View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18928_high_43 (Length: 236)
Name: NF18928_high_43
Description: NF18928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18928_high_43 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 16100671 - 16100464
Alignment:
| Q |
1 |
tatcggtcttccaaacaaccacataagggcatttagtaggggttttcagatatgctccatacgagggttttcccctttgctaaaccaaggcatatgaaac |
100 |
Q |
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| T |
16100671 |
tatcagtcttccaaacaaccacataagggcatttagtaggggttttcagatctgctccatacgagggttttcccctttgctaaaccaaggcatatgaaat |
16100572 |
T |
|
| Q |
101 |
gacaaggatccaactaggatgggcaaaattctcacacagacctagaaactcatcactaacattaactcccattacaccactcttagaaaagttgacctta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
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| T |
16100571 |
gacaaggatccaactaggatgggcaaaattctcacacagacatagaaactcatcactaacattaactcccattacactactcttagaaaagtcgacctta |
16100472 |
T |
|
| Q |
201 |
agtccaaa |
208 |
Q |
| |
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|||||||| |
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| T |
16100471 |
agtccaaa |
16100464 |
T |
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