View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18930_high_7 (Length: 254)
Name: NF18930_high_7
Description: NF18930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18930_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 33 - 236
Target Start/End: Original strand, 8319488 - 8319691
Alignment:
| Q |
33 |
tgtgcttcttgttaaaacatcccttgctttccacttgtatgcttcacgcttaggccattgtcaatttcattctttaatttcattatggtccatgattaat |
132 |
Q |
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| T |
8319488 |
tgtgcttcttgttacaacatcccttgctttccacttgtatgcttcacgcttaggccattgtcaatttcattctttaatttcattatggtccatgattaat |
8319587 |
T |
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| Q |
133 |
taataaactgagtcatgctgttatacacattatcgaccattattaattcacattatcaaccattctacactgtaaaaatctactgctaatgcttcctccc |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8319588 |
taataaactgagtcatgctgttatacacattatcgaccattattaattcacattatcaaccattctacactgtaaaaatctactgctaatgcttcctccc |
8319687 |
T |
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| Q |
233 |
ttca |
236 |
Q |
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|||| |
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| T |
8319688 |
ttca |
8319691 |
T |
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