View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18928_low_14 (Length: 401)

Name: NF18928_low_14
Description: NF18928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18928_low_14
NF18928_low_14
[»] chr5 (39 HSPs)
chr5 (13-243)||(41791534-41791765)
chr5 (252-401)||(30839791-30839940)
chr5 (252-401)||(36597589-36597738)
chr5 (252-401)||(40512961-40513110)
chr5 (252-383)||(6863584-6863715)
chr5 (23-214)||(41780126-41780321)
chr5 (252-401)||(2795533-2795682)
chr5 (252-401)||(8103599-8103748)
chr5 (254-401)||(10664986-10665133)
chr5 (252-401)||(24014707-24014856)
chr5 (272-401)||(11249996-11250125)
chr5 (252-401)||(35469562-35469713)
chr5 (75-243)||(41786739-41786915)
chr5 (252-401)||(30328346-30328495)
chr5 (252-401)||(34578021-34578170)
chr5 (252-401)||(31365969-31366120)
chr5 (259-369)||(18150454-18150566)
chr5 (252-394)||(4047429-4047571)
chr5 (255-401)||(9184217-9184363)
chr5 (252-401)||(12642012-12642161)
chr5 (252-401)||(15190882-15191032)
chr5 (252-401)||(3398229-3398379)
chr5 (252-401)||(11636741-11636890)
chr5 (252-401)||(32020003-32020153)
chr5 (260-360)||(40166332-40166433)
chr5 (332-398)||(11375972-11376039)
chr5 (336-401)||(5958226-5958292)
chr5 (252-401)||(18841724-18841874)
chr5 (252-296)||(30893469-30893513)
chr5 (252-322)||(23995435-23995505)
chr5 (278-373)||(315380-315476)
chr5 (278-322)||(3936191-3936235)
chr5 (252-288)||(30893752-30893788)
chr5 (252-348)||(41350266-41350361)
chr5 (359-401)||(11692758-11692800)
chr5 (252-373)||(16174641-16174762)
chr5 (360-401)||(33072686-33072727)
chr5 (364-400)||(28378720-28378756)
chr5 (332-399)||(28629890-28629958)
[»] chr3 (47 HSPs)
chr3 (252-401)||(2571278-2571427)
chr3 (252-401)||(10307776-10307925)
chr3 (252-401)||(12515493-12515642)
chr3 (252-399)||(46492362-46492510)
chr3 (252-401)||(2379091-2379238)
chr3 (252-401)||(11610924-11611073)
chr3 (252-401)||(51618059-51618206)
chr3 (252-401)||(13495303-13495453)
chr3 (255-326)||(26291253-26291324)
chr3 (252-401)||(3863339-3863488)
chr3 (252-401)||(23638068-23638218)
chr3 (336-401)||(37444156-37444221)
chr3 (252-401)||(20938066-20938216)
chr3 (252-401)||(54527725-54527875)
chr3 (253-401)||(50364200-50364348)
chr3 (252-366)||(23803065-23803180)
chr3 (252-401)||(38389456-38389606)
chr3 (252-385)||(40497073-40497206)
chr3 (334-401)||(51339284-51339352)
chr3 (252-390)||(9710964-9711103)
chr3 (252-401)||(42180061-42180211)
chr3 (252-401)||(50204412-50204562)
chr3 (315-401)||(47386931-47387019)
chr3 (253-401)||(54621239-54621386)
chr3 (258-401)||(1569215-1569359)
chr3 (252-383)||(16875044-16875175)
chr3 (334-401)||(32553376-32553444)
chr3 (332-399)||(46845539-46845607)
chr3 (252-327)||(35414828-35414903)
chr3 (252-401)||(37055385-37055535)
chr3 (253-400)||(54026952-54027098)
chr3 (346-394)||(35094972-35095020)
chr3 (252-371)||(51401479-51401599)
chr3 (251-373)||(38786342-38786463)
chr3 (252-317)||(31318735-31318800)
chr3 (262-366)||(38785924-38786029)
chr3 (252-401)||(8165655-8165805)
chr3 (356-401)||(26291205-26291251)
chr3 (254-308)||(27300507-27300561)
chr3 (332-401)||(30214109-30214178)
chr3 (359-401)||(39365258-39365300)
chr3 (252-298)||(48776887-48776933)
chr3 (252-401)||(51567839-51567987)
chr3 (252-313)||(2566580-2566641)
chr3 (255-344)||(26499637-26499725)
chr3 (252-288)||(36812381-36812417)
chr3 (252-296)||(38277448-38277492)
[»] chr2 (48 HSPs)
chr2 (252-401)||(5583577-5583726)
chr2 (252-401)||(7757805-7757954)
chr2 (252-393)||(38248439-38248579)
chr2 (252-401)||(19228435-19228584)
chr2 (252-393)||(34213968-34214112)
chr2 (252-401)||(15411641-15411791)
chr2 (260-373)||(11660946-11661059)
chr2 (252-380)||(24729596-24729725)
chr2 (252-396)||(40562096-40562241)
chr2 (252-401)||(27665063-27665212)
chr2 (262-401)||(26229883-26230021)
chr2 (252-401)||(12016676-12016825)
chr2 (252-401)||(16126578-16126727)
chr2 (252-401)||(16919173-16919322)
chr2 (252-322)||(29157848-29157918)
chr2 (252-399)||(13351230-13351378)
chr2 (252-397)||(14377438-14377583)
chr2 (252-401)||(22705464-22705613)
chr2 (334-401)||(39904148-39904216)
chr2 (252-401)||(20566036-20566186)
chr2 (252-324)||(17234957-17235029)
chr2 (255-401)||(9450266-9450413)
chr2 (252-401)||(9747326-9747476)
chr2 (336-393)||(22162180-22162237)
chr2 (70-201)||(1681104-1681237)
chr2 (252-398)||(16123291-16123437)
chr2 (252-307)||(17265508-17265563)
chr2 (252-401)||(23932574-23932724)
chr2 (252-401)||(43806369-43806519)
chr2 (332-399)||(43388865-43388933)
chr2 (252-401)||(25998021-25998171)
chr2 (252-389)||(25948058-25948198)
chr2 (306-370)||(40503054-40503119)
chr2 (334-401)||(10690792-10690860)
chr2 (271-373)||(2051651-2051754)
chr2 (252-401)||(7720124-7720274)
chr2 (252-389)||(5853482-5853622)
chr2 (252-389)||(16493551-16493691)
chr2 (252-317)||(37471759-37471824)
chr2 (305-401)||(34817553-34817649)
chr2 (346-401)||(4579902-4579957)
chr2 (252-401)||(12919369-12919520)
chr2 (259-401)||(36612757-36612900)
chr2 (259-401)||(36620608-36620751)
chr2 (252-357)||(2544228-2544333)
chr2 (332-401)||(12438747-12438816)
chr2 (252-389)||(22704556-22704696)
chr2 (256-296)||(39607431-39607471)
[»] chr8 (51 HSPs)
chr8 (252-401)||(2161397-2161546)
chr8 (252-401)||(3306074-3306223)
chr8 (252-401)||(26364009-26364158)
chr8 (252-401)||(26682077-26682227)
chr8 (254-401)||(12131992-12132140)
chr8 (252-401)||(13327960-13328109)
chr8 (252-401)||(7140478-7140627)
chr8 (252-401)||(10129113-10129262)
chr8 (252-401)||(14816145-14816294)
chr8 (252-401)||(14829446-14829595)
chr8 (252-401)||(20514641-20514792)
chr8 (252-401)||(9801678-9801827)
chr8 (252-401)||(35678294-35678443)
chr8 (252-401)||(36967089-36967239)
chr8 (252-401)||(39701822-39701971)
chr8 (259-401)||(9743871-9744013)
chr8 (252-401)||(19343855-19344005)
chr8 (252-401)||(4080413-4080562)
chr8 (252-401)||(40210840-40210989)
chr8 (252-317)||(15198919-15198984)
chr8 (252-327)||(297179-297254)
chr8 (252-401)||(4084562-4084711)
chr8 (252-401)||(4102869-4103018)
chr8 (252-401)||(31812122-31812272)
chr8 (252-401)||(38843713-38843863)
chr8 (252-401)||(45005979-45006128)
chr8 (252-369)||(44091360-44091477)
chr8 (354-398)||(39703466-39703510)
chr8 (346-401)||(33514614-33514669)
chr8 (346-401)||(38527830-38527885)
chr8 (252-401)||(6818026-6818176)
chr8 (252-401)||(26834570-26834720)
chr8 (252-341)||(7393264-7393352)
chr8 (252-401)||(28014877-28015025)
chr8 (252-386)||(5573312-5573445)
chr8 (252-388)||(39024876-39025012)
chr8 (346-401)||(7750677-7750732)
chr8 (350-401)||(8284687-8284738)
chr8 (252-401)||(12189607-12189757)
chr8 (252-401)||(12434035-12434185)
chr8 (332-383)||(45516316-45516367)
chr8 (257-355)||(35583423-35583520)
chr8 (252-373)||(39430522-39430645)
chr8 (252-399)||(9580128-9580276)
chr8 (279-401)||(11117051-11117166)
chr8 (252-401)||(27874700-27874848)
chr8 (252-389)||(40226006-40226146)
chr8 (252-300)||(14961682-14961730)
chr8 (252-297)||(18567435-18567480)
chr8 (364-401)||(40716284-40716321)
chr8 (252-300)||(6141759-6141807)
[»] chr7 (39 HSPs)
chr7 (252-401)||(33342998-33343147)
chr7 (252-401)||(46290020-46290169)
chr7 (252-401)||(34270275-34270420)
chr7 (252-340)||(33072052-33072140)
chr7 (252-401)||(9331971-9332120)
chr7 (252-401)||(19889350-19889499)
chr7 (252-390)||(8091331-8091470)
chr7 (252-401)||(39757129-39757278)
chr7 (252-401)||(7170012-7170161)
chr7 (252-401)||(23982774-23982924)
chr7 (252-401)||(25709418-25709568)
chr7 (252-327)||(26300655-26300730)
chr7 (252-401)||(5909301-5909450)
chr7 (268-401)||(19868123-19868257)
chr7 (252-401)||(36548479-36548628)
chr7 (252-401)||(3561897-3562046)
chr7 (252-401)||(47457480-47457630)
chr7 (252-401)||(24462974-24463123)
chr7 (254-400)||(12650831-12650977)
chr7 (271-401)||(47120232-47120362)
chr7 (252-401)||(12085950-12086099)
chr7 (252-401)||(45501468-45501618)
chr7 (254-344)||(41572286-41572372)
chr7 (252-401)||(4969782-4969932)
chr7 (332-401)||(24250323-24250393)
chr7 (260-372)||(47707911-47708024)
chr7 (252-374)||(384449-384571)
chr7 (252-401)||(32117824-32117973)
chr7 (332-401)||(42750298-42750367)
chr7 (252-399)||(12624649-12624795)
chr7 (252-401)||(7040271-7040420)
chr7 (252-317)||(29398153-29398218)
chr7 (252-317)||(41331475-41331540)
chr7 (353-401)||(4161891-4161939)
chr7 (252-324)||(7899505-7899577)
chr7 (346-401)||(39869132-39869187)
chr7 (252-300)||(26037204-26037252)
chr7 (252-288)||(26050480-26050516)
chr7 (252-288)||(26059839-26059875)
[»] chr6 (35 HSPs)
chr6 (252-401)||(14228145-14228294)
chr6 (252-401)||(28943788-28943937)
chr6 (252-401)||(17552606-17552755)
chr6 (252-401)||(33017734-33017883)
chr6 (252-389)||(30591182-30591320)
chr6 (252-389)||(31069601-31069738)
chr6 (252-401)||(10887038-10887188)
chr6 (263-391)||(22974603-22974731)
chr6 (263-391)||(23813670-23813798)
chr6 (253-401)||(28757506-28757655)
chr6 (252-401)||(8977485-8977635)
chr6 (346-401)||(5363006-5363061)
chr6 (252-327)||(28756564-28756639)
chr6 (252-401)||(2830700-2830849)
chr6 (252-401)||(34692363-34692513)
chr6 (252-327)||(28759033-28759108)
chr6 (252-401)||(6016865-6017015)
chr6 (252-401)||(12454075-12454224)
chr6 (252-401)||(31503752-31503901)
chr6 (346-401)||(18332802-18332857)
chr6 (252-401)||(1017797-1017947)
chr6 (331-401)||(1814880-1814950)
chr6 (345-395)||(2086948-2086998)
chr6 (252-401)||(29863321-29863471)
chr6 (353-401)||(17596322-17596370)
chr6 (346-401)||(31791029-31791085)
chr6 (354-401)||(26602552-26602599)
chr6 (252-398)||(31169782-31169929)
chr6 (253-293)||(1814532-1814572)
chr6 (252-288)||(3853066-3853102)
chr6 (252-340)||(23936395-23936483)
chr6 (247-329)||(10671609-10671691)
chr6 (363-401)||(32615593-32615631)
chr6 (252-305)||(3261184-3261237)
chr6 (364-401)||(10345671-10345708)
[»] chr4 (54 HSPs)
chr4 (252-401)||(9759161-9759310)
chr4 (252-397)||(39876844-39876989)
chr4 (252-401)||(50352312-50352461)
chr4 (252-401)||(40049568-40049717)
chr4 (252-399)||(51691353-51691500)
chr4 (252-401)||(34941287-34941437)
chr4 (252-343)||(10658436-10658527)
chr4 (252-343)||(10872581-10872672)
chr4 (331-401)||(10658542-10658612)
chr4 (331-401)||(10872687-10872757)
chr4 (252-401)||(2096880-2097030)
chr4 (252-401)||(19450919-19451069)
chr4 (252-399)||(29190835-29190982)
chr4 (252-399)||(52391309-52391457)
chr4 (261-390)||(13009783-13009913)
chr4 (252-401)||(19468203-19468353)
chr4 (252-401)||(24684845-24684996)
chr4 (252-399)||(49181083-49181231)
chr4 (252-401)||(17409833-17409983)
chr4 (252-401)||(8736830-8736979)
chr4 (334-401)||(36000040-36000108)
chr4 (346-401)||(49228366-49228421)
chr4 (252-397)||(7349702-7349847)
chr4 (252-401)||(16667403-16667553)
chr4 (252-401)||(23545485-23545635)
chr4 (252-401)||(54495656-54495806)
chr4 (334-401)||(23553579-23553648)
chr4 (252-348)||(55813927-55814023)
chr4 (252-398)||(27019272-27019419)
chr4 (252-401)||(10389287-10389436)
chr4 (333-396)||(10813594-10813658)
chr4 (252-395)||(27362406-27362550)
chr4 (252-288)||(40682555-40682591)
chr4 (252-363)||(1378066-1378177)
chr4 (260-398)||(27756574-27756712)
chr4 (346-401)||(49332342-49332397)
chr4 (363-401)||(48910965-48911003)
chr4 (252-317)||(18882286-18882351)
chr4 (252-401)||(19838710-19838858)
chr4 (360-401)||(36968297-36968338)
chr4 (346-399)||(40681960-40682013)
chr4 (334-398)||(49650223-49650288)
chr4 (252-379)||(41415576-41415703)
chr4 (252-383)||(53961350-53961481)
chr4 (252-398)||(47326911-47327058)
chr4 (252-398)||(47341707-47341854)
chr4 (334-378)||(48910902-48910947)
chr4 (262-327)||(51070425-51070490)
chr4 (252-288)||(23051401-23051437)
chr4 (252-288)||(23438278-23438314)
chr4 (252-292)||(32279190-32279230)
chr4 (259-287)||(36971398-36971426)
chr4 (252-288)||(41488737-41488773)
chr4 (252-300)||(49228765-49228813)
[»] chr1 (46 HSPs)
chr1 (252-401)||(1502739-1502888)
chr1 (252-401)||(23576433-23576582)
chr1 (263-399)||(3121130-3121266)
chr1 (252-394)||(36490795-36490938)
chr1 (252-401)||(23591707-23591857)
chr1 (252-401)||(44918034-44918183)
chr1 (252-399)||(47355397-47355544)
chr1 (252-401)||(313759-313908)
chr1 (252-401)||(39150346-39150495)
chr1 (252-401)||(6754481-6754630)
chr1 (252-401)||(17919463-17919612)
chr1 (252-401)||(41624839-41624988)
chr1 (252-399)||(7520016-7520164)
chr1 (252-399)||(25465170-25465317)
chr1 (333-401)||(51382381-51382450)
chr1 (334-401)||(8062214-8062282)
chr1 (252-400)||(22167345-22167494)
chr1 (252-401)||(30171888-30172038)
chr1 (252-401)||(30187429-30187579)
chr1 (252-389)||(30363014-30363152)
chr1 (267-401)||(34050317-34050452)
chr1 (252-401)||(29635767-29635917)
chr1 (258-366)||(19277832-19277934)
chr1 (346-401)||(34801977-34802032)
chr1 (252-401)||(6180195-6180345)
chr1 (252-401)||(6307512-6307661)
chr1 (252-401)||(35512734-35512884)
chr1 (252-401)||(38812749-38812899)
chr1 (252-317)||(1366141-1366206)
chr1 (332-401)||(43317499-43317568)
chr1 (334-401)||(32716263-32716331)
chr1 (252-401)||(23378521-23378673)
chr1 (253-343)||(52337834-52337924)
chr1 (252-341)||(9516651-9516740)
chr1 (265-401)||(39627603-39627740)
chr1 (350-401)||(36578341-36578392)
chr1 (362-401)||(38539096-38539135)
chr1 (362-401)||(38561314-38561353)
chr1 (258-317)||(51467547-51467606)
chr1 (332-401)||(22331632-22331702)
chr1 (252-298)||(32201737-32201783)
chr1 (252-317)||(6570004-6570069)
chr1 (332-400)||(11744927-11744996)
chr1 (346-399)||(40799372-40799425)
chr1 (252-288)||(13241880-13241916)
chr1 (252-300)||(28016291-28016339)
[»] scaffold0061 (1 HSPs)
scaffold0061 (252-401)||(52798-52947)
[»] scaffold0017 (1 HSPs)
scaffold0017 (252-401)||(145687-145836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (252-401)||(94037-94187)
[»] scaffold0011 (1 HSPs)
scaffold0011 (252-401)||(13095-13244)
[»] scaffold0111 (1 HSPs)
scaffold0111 (252-401)||(37133-37283)
[»] scaffold0727 (1 HSPs)
scaffold0727 (334-401)||(5700-5769)
[»] scaffold0618 (1 HSPs)
scaffold0618 (252-369)||(8433-8550)
[»] scaffold0305 (2 HSPs)
scaffold0305 (252-389)||(17807-17946)
scaffold0305 (252-389)||(18015-18153)
[»] scaffold0229 (1 HSPs)
scaffold0229 (252-317)||(24546-24611)
[»] scaffold0155 (1 HSPs)
scaffold0155 (252-391)||(3432-3572)
[»] scaffold0009 (1 HSPs)
scaffold0009 (305-395)||(43479-43568)
[»] scaffold0073 (1 HSPs)
scaffold0073 (252-401)||(16554-16703)
[»] scaffold0192 (1 HSPs)
scaffold0192 (252-300)||(13582-13630)
[»] scaffold0631 (1 HSPs)
scaffold0631 (360-401)||(451-492)
[»] scaffold0128 (1 HSPs)
scaffold0128 (252-313)||(44313-44374)
[»] scaffold0018 (1 HSPs)
scaffold0018 (252-375)||(182079-182201)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 9e-86; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 41791534 - 41791765
Alignment:
Q  13 cagatcctaaagagtacgaaaatgccctacaaaggagaatgagttattgtccaagaagctagaa-aaataaatgtg-aaatataccttatgataggagat 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  41791534 cagatcccaaagagtacgaaaatgccctacaaaggagaatgagttattgtccaagaagctaaaataaataaatgtgaaaatataccttatgataggagat 41791633  T
Q  111 attccaaaagatgtcatttaaaaattgtatttgcacccaaaatttatttattttttccaaatttcaggaacctttcatttatgattatgtactttaaagt 210  Q
    |||||||||||||||||||||| |||||||||| ||||||||   |  | | ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  41791634 attccaaaagatgtcatttaaatattgtatttgaacccaaaaaaaaaat-tcttttccaaagttcaggaacctttcatttatgattatgtaatttaaagt 41791732  T
Q  211 gatgataaagacaacaaagtgtattatttatat 243  Q
    |||||||||||||||||||||||||||||||||    
T  41791733 gatgataaagacaacaaagtgtattatttatat 41791765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 30839940 - 30839791
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  30839940 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 30839841  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30839840 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 30839791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 36597738 - 36597589
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  36597738 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 36597639  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  36597638 taaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgt 36597589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 40513110 - 40512961
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  40513110 atttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatatataactttttgttaaataattgttgatttcaa 40513011  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40513010 taaaaacttactacttctagttaccttaacatgtgcaatattgcacatgt 40512961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 252 - 383
Target Start/End: Complemental strand, 6863715 - 6863584
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  6863715 atttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttattaaataattgttggtttcaa 6863616  T
Q  352 taaaaacttactacttttagttaccttaacat 383  Q
    ||||||||| ||||||||||||||||||||||    
T  6863615 taaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 41780126 - 41780321
Alignment:
Q  23 agagtacgaaaatgccctacaaaggagaatgagttattgtccaagaagctagaaaaataaatgtgaaatataccttatgataggagatattccaaaagat 122  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||   ||||||||||||||    
T  41780126 agagtacaaaaatgccctgcaaaggagaatgatttattgtccaagaagctaaaataataaatgtaaaatataccttatgatag--aatattccaaaagat 41780223  T
Q  123 gtcatttaaaaattgtatttgcacccaaaa-----tttatttatt-ttttccaaatttcaggaacctttcatttatgattatgtactttaaagtgatg 214  Q
    |||||||||| |||||||  | ||| ||||      |||||| || |||||| || || |||||||||||||||||||||||||| ||||||||||||    
T  41780224 gtcatttaaatattgtatgggtaccaaaaaaggttattattttttcttttcctaacttgaggaacctttcatttatgattatgtattttaaagtgatg 41780321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 2795682 - 2795533
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||  | ||||||||||||| | ||||||| |  | ||||||||||| ||| ||    
T  2795682 atttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttt-taatcaataattgttggttttca 2795584  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  2795583 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 2795533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 8103599 - 8103748
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||   ||||| |||||| | | ||  ||| |  ||| ||||||||| ||||||    
T  8103599 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattgttggtttcaa 8103698  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8103699 taaaaagttactatttttagttgccttaacatgtgcaatattgcacatgt 8103748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 401
Target Start/End: Original strand, 10664986 - 10665133
Alignment:
Q  254 ttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaata 353  Q
    |||||||| |||||||||||||||| |||| ||||  ||||||||||  ||||   |||||||| ||||||||| |  |||||||||  |  |||||||     
T  10664986 ttgcacatcttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataactttttaataaataattaatattttcaatg 10665085  T
Q  354 aaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  10665086 aaaagttattacttttagttaccttaacatgtgcaatattacacatgt 10665133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 24014707 - 24014856
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| || ||| ||||||||||||  ||||| |||||| |||||||||||||||| |||| |||| || |||||| |  | | ||| ||    
T  24014707 atttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaatatatatctttttggtaaatattattagttttgaa 24014806  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  24014807 taaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgt 24014856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 401
Target Start/End: Original strand, 11249996 - 11250125
Alignment:
Q  272 ttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaataaaaacttactacttttag 371  Q
    |||||||||||||||||||||| ||| || | |||||||||||||  ||||| ||  |  ||||||||||||| ||   || ||||||| ||||||||||    
T  11249996 ttaaaatagtaactttgcattgaaacatgtacattttgtattaaacatataatttattactaaataattgttgtttatcattaaaacttgctacttttag 11250095  T
Q  372 ttaccttaacatgtgcaatattgcacatgt 401  Q
    || | |||||||||||||||||||||||||    
T  11250096 ttgctttaacatgtgcaatattgcacatgt 11250125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 35469713 - 35469562
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||||||||||| ||||||||||||||||  ||  ||||||||| |  |||||| |||||||| ||||||||| | |||| | |||||||  |||||    
T  35469713 atttgcacatgttaaaaaatttaaaatagtaagcttttattggaactagtttattttatattaaatatataactttttcttaattgattgttgtttttca 35469614  T
Q  351 at-aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| || |||||||||||||| |||||||||||| || | |||||||    
T  35469613 ataaaaaaattgctacttttagttactttaacatgtgcactaattcacatgt 35469562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 243
Target Start/End: Original strand, 41786739 - 41786915
Alignment:
Q  75 aaaaataaatgtgaaatataccttatgataggagatattccaaaagatgtcatttaaaaattgtatttgcacccaaaa-----tttatttatt-ttttcc 168  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||||||||| |||| |||||||    ||||||||      |||||| || ||||||    
T  41786739 aaaaataaatgtgaaatataccttatgatag--aatatttcaaaagatgtcatctaaatattgtatggatacccaaaaaagttattattttttcttttcc 41786836  T
Q  169 aaatttcaggaacctttcatttatgat----tatgtactttaaagtgatgataaagacaa-caaagtgtattatttatat 243  Q
     || |||||||||||||||||||||||    ||||||||||||||||||||| ||||||| | ||| |||||||||||||    
T  41786837 taacttcaggaacctttcatttatgattatatatgtactttaaagtgatgat-aagacaaccgaagagtattatttatat 41786915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 30328346 - 30328495
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | || |||| |  | ||||||||||| |||  |    
T  30328346 atttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttta 30328444  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| | |||||||||||||| ||||||||||||||||||||||||||    
T  30328445 atgaaaaatgactacttttagttatcttaacatgtgcaatattgcacatgt 30328495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 34578170 - 34578021
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| || |||||||||||||||||   ||  |||||| || |||| |||||||| | || |||| |  | || |||||||||||| ||    
T  34578170 atttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagcttt-taatcaacaattgttgattttca 34578072  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  34578071 atgaaaaattattacttttagttaccttaacatgtggaatattgcacatgt 34578021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 31365969 - 31366120
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||| |||||||||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | |||| || |  | ||||||||||| ||| ||    
T  31365969 atttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatt-taatcaataattgttggttttca 31366067  T
Q  351 ataaaaac--ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||   ||||||| ||||| |||||||||||||||||||||||||||||    
T  31366068 ataaaaaaagttactacatttagctaccttaacatgtgcaatattgcacatgt 31366120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 18150566 - 18150454
Alignment:
Q  259 catgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgat-ttcaataaaaa 357  Q
    ||||||||||| ||||||||||||| ||||| || ||||||| |||||||||||||||| |||||| || |  |||||||||| || | |||||||||||    
T  18150566 catgttaagaagtttaaaatagtaattttgcgttagaacttgtatattttgtattaaatatataacattttaataaataattggtgttattcaataaaaa 18150467  T
Q  358 c-ttactactttt 369  Q
    | |||||||||||    
T  18150466 ctttactactttt 18150454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 4047571 - 4047429
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | || |||| |  | || |||||||| ||| ||    
T  4047571 atttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttt-taatcaacaattgttggttttca 4047473  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattg 394  Q
    || |||| ||||||||||||||||||||||||| ||||||||||    
T  4047472 atgaaaagttactacttttagttaccttaacatatgcaatattg 4047429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 401
Target Start/End: Complemental strand, 9184363 - 9184217
Alignment:
Q  255 tgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caata 353  Q
    ||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | ||  ||| |  | ||||||| ||| ||| ||||     
T  9184363 tgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagtttt-taatcaataattattggttttcaatg 9184265  T
Q  354 aaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9184264 aaaagttactacttttagttaccttaacatgtgcaatattacacatgt 9184217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12642012 - 12642161
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaa--ataattgttgattt- 348  Q
    |||||||||||||||||| |||||| || ||||||||  ||||||||||  | |||| |||||||| | |||| ||   | ||  |||||||||| |||     
T  12642012 atttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaacatt---taaacgataattgttggtttt 12642108  T
Q  349 caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| |||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  12642109 caatgaaaaattactacttttagttgccttaacatgtacaatattgcacatgt 12642161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 15191032 - 15190882
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttg-tattaaatgtataactttctgttaaataattgtt-gatttc 349  Q
    |||||||||||||||||| |||||| |||||| ||||  ||| ||||||  | ||||  |||||||| | ||||||| |  | |||||||||| | ||||    
T  15191032 atttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaacttt-taatcaataattgtttgttttc 15190934  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||| |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  15190933 aatgaaaaattactacttttacttaccttaacatatgcaatattgcacatgt 15190882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 3398379 - 3398229
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||| | | ||| ||    
T  3398379 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataattatagttttcca 3398280  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  3398279 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 3398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 11636890 - 11636741
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||| ||||||   ||||  |||||||| | ||| ||| |  ||| ||||||||| ||| ||    
T  11636890 atttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttaataattaattgttggttttca 11636792  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| | |||||||||||||||||||||||||    
T  11636791 atgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 11636741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 32020003 - 32020153
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||||||||||||||||||||||| |||| ||||  ||||||||||  |||| | ||||||||  |||||||| |    |||||| | ||  |||||    
T  32020003 atttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttttaataataatcggtgtttttca 32020102  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |  |||| ||||||  ||||||| |||||||| ||||||||||||||||||    
T  32020103 aagaaaagttactagatttagtttccttaacaagtgcaatattgcacatgt 32020153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 40166433 - 40166332
Alignment:
Q  260 atgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaaac 358  Q
    ||||||| |||| |||| ||| |||| || |||| |||||| | |||||||||||||| ||||||||| || |||||||||||||  |||||||||||||    
T  40166433 atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaatatataactttttgataaataattgttgtttttcaataaaaac 40166334  T
Q  359 tt 360  Q
    ||    
T  40166333 tt 40166332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 398
Target Start/End: Complemental strand, 11376039 - 11375972
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    ||||||||| ||||||| |||| |||| ||||||||||||||| | ||||||||||||||||||||||    
T  11376039 taaataattattgattttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 5958226 - 5958292
Alignment:
Q  336 taattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||| |||| |||| ||||||||||||||| | |||||||||| ||||||||||||||    
T  5958226 taattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgt 5958292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 18841724 - 18841874
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    ||||||| ||||||| || |||||||||| || |||| |||| || ||| | ||||  |||||||| || ||||||    ||||||||||||| |||| |    
T  18841724 atttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 18841823  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  18841824 aaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 18841874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 30893513 - 30893469
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaa 296  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  30893513 attttcacatgttaagaagtttaaaatagtaactttgcattggaa 30893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 23995435 - 23995505
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtata 322  Q
    ||||| |||||||||||| ||||||||||||| |||  |||| |||||| | |||||||||||||| ||||    
T  23995435 atttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatatata 23995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 315476 - 315380
Alignment:
Q  278 tagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttcaataaaaacttactacttttagtt 373  Q
    ||||||||||||||||||||||| | |||||| |||||||  |||||||| |  |||||| || | || ||||||| |||| |||||| ||||||||    
T  315476 tagtaactttgcattggaacttgtacattttgcattaaatacataactttttaataaatatttatggattttcaatcaaaaattactatttttagtt 315380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 3936235 - 3936191
Alignment:
Q  278 tagtaactttgcattggaacttgaatattttgtattaaatgtata 322  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||    
T  3936235 tagtaattttgcgttggaacttgcatattttgtattaaatgtata 3936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 30893788 - 30893752
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30893788 atttgcacatgttaagaagtttaaaatagtaactttg 30893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 41350361 - 41350266
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt 348  Q
    |||||||||||||||||| |||||| |||||| ||||  ||||||||||    |||| |||||||| | ||||||| |  |||||||||||||||||    
T  41350361 atttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaacttt-taataaataattgttgattt 41350266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 11692758 - 11692800
Alignment:
Q  359 ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||  |||||||||||||||||| ||||||    
T  11692758 ttactacttttagttattttaacatgtgcaatattgtacatgt 11692800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 16174641 - 16174762
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||  ||||||||||||| ||||||||||| |||| ||||||   | ||| |||||||| | ||| ||| |  ||| |||||||| | |||||    
T  16174641 atttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtgca-tttatattaaatatgtaagtttttaataattaattgttggttttca 16174739  T
Q  351 ataaaaacttactacttttagtt 373  Q
    || |||| |||||||||||||||    
T  16174740 atgaaaagttactacttttagtt 16174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 33072727 - 33072686
Alignment:
Q  360 tactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  33072727 tactacttttagttgatttaacatgtgcaatattgcacatgt 33072686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 28378756 - 28378720
Alignment:
Q  364 acttttagttaccttaacatgtgcaatattgcacatg 400  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  28378756 acttttaattactttaacatgtgcaatattgcacatg 28378720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 28629958 - 28629890
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||||||||||| ||| |||| |||| ||| || |||||||| | |||||||||||||||||| ||||    
T  28629958 taaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaatattgtacat 28629890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 2571427 - 2571278
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  2571427 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 2571328  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2571327 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 2571278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 10307925 - 10307776
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  10307925 atttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 10307826  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| || |||||||||||||||||| |||||||||||||||||||||    
T  10307825 taaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgt 10307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12515493 - 12515642
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||    
T  12515493 atttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgttggttttaa 12515592  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12515593 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 12515642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 46492362 - 46492510
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||| |||| ||||||||||||||| |||||||||||||||| |||||| | |||||||||||||| |||||||   |  |||||||||||||  |||||    
T  46492362 attttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaataaataattgttgtttttca 46492461  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  46492462 ataaaaacttaccacttttagttgctttaacatgtgcaatattgcacat 46492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 2379091 - 2379238
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||| ||||||||| |||||||||| || ||||||||||||  |||||| |||||||||||| ||| ||| ||||| |  ||||||||||||   |||||    
T  2379091 atttacacatgttaggaaatttaaactaataactttgcattaaaacttgtatattttgtatttaatatatgactttttaataaataattgtta--ttcaa 2379188  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  2379189 taaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 11611073 - 11610924
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | ||||||| |  ||||||||||||| ||| ||    
T  11611073 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttt-taataaataattgttggttttca 11610975  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  11610974 atgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgt 11610924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 51618206 - 51618059
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||| | |||||||||||||| ||||   || |  |||||||||||||  |||||    
T  51618206 atttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata---ttttaataaataattgttgtttttca 51618110  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     ||||||||| || |||||||||   |||||||||||||||||||||||||    
T  51618109 gtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgt 51618059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 13495453 - 13495303
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||| ||||  ||||||||||   ||||| |||||||| | ||  ||| |  ||||||||||||||||| ||    
T  13495453 atttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaataattgttgattttca 13495354  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  13495353 ataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgt 13495303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 26291324 - 26291253
Alignment:
Q  255 tgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactt 326  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26291324 tgcacatgttaggaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactt 26291253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 3863488 - 3863339
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | || |||| |  | |||||||| |||||| ||    
T  3863488 atttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgtagcttt-taatcaataattgctgattttca 3863390  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  3863389 atgaaaagttactacctttagttaccttaacatgtgcaatattgcacatgt 3863339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 23638068 - 23638218
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||||||||||||||||||||||| |||| || |  ||| ||||||  |||||| |||||||| || |||||| | ||||||||||| ||  |||||    
T  23638068 atttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataattgatgtttttca 23638167  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||| ||| |||||||||| ||||| |||||||||  |||||||||||||||    
T  23638168 atagaaagttactactttaagttaacttaacatgcacaatattgcacatgt 23638218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 37444221 - 37444156
Alignment:
Q  336 taattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  37444221 taattgttgatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgt 37444156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 20938216 - 20938066
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttg-tattaaatgtataactttctgttaaataattgtt-gatttc 349  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||  | ||||  |||||||| | ||| ||| |  | |||||||||| | ||||    
T  20938216 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaatttt-taatcaataattgttagttttc 20938118  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  20938117 aataaaaagttattacttttagttaccttaacatgtgcaatattgcacatgt 20938066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 54527725 - 54527875
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||||||||||||||||  || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  54527725 atttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 54527824  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  54527825 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 54527875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 401
Target Start/End: Complemental strand, 50364348 - 50364200
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caa 351  Q
    |||||||||| |||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | ||||||| |  | ||||||||||| ||| |||    
T  50364348 tttgcacatgctaagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttt-taatcaataattgttggttttcaa 50364250  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | | || |||||||||||||||||||| |||||||||||| |||||||||    
T  50364249 ttataagttactacttttagttacctttacatgtgcaatactgcacatgt 50364200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 366
Target Start/End: Original strand, 23803065 - 23803180
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||| ||||||  |||||||| || ||||||    |||||||||||||  |||||    
T  23803065 atttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaataattgttgtttttca 23803164  T
Q  351 ataaaaacttactact 366  Q
    | ||||| ||||||||    
T  23803165 agaaaaagttactact 23803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 38389606 - 38389456
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||| | |||| ||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  38389606 atttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 38389507  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  38389506 ataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 38389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 385
Target Start/End: Complemental strand, 40497206 - 40497073
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||| |||||| |||||| ||||||||||   || |||||||   ||||| |||||| | | ||  ||| |  ||| ||||||||||||||||    
T  40497206 atttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataattaattgttgatttcaa 40497107  T
Q  352 taaaaacttactacttttagttaccttaacatgt 385  Q
    |||||| ||||||||||||||| |||||||||||    
T  40497106 taaaaagttactacttttagttgccttaacatgt 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 51339284 - 51339352
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||| ||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  51339284 aataattgttggttttcaatgaaaaattactatttttagttaccttaacatgtgcaatattgcacatgt 51339352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 390
Target Start/End: Complemental strand, 9711103 - 9710964
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||| |||||||||| || |||||| ||  || ||||||||||||| |||||||||| | |||  |||| ||| |  | ||||||||||| ||| ||    
T  9711103 atttgcatatgttaagaagttcaaaataatacattcgcattggaacttgtatattttgtaattaatacataaatttttaattaataattgttgtttttca 9711004  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaat 390  Q
    |||||||||||||| ||||||||   ||||||||||||||    
T  9711003 ataaaaacttactagttttagttgttttaacatgtgcaat 9710964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 42180211 - 42180061
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||  || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||| | | ||| ||    
T  42180211 atttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataattatagttttcca 42180112  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  42180111 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 42180061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 50204562 - 50204412
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| |||||||| || | ||||  |||||||| || ||||||    || |||||||||  ||| ||    
T  50204562 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaacttttgaatatataattgttattttcca 50204463  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  50204462 agaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgt 50204412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 401
Target Start/End: Complemental strand, 47387019 - 47386931
Alignment:
Q  315 aatgtataactttctgttaaataattgttgattt--caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||| |  ||||||||||||  |||  ||||||||||||||||||||||||| | |||| ||| ||||||||||||||||    
T  47387019 aatgtataactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgt 47386931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 401
Target Start/End: Original strand, 54621239 - 54621386
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-aa 351  Q
    ||||||||| |||| ||||||||| |||||||||||  |||||| |||  | |||| |||||||| | |||| || |  | ||||||||||| |||  ||    
T  54621239 tttgcacattttaa-aaatttaaattagtaactttgacttggaagttgtgttttttatattaaatatgtaacatt-taatcaataattgttggtttttaa 54621336  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  54621337 tgaaaaattactacttttaattaccttaacatatgcaatattgcacatgt 54621386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 401
Target Start/End: Original strand, 1569215 - 1569359
Alignment:
Q  258 acatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaa 356  Q
    |||||||||||| ||||||||| |||||||| |||||||||||   ||||| ||||| || | |||||||||  ||||| |||||||  ||| |||||||    
T  1569215 acatgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaactttctaataaattattgttgttttttaataaaa 1569314  T
Q  357 acttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | |||||| ||   ||| | |||| ||||||||||||||| ||||    
T  1569315 aattactagttcgggttgctttaaaatgtgcaatattgcatatgt 1569359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 383
Target Start/End: Original strand, 16875044 - 16875175
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||| ||||||  | |||| |||||||| | || |||| |  | || |||||||| ||| ||    
T  16875044 atttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttt-taatcaacaattgttggttttca 16875142  T
Q  351 ataaaaacttactacttttagttaccttaacat 383  Q
    ||||||| |||||||||||||||||||||||||    
T  16875143 ataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 32553444 - 32553376
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  32553444 aataattattgattttcaatgaaaagttactacttttaattaccttaacatgtgtaatattgcacatgt 32553376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 46845539 - 46845607
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||||||||||||||| ||||||||| || |||||||||||| | |||| ||||||||||||||||||    
T  46845539 taaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacat 46845607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 35414828 - 35414903
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    |||| ||||||||||||| || ||||||||||||||  ||||||| ||| |||||||||||| ||| |||||||||    
T  35414828 atttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttt 35414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 37055385 - 37055535
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    |||||||||| ||||||| |||||||||||||  ||| || ||||||||  | |||| |||||| | || |||||| |  ||||||||||||   |||||    
T  37055385 atttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtgttttttatattaactataaaactttttaataaataattgttctttttca 37055484  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||  ||| |||||| |||||||| | ||||||| |||||||||| ||||||    
T  37055485 atgtaaagttactatttttagttcctttaacatatgcaatattgtacatgt 37055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 400
Target Start/End: Original strand, 54026952 - 54027098
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataat---tgttgatttc 349  Q
    |||||| |||||||||||||||||||||||| |||  |||| ||||||  ||||||  ||||||| ||||   |||| || |||||    ||| | ||||    
T  54026952 tttgcaaatgttaagaaatttaaaatagtaaatttatattgaaacttgtgtattttacattaaatatata---ttctttttaataacaactgtagttttc 54027048  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatg 400  Q
    |||||||| || || |||||||| | |||||||||||||||||||||||||    
T  54027049 aataaaaagttgcttcttttagt-atcttaacatgtgcaatattgcacatg 54027098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 35095020 - 35094972
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattg 394  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  35095020 tttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattg 35094972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 371
Target Start/End: Complemental strand, 51401599 - 51401479
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||  |||   ||||||||||||| ||| ||    
T  51401599 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaaaattcaaataaataattgttgttttcca 51401500  T
Q  351 ataaaaacttactacttttag 371  Q
    | ||||| |||||||| ||||    
T  51401499 aaaaaaagttactactattag 51401479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 38786342 - 38786463
Alignment:
Q  251 catttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttca 350  Q
    ||||||||||||||||||| ||||||||||||| ||||  ||| || |||   ||||| || ||||||| | | ||| |  ||||||||||||  |||||    
T  38786342 catttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgt-attttttaataaataattgttattttca 38786440  T
Q  351 ataaaaacttactacttttagtt 373  Q
    ||||||| |||||| ||||||||    
T  38786441 ataaaaaattactatttttagtt 38786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 31318800 - 31318735
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||||||||||||||||| ||||| |||| || |||||||||||||||| | ||||  ||||||||    
T  31318800 atttgcacatgttaagaagtttaagatagaaattttgcattggaacttgtacatttaatattaaat 31318735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 366
Target Start/End: Complemental strand, 38786029 - 38785924
Alignment:
Q  262 gttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaaactt 360  Q
    |||||||| |||||||||| || |||| ||||||||||| |  |||| |||||||| || |||||||   |||||||||||||  |||||| ||||| ||    
T  38786029 gttaagaagtttaaaatagaaattttgtattggaacttgtacgttttatattaaatataaaactttcaaataaataattgttgtttttcaaaaaaaaatt 38785930  T
Q  361 actact 366  Q
    ||||||    
T  38785929 actact 38785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 8165805 - 8165655
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgt-taaataattgttgattt-c 349  Q
    |||||||||||||||||| |||||||||  || |||| ||||||||||| | ||||  |||||| | |  |||||| ||| |||||||| |||| ||| |    
T  8165805 atttgcacatgttaagaagtttaaaatataaattttgtattggaacttgtacatttaatattaactcttaaacttt-tgtataaataatcgttgttttcc 8165707  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| |||||| | ||||||   |||| ||||||||| ||||||||||    
T  8165706 aaaaaaaagttactattattagttgttttaaaatgtgcaatgttgcacatgt 8165655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 26291251 - 26291205
Alignment:
Q  356 aacttactacttttagttacctt-aacatgtgcaatattgcacatgt 401  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||||    
T  26291251 aacttactacttttggttacctttaacatgtgtaatattgcacatgt 26291205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 27300561 - 27300507
Alignment:
Q  254 ttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatatttt 308  Q
    ||||| |||||||||| ||||||||||| | |||| |||| ||||||||||||||    
T  27300561 ttgcagatgttaagaagtttaaaatagttaatttgtattgaaacttgaatatttt 27300507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 30214109 - 30214178
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||| |||| |||| |||||| |||||||| |||||  ||||| ||||||||||||||    
T  30214109 taaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgt 30214178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 39365258 - 39365300
Alignment:
Q  359 ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||  | |||||||||||||||||||||||||    
T  39365258 ttactacttttagtagctttaacatgtgcaatattgcacatgt 39365300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 48776933 - 48776887
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaact 298  Q
    ||||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  48776933 atttgcacaagttaagaaatttaaaaaagtaaatttacattggaact 48776887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 51567839 - 51567987
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||   |||||||||| || |||| |||| |||||| | ||||  |||||||| || ||||||    ||||||||||||| |||| |    
T  51567839 atttgcacatgttaag---tttaaaatagaaattttgtattgaaacttgtacatttactattaaatataaaacttttgaataaataattgttgttttcca 51567935  T
Q  352 t--aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
       ||||| |||||||| ||||||   |||||||||||||| |||| |||||    
T  51567936 agaaaaaagttactactattagttgttttaacatgtgcaatgttgcgcatgt 51567987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 2566641 - 2566580
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtatt 313  Q
    |||| |||||||||  |||||||||||||||| |||| |||| |||||| | ||||||||||    
T  2566641 atttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgtacattttgtatt 2566580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 26499725 - 26499637
Alignment:
Q  255 tgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg 344  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||| ||||||  |||||| | || ||||||    |||||||||||||    
T  26499725 tgcacatgttaagaaatttaaaatag-aattttgtattggaatttgtatatttaatattaagtataaaacttttgaataaataattgttg 26499637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 36812417 - 36812381
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    |||||||||||||||||| |||||| |||||||||||    
T  36812417 atttgcacatgttaagaagtttaaagtagtaactttg 36812381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 38277492 - 38277448
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaa 296  Q
    |||||||||||||||||| |||||||||| || |||| |||||||    
T  38277492 atttgcacatgttaagaagtttaaaatagaaattttgtattggaa 38277448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 3e-67; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 5583577 - 5583726
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  5583577 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 5583676  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5583677 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 5583726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 7757805 - 7757954
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||    
T  7757805 atttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggttttaa 7757904  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  7757905 taaaaacttgttacttttagttaccttaacatgtacaattttgcacatgt 7757954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 252 - 393
Target Start/End: Original strand, 38248439 - 38248579
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| ||| ||    
T  38248439 atttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgttaaataattgttggttttaa 38248538  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatatt 393  Q
    ||||||||| ||| ||||||||||||||||||||||||||||    
T  38248539 taaaaacttgcta-ttttagttaccttaacatgtgcaatatt 38248579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 19228584 - 19228435
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||  | ||||||||||||| | ||||||| |  | ||||||||||| ||| ||    
T  19228584 atttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttt-taatcaataattgttggttttca 19228486  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  19228485 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 19228435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 252 - 393
Target Start/End: Original strand, 34213968 - 34214112
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtatt--aaatgtataactttctgttaaataattgtt-gattt 348  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||  |||| ||||||||| | | ||||||||||| | |||    
T  34213968 atttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttataaaataattgttggtttt 34214067  T
Q  349 caataaaaacttactacttttagttaccttaacatgtgcaatatt 393  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||    
T  34214068 caataaaaacttactatttttagttgctttaacatgtgcagtatt 34214112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 15411641 - 15411791
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| ||||||||||||||||||  ||| ||||||   ||||| |||||||| | || |||| |  ||||| ||||||| ||| ||    
T  15411641 atttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataaattattgttgtttttca 15411740  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  15411741 ataaaaaattactacttttagttactttaacatgtgcaatattgcacatgt 15411791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 260 - 373
Target Start/End: Original strand, 11660946 - 11661059
Alignment:
Q  260 atgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaataaaaact 359  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||   ||||||||||| |    
T  11660946 atgttaagaagttttaaatagtaactttgcattggaacttgtatattttgtattaaatgtataactttttaataaataattgttttattcaataaaaatt 11661045  T
Q  360 tactacttttagtt 373  Q
    | ||||||||||||    
T  11661046 tgctacttttagtt 11661059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 24729596 - 24729725
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttca 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |  |||||||| |  ||||||||| || | |||||    
T  24729596 atttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaataaataattatttattttca 24729695  T
Q  351 ataaaaacttactacttttagttaccttaa 380  Q
    ||||||| |||||| |||||||||| ||||    
T  24729696 ataaaaatttactatttttagttactttaa 24729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 396
Target Start/End: Original strand, 40562096 - 40562241
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttca 350  Q
    ||||||||||||||| || ||||||||| ||||||||||||| |||||  |||||||||||| ||| ||||||| | |  |||||||||||||| |||||    
T  40562096 atttgcacatgttaaaaagtttaaaatattaactttgcattgaaacttttatattttgtatttaatatataactctttaataaataattgttgattttca 40562195  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgca 396  Q
    ||||||||||||| ||||||  ||| ||||||||| ||||||||||    
T  40562196 ataaaaacttactgcttttaactactttaacatgtacaatattgca 40562241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 27665063 - 27665212
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | ||||||| |  ||||||||||||| ||| ||    
T  27665063 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttt-taataaataattgttggttttca 27665161  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  27665162 atgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgt 27665212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 401
Target Start/End: Original strand, 26229883 - 26230021
Alignment:
Q  262 gttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaataaaaactta 361  Q
    |||||||| ||||||||||||||||||  ||  || ||  || |||| |||||||| | ||||||| |  | ||||||||||| ||| |||||||| |||    
T  26229883 gttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttt-taatcaataattgttggttttaataaaaaatta 26229981  T
Q  362 ctacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26229982 ctacttttagttaccttaacatgtgcaatattgcacatgt 26230021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 12016825 - 12016676
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| ||||||| |||||| |||||| |||   ||||||||||  | |||| |||||||| | || |||| |  | ||||||||||| ||| ||    
T  12016825 atttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttca 12016727  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12016726 ataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 12016676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 16126578 - 16126727
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||| ||||||  | |||| |||||||| | || |||| |  | ||||||||||| ||| ||    
T  16126578 atttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttca 16126676  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  16126677 atgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgt 16126727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 16919173 - 16919322
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| |||| || |||||| |||||||||||  ||| ||||||  | |||| |||||||| | ||||||| |  | ||||||||||| ||| ||    
T  16919173 atttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttt-taatcaataattgttggttttca 16919271  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16919272 acaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 16919322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 29157848 - 29157918
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtata 322  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  29157848 atttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatatata 29157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 13351230 - 13351378
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  || |||||||  | |||| |||| ||| | |||||||   |||| ||||||||||||| ||    
T  13351230 atttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaa-taattgttgattttca 13351328  T
Q  351 ataaaaactta-ctacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||||  || ||||||||||||||||||||||||||||||||||||||    
T  13351329 ataaaaaaataactacttttagttaccttaacatgtgcaatattgcacat 13351378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 397
Target Start/End: Complemental strand, 14377583 - 14377438
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||| ||||| |||||| |||||| |||||||||||  ||| ||||||  | |||| |||||||| | ||||||| |   |||||||||||| ||| ||    
T  14377583 atttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttt-taacaaataattgttggttttca 14377485  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcac 397  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  14377484 ataaaaagttactacttttagttgccttaacatgtgcaatattgcac 14377438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 22705613 - 22705464
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| ||||||| |||||| |||||| |||   ||| ||||||  | |||| |||||||| | |||||||   |||| ||||||||| ||| ||    
T  22705613 atttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaactttaaattaa-taattgttggttttca 22705515  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  22705514 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 22705464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 39904148 - 39904216
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  39904148 aataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 39904216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 20566036 - 20566186
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||| ||||||||||||| |||||| || ||  |||| |||||||||||  |||||| ||||||||  ||||  || |  ||||||||||||| ||| ||    
T  20566036 atttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaataaataattgttgtttttca 20566135  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| | || ||| |||||||||| |||||||||||||||||||||||||    
T  20566136 ataaatagttgctatttttagttactttaacatgtgcaatattgcacatgt 20566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 17234957 - 17235029
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataac 324  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||| ||| ||||||    
T  17234957 atttgcacatgttaagaaatttaaaatagtaattttgtattggaatttgtatattttgtatttaatatataac 17235029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 401
Target Start/End: Complemental strand, 9450413 - 9450266
Alignment:
Q  255 tgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaata 353  Q
    |||||||||||||||||||||| |||||  |||| ||||||| |||  |||||| |||||||| ||||| ||| |  |||||||||||||  ||||||||    
T  9450413 tgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataattttttaataaataattgttgtttttcaata 9450314  T
Q  354 aaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || | ||  || |||||  ||| |||| ||||||||||||||||||||    
T  9450313 aatagtttttatttttaactactttaagatgtgcaatattgcacatgt 9450266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 9747476 - 9747326
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||| ||||||||||||| ||||||||||||| ||||  ||||||||||   ||||| |||||||| | || |||| |   ||||| |||||| ||| ||    
T  9747476 attttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagcttttttacaaatagttgttgtttttca 9747377  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| | ||||||||||||||||  |||||||||| | ||||||||||||    
T  9747376 ataaatagttactacttttagttaatttaacatgtgtactattgcacatgt 9747326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 22162180 - 22162237
Alignment:
Q  336 taattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatatt 393  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  22162180 taattgttggtttcaataaaaagttactacttttagttgccttaacatgtgcaatatt 22162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 1681237 - 1681104
Alignment:
Q  70 gctagaaaaataaatgtgaaatataccttatgataggagatattccaaaagatgtcatttaaaaattgtatttgcacccaa--aatttatttatt---tt 164  Q
    |||||||||||||||||||||||| ||| |||||||    | |||||||| |||||||||||| |||||||  ||||||||  |||| |||| ||   ||    
T  1681237 gctagaaaaataaatgtgaaatatgcct-atgatagat--ttttccaaaatatgtcatttaaatattgtatgggcacccaaataattaattttttttctt 1681141  T
Q  165 ttccaaatttcaggaacctttcatttatgattatgta 201  Q
    |||| |||||| |||||||||||||||||||||||||    
T  1681140 ttcctaatttccggaacctttcatttatgattatgta 1681104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 398
Target Start/End: Complemental strand, 16123437 - 16123291
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||| |||||| |||||| |||||| ||||  | ||||||||  | |||| |||||||| | |||| || |  | || ||||||| | |||||    
T  16123437 atttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatatgtaacatt-taatcaacaattgtttgttttca 16123339  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    || |||| ||||| ||||||||||||||||||||||||||||||||||    
T  16123338 atgaaaagttacttcttttagttaccttaacatgtgcaatattgcaca 16123291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 17265563 - 17265508
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattt 307  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  17265563 atttgcacttgttaagaaatttaaaatagtaactttgcgttcgaacttgaatattt 17265508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 23932724 - 23932574
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||| || ||||||| |||||||||||||  ||| || ||||||||   ||||| |||||| | || |||||| |  ||||||||||||  ||| ||    
T  23932724 atttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattgttctttttca 23932625  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||  ||| |||||| |||||||| | |||||||||||||||||||||||||    
T  23932624 atgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgt 23932574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 43806519 - 43806369
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| || |||||||||| || |||| |||| |||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  43806519 atttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 43806420  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||| ||   |||||||||||||| ||||||||||    
T  43806419 agaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgt 43806369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 43388865 - 43388933
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||||||||||||||| ||||||||| || |||||||||||| | |||| ||||||||||||||||||    
T  43388865 taaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacat 43388933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 25998021 - 25998171
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||  |||||| ||| |||||| | ||| ||||||||||||||||   ||||  || ||||| | || |||| |  ||||||||||||| ||| ||    
T  25998021 atttgcatgtgttaaaaaaattaaaaaattaattttgcattggaacttgttcatttaataataaatatgtatctttttaataaataattgttgtttttca 25998120  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||   |||||||||||| ||||||||||||||| |||||||||    
T  25998121 ataaaaagttttcacttttagttactttaacatgtgcaataatgcacatgt 25998171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 25948198 - 25948058
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||||||||||||||||||| ||| | || ||||||||| || ||  | |||||||| ||||| ||||| |||    |||||||||||||  |||||    
T  25948198 atttgcacatgttaagaaatttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttca 25948099  T
Q  351 ataaaaa--cttactacttttagttaccttaacatgtgcaa 389  Q
    |||||||  || |||||||||| || | |||||||||||||    
T  25948098 ataaaaacgctaactacttttaattgctttaacatgtgcaa 25948058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Original strand, 40503054 - 40503119
Alignment:
Q  306 tttgtattaaatgtataactttctgttaaataattgtt-gatttcaataaaaacttactactttta 370  Q
    |||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||  ||||||||    
T  40503054 tttgtattaaatatataactttttgttaaataattgttggttttcaataaaaacttgttactttta 40503119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 10690860 - 10690792
Alignment:
Q  334 aataattgttgatttc-aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||| |||  ||| |||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  10690860 aataattgttggtttttaatgaaaaattactaattttagttaacttaacatgtgcaatattgcacatgt 10690792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 2051754 - 2051651
Alignment:
Q  271 tttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaaacttactactttt 369  Q
    ||||||||||||||| |||||||  ||||  ||||||| |||||||| | ||| ||| |  |||||||||||||  ||||||||||||||| ||| ||||    
T  2051754 tttaaaatagtaactatgcattgatacttatatattttatattaaatatttaaatttttaataaataattgttgtttttcaataaaaacttgctaatttt 2051655  T
Q  370 agtt 373  Q
    ||||    
T  2051654 agtt 2051651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 7720274 - 7720124
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||| |||||| || ||||| |||| || |||| |||||||| || | | || ||||||||| |  ||||||    ||||||||||||| ||| ||    
T  7720274 atttgcacgtgttaaaaagtttaagatagaaattttgtattggaacgtgtacacttagtattaaatattaaacttttgaataaataattgttgtttttca 7720175  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  7720174 aaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 7720124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 5853482 - 5853622
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||| ||| | || ||||||||| || ||  | |||||||| ||||| ||||| |||    |||||||||||||  |||||    
T  5853482 atttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttca 5853581  T
Q  351 ataaaa--acttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||  ||| |||||||||| || | |||||||||||||    
T  5853582 ataaaaacactaactacttttaattgctttaacatgtgcaa 5853622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 16493551 - 16493691
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||| ||| | || ||||||||| || ||  | |||||||| ||||| ||||| |||    |||||||||||||  |||||    
T  16493551 atttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttca 16493650  T
Q  351 ataaaaac--ttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||||  | |||||||||| || | |||||||||||||    
T  16493651 ataaaaacattaactacttttaattgctttaacatgtgcaa 16493691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 37471759 - 37471824
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||||||||||||||||| ||||||||||||||||||  ||| ||||||   ||||| ||||||||    
T  37471759 atttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaat 37471824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 34817649 - 34817553
Alignment:
Q  305 ttttgtattaaatgtataactttctgttaaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| |||||||| ||||||||| |  ||||||||||||| |||||||||| | ||  || |||||||||  |||| | ||||||||||||| ||||    
T  34817649 ttttttattaaatatataactttttaataaataattgttgttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgt 34817553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 4579902 - 4579957
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| ||||||  ||||||| |||||||||||| ||||||||||||||    
T  4579902 tttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgt 4579957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12919369 - 12919520
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||| |||||||||| ||||||||||||||||||||   ||| ||||||   ||||| |||||||| | ||  ||| |  ||||| |||| |  ||| ||    
T  12919369 atttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgctacttttca 12919468  T
Q  351 ataaaaac-ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||  ||| |||||||| || | |||||||||||||||||||||||||    
T  12919469 ataaaaaaattaatacttttaattgctttaacatgtgcaatattgcacatgt 12919520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 36612757 - 36612900
Alignment:
Q  259 catgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaa 357  Q
    ||||||||||| |||||||||  || |||| |||  |||||| | ||||  |||||||| || ||||||    ||||||| ||||| ||| ||| |||||    
T  36612757 catgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaa 36612856  T
Q  358 cttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     |||||||| |||||||  |||||||| ||||| ||||||||||    
T  36612857 gttactactattagttattttaacatgagcaatgttgcacatgt 36612900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 36620608 - 36620751
Alignment:
Q  259 catgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaa 357  Q
    ||||||||||| |||||||||  || |||| |||  |||||| | ||||  |||||||| || ||||||    ||||||| ||||| ||| ||| |||||    
T  36620608 catgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaa 36620707  T
Q  358 cttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     |||||||| |||||||  |||||||| ||||| ||||||||||    
T  36620708 gttactactattagttattttaacatgagcaatgttgcacatgt 36620751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 2544228 - 2544333
Alignment:
Q  252 atttgcacatgttaagaaattt-aaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttca 350  Q
    ||||| ||||||||| ||| || |||||||||| |||| |||  ||||||  |||||| |||| ||||||||| ||| |  |||||||||||| ||||||    
T  2544228 atttgaacatgttaaaaaagttcaaaatagtaagtttgtattaaaacttgtgtattttatatttaatgtataattttttaataaataattgtt-atttca 2544326  T
Q  351 ataaaaa 357  Q
    |||||||    
T  2544327 ataaaaa 2544333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 12438747 - 12438816
Alignment:
Q  332 taaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||| ||| ||| |||| ||| || ||||||||  || ||||| |||||||||||||||||    
T  12438747 taaataattgttggttttaatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgt 12438816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 22704696 - 22704556
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| ||||||| |||| ||| | || ||||||||| || ||  | |||||||| ||||| ||||| |||    ||||||||||||| ||| ||    
T  22704696 atttgcacatcttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttca 22704597  T
Q  351 ataaaaac--ttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||||  | |||||||||| || | |||||||||||||    
T  22704596 ataaaaacactaactacttttaattgctttaacatgtgcaa 22704556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 39607431 - 39607471
Alignment:
Q  256 gcacatgttaagaaatttaaaatagtaactttgcattggaa 296  Q
    |||||||||||||||||||||||| ||| |||| |||||||    
T  39607431 gcacatgttaagaaatttaaaataataagtttgtattggaa 39607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 2161546 - 2161397
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||| ||||||    
T  2161546 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgttaaataattgttggtttcaa 2161447  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2161446 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 2161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 3306074 - 3306223
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||| |||||||||||||||| ||||||    
T  3306074 atttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgttaaataattgttggtttcaa 3306173  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3306174 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 3306223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 26364009 - 26364158
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||| ||    
T  26364009 atttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaattgtataactttttgttaaataattgttgattttaa 26364108  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26364109 taaaaactttctacttttagttaccttaacatgtgcaatattgcacatgt 26364158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 26682227 - 26682077
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||   ||||| |||||||||| || |||| |  ||||||||||||| ||||||    
T  26682227 atttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaataattgttgttttcaa 26682128  T
Q  352 ta-aaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||   |||||||||||||||||||||||||    
T  26682127 taaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgt 26682077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 254 - 401
Target Start/End: Complemental strand, 12132140 - 12131992
Alignment:
Q  254 ttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaat 352  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||| |||||||| ||||||||| |  |||||| |||| |  |||||||    
T  12132140 ttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaataaatacttgtggtttttcaat 12132041  T
Q  353 aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| || |||||||||||| | |||||||||||||| ||||||||||    
T  12132040 aaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgt 12131992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 13327960 - 13328109
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||| ||||||  | |||| |||||||| | |||| || |  | ||||||||||| ||| ||    
T  13327960 atttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatt-taatcaataattgttggttttca 13328058  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  13328059 atgaaaagttactacttttagttaccttaacatatgcaatattgcacatgt 13328109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 7140478 - 7140627
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| ||||||| |||||| |||||| |||   ||||||||||  | |||| |||||||| | ||  ||| |  | ||||||||||| ||| ||    
T  7140478 atttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagtttt-taatcaataattgttggttttca 7140576  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7140577 ataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 7140627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 10129262 - 10129113
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||| |||   ||||||||||  | |||| |||||||| | || |||| |  | ||||||||||| ||| ||    
T  10129262 atttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttca 10129164  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10129163 atgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgt 10129113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 14816145 - 14816294
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| ||||||||||||| |||||||||||  ||  ||||||  |||||  |||||||| | ||| ||| |  ||| ||||||||| ||| ||    
T  14816145 atttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaatttttaataattaattgttggttttca 14816243  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  14816244 ataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14816294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 14829595 - 14829446
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| ||||||||||||| |||||||||||  ||  ||||||  |||||  |||||||| | ||| ||| |  ||| ||||||||| ||| ||    
T  14829595 atttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaatttttaataattaattgttggttttca 14829497  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  14829496 ataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14829446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 20514792 - 20514641
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataatt-gttgatttca 350  Q
    ||||||||| ||||||||||||||||| |||| ||||  |||||||||| | ||||| |||||||| ||||||||| |  ||||||||| ||   |||||    
T  20514792 atttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataaataattggtatttttca 20514693  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaata-ttgcacatgt 401  Q
    |||| || |||||||||| |||| | ||| ||||||||||| ||||||||||    
T  20514692 ataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgt 20514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 9801827 - 9801678
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||| |||||   | | || |||||||| ||||||||| |  | ||||||||||||||| ||    
T  9801827 atttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataacttt-taatcaataattgttgattttca 9801729  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||| |||| |||| |||| |||||||||||||||    
T  9801728 atgaaaagttactacttttaattactttaatatgtacaatattgcacatgt 9801678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 35678294 - 35678443
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||| ||||||  |||||  |||||||| | ||| ||| |  ||| ||||||||| ||| ||    
T  35678294 atttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgtattta-tattaaatatgtaaatttttaataattaattgttggttttca 35678392  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| | |||||||||||||||||||||||||    
T  35678393 atgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 35678443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 36967089 - 36967239
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| ||||||| |||| |||||| | ||||  |||||||| || ||||||    || |||||||||| ||| ||    
T  36967089 atttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataattgttgttttcca 36967188  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||  |||||||||| |||| ||||||||||    
T  36967189 agaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgt 36967239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 39701822 - 39701971
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| || |||||| |||||||||||  ||| || |||  | |||| |||||||| | |||||||   |||  ||||||||| ||| ||    
T  39701822 atttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaattag-taattgttggttttca 39701920  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  39701921 acgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 39701971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 9744013 - 9743871
Alignment:
Q  259 catgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaa 357  Q
    |||| |||||| |||||| |||||||||||  |||||||||   | |||| |||||||| | ||||||| |  ||||||||||||| ||| |||||||||    
T  9744013 catgataagaagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaacttt-taataaataattgttggttttcaataaaaa 9743915  T
Q  358 cttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     |||||||||||||||  |||||||||  |||||||||||||||    
T  9743914 attactacttttagttgtcttaacatgcacaatattgcacatgt 9743871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 19343855 - 19344005
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttg-tattaaatgtataactttctgttaaataattgttgattt-c 349  Q
    ||||||||||||||| |  |||||| |||||| ||||  ||| |||||| || ||||  |||||||| | ||||||| |  | ||||||||||| ||| |    
T  19343855 atttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaacttt-tactcaataattgttggttttc 19343953  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19343954 aatgaaaagttactacttttggttaccttaacatgtgcaatattgcacatgt 19344005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 4080413 - 4080562
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||| ||||||||||||| |||||||||||  ||| ||||||   ||||  |||||||| | ||| ||| |  ||| |||||||| | |||||    
T  4080413 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttttca 4080511  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||| || ||||||||||||||||||| |||||||    
T  4080512 atgaaaagttactacttttactttccttaacatgtgcaatattacacatgt 4080562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 40210840 - 40210989
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||  |||||| |||||||||||  || ||| |||  | |||| |||||||| | |||| || |  | ||||||||||| ||| ||    
T  40210840 atttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatt-taatcaataattgttggttttca 40210938  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  40210939 atgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgt 40210989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 15198919 - 15198984
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||| |||||||    
T  15198919 atttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaat 15198984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 297254 - 297179
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    |||||||||||||||||| ||||||||| |||||||| |||| |||||| | |||||||||| ||| |||||||||    
T  297254 atttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattttgtatttaatatataacttt 297179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 4084562 - 4084711
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||| ||||||||||||| |||||||||||  ||| |||||    ||||  |||||||| | ||| ||| |  ||| |||||||| | |||||    
T  4084562 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttatgcattta-tattaaatatgtaaatttttagtaattaattgttagttttca 4084660  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||| || ||||||||||||||||||| |||||||    
T  4084661 atgaaaagttactacttttactttccttaacatgtgcaatattacacatgt 4084711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 4102869 - 4103018
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||| ||||||||||||| |||||||||||  ||| |||||    ||||  |||||||| | ||| ||| |  ||| |||||||| | |||||    
T  4102869 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttttgcattta-tattaaatatgtaaatttttagtaattaattgttagttttca 4102967  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||| || ||||||||||||||||||| |||||||    
T  4102968 atgaaaagttactacttttactttccttaacatgtgcaatattacacatgt 4103018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 31812272 - 31812122
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||| ||||||| |||||||| |||| ||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | ||  ||| ||    
T  31812272 atttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttatttttca 31812173  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  31812172 ataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 31812122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 38843863 - 38843713
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    ||||||||||| |||||| |||||||||  || |||  ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| |||| |    
T  38843863 atttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 38843764  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  38843763 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 38843713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 45006128 - 45005979
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||||||||||||||||| |||||||||| || |||| |||||||| || | || |  |||||||| || ||||||    ||||||||||||| |||| |    
T  45006128 atttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataaaacttttgaataaataattgttgttttcca 45006030  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  45006029 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 45005979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 44091477 - 44091360
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||| ||||||||||||||||| |||||||||||  || |||||||   ||||| |||||||| | ||  ||| |  ||||||||||||| ||||||    
T  44091477 atttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgttgttttcaa 44091378  T
Q  352 taaaaacttactactttt 369  Q
    |||||| ||| |||||||    
T  44091377 taaaaaattaatactttt 44091360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 39703510 - 39703466
Alignment:
Q  354 aaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  39703510 aaaagttactacttttagttaccttaacatgtgcaatattgcaca 39703466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 33514614 - 33514669
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||  || |||||||||||| |||||||||||||||||||||||||||    
T  33514614 tttcaataaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgt 33514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 38527885 - 38527830
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  38527885 tttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgt 38527830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 6818176 - 6818026
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||| |||||||||||| |||||||||||||  ||| || ||||||||   ||||| |||||| | || |||||| |  ||||||||||||   |||||    
T  6818176 atttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattgttctttttca 6818077  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||  ||| |||||| |||||||| | ||||||| | |||||||||||||||    
T  6818076 atgtaaagttactatttttagttcctttaacatatacaatattgcacatgt 6818026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 26834720 - 26834570
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||| || |||||||||||||||| |||| ||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  26834720 atttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 26834621  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| || |||| |||||||||| ||||| ||||    
T  26834620 ataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgt 26834570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 341
Target Start/End: Original strand, 7393264 - 7393352
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattg 341  Q
    ||||||||||||||| |||||||||||||||| ||||  ||| ||||||  |||||| |||||||| ||||||||| |  ||||||||||    
T  7393264 atttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataattg 7393352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 28014877 - 28015025
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  28014877 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttg-ttttaa 28014975  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     ||||| ||||| |  | |||||  ||||| |||| || |||||||||||    
T  28014976 aaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgt 28015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 386
Target Start/End: Complemental strand, 5573445 - 5573312
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||| |||||||||||| ||||||||| ||  |||||||| ||||||  | ||||||||||  || ||||||||| |  ||||| |||||||  |||||    
T  5573445 atttgtacatgttaagaagtttaaaataatacttttgcattagaacttatacattttgtatt--atatataactttttaataaatgattgttgtttttca 5573348  T
Q  351 ataaaaacttactacttttagttaccttaacatgtg 386  Q
    ||||||||||  || |||||||||  ||||||||||    
T  5573347 ataaaaacttgttatttttagttattttaacatgtg 5573312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 388
Target Start/End: Original strand, 39024876 - 39025012
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||| |||||| |||||| |||||||||||  |||||| |||   ||||| |||||| | | ||  ||| |  ||| ||||||||| ||||||    
T  39024876 atttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaataattaattgttggtttcaa 39024975  T
Q  352 taaaaacttactacttttagttaccttaacatgtgca 388  Q
    |||||| ||| ||||||||||| |||| | |||||||    
T  39024976 taaaaagttattacttttagttgcctttagatgtgca 39025012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 7750732 - 7750677
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||| || ||||||||||||   |||||||||||||||||||||||||    
T  7750732 tttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgt 7750677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 8284687 - 8284738
Alignment:
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||| ||||||||||||||| | ||||||||||||||| |||||||||    
T  8284687 aataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgt 8284738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12189607 - 12189757
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctg-ttaaataattgttg-atttc 349  Q
    ||||||||||| |||||| |||||||||| ||||||  ||||||||||| | ||||  |||||||| || || ||| ||  |||||||||||||  ||||    
T  12189607 atttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata-aattttttgaataaataattgttgtttttc 12189705  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| ||| |||| ||||||   ||||||||||||||  |||||||||    
T  12189706 aagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgt 12189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12434035 - 12434185
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctg-ttaaataattgttg-atttc 349  Q
    ||||||||||| |||||| |||||||||| ||||||  ||||||||||| | ||||  |||||||| || || ||| ||  |||||||||||||  ||||    
T  12434035 atttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata-aattttttgaataaataattgttgtttttc 12434133  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| ||| |||| ||||||   ||||||||||||||  |||||||||    
T  12434134 aagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgt 12434185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 383
Target Start/End: Complemental strand, 45516367 - 45516316
Alignment:
Q  332 taaataattgttgatttcaataaaaacttactacttttagttaccttaacat 383  Q
    ||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  45516367 taaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 35583520 - 35583423
Alignment:
Q  257 cacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaataaa 355  Q
    ||||||| ||||| ||||||||| ||| ||| ||||| ||||||  ||||||||||||||| ||||| ||| |   |||||||||||| ||||||||||    
T  35583520 cacatgtgaagaagtttaaaatattaagtttacattgaaacttgtgtattttgtattaaatatataa-tttttaacaaataattgttgttttcaataaa 35583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 39430645 - 39430522
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattg---ttgattt 348  Q
    ||||||||||||||| || ||| |||||||||||||  |||  || ||  ||||||| |||||||||||||| ||| |  ||||||||||   ||  |||    
T  39430645 atttgcacatgttaaaaagttttaaatagtaactttatattaaaatttatatattttatattaaatgtataa-tttttaataaataattgtttttttttt 39430547  T
Q  349 caataaaaacttactacttttagtt 373  Q
    |||| ||||||||||||||||||||    
T  39430546 caatcaaaacttactacttttagtt 39430522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 9580128 - 9580276
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgt-taaataattgttgatttc- 349  Q
    |||| ||||||||||||| |||||||||| || |||| |||| |||||| | ||||  |||||||| || |  ||| ||  ||||||||||||| ||||     
T  9580128 atttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatata-atttttttgaataaataattgttgttttcc 9580226  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    || ||||| |||||||| ||||||   |||||||||||||| ||||||||    
T  9580227 aagaaaaagttactactattagttgttttaacatgtgcaatgttgcacat 9580276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 401
Target Start/End: Original strand, 11117051 - 11117166
Alignment:
Q  279 agtaactttgcattggaacttgaatattttgtattaaatgtataactttct-gttaaataattgttgatttcaataaaaacttactacttttagttacct 377  Q
    |||||||||  ||| ||||||  |||||||||||||||||||||||||| |   ||||||||||||  |||||||||||       | |||||||| | |    
T  11117051 agtaactttttattagaacttatatattttgtattaaatgtataactttttacataaataattgtt-ttttcaataaaa-------aattttagttgctt 11117142  T
Q  378 taacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||||||||||    
T  11117143 taacatgtgcaatattgcacatgt 11117166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 27874700 - 27874848
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||| |||||||||  || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  27874700 atttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttg-ttttaa 27874798  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     ||||| ||||| |  | |||||  ||||| |||| || |||||||||||    
T  27874799 aaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgt 27874848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 40226006 - 40226146
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||| ||| | || ||||||||| || ||  | |||||||| ||||| ||||| |||    |||||||||||||  |||||    
T  40226006 atttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttca 40226105  T
Q  351 ataaaa--acttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||  ||| |||||||||| || | |||||||||||||    
T  40226106 ataaaaacactaactacttttaattgctttaacatgtgcaa 40226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 14961682 - 14961730
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    ||||||||||| |||||| ||||||||||||| |||| |||||||||||    
T  14961682 atttgcacatgctaagaagtttaaaatagtaattttgtattggaacttg 14961730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 18567435 - 18567480
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaac 297  Q
    |||||||||||||||||| |||||| |||||||||||  |||||||    
T  18567435 atttgcacatgttaagaagtttaaattagtaactttgacttggaac 18567480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 40716321 - 40716284
Alignment:
Q  364 acttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||  |||||||||||||||||||||||||    
T  40716321 acttttagttagattaacatgtgcaatattgcacatgt 40716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 6141807 - 6141759
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    |||||||||| ||| ||||||||||||||||| ||| |||| |||||||    
T  6141807 atttgcacatattaggaaatttaaaatagtaattttacattagaacttg 6141759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 7e-65; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 33343147 - 33342998
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  33343147 atttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 33343048  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33343047 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 33342998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 46290169 - 46290020
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  46290169 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 46290070  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  46290069 taaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgt 46290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 34270420 - 34270275
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  34270420 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 34270321  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||    |||||||||||||||||||||||||||||||||||||    
T  34270320 taaaaactt----cttttagttaccttaacatgtgcaatattgcacatgt 34270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 33072140 - 33072052
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataatt 340  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||    
T  33072140 atttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaataatt 33072052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 9332120 - 9331971
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||| ||||||  | |||| |||||||| | |||| || |  | ||||||||||||||| ||    
T  9332120 atttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatt-taatcaataattgttgattttca 9332022  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  9332021 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 9331971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 19889499 - 19889350
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | ||||||| |  ||||||||||||| ||| ||    
T  19889499 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttt-taataaataattgttggttttca 19889401  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  19889400 atgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgt 19889350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 252 - 390
Target Start/End: Original strand, 8091331 - 8091470
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttca 350  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||  | ||||||| |||||| ||||||||| |  ||||||||| |||| |||||    
T  8091331 atttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaataaataattattgattttca 8091430  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaat 390  Q
    ||||||| || |||||||||||| | || |||||||||||    
T  8091431 ataaaaatttgctacttttagttgctttgacatgtgcaat 8091470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 39757129 - 39757278
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||||||||||   ||| || |||  | |||| |||||||| | || |||| |  | ||||||||||||||| ||    
T  39757129 atttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagcttt-taatcaataattgttgattttca 39757227  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  39757228 atgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgt 39757278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 7170161 - 7170012
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||   ||||| |||||| | | ||  ||| |  ||| ||||||||| ||||||    
T  7170161 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattgttggtttcaa 7170062  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  7170061 taaaaagttactatttttagttgccttaacatgtgcaatattgcacatgt 7170012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 23982774 - 23982924
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||| ||||||||||||||| |||||||||||  ||||||||||  |||||| |||||||| | ||| ||| |  ||| |||||||| | ||| |    
T  23982774 atttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaataattaattgttggttttga 23982873  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| |||||||||||  ||||||||||||||    
T  23982874 atgaaaagttactacttttagttgccttaacatgtataatattgcacatgt 23982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 25709418 - 25709568
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatt-tca 350  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||   ||||  ||||||||   || |||| |  ||||| ||||||| || |||    
T  25709418 atttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaataaattattgttgtttatca 25709517  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||||||||||||||   ||||||||||||||||| |||||||    
T  25709518 ataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgt 25709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 26300730 - 26300655
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    ||||||||||||||| || |||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  26300730 atttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgtataacttt 26300655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 5909301 - 5909450
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  ||| ||||||  | |||| |||||||| | || |||| |  ||||||||||||| ||| ||    
T  5909301 atttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtagcttt-taataaataattgttggttttca 5909399  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  5909400 atgaaaagttactgcttttagttgccttaacatgtgcaatattgcacatgt 5909450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 401
Target Start/End: Complemental strand, 19868257 - 19868123
Alignment:
Q  268 aaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaacttactact 366  Q
    ||||||| ||| |||| ||||  ||| ||||||  |||||| |||||||| ||||||||| || |||||||||| || ||| |||| |||| ||||||||    
T  19868257 aaatttagaatggtaagtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactact 19868158  T
Q  367 tttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||  ||||||||||||||||||||||||||    
T  19868157 tttagttgtcttaacatgtgcaatattgcacatgt 19868123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 36548479 - 36548628
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||  || ||| || |||| |||||||| | |||  || |  | ||||||||||| ||| ||    
T  36548479 atttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaatatt-taatcaataattgttggttttca 36548577  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  36548578 ataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgt 36548628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 3561897 - 3562046
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||  ||||||  | |||| |||||||| | || |||| |  | ||||||| ||||||| ||    
T  3561897 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagcttt-taatcaataattattgattttca 3561995  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3561996 atgaaaagttactgcttttagttaccttaacatgtgcaatattgcacatgt 3562046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 47457480 - 47457630
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| ||||||||| |||||||||||  |||||| ||    ||||| ||||| |||| || ||||    ||||||||||||  ||||||    
T  47457480 atttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaaataaataattgttattttcaa 47457579  T
Q  352 taaaaac-ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||  |||||||||||||||   |||||||||||||||||||||||||    
T  47457580 taaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgt 47457630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 24462974 - 24463123
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||| ||||||||| ||||||||  ||  |  ||| | ||||| |||||||| | ||  ||| |  |||||| |||||| ||||||    
T  24462974 atttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaatacttgttgttttcaa 24463073  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||| || ||||||||||||||| |||||||||||| |||||| |||||||    
T  24463074 taagaaattactacttttagttgccttaacatgtgaaatatttcacatgt 24463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 400
Target Start/End: Complemental strand, 12650977 - 12650831
Alignment:
Q  254 ttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttcaat 352  Q
    ||||||||||||||||||||||||| |||| ||||  ||| ||||| | |||||| | |||||  ||||||||| |  |||||||||| | | |||||||    
T  12650977 ttgcacatgttaagaaatttaaaatggtaagtttgtcttgaaacttcagtattttatgttaaaa-tataactttttaataaataattggtagttttcaat 12650879  T
Q  353 aaaaacttactacttttagttaccttaacatgtgcaatattgcacatg 400  Q
     |||| |||||| ||||||||  |||||||||| ||||||||||||||    
T  12650878 gaaaagttactatttttagttggcttaacatgtacaatattgcacatg 12650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 401
Target Start/End: Original strand, 47120232 - 47120362
Alignment:
Q  271 tttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaacttactactttt 369  Q
    |||||| |||||||||||  ||||||||||  | |||| |||||||| | |||| || |  | ||||||||||| ||| |||| |||| |||||||||||    
T  47120232 tttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatt-taatcaataattgttggttttcaatgaaaaattactactttt 47120330  T
Q  370 agttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||||||||||||||    
T  47120331 agttaccataacatgtgcaatattgcacatgt 47120362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 12085950 - 12086099
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||  |||||| ||||||  ||||| ||||  ||| ||||||  | |||| |||||||| | ||||||| |  ||||||||||||||||| ||    
T  12085950 atttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaacttt-taataaataattgttgattttca 12086048  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |  |||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  12086049 acgaaaagttactacttttagttgccttaacatgtgcaatattacacatgt 12086099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 45501618 - 45501468
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||| ||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || |||| |    |||||||||||||  ||| |    
T  45501618 atttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactgttgaataaataattgttgtttttta 45501519  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| |||||||  |||||||||||||| ||||||||||    
T  45501518 agaaaaagttactactattagttattttaacatgtgcaatgttgcacatgt 45501468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 41572372 - 41572286
Alignment:
Q  254 ttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg 344  Q
    ||||||||||||| || |||||||||||||||||||||    ||||  |||||||||||||||| |||||||||||  |||||||||||||    
T  41572372 ttgcacatgttaaaaagtttaaaatagtaactttgcat----acttatatattttgtattaaatatataactttctaataaataattgttg 41572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 4969932 - 4969782
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||| | | ||| ||    
T  4969932 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataattatagttttcca 4969833  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | |||||  ||||||| ||||||   |||||||||||||| ||||||||||    
T  4969832 agaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgt 4969782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 24250393 - 24250323
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||| ||| |||| |||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  24250393 taaataattgttggttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgt 24250323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 47707911 - 47708024
Alignment:
Q  260 atgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaaac 358  Q
    |||||||||| ||||||||||||| |||| |||| |||||  | |||||||||||||| ||||||||| |  |||||||||||||  |||| |||||| |    
T  47707911 atgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttgtttttccataaaatc 47708010  T
Q  359 ttactacttttagt 372  Q
    ||  ||||||||||    
T  47708011 ttgttacttttagt 47708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 374
Target Start/End: Original strand, 384449 - 384571
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | || |||| |  | |||||||||||| |||||    
T  384449 atttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagcttt-taatcaataattgttgattttca 384547  T
Q  351 ataaaaacttactacttttagtta 374  Q
    || |||| ||||||||||||||||    
T  384548 atgaaaagttactacttttagtta 384571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 32117973 - 32117824
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    ||||||||||||||||||||||||| | | || |||   ||| |||||| ||||| | ||||||||  |||||||| |  ||| |||||| || |||| |    
T  32117973 atttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataactttttaataa-taattggtgttttcca 32117875  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||  ||| || |||| ||||||| |||||||||||||||||||||||||||    
T  32117874 atgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgt 32117824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 42750367 - 42750298
Alignment:
Q  332 taaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||| |||||||||||| ||| || |||||||| | ||||||| |||||||||||||||||    
T  42750367 taaataattattgttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacatgt 42750298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 12624795 - 12624649
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattg-ttgatttca 350  Q
    ||||||||||||||||||||||||||| |||| ||||  ||  ||||||  |||||| |||||||| || || ||| |  |||||||||| |   |||||    
T  12624795 atttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaatatacaagtttttaataaataattgatatttttca 12624697  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||||| | |||| ||||||||||||||| ||||  ||||||||||||    
T  12624696 ataaaaaataacta-ttttagttaccttaatatgtataatattgcacat 12624649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 7040271 - 7040420
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| || ||  ||||  ||||||||||  |||||| |||| ||| ||||| ||| |  ||||||||||||| ||| ||    
T  7040271 atttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaataaataattgttgttttcca 7040369  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| | || |  ||||||||||| ||||||| |||||| ||||| ||||    
T  7040370 ataaatagttgccgcttttagttactttaacatatgcaattttgcaaatgt 7040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 29398153 - 29398218
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  ||||||||    
T  29398153 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaat 29398218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 41331475 - 41331540
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||||||||   ||||| ||||||||    
T  41331475 atttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat 41331540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 4161939 - 4161891
Alignment:
Q  353 aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| ||||||||||||||| | ||||||||||||||||| |||||||    
T  4161939 aaaaagttactacttttagttcctttaacatgtgcaatattacacatgt 4161891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 7899505 - 7899577
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataac 324  Q
    ||||||||||||||| ||||||||||| |||| ||||  ||  |||||| ||||||| |||||||| ||||||    
T  7899505 atttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataac 7899577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 39869187 - 39869132
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| |||||| |||||||| | |||||||||||||||||||| ||||    
T  39869187 tttcaatgaaaagttactatttttagtttctttaacatgtgcaatattgcatatgt 39869132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 26037252 - 26037204
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    ||||||| |||||||||| |||||||||| || |||| |||||||||||    
T  26037252 atttgcagatgttaagaagtttaaaatagaaattttgtattggaacttg 26037204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 26050480 - 26050516
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  26050480 atttgcacatgttaagaaatttaaaatggtaaatttg 26050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 26059839 - 26059875
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  26059839 atttgcacatgttaagaaatttaaaatggtaaatttg 26059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 7e-65; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 14228145 - 14228294
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  14228145 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 14228244  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14228245 taaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgt 14228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 28943788 - 28943937
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  28943788 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 28943887  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  28943888 taaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgt 28943937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 17552606 - 17552755
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||| |||| |    
T  17552606 atttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgttaaataattgttggtttcga 17552705  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17552706 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 17552755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 33017883 - 33017734
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||    
T  33017883 atttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgttggttttaa 33017784  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33017783 taaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgt 33017734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 30591182 - 30591320
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgt-tgatttca 350  Q
    |||| ||||||||||||| ||| |||| |||| ||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||| |  |||||    
T  30591182 atttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgataaataattgtattttttca 30591281  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||||||||||| ||||||| | |||||||||||||    
T  30591282 ataaaaacttactacatttagttgcgttaacatgtgcaa 30591320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 31069601 - 31069738
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||| ||||||||||||| |||||| |||||||||||  ||||||||||  | |||| |||||||| | |||| || |  | ||||||||||| ||| ||    
T  31069601 atttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatt-taatcaataattgttggttttca 31069699  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaa 389  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31069700 ataaaaacttactacttttagttaccttaacatgtgcaa 31069738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 10887188 - 10887038
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| | |||| ||||  ||||||||||  |||||| |||||||| | || |||| |  ||||||| | ||| ||| ||    
T  10887188 atttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaataaataagttttgtttttca 10887089  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  10887088 ataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 10887038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 391
Target Start/End: Original strand, 22974603 - 22974731
Alignment:
Q  263 ttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaactta 361  Q
    ||||||| |||||||||||||||||   ||||||||||  | |||| |||||||| | ||||||| |  | ||||||||||||||| |||| |||| |||    
T  22974603 ttaagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttt-taatcaataattgttgattttcaatgaaaagtta 22974701  T
Q  362 ctacttttagttaccttaacatgtgcaata 391  Q
    ||||||||||||||||||||||||||||||    
T  22974702 ctacttttagttaccttaacatgtgcaata 22974731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 391
Target Start/End: Complemental strand, 23813798 - 23813670
Alignment:
Q  263 ttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaactta 361  Q
    ||||||| |||||||||||||||||   ||||||||||  | |||| |||||||| | ||||||| |  | ||||||||||||||| |||| |||| |||    
T  23813798 ttaagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttt-taatcaataattgttgattttcaatgaaaagtta 23813700  T
Q  362 ctacttttagttaccttaacatgtgcaata 391  Q
    ||||||||||||||||||||||||||||||    
T  23813699 ctacttttagttaccttaacatgtgcaata 23813670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 401
Target Start/End: Original strand, 28757506 - 28757655
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaat 352  Q
    ||||||||| |||| || ||| |||||||||||||||||| ||| ||| |  |||| |||||||||||||||||| |  |||||||||| |  |||||||    
T  28757506 tttgcacatattaaaaagttttaaatagtaactttgcatttgaagttgtaatttttttattaaatgtataactttttaataaataattgattttttcaat 28757605  T
Q  353 aaaaactt-actacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||| | |||||||| || | ||||||||||||||| | |||||||    
T  28757606 aaaaacttaaatacttttaattgctttaacatgtgcaatactacacatgt 28757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 8977485 - 8977635
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||| ||||||||| || |||||||||| |||| |||| ||||||   ||||| |||||||| | |||||||    ||||| ||||||| ||| ||    
T  8977485 atttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattgttgtttttca 8977584  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||  || |||||||||||| |||||||||||||||||||||||||||    
T  8977585 attaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgt 8977635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 5363006 - 5363061
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  5363006 tttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 5363061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 28756564 - 28756639
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  28756564 atttgcacattttaagaagttttaaatagtaactttgcattggaagttgcatatcttgtattaattgtataacttt 28756639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 2830700 - 2830849
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| ||||||||| |||||||   || ||| |||  | |||| |||||||| | || |||| |  | ||||||||||| ||| ||    
T  2830700 atttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttca 2830798  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||||||||||||||||||||| || ||||||    
T  2830799 atgaaaagttactacttttagttaccttaacatgtgcaatactgtacatgt 2830849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 34692513 - 34692363
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||| | | ||| ||    
T  34692513 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataattatagttttcca 34692414  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  34692413 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 34692363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 28759033 - 28759108
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    |||||||||||||||||| |||  |||| ||||||||||||  || ||| ||||||||||||||||||||||||||    
T  28759033 atttgcacatgttaagaagttttgaataataactttgcattaaaagttgtatattttgtattaaatgtataacttt 28759108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 6017015 - 6016865
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| || |||||| | |||||||||  ||||||||||   ||||  |||||||| ||||||||| |   |||||| ||||| ||| ||    
T  6017015 atttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaaaataagtgttgtttttca 6016916  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||| |  |||| |||||||||| ||||||||||    
T  6016915 atgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgt 6016865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 12454224 - 12454075
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||| |||| ||||||||||| |||| || |  ||||||||||  |||| | ||||||||  | |||||| |    | |||||| || ||||||    
T  12454224 atttgcacattttaaaaaatttaaaatggtaaattggttttggaacttgtgtattctatattaaatagacaactttttaaatagtaattgatgttttcaa 12454125  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| ||||||| |||| ||  ||||||||||||||||||||||||||    
T  12454124 taaaaaattactacatttaattttcttaacatgtgcaatattgcacatgt 12454075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 31503901 - 31503752
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaat---aattgttgattt 348  Q
    ||||||||||||||||||||||||| |||||| |||  |||||||||||  |||||| |||||||| ||||   |||| || |||   || |||   |||    
T  31503901 atttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatatata---ttctttttaataacaactgtgatttt 31503805  T
Q  349 caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| || || ||||||||  |||||||||||||||  ||||||||||    
T  31503804 caataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgt 31503752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 18332802 - 18332857
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  18332802 tttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 18332857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 1017797 - 1017947
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    |||| ||||||||||||| |||||| |||||||||||  ||| || |||   ||||| |||||||| | ||| ||| |  |||||||||||| | |||||    
T  1017797 atttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgttggttttca 1017896  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |  |||| ||||||||||||||||  | | |||||||| ||||||||||||    
T  1017897 acgaaaagttactacttttagttatttaatcatgtgcagtattgcacatgt 1017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 401
Target Start/End: Original strand, 1814880 - 1814950
Alignment:
Q  331 ttaaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||| ||| ||||||||||||  |  ||||||||||| | |||||||||||||||||||||||||    
T  1814880 ttaaataattattgttttcaataaaaatatgttacttttagttgctttaacatgtgcaatattgcacatgt 1814950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 2086948 - 2086998
Alignment:
Q  345 atttcaataaaaacttactacttttagttaccttaacatgtgcaatattgc 395  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  2086948 atttcaatgaaaaattactacttttaattaccttaacatgtgcaatattgc 2086998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 29863321 - 29863471
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||||||  |||  | |||||||    ||||| |||||| | || |||||| |  ||||||||| ||  ||| ||    
T  29863321 atttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaataaataattattctttttca 29863420  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||  ||| |||||| |||||||| | |||||||||||||||||||||||||    
T  29863421 atgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgt 29863471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 17596370 - 17596322
Alignment:
Q  353 aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgt 17596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 31791029 - 31791085
Alignment:
Q  346 tttcaataaaaacttactacttttagttacctt-aacatgtgcaatattgcacatgt 401  Q
    |||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||    
T  31791029 tttcaataaaaagttactacatttagtttcctttaacatgtgcaatattgcacatgt 31791085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 26602552 - 26602599
Alignment:
Q  354 aaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  26602552 aaaaattactacttttagtttccttaatatgtgcaatattgcacatgt 26602599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 398
Target Start/End: Original strand, 31169782 - 31169929
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||||||| ||||||||| |||||||||||  ||||||||||   ||||| |||||||| | ||  ||| |  ||| ||||| || | |||||    
T  31169782 atttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaattattggttttca 31169881  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    |  |||| |||||| |||||||  |||||||||||||||  |||||||    
T  31169882 aagaaaaattactatttttagtagccttaacatgtgcaagtttgcaca 31169929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 1814532 - 1814572
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattg 293  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  1814532 tttgcacatgttaaaaactttaaaatagtaactttgcattg 1814572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 3853102 - 3853066
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3853102 atttgcacatgttaagaaatttaaagtagtaactttg 3853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 23936395 - 23936483
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataatt 340  Q
    ||||||||||||||| || ||||| |||||||||||   |||||||||| | ||||| ||||||||  |||||||| |  |||||||||    
T  23936395 atttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 10671609 - 10671691
Alignment:
Q  247 tttgcatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttct 329  Q
    |||||| |||||||||||||||  || |||||||||| ||||  |||||||||  | |||||| ||||||| ||| |||||||    
T  10671609 tttgcaattgcacatgttaagatgttcaaaatagtaagtttgttttggaacttatacattttgcattaaatatatgactttct 10671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 32615593 - 32615631
Alignment:
Q  363 tacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  32615593 tacttttagttaccttaacatatgcaatattacacatgt 32615631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 3261237 - 3261184
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatat 305  Q
    |||| |||||||||| || |||||||||| ||||||||||| ||||||| ||||    
T  3261237 atttacacatgttaaaaagtttaaaatagaaactttgcattagaacttgtatat 3261184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 10345671 - 10345708
Alignment:
Q  364 acttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||| | |||||||||||||||||||||||||    
T  10345671 acttttagtttctttaacatgtgcaatattgcacatgt 10345708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 7e-65; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 9759161 - 9759310
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  9759161 atttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 9759260  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9759261 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 9759310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 397
Target Start/End: Complemental strand, 39876989 - 39876844
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| ||||||    
T  39876989 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgttaaataattgttggtttcaa 39876890  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcac 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39876889 taaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 50352461 - 50352312
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  50352461 atttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 50352362  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50352361 taaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgt 50352312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 40049717 - 40049568
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||||| |||| |    
T  40049717 atttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgttaaataattgttggtttcta 40049618  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40049617 taaaaacttactacttttagttactttaacatgtgcaatattgcacatgt 40049568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 51691500 - 51691353
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| |||| |||| |  ||||||||| || | |||||    
T  51691500 atttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaataaataattattagttttca 51691401  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||| |||||||| |||||||| | |||||||||||||| ||||||||    
T  51691400 ataaagacttacta-ttttagttgctttaacatgtgcaatgttgcacat 51691353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 34941437 - 34941287
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||| | |||||||||| ||| ||||||||| |  |||||| ||||||  |||||    
T  34941437 atttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaataaatagttgttgtttttca 34941338  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||  |||||||||||||||||| |||||||||||| |||||||    
T  34941337 ataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgt 34941287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 10658436 - 10658527
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt 343  Q
    ||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  10658436 atttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattgtt 10658527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 10872581 - 10872672
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt 343  Q
    ||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  10872581 atttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattgtt 10872672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 331 - 401
Target Start/End: Original strand, 10658542 - 10658612
Alignment:
Q  331 ttaaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10658542 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgt 10658612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 331 - 401
Target Start/End: Original strand, 10872687 - 10872757
Alignment:
Q  331 ttaaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10872687 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgt 10872757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 2097030 - 2096880
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| || ||||| |||| |||| |||||||||||   ||||| |||||||| ||||||||| |  |||||||||||||  |||||    
T  2097030 atttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttgtttttca 2096931  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||   ||||||||||   ||||| |||||||||||||||||||    
T  2096930 ataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgt 2096880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 19450919 - 19451069
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  19450919 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 19451018  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  19451019 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 19451069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 29190835 - 29190982
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||  | |||  |||||||| |  ||| || |  | ||||||||||| ||| ||    
T  29190835 atttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaacatt-taatcaataattgttggttttca 29190933  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    || |||| ||||||||||||||||||||||||| |||||||||||||||    
T  29190934 atgaaaaattactacttttagttaccttaacatatgcaatattgcacat 29190982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 52391457 - 52391309
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    |||||||||||||  |||||    
T  52391457 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttgtttttca 52391358  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    | ||||| |||||||| |||||||  ||||||||||||| ||| |||||    
T  52391357 aaaaaaagttactactattagttattttaacatgtgcaacattacacat 52391309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 390
Target Start/End: Original strand, 13009783 - 13009913
Alignment:
Q  261 tgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttcaataaaaact 359  Q
    ||||||||| ||| |||||| |||||  |||||||||||| |||||||||||||||| |||| |||| |  ||||||||| || | ||||||||||||||    
T  13009783 tgttaagaagttttaaatagcaacttcacattggaacttgtatattttgtattaaatatatagctttttagtaaataattattagttttcaataaaaact 13009882  T
Q  360 tactacttttagttaccttaacatgtgcaat 390  Q
    || |||||||||||   ||||||| ||||||    
T  13009883 taatacttttagttgttttaacatatgcaat 13009913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 19468353 - 19468203
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||| |||| |||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  19468353 atttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 19468254  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  19468253 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 19468203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 24684996 - 24684845
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-- 349  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||||      
T  24684996 atttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 24684897  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| |||||||| ||||||   |||||||||| ||| ||||| ||||    
T  24684896 aaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgt 24684845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 49181231 - 49181083
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||| ||||||||| || |||||||||| |||| |||| ||||||   ||||| |||||||| | |||||||    ||||| ||||||| ||| ||    
T  49181231 atttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattgttgtttttca 49181132  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    || |||  || |||||||||||| |||||||||||||||||||||||||    
T  49181131 attaaaggttgctacttttagtttccttaacatgtgcaatattgcacat 49181083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 17409983 - 17409833
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctg-ttaaataattgttg-atttc 349  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||||| | ||||  |||||||| || || ||| ||  |||||||||||||  ||||    
T  17409983 atttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata-aattttttgaataaataattgttgtttttc 17409885  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  17409884 aagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 17409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 8736830 - 8736979
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||||||||||||| | |||||||||  |||||||| |   ||||  |||||||| | ||||||| |  ||||||| | ||| ||| ||    
T  8736830 atttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatatgtaactttttaataaataagttttgtttttca 8736928  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| |  ||||||||||||||| ||||||||||    
T  8736929 ataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgt 8736979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 36000040 - 36000108
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  36000040 aataattgttggttttcaataaaaagttactacttttagttaccttaacatgtacaatattgcatatgt 36000108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 49228421 - 49228366
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  49228421 tttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgt 49228366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 397
Target Start/End: Complemental strand, 7349847 - 7349702
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||| ||||| |||||| |||||| |||||||||||  ||  ||||||  | |||| |||||||| | ||||||| |   |||||||||||| ||| ||    
T  7349847 atttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaacttt-taacaaataattgttggttttca 7349749  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcac 397  Q
    || |||| ||| ||||||||||| |||||||||||||||||||||||    
T  7349748 atgaaaagttattacttttagttgccttaacatgtgcaatattgcac 7349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 16667403 - 16667553
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| ||||||||  ||| |||   ||| ||||||  |||||| |||||||| | || |||| |  ||||||| ||||| ||| ||    
T  16667403 atttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaataaataagtgttgtttttca 16667502  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||| |  ||||||||||||||| ||||||||||    
T  16667503 atgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgt 16667553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 23545635 - 23545485
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| || |||||||||  || |||| ||||||| ||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  23545635 atttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaacttttgaataaataattgttgtttttca 23545536  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  23545535 agaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgt 23545485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 54495656 - 54495806
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||| | ||||||||   ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  54495656 atttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 54495755  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  54495756 aaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 54495806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 23553648 - 23553579
Alignment:
Q  334 aataattgttgattt-caataaaaac-ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||| ||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  23553648 aataattgttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcacatgt 23553579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 55814023 - 55813927
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt 348  Q
    ||||||||||||||| || ||||||||| ||| |||| |||| || ||| | ||| |||||||||| ||||||||| |  |||||||||||||||||    
T  55814023 atttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatatataactttttaataaataattgttgattt 55813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 398
Target Start/End: Complemental strand, 27019419 - 27019272
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    ||||||| ||||||| || |||||||||| || |||| |||| |||||| | ||||  |||||||| || ||||||    ||||||||||||| |||| |    
T  27019419 atttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcca 27019320  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    | ||||| |||||||| ||||||   |||||||||||||| |||||||    
T  27019319 agaaaaagttactactattagttgttttaacatgtgcaatgttgcaca 27019272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 10389287 - 10389436
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||||||| |||||| || |||||| ||||  || |||||||  | |||| ||| |||| | ||||||| |  | ||||||||||| ||| ||    
T  10389287 atttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaacttt-taatcaataattgttggttttca 10389385  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||| |||||||||||||  ||||||||| ||||||||||||||    
T  10389386 attaaaagttaatacttttagttactataacatgtgtaatattgcacatgt 10389436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 10813594 - 10813658
Alignment:
Q  333 aaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgca 396  Q
    |||||||||||| ||| ||||||||| ||| ||||||||||| ||||||||| ||||||||||||    
T  10813594 aaataattgttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 27362550 - 27362406
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| | |||| ||||  |||||| |||   ||||  |||||||| | || |||| || ||||||| | ||| ||| ||    
T  27362550 atttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttttgataaataagttttgtttttca 27362451  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgc 395  Q
    ||||||| ||||||||||||| || |||||||| |||||| ||||    
T  27362450 ataaaaaattactacttttagatatcttaacatatgcaatgttgc 27362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 40682591 - 40682555
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  40682591 atttgcacatgttaagaaatttaaaatagtaactttg 40682555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 1378177 - 1378066
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||| |||| |||   ||| |||||| | ||||  |||||||| |||||| || |  |||||||||| || ||||||    
T  1378177 atttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataacattttaataaataattgatgttttcaa 1378078  T
Q  352 taaaaacttact 363  Q
    ||| || |||||    
T  1378077 taacaaattact 1378066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 398
Target Start/End: Complemental strand, 27756712 - 27756574
Alignment:
Q  260 atgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-aataaaaac 358  Q
    ||||||||||||||||| ||| || ||||  ||| |||||| ||||| | ||||||||  |||||||| |  ||| |||||| || |||| |||  |||     
T  27756712 atgttaagaaatttaaagtagcaagtttgtcttgaaacttgtatattctatattaaatagataactttttaataa-taattggtgttttccaatgcaaag 27756614  T
Q  359 ttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    || |||| ||||||| ||||||||||||||||||||||||    
T  27756613 ttgctacatttagtttccttaacatgtgcaatattgcaca 27756574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 49332397 - 49332342
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  49332397 tttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgt 49332342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 48910965 - 48911003
Alignment:
Q  363 tacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  48910965 tacttttagttatcttaacatgtgcaatattgcacatgt 48911003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 18882286 - 18882351
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||| | ||||  ||||||||    
T  18882286 atttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaat 18882351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 19838710 - 19838858
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||    |||||||||| || |||| ||||||||||| | ||||  |||||||| || ||||||    ||||||||||||| ||| ||    
T  19838710 atttgcacatgttaacccgtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttg-tttaaa 19838808  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
     ||||| ||| |||| ||||||   |||||||||||||| || |||||||    
T  19838809 aaaaaagttattactattagttgttttaacatgtgcaatgttccacatgt 19838858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 36968338 - 36968297
Alignment:
Q  360 tactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  36968338 tactacttttagttactttaacatgtgtaatattgcacatgt 36968297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 40682013 - 40681960
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||||||||| |||||| ||||||||  |||||||| |||||||||||||||    
T  40682013 tttcaataaaaaattactatttttagttgacttaacatatgcaatattgcacat 40681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 49650288 - 49650223
Alignment:
Q  334 aataattgtt-gatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    |||||||||| | ||| ||| |||| ||||| |||||||||||||||| |||||||||||||||||    
T  49650288 aataattgtttgtttttaatgaaaagttacttcttttagttaccttaatatgtgcaatattgcaca 49650223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 379
Target Start/End: Original strand, 41415576 - 41415703
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| ||| || |||||| |||||||||||  ||| || |||  | |||| |||||||| | || |||| |  ||||||||||||||||| ||    
T  41415576 atttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtagcttt-taataaataattgttgattttca 41415674  T
Q  351 ataaaaacttactacttttagttacctta 379  Q
    || |||| ||||||||||||||| |||||    
T  41415675 attaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 383
Target Start/End: Complemental strand, 53961481 - 53961350
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||| ||||  ||| || |||  | |||| |||||||| | |||| || |    ||||||||||||||| ||    
T  53961481 atttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatt-taaacaataattgttgattttca 53961383  T
Q  351 ataaaaacttactacttttagttaccttaacat 383  Q
    || |||| ||||||||||||||||| |||||||    
T  53961382 atgaaaaattactacttttagttactttaacat 53961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 398
Target Start/End: Original strand, 47326911 - 47327058
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| | |||||||||  |||||||||    ||||  |||||||| | ||  ||| |  ||||||| | ||| ||| ||    
T  47326911 atttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagttttgtttttca 47327010  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    || |||| ||||||||||||| |  ||||||||||||||| |||||||    
T  47327011 atgaaaaattactacttttagatgtcttaacatgtgcaatgttgcaca 47327058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 398
Target Start/End: Original strand, 47341707 - 47341854
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| | |||||||||  |||||||||    ||||  |||||||| | ||  ||| |  ||||||| | ||| ||| ||    
T  47341707 atttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagttttgtttttca 47341806  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 398  Q
    || |||| ||||||||||||| |  ||||||||||||||| |||||||    
T  47341807 atgaaaaattactacttttagatgtcttaacatgtgcaatgttgcaca 47341854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 48910902 - 48910947
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttacctt 378  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||    
T  48910902 aataattgttaattttcaataaaaaattactacttttagttacctt 48910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 51070425 - 51070490
Alignment:
Q  262 gttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataacttt 327  Q
    ||||||||||||||||| |||| ||||  ||| ||||||  |||||| |||||||| |||||||||    
T  51070425 gttaagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataacttt 51070490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 23051401 - 23051437
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  23051401 atttgcacatgataagaaatttaaagtagtaactttg 23051437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 23438314 - 23438278
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  23438314 atttgcacatgttgagaattttaaaatagtaactttg 23438278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 32279230 - 32279190
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcatt 292  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  32279230 atttgcacatgttaaaaagtttaaaatagtaaatttgcatt 32279190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 36971426 - 36971398
Alignment:
Q  259 catgttaagaaatttaaaatagtaacttt 287  Q
    |||||||||||||||||||||||||||||    
T  36971426 catgttaagaaatttaaaatagtaacttt 36971398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 41488737 - 41488773
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  41488737 atttgcacatgttaagaaatttaaaattgtaaatttg 41488773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 49228813 - 49228765
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    |||||||| ||||||||| |||||| |||||||||||  ||||||||||    
T  49228813 atttgcacgtgttaagaagtttaaattagtaactttgacttggaacttg 49228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 1502739 - 1502888
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  1502739 atttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaataattgttgttttcaa 1502838  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  1502839 taaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgt 1502888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 23576433 - 23576582
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  23576433 atttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgttaaataattgttggtttcaa 23576532  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  23576533 taaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgt 23576582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 3121266 - 3121130
Alignment:
Q  263 ttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaataaaaacttac 362  Q
    ||||||||||||||||||||||||| |||| |||||| || |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |    
T  3121266 ttaagaaatttaaaatagtaactttacattagaacttaaacattttgtattaaatatataactttttgttaaataattgttggtttcaataaaaacttgc 3121167  T
Q  363 tacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||||| |||||||||||| || ||||||||||||    
T  3121166 tacttttaattaccttaacatatgtaatattgcacat 3121130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 252 - 394
Target Start/End: Complemental strand, 36490938 - 36490795
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||| |  |||||||||||||  |||||    
T  36490938 atttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaataaataattgttgtttttca 36490839  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattg 394  Q
    |||||||||||||||||||| || | ||||||||||||||||||    
T  36490838 ataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 23591857 - 23591707
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttga-tttca 350  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||| | |||||||||||||| ||||||||| |  ||||||||| |||| |||||    
T  23591857 atttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaataaataattattgattttca 23591758  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||| |||||||| | |||||||||||||| ||||||||||    
T  23591757 ataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgt 23591707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 44918183 - 44918034
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||| |||||||||||||||||||| ||||||||||   |||||||||   | |||| |||||||| | || |||| |  | ||||||||||||||| ||    
T  44918183 atttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagcttt-taatcaataattgttgattttca 44918085  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44918084 ataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgt 44918034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 47355397 - 47355544
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    |||| ||||||||||||||||||||||| ||| |||| |||||||||||   ||||| ||||||   |||| |||| || ||| ||||||||| ||||||    
T  47355397 atttacacatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgatatacctttttgataagtaattgttgttttcaa 47355496  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||| ||  ||||||||||| | |||||||||||||||||||||||    
T  47355497 taaaaagtttatacttttagttgctttaacatgtgcaatattgcacat 47355544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 313908 - 313759
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| |||||||| | || |||| |  | ||||||||||| ||| ||    
T  313908 atttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttt-taatcaataattgttggttttca 313810  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  313809 atcaaaaattactacttttagttaccttaacatgtgcaatattgcacatgt 313759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 39150346 - 39150495
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||| |||||| |||||| |||||||||||  |||||| |||  | |||| |||||||| | ||||||| |  ||||||||||||| ||| ||    
T  39150346 atttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttt-taataaataattgttggttttca 39150444  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  39150445 atgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgt 39150495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 6754630 - 6754481
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||||||| |||||| |||||| |||||||||||  ||||||||||   ||||| |||||| | | ||  ||| |  ||| ||||||||| ||||||    
T  6754630 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattgttggtttcaa 6754531  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  6754530 taaaaagttactatttttagttgccttaacatgtgcaatattgcacatgt 6754481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 17919612 - 17919463
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    ||||||||||  |||||| |||||| |||||||||||  |||||| |||  | |||| |||||||| | ||||||| |  ||||||||||||| ||| ||    
T  17919612 atttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttt-taataaataattgttggttttca 17919514  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  17919513 atgaaaagttactacttttagttgccttaacatgtacaatattgcacatgt 17919463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 41624988 - 41624839
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||| ||| |||||| |||||| |||||||||||  ||||||||||   ||||| |||||| | | ||  ||| |  ||| ||||||||| ||||||    
T  41624988 atttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattgttggtttcaa 41624889  T
Q  352 taaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||| |||||| |||||||| | |||||||||||||||||||||||||    
T  41624888 taaaaagttactatttttagttgctttaacatgtgcaatattgcacatgt 41624839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 399
Target Start/End: Original strand, 7520016 - 7520164
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||| ||||||||||||| |||||||||  |||||||||||| || ||| | |||||||||| ||| |||||| || |  ||||||| | ||  |||  |    
T  7520016 attttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatatataacattttaataaataagtattatttttta 7520115  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  7520116 ataaaaatttactacttttagttgctttaacatgtgcaatattgcacat 7520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 25465317 - 25465170
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatt-tca 350  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||   ||||  |   |||| | ||||||| || ||||||||||||| || |||    
T  25465317 atttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgcatttaatggaaaatatttaactttttgataaataattgttgtttctca 25465218  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    || |||| || ||||||||||| || |||||||||||||||||||||||    
T  25465217 at-aaaagttgctacttttagtgactttaacatgtgcaatattgcacat 25465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 51382450 - 51382381
Alignment:
Q  333 aaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  51382450 aaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 51382381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 8062282 - 8062214
Alignment:
Q  334 aataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  8062282 aataattgttgattttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgt 8062214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 400
Target Start/End: Complemental strand, 22167494 - 22167345
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctg-ttaaataattgttg-atttc 349  Q
    ||||||||||| |||||| |||||||||| ||||||| ||||||||||| | ||||  |||||||| || || ||| ||  |||||||||||||  ||||    
T  22167494 atttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata-aattttttgaataaataattgttgtttttc 22167396  T
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatg 400  Q
    || ||||| |||||||| ||||||   |||||||||||||| |||||||||    
T  22167395 aagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatg 22167345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 30172038 - 30171888
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||| | |||||||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  30172038 atttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 30171939  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| |  ||||||||||||||| ||||||||||    
T  30171938 ataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgt 30171888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 30187579 - 30187429
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||| | |||||||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  30187579 atttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 30187480  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| |  ||||||||||||||| ||||||||||    
T  30187479 ataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgt 30187429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 30363014 - 30363152
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||||   ||||| |||||||| | ||  ||| |  ||| |||||||| | |||||    
T  30363014 atttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaattgttggttttca 30363113  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaa 389  Q
    ||||||| |||||| |||||||  |||||||||||||||    
T  30363114 ataaaaagttactatttttagtagccttaacatgtgcaa 30363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 401
Target Start/End: Original strand, 34050317 - 34050452
Alignment:
Q  267 gaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaacttactac 365  Q
    ||||||||||||| ||| |||| |||| |||||  | ||||| |||| ||| ||||| ||| || ||||||||||||| ||| |||||| || ||  |||    
T  34050317 gaaatttaaaataataattttgtattgaaacttttacattttatatttaatatataattttttgataaataattgttgtttttcaataataatttgttac 34050416  T
Q  366 ttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||| | |||||||||||||||||||||||||    
T  34050417 ttttggttgctttaacatgtgcaatattgcacatgt 34050452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 29635767 - 29635917
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||| ||||||||| ||||||||||||||||||||  |||| |||||| |||||||||||| ||  ||||||||| |  ||||||||| |   ||| ||    
T  29635767 atttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatttaacatataactttttaataaataattatcatttttaa 29635866  T
Q  352 t-aaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||| |||||||||  | |||| || | |||||||||||||||    
T  29635867 taaaaaatttaccacttttagtctctttaatatatacaatattgcacatgt 29635917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 19277934 - 19277832
Alignment:
Q  258 acatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttcaataaaa 356  Q
    ||||||| |||| ||||||||||||| ||||||||||||| || ||||||||||||       ||||||| |  |||||||||||||  |||||||||||    
T  19277934 acatgttcagaagtttaaaatagtaattttgcattggaacgtgtatattttgtatt-------taactttttaataaataattgttgtttttcaataaaa 19277842  T
Q  357 acttactact 366  Q
    ||||||||||    
T  19277841 acttactact 19277832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 34802032 - 34801977
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  34802032 tttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 34801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 6180345 - 6180195
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||| | ||||  |||||||| || ||||||    ||||||||| |   ||| ||    
T  6180345 atttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataaaacttttaaataaataattataattttcca 6180246  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   |||||||||||||| ||||||||||    
T  6180245 agaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgt 6180195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 6307661 - 6307512
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||||||||||||||||| |||||| || ||  ||||  ||||||||||  |||||| |||||| | ||||| ||| |  ||||||||||||| |||| |    
T  6307661 atttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaa-tatataaatttttaataaataattgttgttttcca 6307563  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| | || |  ||||||||||| ||||||| |||||| ||||||||||    
T  6307562 ataaatagttgccgcttttagttactttaacatatgcaattttgcacatgt 6307512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 35512884 - 35512734
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||| | ||||  |||||||| || ||||||    || |||| ||||| ||| ||    
T  35512884 atttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataaaacttttgaatatataaatgttgttttcca 35512785  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   ||||||| |||||| ||||||||||    
T  35512784 agaaaaagttactactattagttgttttaacatttgcaatgttgcacatgt 35512734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 38812899 - 38812749
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||||||||||||||||| || ||||||| || |||  |||| |||||| | ||||  |||||||| || ||||||    ||||||||||||| |||| |    
T  38812899 atttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttgttttcta 38812800  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | ||||| |||||||| ||||||   ||||||||| |||| ||||||||||    
T  38812799 agaaaaagttactactattagttgttttaacatgtacaatgttgcacatgt 38812749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 1366206 - 1366141
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||| ||||||| ||||||||||||||||||| |||| ||||||| ||||| |||| |||||||||    
T  1366206 atttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaat 1366141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 43317568 - 43317499
Alignment:
Q  332 taaataattgttgatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| ||||||| |||||| ||| | ||||||||||||||| | ||||||||| |||||||||||||||    
T  43317568 taaatgattgttgttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgt 43317499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 32716263 - 32716331
Alignment:
Q  334 aataattgtt-gatttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||| | ||||||  |||| ||||| | |||||||||||||||||||||||||||||||||||    
T  32716263 aataattgtttgttttcaacgaaaagttacttcatttagttaccttaacatgtgcaatattgcacatgt 32716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 23378521 - 23378673
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgta---taactttctgttaaataattgttgattt 348  Q
    ||||| |||||||||||| || |||||||||| |||| ||||  | ||| | ||||| |||||||| ||   ||||||| |   |||||||||||  |||    
T  23378521 atttgaacatgttaagaatttcaaaatagtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataattgttatttt 23378620  T
Q  349 caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||| ||| || ||||||||   ||||||| || ||||||||||||||    
T  23378621 caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 23378673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 52337924 - 52337834
Alignment:
Q  253 tttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt 343  Q
    |||| |||||||||||| ||||||||||||| | ||||||| |||||   |||||| |||||||| ||||| ||| |  ||||||||||||    
T  52337924 tttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatatataaatttttaataaataattgtt 52337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 9516740 - 9516651
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattg 341  Q
    ||||||||||||||||||||||||||| |||| |||   ||  ||||||  |||||| |||||||| ||||||||| |  ||||||||||    
T  9516740 atttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaataattg 9516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 39627603 - 39627740
Alignment:
Q  265 aagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaacttact 363  Q
    ||||| || |||||||||| |||| |||| ||||||   ||||| |||||||| | |||||||    ||| | ||||||| ||| |||| |||| || ||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataagtgattgttgtttttcaattaaaagttgct 39627702  T
Q  364 acttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    | |||||||| |||||||||||| ||||||||||||||    
T  39627703 atttttagtttccttaacatgtgtaatattgcacatgt 39627740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 36578392 - 36578341
Alignment:
Q  350 aataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| || |||||||||||| || | |||||||||||||||||||||||||    
T  36578392 aataagaaattactacttttaattgctttaacatgtgcaatattgcacatgt 36578341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 401
Target Start/End: Complemental strand, 38539135 - 38539096
Alignment:
Q  362 ctacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  38539135 ctacatttagtttccttaacatgtgcaatattgcacatgt 38539096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 401
Target Start/End: Complemental strand, 38561353 - 38561314
Alignment:
Q  362 ctacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  38561353 ctacatttagtttccttaacatgtgcaatattgcacatgt 38561314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 51467606 - 51467547
Alignment:
Q  258 acatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    ||||||||||||||||||||||| || |||| ||||||||||| | ||||  ||||||||    
T  51467606 acatgttaagaaatttaaaataggaagtttgtattggaacttgtacatttaatattaaat 51467547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 22331702 - 22331632
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||| ||| ||| ||||| |||||||| |||| ||  |||||||||||||| ||||||||||    
T  22331702 taaataattgttgtttttcaagaaaaagttactactattagatattttaacatgtgcaatgttgcacatgt 22331632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 32201783 - 32201737
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaact 298  Q
    |||||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  32201783 atttgcacatattaagaagtttaaaataataaatttgcattggaact 32201737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 6570004 - 6570069
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||||||||||||||||| |||||| ||||||||||   ||||||||||  | |||| ||||||||    
T  6570004 atttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaat 6570069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 400
Target Start/End: Original strand, 11744927 - 11744996
Alignment:
Q  332 taaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatg 400  Q
    ||||||||||||| ||| ||||||||| ||  |||||||| || | ||||||||||||| ||||||||||    
T  11744927 taaataattgttgtttttcaataaaaagtttatacttttaatttctttaacatgtgcaacattgcacatg 11744996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 40799372 - 40799425
Alignment:
Q  346 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacat 399  Q
    |||||||||||| ||  ||||||||||| |  ||||||||||||||||||||||    
T  40799372 tttcaataaaaagttcatacttttagttgctctaacatgtgcaatattgcacat 40799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 13241916 - 13241880
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttg 288  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  13241916 atttgcacatgttaagaaatttaaaatggtaagtttg 13241880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 28016339 - 28016291
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    |||||||||||||||||| |||||||||  || |||| |||||||||||    
T  28016339 atttgcacatgttaagaattttaaaatataaattttgtattggaacttg 28016291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 52798 - 52947
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||  | ||||||||||||| | ||||||| |  | ||||||||||| ||| ||    
T  52798 atttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttt-taatcaataattgttggttttca 52896  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  52897 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 52947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 145836 - 145687
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||||||  | ||||||||||||| | ||||||| |  | ||||||||||| ||| ||    
T  145836 atttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttt-taatcaataattgttggttttca 145738  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  145737 atgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgt 145687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 94037 - 94187
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||| |||||||||| ||| ||||| ||||||| |||||||||||  | |||||||||||||| ||||  ||| |  ||||||||| || | |||||    
T  94037 atttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaataaataattattagttttca 94136  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    |||||||||||||||||||||||   |||||||||||||| ||||| ||||    
T  94137 ataaaaacttactacttttagttgatttaacatgtgcaatgttgcatatgt 94187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 401
Target Start/End: Complemental strand, 13244 - 13095
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||||||||||||||   |||||| |||  | |||| |||||||| | || |||| |  | || |||||||| ||| ||    
T  13244 atttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagcttt-taatcaacaattgttggttttca 13146  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    || |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  13145 atgaaaaattactacttttagttaccttaacatatgcaatattgcacatgt 13095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 37133 - 37283
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||||||||||||| |||||| |  ||||||||  ||||||||||   ||||  |||||||| | || |||| |  ||||||| | |||  |||||    
T  37133 atttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagttttgtttttca 37232  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  37233 ataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgt 37283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 5769 - 5700
Alignment:
Q  334 aataattgttgattt-caataaaaac-ttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||| ||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  5769 aataattgttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcacatgt 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 8433 - 8550
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttcaa 351  Q
    ||||||| ||||||||||||||||| |||||||||||  || |||||||   ||||| |||||||| | ||  ||| |  ||||||||||||| ||||||    
T  8433 atttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgttgttttcaa 8532  T
Q  352 taaaaacttactactttt 369  Q
    |||||| ||| |||||||    
T  8533 taaaaaattaatactttt 8550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 17807 - 17946
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||||||||||||  || || ||||||||||||||  ||||||||||| | |||||||||||||  ||||| ||| |  ||||||||||||   |||||    
T  17807 atttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaagatataaatttttaataaataattgttatttttca 17906  T
Q  351 ataaaaacttactacttttag-ttaccttaacatgtgcaa 389  Q
    |||||| |||  ||||||||| || | |||||||||||||    
T  17907 ataaaagcttgttacttttagtttgctttaacatgtgcaa 17946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 18015 - 18153
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttg-atttca 350  Q
    |||||||| |||||| |  || |||||||||  |||| ||||||| ||| | ||||| |||||||| |||||||||||  |||||||||||||  ||| |    
T  18015 atttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatatataactttctaataaataattgttgtttttta 18114  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaa 389  Q
    || || | |||||||||||| || | |||||| ||||||    
T  18115 attaagagttactacttttaattcctttaacacgtgcaa 18153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 24546 - 24611
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaat 317  Q
    |||| ||||||| ||||||||||||||||||| |||| ||||||| ||||| |||| |||||||||    
T  24546 atttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 391
Target Start/End: Original strand, 3432 - 3572
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgatttc-a 350  Q
    |||||||||| ||||||| |||||| |||| |||||  ||||||||||   | |||| |||||||| | ||||||| |  | ||||||||||| |||  |    
T  3432 atttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaacttt-taatcaataattgttggttttta 3530  T
Q  351 at-aaaaacttactacttttagttaccttaacatgtgcaata 391  Q
    || ||||| ||||||||||||||||| |||||||||||||||    
T  3531 atgaaaaagttactacttttagttacattaacatgtgcaata 3572  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 43568 - 43479
Alignment:
Q  305 ttttgtattaaatgtataactttctgttaaataattgttgattt-caataaaaacttactacttttagttaccttaacatgtgcaatattgc 395  Q
    |||| |||||||| |||||||||   |||| ||||||||||||| |||| |||| |||||||||||| ||||||||||| ||||||||||||    
T  43568 ttttatattaaatatataacttttaattaa-taattgttgattttcaatgaaaaattactactttta-ttaccttaacacgtgcaatattgc 43479  T

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Target: scaffold0073 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 401
Target Start/End: Original strand, 16554 - 16703
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgttgattt-ca 350  Q
    |||||||||||||||||| |||||| || ||  ||||  ||||||||||  |||||| |||| ||| ||||| ||| |  ||||||||||||| ||| ||    
T  16554 atttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaataaataattgttgttttcca 16652  T
Q  351 ataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||| | || |  ||||||||||| ||||||| |||||| ||||| ||||    
T  16653 ataaatagttgccgcttttagttactttaacatatgcaattttgcaaatgt 16703  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 13582 - 13630
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 300  Q
    |||||||||||||||||| |||||| |||||| ||||||||| ||||||    
T  13582 atttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttg 13630  T

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Target: scaffold0631 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 492 - 451
Alignment:
Q  360 tactacttttagttaccttaacatgtgcaatattgcacatgt 401  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  492 tactacttttagttgatttaacatgtgcaatattgcacatgt 451  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 44313 - 44374
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtatt 313  Q
    |||||||||| |||| || |||||||||  |||||||||||| |||||| ||||||| ||||    
T  44313 atttgcacatattaaaaagtttaaaataacaactttgcattgaaacttgtatattttttatt 44374  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 375
Target Start/End: Complemental strand, 182201 - 182079
Alignment:
Q  252 atttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaatattttgtattaaatgtataactttctgttaaataattgtt-gatttca 350  Q
    ||||| |||||||||||| |||||| ||||| | |||  ||| ||||||  | |||| |||||||| | ||||||| |  |||||||||||| | |||||    
T  182201 atttgtacatgttaagaagtttaaagtagta-cgttgatttgaaacttgtgttttttatattaaatatgtaacttt-taataaataattgtttgttttca 182104  T
Q  351 ataaaaacttactacttttagttac 375  Q
    ||||||| ||||||||||| |||||    
T  182103 ataaaaaattactacttttggttac 182079  T

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