View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18927_high_6 (Length: 435)
Name: NF18927_high_6
Description: NF18927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18927_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 7 - 420
Target Start/End: Original strand, 1935797 - 1936210
Alignment:
| Q |
7 |
cttctagggatggtccacactttatctaaagaaaaatatctgaaaacaagaaccgcaaatcctttaaaagtaagtccacggtgatccaccgttcatagaa |
106 |
Q |
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| T |
1935797 |
cttctagggatggtccacactttatctaaagaaaaatatctgaaaacaagaaccgcaaatcctttaaaagtaagtccacggtgatccaccgttcatagaa |
1935896 |
T |
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| Q |
107 |
aatcacgcacagatctcaatacaaatggatattctcttccatgaaacggagtctcgaaaaatcttgcctgtcagaaaacatttttaataatgtcaggaat |
206 |
Q |
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| T |
1935897 |
aatcacgcacagatctcaatacaaatggatattctcttccatgaaacggagtctcgaaaaatcttgcctgtcagaaaacatttttaataatgtcaggaat |
1935996 |
T |
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| Q |
207 |
atcaaagctaaatggtgtacttcaataataaacatgcaatagaaaaattaacctgaaaacgacttaattatgcaaagttaaggccaccattcgcgtcaag |
306 |
Q |
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| T |
1935997 |
atcaaagctaaatggtgtacttcaataataaacatgcaatagaaaaattaacctgaaaacgacttaattgtgcaaagttaaggccaccatccgcgtcaag |
1936096 |
T |
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| Q |
307 |
gtcacatgaattaaaaatttgatgtaaaactcccctaaacttaggcgtaaaatcaattctgctattctcatggaaaaacttgcgaagctacaaaaattta |
406 |
Q |
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| T |
1936097 |
gtcacatgaattaaaaatttgatgtaaaactcccctaaacttaggcgtaaaatcaattctgctattctcatggaaaaacttgcgaagctacaaaaatgta |
1936196 |
T |
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| Q |
407 |
aattaagttataat |
420 |
Q |
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| T |
1936197 |
aattaagttataat |
1936210 |
T |
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