |||| |||||||||| |||||||||||||||    
T  29000944 ctgtatgtcactttagaataccaatggaacattaatgttact 29000903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 31153155 - 31153122
Alignment:
Q  163 atgaagaatttgaagttattgtagaagatgaaga 196  Q
    ||||||||||||||||||||| ||||||||||||    
T  31153155 atgaagaatttgaagttattgaagaagatgaaga 31153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 39410650 - 39410605
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  39410650 caaattgtatgtcactttagaatactaatgaaacattaatgttact 39410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 3099264 - 3099224
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  3099264 tgtatgtcactttacgataccaattaaacattaatgttact 3099224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 13970981 - 13971049
Alignment:
Q  164 tgaagaatttgaagttattgtagaagatgaagatgattcaatttcattaaatggaatatgacatttttt 232  Q
    ||||||||| |||| | |||| ||| ||  |||||||| |||||||||| ||||||||||||| |||||    
T  13970981 tgaagaattcgaagatcttgtggaacatttagatgatttaatttcattagatggaatatgacacttttt 13971049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 27293526 - 27293486
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  27293526 tgtatgtcgctttacaataccaatgaaaaattaatgttact 27293486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 582
Target Start/End: Complemental strand, 4262 - 4167
Alignment:
Q  487 tactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| |||||| |||||| |||||||||||||         |||| ||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  4262 tactccctccgtcccaaattgtatgtcgctttaggaaaaaaaaattgtttcaaattgtatgtcactttacaatatcaatgaaacattaatgttact 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 30744895 - 30744946
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  30744895 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 30744946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 31786838 - 31786889
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  31786838 ttgtcccaaattgtatgtcactttacaataccaatgaaacattaatgttact 31786889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 40164262 - 40164211
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  40164262 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgttact 40164211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 536 - 582
Target Start/End: Complemental strand, 27039115 - 27039069
Alignment:
Q  536 tcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27039115 tcaaattgtatgtcactttacaataccaatgaaacattaatgttact 27039069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 8104273 - 8104322
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  8104273 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgtta 8104322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 8120188 - 8120289
Alignment:
Q  384 acattttacttggttaataatatttcgcatttaatataaatatatgtctatgtttcggcaataaagtactttaccttttattttgttttattttgatatt 483  Q
    ||||||||||  |||| |||| |||| |||||| ||||||||||||| || |||||| || ||| |||||||| | || |||| |||||||| |||||||    
T  8120188 acattttactcagttattaatgtttcacatttattataaatatatgtttaagtttcgacattaatgtactttatcattgatttcgttttattctgatatt 8120287  T
Q  484 tg 485  Q
    ||    
T  8120288 tg 8120289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 24978872 - 24978921
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  24978872 ttgtctcaaattgtatgtcactttagaataccaatgaaacattaatgtta 24978921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 52679820 - 52679775
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  52679820 caaattgtatgtcactttacaataccaatgaaacattaatgttact 52679775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 54103981 - 54103936
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  54103981 caaattgtatgtcactttacaataccaatgaaacattaatgttact 54103936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 3671619 - 3671568
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||||||    
T  3671619 ttgtcccaaattgtatgtcacgttacaataccaatgaaacattaatgttact 3671568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 16661508 - 16661457
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||||||| |||||||||||||||||||||| || |||||    
T  16661508 ttgtctcaaattgtatgtcactttacaataccaatgaaacatttattttact 16661457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 23782108 - 23782159
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  23782108 ttgtctcaaattgtatatcactttacattaccaatgaaacattaatgttact 23782159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 42490084 - 42490135
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  42490084 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 42490135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 19961064 - 19961015
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||||||    
T  19961064 ttgtcacaaattgtatgtcgttttacaataccaatgaaaaattaatgtta 19961015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 21216905 - 21216856
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  21216905 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 21216856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 32078062 - 32078111
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | |||||| ||||||||||||||||||||||||||||||    
T  32078062 ttgtcccaaattatatgtcgttttacaataccaatgaaacattaatgtta 32078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 32100320 - 32100271
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  32100320 ttgtctcaaattgtacgtcactttagaataccaatgaaacattaatgtta 32100271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 48910578 - 48910529
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  48910578 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 48910529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 21272627 - 21272722
Alignment:
Q  486 ttactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||| |||||| |||||| |||||||||||||         |||||||||| ||||||||  ||||||||||||||| ||| |||||||||||    
T  21272627 ttactccctccgtcccaaattgtatgtcgctttagggaaaaaat-ttgtctcaaattgtatgtcgctttacaataccaatgcaactttaatgttact 21272722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 39144632 - 39144596
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| ||||||||||||||||||||||||||||||    
T  39144632 tatgtcgttttacaataccaatgaaacattaatgtta 39144596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 5137704 - 5137661
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  5137704 caaattgtatgtcactttagaataccaatgaaacattaatgtta 5137661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 8096843 - 8096792
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| |||||||||| |||||||||||||||||||||    
T  8096843 ttgtcccaaattatatgtcgttttacaatagcaatgaaacattaatgttact 8096792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 17378214 - 17378265
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  17378214 ttgtcgcaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 17378265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 23609472 - 23609421
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  23609472 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 23609421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 28686401 - 28686350
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| |||| |||| |||| ||||||||||||||||||||||||||    
T  28686401 ttgtcccaaattgtacgtcactttagaataccaatgaaacattaatgttact 28686350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 29227409 - 29227358
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  29227409 ttgtcccaaattgtatgtcactttacaatatcaatgaaacataaatgttact 29227358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 30190366 - 30190417
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  30190366 ttgtcccaaattatatgtcgttttacaataccaatgaaaaattaatgttact 30190417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 30358761 - 30358812
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  30358761 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 30358812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 31170427 - 31170478
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  31170427 ttgtcccaaattgtatgtcgctttacaataccaatgaatcattaatgttact 31170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 33593190 - 33593139
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| ||||| |||||||||| |||||||||||||||    
T  33593190 ttgtctcaaaatttatgtcgttttaaaataccaatgcaacattaatgttact 33593139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 33600321 - 33600270
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||||||| | |||||| ||||| |||||||||| |||||||||||||||    
T  33600321 ttgtctcaaaatttatgtcgttttaaaataccaatgcaacattaatgttact 33600270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 33840039 - 33839988
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  33840039 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 33839988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Complemental strand, 34817143 - 34817092
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  34817143 ttgtcccaaattatatgtcgttttacaataccaatgaaatattaatgttact 34817092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 38096083 - 38096122
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttac 581  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  38096083 tgtatgtcgttttacaataccaatgaaaaattaatgttac 38096122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 40643359 - 40643410
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  40643359 ttgtcccaaattgtatgtcactttagaataccaataaaacattaatgttact 40643410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 41751144 - 41751195
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  41751144 ttgtcccaaattatatgtcgttttacaataccaatgaaaaattaatgttact 41751195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 44976344 - 44976395
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||| | ||||| |||||||||||||||||||| ||||||||||||    
T  44976344 ttgtttcaaattatatgttattttacaataccaatgaaatattaatgttact 44976395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 47054039 - 47054090
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||||    
T  47054039 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgttact 47054090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 49818321 - 49818372
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | |||||| |||||||||||||||| |||||||||||||||    
T  49818321 ttgtcccaaattatatgtcgttttacaataccaatgcaacattaatgttact 49818372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 582
Target Start/End: Original strand, 52262283 - 52262318
Alignment:
Q  547 gtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| |||||||||||||||||||||||||||||||    
T  52262283 gtcactttacaataccaatgaaacattaatgttact 52262318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 335917 - 335879
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  335917 tatgtcgttttacaataccaatgcaacattaatgttact 335879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 2929917 - 2929879
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2929917 tgtatgtcactttagaataccaatgaaacattaatgtta 2929879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 32852185 - 32852155
Alignment:
Q  552 tttacaataccaatgaaacattaatgttact 582  Q
    |||||||||||||||||||||||||||||||    
T  32852185 tttacaataccaatgaaacattaatgttact 32852155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 42939801 - 42939763
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  42939801 tatgtcactttacaataccaatgaagcattaatgttact 42939763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 46195853 - 46195815
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  46195853 tatgtcactttagaataccaatgaaacattaatgttact 46195815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 576
Target Start/End: Complemental strand, 240712 - 240667
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaat 576  Q
    ||||| |||| ||||||||| |||||||||| ||||||||||||||    
T  240712 ttgtcccaaattgtatgtcactttacaatactaatgaaacattaat 240667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 21817581 - 21817532
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||| ||||| | |||||| |||||| |||||||||||||||||||||||    
T  21817581 ttgtttcaaattatatgtcgttttaccataccaatgaaacattaatgtta 21817532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 27848918 - 27848873
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  27848918 caaattgtatgtcactttagaataccaataaaacattaatgttact 27848873  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 28227014 - 28227063
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| ||||  |||||||||||||||||||||||    
T  28227014 ttgtcccaaattgtatgtcactttaggataccaatgaaacattaatgtta 28227063  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 38808130 - 38808179
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||||||||||    
T  38808130 ttgtcccaaattatatgtcgttttacaataccaatgaaatattaatgtta 38808179  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 38999487 - 38999536
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| |||| |||||||||||||||||||    
T  38999487 ttgtcccaaattgtatgtcactttagaatatcaatgaaacattaatgtta 38999536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 42662691 - 42662646
Alignment:
Q  537 caaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||    
T  42662691 caaattgtatgtcgctttacaataccaatgaatcattaatgttact 42662646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 47241205 - 47241254
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| |||||| || ||||||||| |||||||||||||||||||    
T  47241205 ttgtcccaaattgtatgccactttacaatatcaatgaaacattaatgtta 47241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 5925355 - 5925391
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| |||||||||||||||| |||||||||||||    
T  5925355 tatgtcgttttacaataccaatgcaacattaatgtta 5925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 19602225 - 19602265
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| ||| |||||||||||||| ||||||||||||||||    
T  19602225 tgtatatcactttacaataccaataaaacattaatgttact 19602265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 37331414 - 37331378
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| |||||||||||||||| |||||||||||||    
T  37331414 tatgtcgttttacaataccaatgcaacattaatgtta 37331378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Original strand, 39290600 - 39290628
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  39290600 tttacaataccaatgaaacattaatgtta 39290628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 48584112 - 48584072
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  48584112 tgtatgtcgctttacaataccaatgaaatattaatgttact 48584072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 51166500 - 51166472
Alignment:
Q  552 tttacaataccaatgaaacattaatgtta 580  Q
    |||||||||||||||||||||||||||||    
T  51166500 tttacaataccaatgaaacattaatgtta 51166472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 54080338 - 54080298
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| ||| |||| ||||||||||||||||||||||||||    
T  54080338 tgtatatcactttagaataccaatgaaacattaatgttact 54080298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 576
Target Start/End: Original strand, 54677670 - 54677702
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaat 576  Q
    |||||| ||||||||||||||||||||||||||    
T  54677670 tatgtcgttttacaataccaatgaaacattaat 54677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 582
Target Start/End: Complemental strand, 6183 - 6088
Alignment:
Q  487 tactcccaccgtcctaaattgcatgtcgctttaggnnnnnnnnnttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||| || |||||||||| |||||||||||||         |||||||||| | ||||||  ||||||||||||||| |||||||||||||||    
T  6183 tactccctccatcctaaattgtatgtcgctttagggaaaaaaatttgtctcaaattatatgtcgctttacaataccaatgtaacattaatgttact 6088  T

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Target: scaffold0427 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 5274 - 5325
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  5274 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgttact 5325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 25999 - 25950
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||||||||    
T  25999 ttgtcccaaattgtatgtcactttagaataccaatgaaacattaatgtta 25950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 18363 - 18315
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtt 579  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||||    
T  18363 ttgtctcaaattgtatgtcactttataataccaatgaaatattaatgtt 18315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 98905 - 98956
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| | ||||||| |||| ||||||||||||||||||||||||||    
T  98905 ttgtcccaaattatatgtcactttagaataccaatgaaacattaatgttact 98956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 524334 - 524385
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||| |||| ||||||||| |||| ||||||||||||||| ||||||||||    
T  524334 ttgtcccaaattgtatgtcactttagaataccaatgaaacaataatgttact 524385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 41700 - 41738
Alignment:
Q  165 gaagaatttgaagttattgtagaagatgaagatgattca 203  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  41700 gaagaatttgaagttattgcggaagatgaagatgattca 41738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 63387 - 63436
Alignment:
Q  531 ttgtctcaaactgtatgtcattttacaataccaatgaaacattaatgtta 580  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||||    
T  63387 ttgtcccaaattgtatgtcgctttacaataccaatgaaaaattaatgtta 63436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 1501 - 1537
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  1501 tatgtcgttttacaataccaatgaaaaattaatgtta 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 7263 - 7299
Alignment:
Q  544 tatgtcattttacaataccaatgaaacattaatgtta 580  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  7263 tatgtcgttttacaataccaatgaaatattaatgtta 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 13927 - 13887
Alignment:
Q  542 tgtatgtcattttacaataccaatgaaacattaatgttact 582  Q
    ||||||||| |||||||||| |||||||| |||||||||||    
T  13927 tgtatgtcactttacaatacaaatgaaacgttaatgttact 13887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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