View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18928_low_10 (Length: 445)
Name: NF18928_low_10
Description: NF18928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18928_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 64 - 349
Target Start/End: Complemental strand, 24575836 - 24575551
Alignment:
| Q |
64 |
ggtgtagacaataaggattactacctatcattgctcatttattaaaaccgcatattttttcaaaacaaatcaaatcaccaaccgcttaaacattcaaacc |
163 |
Q |
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|||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
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| T |
24575836 |
ggtgtacacaataaagattactacctaatattgctcatttattaaaaccgcatattttttcaaaacaaatcaaatcaccaaccactcaaacattcaaacc |
24575737 |
T |
|
| Q |
164 |
attctagctaaacatcttagaaaggtgtttctaattatcacaagtccatgtgagacagatccttttattacgtgataaaccatgcactttcacgttaatc |
263 |
Q |
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||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24575736 |
attctagctaaacatcttagaaaggtgtttctaatactaacaagtccatgtgagacagatccttttattacgtgataaaccatgcactttcacgttaatc |
24575637 |
T |
|
| Q |
264 |
aaactcatcgaagcctggaactttgtcaacaaattatgctggaagaacttaaatcatttatgtaccacataagtcttgtaggtcac |
349 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24575636 |
aaactcatcgaagcctggaactttgtcaacaaattatgctggaagaacttaaatcatttatgtaccacataagtcttgtaggtcac |
24575551 |
T |
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