View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18927_low_2 (Length: 976)
Name: NF18927_low_2
Description: NF18927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18927_low_2 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 689; Significance: 0; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 689; E-Value: 0
Query Start/End: Original strand, 1 - 962
Target Start/End: Complemental strand, 11860505 - 11859523
Alignment:
| Q |
1 |
tccaagcacccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
100 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11860505 |
tccaagcatccctctaagtcaagatgattgaggcaactcaaatcgtccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
11860406 |
T |
 |
| Q |
101 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11860405 |
gcaagtggataagatttgttatgcaactaggaagcttctctatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
11860306 |
T |
 |
| Q |
201 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttttcacaagttgatgttgtcacctttacctca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11860305 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttatcacaagttgatgttgtcacctttacctcg |
11860206 |
T |
 |
| Q |
301 |
tgcggaagctgagggttgttaatgttgtatggcaaaagaatggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgtaagatcta |
400 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11860205 |
tacggaagccgagggttgttaatgttgtatggcaaaagaaaggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgaaagatcta |
11860106 |
T |
 |
| Q |
401 |
aagcaaaatcgaatgaaactcgtagcattccatcttgaactctttcccgcatcacatccatggtgatgttttcgttaccagtgatttcttgcgttgcgag |
500 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
11860105 |
aagcaaaatcgaacgaaactcgcagcattccatcttgaaccctttcccccatcacatccacggtgatgttttcgttaccagcgatttcttgccttgcgag |
11860006 |
T |
 |
| Q |
501 |
tttatgcatcaaccgattcattctatataagtag---------ttgttcctcacaacaccgcagtactgatggtggtcactttcttttttcgctttatgg |
591 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||| | ||| ||||||||||| || ||||| |||| |
|
|
| T |
11860005 |
tttatgcatcaacggattcattctatacaagcagttgttcatattgttcctcacaacaccgcagtaccggaggtagtcactttcttcttccgcttgatgg |
11859906 |
T |
 |
| Q |
592 |
aaaaccagaggaacgaagtcttcgaaacaagcttgaccaaattgttgttctgggttgacaagaaacccttcagcagtccagagttgaattaatctctctg |
691 |
Q |
| |
|
||||||| |||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
11859905 |
aaaaccaaaggaacaaagtctttgaaacaagcttgaccaaattgttgttctggattgataagaaacccttcagccgtccagagttgaatcaatctctctg |
11859806 |
T |
 |
| Q |
692 |
catcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataacttctgataagtgggaaaattgtcgtaatagataaacttaagcatttccat |
791 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |
|
|
| T |
11859805 |
catcaatcaaataatcttctggaaacaatgaacaatatgcgaagcataacttctgataagtgggaaggttgtcgtaatagataaacttaagcgtttctaa |
11859706 |
T |
 |
| Q |
792 |
tgcttctggaatccagttgtc------accaccaccaccactttgcttcatcatcaacgtcgctacgatcacaatcaaaagaggaactccaccacaaccc |
885 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11859705 |
tgctttcggaatccagttgtcaccacgaccaccaccaccactttgcttcttcattaccatcgctacgatcacaatcaaaagaggaactccagcacaacct |
11859606 |
T |
 |
| Q |
886 |
tccacgatctcccgttcatgttca------ggttcaatggtgctttgttcttttttggctgaagtaattggtccatgaatctg |
962 |
Q |
| |
|
||||| |||||||||||| ||||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
11859605 |
tccacaatctcccgttcaggttcacgttcgggttcagtggtgctttgcacttttttggttgaagtaattggtccatgaatctg |
11859523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 1 - 881
Target Start/End: Complemental strand, 11828370 - 11827481
Alignment:
| Q |
1 |
tccaagcacccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
100 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |
|
|
| T |
11828370 |
tccaagcatccatctaagtcaagatggttaaggcaactcaaatcatccatgtcttttggcaattctttgaggacatgacatcgagacagtttcaacgttt |
11828271 |
T |
 |
| Q |
101 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11828270 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgtgaaagatctagatacctcaagtacttcacatcctcaatagagcttgg |
11828171 |
T |
 |
| Q |
201 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttttcacaagttgatgttgtcacctttacctca |
300 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
11828170 |
aactgtcttgatccccaagtcatgtagatccaacacgcgtagcgagtacttgaaggtgtcgaagatcttatcacaagttgacgttgtcatctttacctcg |
11828071 |
T |
 |
| Q |
301 |
tgcggaagctgagggttgttaatgttgtatggcaaaagaatggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgtaagatcta |
400 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
11828070 |
tgcggaagacgagggttgttaatgttgtatggcaaaagaatggtccttagtttctttgctgtctgaaacaccgaatcagggatctcacatgaaagatcta |
11827971 |
T |
 |
| Q |
401 |
aagcaaaatcgaatgaaactcgtagcattccatcttgaactctttcccgcatcacatccatggtgatgttttcgttaccagtgatttcttgcgttgcgag |
500 |
Q |
| |
|
||||||||| ||| |||||||| ||| | || | ||||||| |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||| |
|
|
| T |
11827970 |
aagcaaaattgaacgaaactcgcagcgtcccgccacgaactctctcccccatcacatccacggtgatgttttcgtcaccagcaatttcttgtcttgcgag |
11827871 |
T |
 |
| Q |
501 |
tttatgcatcaaccgattcattctatataagta---------gttgttcctcacaacaccgcagtactgatggtggtcactttcttttttcgctttatgg |
591 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || ||||| |||| |
|
|
| T |
11827870 |
tttatgcattaaccgattcattctatataagtagttgttcatgttgttcctcacaacaccgcagtacttctggtggtcactttcttcttccgcttgatgg |
11827771 |
T |
 |
| Q |
592 |
aaaaccagaggaacgaagtcttcgaaacaagcttgaccaaattgttgttctgggttgacaagaaacccttcagcagtccagagttgaattaatctctctg |
691 |
Q |
| |
|
||||||| |||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
11827770 |
aaaaccaaaggaacaaagtcttcgaaacaagcatgaccaaattgttgttctggattgataagaaacccttcaccagtccagagttgaatcaatctctctg |
11827671 |
T |
 |
| Q |
692 |
catcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataacttctgataagtgggaaaattgtcgtaatagataaacttaagcatttccat |
791 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||| | | |||| | |
|
|
| T |
11827670 |
catcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataatttctgataagtgggaagatcgtcgtaatagataagcttcaccttttctag |
11827571 |
T |
 |
| Q |
792 |
tgcttctggaatccagttgtcaccaccaccaccactttgcttcatcatcaacgtcgctacgatcacaatcaaaagaggaactccaccaca |
881 |
Q |
| |
|
|||||| ||||||| | ||||||||| ||||||| |||||| |||||| | | || |||||||| |||||||| || || |||||||| |
|
|
| T |
11827570 |
tgcttcccgaatccattcttcaccaccaacaccactatgcttcgtcatcacctttgcaacgatcactatcaaaagggggaccccaccaca |
11827481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 1 - 774
Target Start/End: Complemental strand, 12039270 - 12038482
Alignment:
| Q |
1 |
tccaagcacccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| |||| |
|
|
| T |
12039270 |
tccaagcatccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgagaaaatgacattgagaaagtttcaacgttt |
12039171 |
T |
 |
| Q |
101 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
200 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
12039170 |
gcaagtggataagagttgtgatgcaactaggaagcttctctatgttgttatgagaaagatctagatacctcaagtacttcacctcttcaatagagctcgg |
12039071 |
T |
 |
| Q |
201 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttttcacaagttgatgttgtcacctttacctca |
300 |
Q |
| |
|
|| ||||||||||||||| ||||| | ||| |||||||| | ||| |||||||||| |||||||| ||||| ||||||||||||| || |||||| |
|
|
| T |
12039070 |
aatcgtcttgatccccaagtcatgcatatctaacacgcgca--tagc-tttgaaggtgttaaagatcttatcacaggttgatgttgtcatctgtacctcg |
12038974 |
T |
 |
| Q |
301 |
tgcggaagctgagggttgttaatgttgtatggcaaaagaatggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgtaagatcta |
400 |
Q |
| |
|
| |||||| ||||||||| | ||||||||||||||||||||||||| ||||| || ||||||| |||||| |||| |||||| |||| | ||||| |
|
|
| T |
12038973 |
tcaggaagccgagggttgtcagtgttgtatggcaaaagaatggtcctcagttttttagctttctcaaacacacaatctgggatcccacacaacaaatcta |
12038874 |
T |
 |
| Q |
401 |
aagcaaaatcgaatgaaactcgtagcattccatcttgaactctttcccgcatcacatccatggtgatgttttcgttac---cagtgatttcttgcgttgc |
497 |
Q |
| |
|
||||| |||| || |||||||||||||||||||| ||||| | |||| |||| ||||| |||||||||||| || | || | || || |||| |
|
|
| T |
12038873 |
aagcataatcaaacgaaactcgtagcattccatcgtgaacaccctcccccatcgaatccacggtgatgttttcacgactgtcgatggtgactagccttgc |
12038774 |
T |
 |
| Q |
498 |
gagtttatgcatcaaccgattcattctatataagta---gttgttcctcacaacaccgcagtactgatggtggtcactttcttttttcgctttatggaaa |
594 |
Q |
| |
|
||||||||||| ||| | || |||||||||||||| |||||| |||||||||| | ||| |||| || |||||| || | ||| ||| ||| |
|
|
| T |
12038773 |
aagtttatgcattaacgggtttattctatataagtagttgttgtttgtcacaacaccaccgta---ttggttttcgttttcttcttccacttgatgaaaa |
12038677 |
T |
 |
| Q |
595 |
accagaggaacgaagtcttcgaaacaagcttgaccaaattgttgttctgggtt----------gaca-----agaaacccttcagcagtccagagttgaa |
679 |
Q |
| |
|
|||| |||||| ||||| | |||||||||| ||||||||||||||||||| || || | ||||| |||||||| ||||| ||||||| |
|
|
| T |
12038676 |
accaaaggaacaaagtcgttgaaacaagctcgaccaaattgttgttctggattgttgtttgaggaaattgttagaaatccttcagccgtccaaagttgaa |
12038577 |
T |
 |
| Q |
680 |
ttaatctctctgcatcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataacttctgataagtgggaaaattgtcgtaatagata |
774 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||||||||||| |
|
|
| T |
12038576 |
ttaatctctcggcatcaattaaataatcttctggaaacaatgaacaatatgcaaagcacaacttctgatacgtgggaagatcttcgtaatagata |
12038482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 1 - 528
Target Start/End: Original strand, 11902052 - 11902573
Alignment:
| Q |
1 |
tccaagcacccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
100 |
Q |
| |
|
|||| ||| ||||| | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| || | ||||||||||| |
|
|
| T |
11902052 |
tccaggcatccctcaatgtcaagatggttgaggcaactcaggccatccaagtcttttggcaattccttgaggatgtgacattgtgataatttcaatgttt |
11902151 |
T |
 |
| Q |
101 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
200 |
Q |
| |
|
||||||||||||| || || ||| ||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | || |
|
|
| T |
11902152 |
gcaagtggataagcttagtgatggaactaggtagcttttctatgttgttatgagaaagatctagatacctcaagtacttcacctcctcaatagatgttgg |
11902251 |
T |
 |
| Q |
201 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttttcacaagttgatgttgtcacctttacctca |
300 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||| ||| ||||| | |||||||||||| ||||||||| || || ||||||||||||| ||| ||||| |
|
|
| T |
11902252 |
aaccatcttaatccccaagtcatgtagatccagcacacgtag---ggacttgaaggtgttgaagatcttatcgcatgttgatgttgtcatcttcacctcg |
11902348 |
T |
 |
| Q |
301 |
tgcggaagctgagggttgttaatgttgtatggcaaaagaatggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgtaagatcta |
400 |
Q |
| |
|
|| ||||| ||||||||||| || |||| |||||||||||||| || |||||||||||||| | |||| ||| || |||||| |||||| ||||| | |
|
|
| T |
11902349 |
tgtggaaggcgagggttgttagtgctgtacggcaaaagaatggttctcagtttctttgctttatcgaacaacaagtctgggatcccacatgacagatcca |
11902448 |
T |
 |
| Q |
401 |
aagcaaaatcgaatgaaactcgtagcattccatcttgaactctttcccgcatcacatccatggtgatgttttcgttaccagtgatttcttgcgttgcgag |
500 |
Q |
| |
|
|||||||||| |||||| |||| | ||||||| ||| |||| | |||| |||| || || || |||||||| | || |||| || || ||||||| |
|
|
| T |
11902449 |
aagcaaaatcaaatgaagctcgcaacattccacctttaactttatcccccatcgaattcacagtcatgttttcttcacaggtga---ctagccttgcgag |
11902545 |
T |
 |
| Q |
501 |
tttatgcatcaaccgattcattctatat |
528 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
11902546 |
tttatgcattaaccgattcattctatat |
11902573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 446
Target Start/End: Complemental strand, 11732150 - 11731708
Alignment:
| Q |
1 |
tccaagcacccctctaagtcaagatggttgaggcaactcaaatcatccatgtcttttggcaattccttgaggacatgacattgagacagtttcaatgttt |
100 |
Q |
| |
|
|||||||| ||||| | || ||||||| |||||| | ||| ||| | || |||||||||||||||||||||||||||||| | || |||||||| |||| |
|
|
| T |
11732150 |
tccaagcaaccctcaatgttaagatggctgaggcgagtcagatccttcaagtcttttggcaattccttgaggacatgacagtaggagagtttcaaggttt |
11732051 |
T |
 |
| Q |
101 |
gcaagtggataagatttgttatgcaactaggaagcttctccatgttgttatgggaaagatctagatacctcaagtacttcacatcctcaatagagctcgg |
200 |
Q |
| |
|
|||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||| |||||||||||| | || |
|
|
| T |
11732050 |
gcaaatggataagctttgtgatgcaactaggaagcttctctatgttgttgtgggatagatctagaaacctcaagtatttcatctcctcaatagaggttgg |
11731951 |
T |
 |
| Q |
201 |
aaccgtcttgatccccaaatcatgtagatccaacacgcgtagcgagcacttgaaggtgtcgaagatcttttcacaagttgatgttgtcacctttacctca |
300 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||| || | |||||||||||| ||||||||| ||||| |||| || |||| ||| ||||| |
|
|
| T |
11731950 |
tacaatcttgatccccaagtcatgtagatccaacacg---tgcatggacttgaaggtgttgaagatcttatcacaggttggcgtcgtcatcttcacctcg |
11731854 |
T |
 |
| Q |
301 |
tgcggaagctgagggttgttaatg---ttgtatggcaaaagaatggtccttagtttctttgctttctgaaacaccaaatcagggatctcacatgtaagat |
397 |
Q |
| |
|
|| |||||| |||||||||||||| ||||||||||| | ||||||||| |||||||||||| | ||||| | |||| || ||| |||| | ||||| |
|
|
| T |
11731853 |
tgtggaagccgagggttgttaatgtttttgtatggcaataaaatggtcctcagtttctttgctat---aaacatcgaatctggaatcccacacgaaagat |
11731757 |
T |
 |
| Q |
398 |
ctaaagcaaaatcgaatgaaactcgtagcattccatcttgaactctttc |
446 |
Q |
| |
|
| ||| ||||||| || ||| |||| |||||||| |||| |||| |||| |
|
|
| T |
11731756 |
ccaaaccaaaatcaaacgaagctcgcagcattccttcttcaactttttc |
11731708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 589 - 743
Target Start/End: Original strand, 11902616 - 11902770
Alignment:
| Q |
589 |
tggaaaaccagaggaacgaagtcttcgaaacaagcttgaccaaattgttgttctgggttgacaagaaacccttcagcagtccagagttgaattaatctct |
688 |
Q |
| |
|
|||||||||| ||||| ||||| | |||||||| | ||| ||||||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
11902616 |
tggaaaaccaacggaacaaagtcattgaaacaaggtcgacaaaattgttgttgtggaatggtgagaaatccttcagcagtccagagttcaattaatctct |
11902715 |
T |
 |
| Q |
689 |
ctgcatcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataactt |
743 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
11902716 |
cagcatcaatcaaataatctcttggaaacaatgaacaatatgcaaaacataactt |
11902770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 658 - 737
Target Start/End: Complemental strand, 11731508 - 11731429
Alignment:
| Q |
658 |
ccttcagcagtccagagttgaattaatctctctgcatcaatcaaataatcttctggaaacaatgaacaatatgcaaagca |
737 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||| |
|
|
| T |
11731508 |
ccttcagcaaaccaaagttgaattaatctctcggcatcaatcaaatgatgttctggaaacaatgaacaaaatgcaaagca |
11731429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 653 - 747
Target Start/End: Original strand, 11974974 - 11975068
Alignment:
| Q |
653 |
gaaacccttcagcagtccagagttgaattaatctctctgcatcaatcaaataatcttctggaaacaatgaacaatatgcaaagcataacttctga |
747 |
Q |
| |
|
|||| ||||| || ||| |||| |||||||||||||| |||||||||||| ||||| ||||||||||||||| || |||| || ||||||||| |
|
|
| T |
11974974 |
gaaatccttctgctgtcaagagatgaattaatctctcgacatcaatcaaatgatcttgaggaaacaatgaacaaaattcaaaacaaaacttctga |
11975068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 910 - 962
Target Start/End: Complemental strand, 11827434 - 11827382
Alignment:
| Q |
910 |
ggttcaatggtgctttgttcttttttggctgaagtaattggtccatgaatctg |
962 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
11827434 |
ggttcgatggtgctttgtgcttttttggttgaagtaattggtccataaatctg |
11827382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 892
Target Start/End: Original strand, 11902866 - 11902943
Alignment:
| Q |
815 |
caccaccaccactttgcttcatcatcaacgtcgctacgatcacaatcaaaagaggaactccaccacaaccctccacga |
892 |
Q |
| |
|
|||||||| ||||||| ||| |||||||| | |||||| |||||||| |||||| |||||||||||| ||| ||||| |
|
|
| T |
11902866 |
caccaccagcactttggttcttcatcaacattgctacggtcacaatcgcaagagggactccaccacaatccttcacga |
11902943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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