View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1892_low_8 (Length: 246)
Name: NF1892_low_8
Description: NF1892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1892_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 10929783 - 10929911
Alignment:
| Q |
48 |
tttcttctcctatacattacagacaaattttcactttcagctttcatttcaaatatcaaatgtcagctcatcccataaaccattaaacgaataaaacgac |
147 |
Q |
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| T |
10929783 |
tttcttctcctatacattacagacaaattttcactttcagctttcatttcaaatatctaatgtcagctcatcccataaactattaaacaaataaaacgac |
10929882 |
T |
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| Q |
148 |
tattccaactcaagtacaactaaaaatac |
176 |
Q |
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| T |
10929883 |
tattccaactcaagtacaactaaaaatac |
10929911 |
T |
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