View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18927_low_7 (Length: 455)

Name: NF18927_low_7
Description: NF18927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18927_low_7
NF18927_low_7
[»] chr8 (9 HSPs)
chr8 (21-448)||(10683099-10683526)
chr8 (288-396)||(44912966-44913074)
chr8 (288-426)||(43811260-43811398)
chr8 (288-426)||(201461-201599)
chr8 (288-426)||(316298-316436)
chr8 (288-426)||(30409580-30409718)
chr8 (339-426)||(28647153-28647240)
chr8 (288-426)||(1287569-1287707)
chr8 (339-426)||(41946058-41946145)
[»] chr5 (9 HSPs)
chr5 (207-412)||(16598070-16598275)
chr5 (288-426)||(12019531-12019669)
chr5 (288-426)||(37659469-37659607)
chr5 (339-426)||(10275279-10275366)
chr5 (288-426)||(7103151-7103289)
chr5 (288-426)||(16794911-16795049)
chr5 (207-424)||(30048062-30048276)
chr5 (288-391)||(40371024-40371127)
chr5 (288-426)||(30696038-30696176)
[»] chr3 (6 HSPs)
chr3 (288-426)||(43548457-43548595)
chr3 (288-406)||(22931084-22931202)
chr3 (288-426)||(54171121-54171259)
chr3 (339-426)||(21847870-21847957)
chr3 (288-426)||(756564-756702)
chr3 (288-426)||(9698323-9698461)
[»] scaffold0027 (1 HSPs)
scaffold0027 (187-420)||(54093-54325)
[»] scaffold0044 (1 HSPs)
scaffold0044 (288-426)||(48642-48780)
[»] chr7 (3 HSPs)
chr7 (288-426)||(7943860-7943998)
chr7 (183-423)||(730353-730593)
chr7 (288-426)||(27757639-27757777)
[»] chr6 (4 HSPs)
chr6 (288-426)||(8319281-8319419)
chr6 (334-426)||(17160335-17160427)
chr6 (288-426)||(17881256-17881394)
chr6 (342-426)||(27571563-27571647)
[»] chr4 (5 HSPs)
chr4 (288-426)||(44147800-44147938)
chr4 (161-424)||(20290246-20290509)
chr4 (341-426)||(31355421-31355506)
chr4 (339-426)||(43683007-43683094)
chr4 (288-426)||(27186881-27187019)
[»] chr2 (4 HSPs)
chr2 (288-426)||(8051634-8051772)
chr2 (288-426)||(36671293-36671431)
chr2 (341-426)||(13270358-13270443)
chr2 (339-408)||(35953920-35953989)
[»] chr1 (3 HSPs)
chr1 (288-426)||(39794637-39794775)
chr1 (288-426)||(26312255-26312393)
chr1 (161-224)||(36617812-36617875)
[»] scaffold0009 (1 HSPs)
scaffold0009 (313-426)||(64579-64692)


Alignment Details
Target: chr8 (Bit Score: 396; Significance: 0; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 21 - 448
Target Start/End: Original strand, 10683099 - 10683526
Alignment:
Q  21 attgcatcccagtaacatatatcacatcttcaattatagttatttttccaatcttgccttcaattgcaatttttcccatgccttctgcaaccagggttct 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683099 attgcatcccagtaacatatatcacatcttcaattatagttatttttccaatcttgccttcaattgcaatttttcccatgccttctgcaaccagggttct 10683198  T
Q  121 aagatctacatgtttcacttttctgagagctttgcagcttttcaatcttcatggttttcatgtcctttgattcttaaatagccataactatgaaatcaaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683199 aagatctacatgtttcacttttctgagagctttgcagcttttcaatattcatggttttcatgtcctttgattcttaaatagccataactatgaaatcaaa 10683298  T
Q  221 tcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgcatgtgttcatctgattgaaaatattaatcagtttggat 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10683299 tcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgcatgtcttcatctgattgaaaatattaatcagtttggat 10683398  T
Q  321 atgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcat 420  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||     
T  10683399 atgtaatcaacaatttttttatcatcttccatctgcatcagtttaaatttccttcttagagactgaagcttgatctgcttcaccttttcatcaccttcac 10683498  T
Q  421 gatactcttctagtatatcctatgcttc 448  Q
    |||||||||||||||||||| |||||||    
T  10683499 gatactcttctagtatatcccatgcttc 10683526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 396
Target Start/End: Original strand, 44912966 - 44913074
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || |||| |||||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||||| || ||||||| ||||||||    
T  44912966 ttcatctgatttacaacattattcagtttggagatgtaatcaacaatcttttgctcatcttccatttgcatcatttcaaactttcttcttaaagactgaa 44913065  T
Q  388 gcttgatct 396  Q
    |||| ||||    
T  44913066 gctttatct 44913074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 43811260 - 43811398
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || |||||| ||||| || ||||| |||  ||| || |||||||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  43811260 ttcatctgattcacaagattaatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcatcaattcaaatttccttctcagagattgaa 43811359  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  43811360 gcttaatcaacttcactttatcatcaccttcatgatact 43811398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 201461 - 201599
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  201461 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 201560  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  201561 gcttaatcaacttcactttatcatcaccttcatgatact 201599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 316298 - 316436
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  316298 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 316397  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  316398 gcttaatcaacttcactttatcatcaccttcatgatact 316436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 30409580 - 30409718
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  30409580 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 30409679  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  30409680 gcttaatcaacttcactttatcatcaccttcatgatact 30409718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 28647240 - 28647153
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||||||||||| ||||||||||||||||||||||||||  | |||||||| |||   || || || ||||||| |||||||||||    
T  28647240 tgatcatcttccatttgcatcagttcaaatttccttcttagttattgaagcttaatcaatttcactttatcatcaccttcatgatact 28647153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 1287707 - 1287569
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||||| |||||| ||||||||| |||| || || ||||    
T  1287707 ttcatctgattcacaagattgatgagtttagagatgtattcagaaatcttctgatcatcttccatctacatcagctcaaatttctttctcagtgattgaa 1287608  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||   || ||||| ||||||| |||||||||||    
T  1287607 gcttaatcgatttcaccttatcatcaccttcatgatact 1287569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 41946145 - 41946058
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||||||||||||| |||||| ||||||||||| | ||| || |||||||| |||  ||| || || ||||||| |||||||||||    
T  41946145 tgatcatcttccatctacatcagctcaaatttcctccgtagtgattgaagcttaatcaacttcactttatcatcaccttcatgatact 41946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 207 - 412
Target Start/End: Original strand, 16598070 - 16598275
Alignment:
Q  207 actatgaaatcaaatcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgcatgtgttcatctgattgaaaatat 306  Q
    |||||||||||||| ||| | |||||||||| ||||||||||| |||||| |||  ||||||||| |||| ||| ||||  |||||| ||||   || ||    
T  16598070 actatgaaatcaaaccttagagatagagttctcatgatcttctcaacaatttgtggatctgaaatagtttcactccatgccttcatccgattttcaacat 16598169  T
Q  307 taatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttacctt 406  Q
    ||||||  || || |||||||||||||| || || ||||||||||| |||| |  |||||||||||||| || ||| |||||||| |||| ||| |||||    
T  16598170 taatcatcttagagatgtaatcaacaatcttctgctcatcttccatttgcaactattcaaatttccttcataaagagtgaagctttatctacttcacctt 16598269  T
Q  407 ttcatc 412  Q
    ||||||    
T  16598270 ttcatc 16598275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 12019669 - 12019531
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || |||||| ||||| || ||||| |||  ||| || |||||||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  12019669 ttcatctgattcacaagattaatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcatcaattcaaatttccttctcagagattgaa 12019570  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  12019569 gcttaatcaacttcactttatcatcaccttcatgatact 12019531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 37659607 - 37659469
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || |||||| ||||| || ||||| |||  ||| || |||||||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  37659607 ttcatctgattcacaagattaatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcatcaattcaaatttccttctcagagattgaa 37659508  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  37659507 gcttaatcaacttcactttatcatcaccttcatgatact 37659469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 10275366 - 10275279
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||  ||| || || ||||||| |||||||||||    
T  10275366 tgatcatcttccatctgcatcagctcaaatttccttcttagtgattgaagcttaatcaacttcactttatcatcaccttcatgatact 10275279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 7103151 - 7103289
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  7103151 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 7103250  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  7103251 gcttaatcaacttcactttatcatcaccttcatgatact 7103289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 16795049 - 16794911
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  16795049 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 16794950  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  16794949 gcttaatcaacttcactttatcatcaccttcatgatact 16794911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 207 - 424
Target Start/End: Complemental strand, 30048276 - 30048062
Alignment:
Q  207 actatgaaatcaaatcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgcatgtgttcatctgattgaaaatat 306  Q
    ||||| |||| ||||||||| ||||| ||||  |||||| ||| || ||| |||||||| || ||||||| ||||||||  ||||| ||    | || ||    
T  30048276 actataaaataaaatcttggagatagtgttcttatgatcgtctcaataatttgttaatcagagattgtttcactgcatgccttcatttgt---acaacat 30048180  T
Q  307 taatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttacctt 406  Q
    ||||||  ||  | |||||||||| ||| ||||| || |||||||| |||||||  | |||||||||||||| |||| ||||||| |||| ||| |||||    
T  30048179 taatcaacttaaagatgtaatcaagaatcttttgctcctcttccatttgcatcaacttaaatttccttcttaaagaccgaagctttatctccttcacctt 30048080  T
Q  407 ttcatcacattcatgata 424  Q
     ||||| | |||||||||    
T  30048079 ctcatctccttcatgata 30048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 391
Target Start/End: Original strand, 40371024 - 40371127
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| ||||||||||||||||||||||| || |||||||    
T  40371024 ttcatctgattcacaagattgatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcatcagttcaaatttccttctcagtgactgaa 40371123  T
Q  388 gctt 391  Q
    ||||    
T  40371124 gctt 40371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 30696176 - 30696038
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| || || ||||    
T  30696176 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagtgattgaa 30696077  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||| ||||    
T  30696076 gcttaatcaacttcactttatcatcaccttcatggtact 30696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 43548595 - 43548457
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| |||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||    
T  43548595 ttcatctgattcacaagattgatgagtttagatatgtattcagaaatcttttgatcatcttccatctgcatcagctcaaatttccttcttagtgattgaa 43548496  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||   || || || ||||||| |||||||||||    
T  43548495 gcttaatcaatttcactttatcatcaccttcatgatact 43548457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 406
Target Start/End: Original strand, 22931084 - 22931202
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || |||||||||  |||| |||||||||||||| ||||  ||||||||||| |||||||  ||||||||||||||||   ||||||    
T  22931084 ttcatctgatttacaacattaatcagcatggagatgtaatcaacaatctttttctcatcttccatttgcatcaactcaaatttccttcttaataactgaa 22931183  T
Q  388 gcttgatctgctttacctt 406  Q
    |||| |||||||| |||||    
T  22931184 gctttatctgcttcacctt 22931202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 54171121 - 54171259
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| ||||||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  54171121 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttttgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 54171220  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  54171221 gcttaatcaacttcactttatcatcaccttcatgatact 54171259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 21847957 - 21847870
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||||||||||| |||||||| |||||||||||||| ||||| |||||||| |||  ||| || || ||||||| |||||||||||    
T  21847957 tgatcatcttccatttgcatcagctcaaatttccttctcagagattgaagcttaatcaacttcactttatcatcaccttcatgatact 21847870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 756702 - 756564
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || |||||||| ||||| |||  ||| || |||||| |||||||||||||||| |||||||| || || || || ||||    
T  756702 ttcatctgattcacaagattgatgagtttggagatgtattcagaaatcttgtgatcaacttccatctgcatcagctcaaatttactcctcagtgattgaa 756603  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||   || || || ||||||| |||||||||||    
T  756602 gcttaatcaatttcactttatcatcaccttcatgatact 756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 9698461 - 9698323
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||| ||| |||||||||||||| || || ||||    
T  9698461 ttcatctgattcacaagattgatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcaccagctcaaatttccttctcagtgattgaa 9698362  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||| ||| |||||||||||    
T  9698361 gcttaatcaacttcactttatcaccaccttcatgatact 9698323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 187 - 420
Target Start/End: Original strand, 54093 - 54325
Alignment:
Q  187 ttgattcttaaatagccataactatgaaatcaaatcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgcatgt 286  Q
    ||||||||| ||| || | ||||||||| | ||||||||| ||||| |||| ||| ||||| | |||||| |||| |||  |||||||   ||| ||||     
T  54093 ttgattcttgaattgctacaactatgaagttaaatcttggtgatagggttctcattatcttttcaacaatttgttgatcataaattgtcccactccatgc 54192  T
Q  287 gttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactga 386  Q
     ||| ||||||| | ||| || |||| |||| | |||||||||||||| || ||||  |||||||| |  ||||||| ||||||||| || | ||| |||    
T  54193 cttcctctgattcacaatgttgatcactttg-agatgtaatcaacaatcttatgatattcttccatttatatcagttgaaatttcctcctcaaagattga 54291  T
Q  387 agcttgatctgctttaccttttcatcacattcat 420  Q
    |||||||||||||| ||||||||||||| |||||    
T  54292 agcttgatctgcttcaccttttcatcaccttcat 54325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 48642 - 48780
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  48642 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 48741  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  48742 gcttaatcaacttcactttatcatcaccttcatgatact 48780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 7943860 - 7943998
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  7943860 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 7943959  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  7943960 gcttaatcaacttcactttatcatcaccttcatgatact 7943998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 423
Target Start/End: Complemental strand, 730593 - 730353
Alignment:
Q  183 tcctttgattcttaaatagccataactatgaaatcaaatcttggggatagagttcacatgatcttctaaacaatatgttaatctgaaattgtttaactgc 282  Q
    ||||||||||||| ||| || |  ||||| |||||||||||||  ||||| |||| ||| || |||| |||||| |||| ||| |  |||| ||  |  |    
T  730593 tcctttgattcttgaattgcaaccactataaaatcaaatcttgatgatagtgttctcatcattttctcaacaatttgttgatcagtcattgcttctccac 730494  T
Q  283 atgtgttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagaga 382  Q
    | |  ||||||||||| | |||||| || |||||||| || || ||| |||| ||||| || || ||||||||||||| |||||| |||||||| | |||    
T  730493 aagccttcatctgattcacaatattgatgagtttggagatatattcagcaatattttgctcttcctccatctgcatcaattcaaacttccttctcaaaga 730394  T
Q  383 ctgaagcttgatctgctttaccttttcatcacattcatgat 423  Q
    ||||||||| |||  ||| ||||| ||||| | ||||||||    
T  730393 ctgaagcttaatcaacttcaccttatcatcgccttcatgat 730353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 27757777 - 27757639
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  27757777 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 27757678  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    | || |||  ||| || || ||||||| |||||||||||    
T  27757677 gtttaatcaacttcactttatcatcaccttcatgatact 27757639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 8319281 - 8319419
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  8319281 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 8319380  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  8319381 gcttaatcaacttcactttatcatcaccttcatgatact 8319419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 426
Target Start/End: Complemental strand, 17160427 - 17160335
Alignment:
Q  334 ttttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||| ||||||||||||||||||||| ||||||||||| || || || |||||||| |||  ||| || || ||||||| |||||| ||||    
T  17160427 tttttttatcatcttccatctgcatcagctcaaatttcctcctcagtgattgaagcttaatcaacttcactttatcatcaccttcatggtact 17160335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 426
Target Start/End: Original strand, 17881256 - 17881394
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| ||||  || |||||||||||||| || || ||||    
T  17881256 ttcatctgattcacaagattgatgagtttagagatgtattcataaatcttatgatcatcttccatttgcaatagctcaaatttccttctcagtgattgaa 17881355  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  17881356 gcttaatcaacttcactttatcatcaccttcatgatact 17881394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 426
Target Start/End: Original strand, 27571563 - 27571647
Alignment:
Q  342 tcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    ||||||||||| |||||||||||||| |||||||| || || |||||||| |||   || || || ||||||| |||||||||||    
T  27571563 tcatcttccatttgcatcagttcaaacttccttctcagtgattgaagcttaatcaatttcactttatcatcaccttcatgatact 27571647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 44147938 - 44147800
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  44147938 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 44147839  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  44147838 gcttaatcaacttcactttatcatcaccttcatgatact 44147800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 424
Target Start/End: Complemental strand, 20290509 - 20290246
Alignment:
Q  161 ttcaatcttcatggttttcatgtcctttgattcttaaatagccataactatgaaatcaaatcttggggatagagttcacatgatcttctaaacaatatgt 260  Q
    |||||||||||  |||||||  ||||||||||| | ||| || |  ||||| |||||||||||||| ||||| |||| |||||| |||| |||||| |||    
T  20290509 ttcaatcttcaaagttttcacatcctttgattcatgaattgcaaccactataaaatcaaatcttggagatagtgttctcatgattttctcaacaatttgt 20290410  T
Q  261 taatctgaaattgtttaactgcatgtgttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatca 360  Q
    | ||||| || |  ||  |   | |  || |||||||| | || ||| || |||||||| ||||||||| |||| || |  ||||| ||||| |||||||    
T  20290409 tgatctgtaactacttctccataagcttttatctgatttacaacattgattagtttggagatgtaatcagcaatcttcttctcatcctccatttgcatca 20290310  T
Q  361 gttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgata 424  Q
     || ||| |||||||| |  ||||||||||| |||||||  ||||| ||||||| |||||||||    
T  20290309 atttaaacttccttctcaatgactgaagctttatctgctccaccttatcatcaccttcatgata 20290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 31355506 - 31355421
Alignment:
Q  341 atcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||| || |||  ||| || || ||||||| |||||||||||    
T  31355506 atcatcttccatctgcatcagctcaaatttccttctcagtgactgaagtttaatcatcttcactttatcatcaccttcatgatact 31355421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 43683007 - 43683094
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||||||||||| || |||||||||||||||||||| || || ||||| || |||  ||| || || ||||||| |||||||||||    
T  43683007 tgatcatcttccatttgtatcagttcaaatttccttctcagtgattgaagtttaatcaacttcactttatcatcaccttcatgatact 43683094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 27187019 - 27186881
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||| ||| |||||||||||||| || || ||||    
T  27187019 ttcatctgattcacaagattgatgagtttagagatgtattcagaaatcttctgatcatcttccatttgcaccagctcaaatttccttctcagtgattgaa 27186920  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||| ||| |||||||||||    
T  27186919 gcttaatcaacttcactttatcaccaccttcatgatact 27186881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 8051772 - 8051634
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  8051772 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 8051673  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  8051672 gcttaatcaacttcactttatcatcaccttcatgatact 8051634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 36671431 - 36671293
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  36671431 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 36671332  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  36671331 gcttaatcaacttcactttatcatcaccttcatgatact 36671293  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 13270358 - 13270443
Alignment:
Q  341 atcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||||||||||| |||||||| |||||||||||||| || || |||||||| |||  ||| || || ||||||| |||||||||||    
T  13270358 atcatcttccatttgcatcagctcaaatttccttctcagtgattgaagcttaatcaacttcactttatcatcaccttcatgatact 13270443  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 35953920 - 35953989
Alignment:
Q  339 tgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttacctttt 408  Q
    |||||||||||||| |||||||| |||||||||||||| || || |||||||| |||  |||||| ||||    
T  35953920 tgatcatcttccatttgcatcagctcaaatttccttctcagtgattgaagcttaatcaactttacttttt 35953989  T

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Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 39794775 - 39794637
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| ||||    
T  39794775 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgaa 39794676  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  39794675 gcttaatcaacttcactttatcatcaccttcatgatact 39794637  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 426
Target Start/End: Complemental strand, 26312393 - 26312255
Alignment:
Q  288 ttcatctgattgaaaatattaatcagtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaa 387  Q
    ||||||||||| | || ||| || ||||| || ||||| |||  ||| || |||||||||||||| |||||||| |||||||||||||| ||||| || |    
T  26312393 ttcatctgattcacaagattgatgagtttagagatgtactcagaaatcttctgatcatcttccatttgcatcagctcaaatttccttctcagagattgga 26312294  T
Q  388 gcttgatctgctttaccttttcatcacattcatgatact 426  Q
    |||| |||  ||| || || ||||||| |||||||||||    
T  26312293 gcttaatcaacttcactttatcatcaccttcatgatact 26312255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 36617875 - 36617812
Alignment:
Q  161 ttcaatcttcatggttttcatgtcctttgattcttaaatagccataactatgaaatcaaatctt 224  Q
    |||||||||||| |||||||  ||||||||||||| |||  | | |||||||||||||||||||    
T  36617875 ttcaatcttcatagttttcacatcctttgattcttgaatgacaacaactatgaaatcaaatctt 36617812  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 426
Target Start/End: Original strand, 64579 - 64692
Alignment:
Q  313 gtttggatatgtaatcaacaattttttgatcatcttccatctgcatcagttcaaatttccttcttagagactgaagcttgatctgctttaccttttcatc 412  Q
    ||||||| ||||| |||  ||| || ||||||||||||||||||||||| ||||||||||| || || || |||||||| |||   || ||||| |||||    
T  64579 gtttggagatgtattcagaaatcttctgatcatcttccatctgcatcagctcaaatttcctcctcagtgattgaagcttaatcaatttcaccttatcatc 64678  T
Q  413 acattcatgatact 426  Q
    || |||||||||||    
T  64679 accttcatgatact 64692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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