View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18930_low_2 (Length: 416)

Name: NF18930_low_2
Description: NF18930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18930_low_2
NF18930_low_2
[»] chr8 (74 HSPs)
chr8 (17-407)||(40077630-40078020)
chr8 (92-296)||(28791256-28791460)
chr8 (92-296)||(29638249-29638453)
chr8 (100-247)||(14117459-14117606)
chr8 (141-247)||(8618125-8618231)
chr8 (90-245)||(32241377-32241532)
chr8 (158-295)||(32678984-32679121)
chr8 (92-247)||(41726518-41726671)
chr8 (102-235)||(39998172-39998305)
chr8 (90-247)||(2195465-2195622)
chr8 (108-247)||(14689957-14690096)
chr8 (146-247)||(8418311-8418412)
chr8 (90-245)||(33190862-33191017)
chr8 (142-235)||(41759635-41759728)
chr8 (153-245)||(44790438-44790530)
chr8 (141-244)||(11637140-11637243)
chr8 (102-245)||(5392048-5392191)
chr8 (148-245)||(37219775-37219872)
chr8 (152-247)||(43844898-43844992)
chr8 (153-247)||(7258383-7258477)
chr8 (161-247)||(14748730-14748816)
chr8 (140-245)||(2119715-2119820)
chr8 (161-210)||(23765000-23765049)
chr8 (138-247)||(45197608-45197717)
chr8 (163-247)||(45420965-45421050)
chr8 (138-246)||(15559131-15559239)
chr8 (161-247)||(1494272-1494356)
chr8 (169-247)||(2875118-2875196)
chr8 (153-247)||(10728938-10729032)
chr8 (161-247)||(42412407-42412493)
chr8 (152-245)||(2349349-2349442)
chr8 (161-210)||(9734191-9734240)
chr8 (153-286)||(38252454-38252587)
chr8 (167-247)||(2797037-2797117)
chr8 (141-245)||(5962477-5962581)
chr8 (161-229)||(8394279-8394347)
chr8 (153-245)||(34133126-34133218)
chr8 (100-229)||(5878188-5878318)
chr8 (160-203)||(25266824-25266867)
chr8 (138-245)||(31132729-31132836)
chr8 (141-244)||(31410612-31410715)
chr8 (161-288)||(37459306-37459433)
chr8 (146-245)||(44615374-44615473)
chr8 (138-244)||(25174586-25174692)
chr8 (183-245)||(33925130-33925192)
chr8 (156-235)||(7042761-7042840)
chr8 (156-235)||(29567214-29567293)
chr8 (141-204)||(29730900-29730963)
chr8 (185-247)||(32231768-32231830)
chr8 (108-235)||(33743785-33743912)
chr8 (151-205)||(44225935-44225989)
chr8 (138-210)||(138700-138772)
chr8 (148-241)||(42558592-42558685)
chr8 (166-210)||(886477-886521)
chr8 (161-245)||(38201415-38201499)
chr8 (150-247)||(17005945-17006039)
chr8 (150-247)||(17571209-17571303)
chr8 (140-195)||(26570155-26570210)
chr8 (152-210)||(325131-325189)
chr8 (179-245)||(4274341-4274407)
chr8 (177-235)||(17790110-17790168)
chr8 (102-245)||(28802766-28802909)
chr8 (151-245)||(39171542-39171636)
chr8 (157-210)||(1230383-1230435)
chr8 (138-195)||(9014752-9014809)
chr8 (257-298)||(25267177-25267218)
chr8 (178-247)||(27987655-27987724)
chr8 (178-247)||(28044957-28045026)
chr8 (151-247)||(29451346-29451442)
chr8 (159-235)||(18725918-18725994)
chr8 (181-245)||(29615797-29615861)
chr8 (177-245)||(34287119-34287187)
chr8 (367-407)||(40082104-40082144)
chr8 (153-245)||(45425484-45425576)
[»] chr1 (99 HSPs)
chr1 (65-307)||(36232718-36232960)
chr1 (69-299)||(14352511-14352744)
chr1 (92-245)||(2219404-2219557)
chr1 (65-247)||(27209896-27210078)
chr1 (141-247)||(11425874-11425980)
chr1 (138-247)||(29225410-29225518)
chr1 (152-247)||(4466170-4466265)
chr1 (62-226)||(37280927-37281087)
chr1 (138-295)||(52382388-52382546)
chr1 (92-245)||(51049507-51049659)
chr1 (141-247)||(12267636-12267742)
chr1 (141-247)||(16040074-16040180)
chr1 (102-229)||(37495844-37495969)
chr1 (161-247)||(29756167-29756253)
chr1 (53-183)||(20986505-20986629)
chr1 (108-230)||(37541085-37541207)
chr1 (138-235)||(47293601-47293697)
chr1 (147-247)||(18186217-18186317)
chr1 (65-190)||(36326134-36326259)
chr1 (138-244)||(705351-705457)
chr1 (71-210)||(21304742-21304880)
chr1 (165-247)||(24131429-24131511)
chr1 (90-245)||(52432311-52432466)
chr1 (141-246)||(17342826-17342931)
chr1 (161-247)||(2886168-2886254)
chr1 (153-247)||(29225750-29225844)
chr1 (161-235)||(46363436-46363510)
chr1 (170-296)||(50333883-50334009)
chr1 (102-245)||(51749149-51749292)
chr1 (138-247)||(5115827-5115936)
chr1 (138-247)||(13500731-13500840)
chr1 (161-234)||(40754438-40754511)
chr1 (169-242)||(50086011-50086084)
chr1 (62-130)||(5359206-5359274)
chr1 (153-245)||(5442339-5442431)
chr1 (153-245)||(28277055-28277147)
chr1 (92-245)||(32587764-32587917)
chr1 (153-245)||(36467212-36467304)
chr1 (153-245)||(36784313-36784405)
chr1 (153-245)||(50267455-50267547)
chr1 (108-247)||(26583725-26583864)
chr1 (161-247)||(31798415-31798501)
chr1 (161-247)||(37925271-37925357)
chr1 (142-235)||(27932839-27932932)
chr1 (62-247)||(28706549-28706735)
chr1 (142-235)||(33149282-33149375)
chr1 (188-296)||(16451579-16451687)
chr1 (188-296)||(16460732-16460840)
chr1 (152-247)||(26040638-26040736)
chr1 (141-245)||(46496017-46496121)
chr1 (143-202)||(31634300-31634359)
chr1 (102-210)||(42926168-42926276)
chr1 (152-203)||(50926788-50926839)
chr1 (140-210)||(46273194-46273264)
chr1 (161-210)||(26924145-26924194)
chr1 (153-245)||(19532936-19533028)
chr1 (102-179)||(26040734-26040811)
chr1 (153-245)||(26755975-26756067)
chr1 (62-130)||(52382272-52382340)
chr1 (153-244)||(2571363-2571454)
chr1 (153-244)||(3718866-3718957)
chr1 (177-247)||(7075441-7075514)
chr1 (142-205)||(16956582-16956645)
chr1 (141-210)||(34813951-34814020)
chr1 (146-235)||(48391756-48391845)
chr1 (153-233)||(5563025-5563104)
chr1 (157-245)||(7785295-7785383)
chr1 (153-245)||(8773241-8773333)
chr1 (169-209)||(27142956-27142996)
chr1 (153-245)||(28839338-28839430)
chr1 (183-247)||(35622826-35622890)
chr1 (187-286)||(20988533-20988632)
chr1 (153-240)||(27831850-27831937)
chr1 (108-247)||(39420581-39420722)
chr1 (63-130)||(47792118-47792185)
chr1 (180-247)||(52146699-52146766)
chr1 (102-210)||(52830380-52830488)
chr1 (169-247)||(10587614-10587692)
chr1 (153-247)||(19349012-19349105)
chr1 (153-247)||(30903244-30903338)
chr1 (161-247)||(44580513-44580599)
chr1 (140-210)||(45305887-45305956)
chr1 (102-245)||(49494129-49494272)
chr1 (92-195)||(49944981-49945084)
chr1 (161-210)||(5503454-5503503)
chr1 (140-245)||(8327716-8327821)
chr1 (156-245)||(25983648-25983737)
chr1 (148-245)||(38664400-38664497)
chr1 (153-245)||(45889265-45889357)
chr1 (65-203)||(9590553-9590693)
chr1 (153-245)||(17724731-17724823)
chr1 (146-210)||(26606147-26606211)
chr1 (147-210)||(43895881-43895944)
chr1 (148-235)||(46968088-46968174)
chr1 (153-235)||(5040592-5040674)
chr1 (141-210)||(29678860-29678928)
chr1 (158-247)||(40061806-40061895)
chr1 (92-210)||(46880449-46880567)
chr1 (180-233)||(52146396-52146449)
[»] chr3 (58 HSPs)
chr3 (62-298)||(48409530-48409768)
chr3 (63-247)||(53753990-53754174)
chr3 (92-245)||(51164950-51165104)
chr3 (92-245)||(1334736-1334889)
chr3 (92-295)||(53050975-53051178)
chr3 (92-245)||(54021413-54021566)
chr3 (141-247)||(29858869-29858975)
chr3 (138-247)||(21585411-21585520)
chr3 (99-245)||(38600768-38600914)
chr3 (90-245)||(21296456-21296611)
chr3 (148-245)||(54122235-54122332)
chr3 (90-245)||(43639469-43639624)
chr3 (163-247)||(1923087-1923171)
chr3 (152-247)||(41287259-41287354)
chr3 (141-247)||(32977794-32977900)
chr3 (153-245)||(32827320-32827412)
chr3 (153-247)||(39329766-39329860)
chr3 (90-245)||(9218144-9218299)
chr3 (153-247)||(30261517-30261612)
chr3 (153-247)||(42547122-42547216)
chr3 (158-295)||(50736050-50736182)
chr3 (158-295)||(50776673-50776805)
chr3 (163-247)||(46194233-46194316)
chr3 (138-210)||(54458310-54458382)
chr3 (153-245)||(54493907-54493999)
chr3 (141-245)||(54845520-54845624)
chr3 (92-216)||(9017829-9017953)
chr3 (140-210)||(8498288-8498358)
chr3 (157-247)||(44219053-44219143)
chr3 (171-276)||(47496137-47496242)
chr3 (179-247)||(37041915-37041983)
chr3 (147-203)||(39144686-39144742)
chr3 (141-245)||(39866557-39866661)
chr3 (102-210)||(53876401-53876509)
chr3 (151-245)||(32023115-32023209)
chr3 (152-210)||(48744293-48744351)
chr3 (141-247)||(52325174-52325280)
chr3 (139-188)||(36315735-36315784)
chr3 (153-245)||(41031571-41031666)
chr3 (152-245)||(45392089-45392182)
chr3 (153-245)||(26134719-26134811)
chr3 (153-245)||(33994656-33994748)
chr3 (138-245)||(44234089-44234196)
chr3 (102-210)||(11251092-11251200)
chr3 (161-247)||(27668351-27668437)
chr3 (156-210)||(54782997-54783051)
chr3 (153-245)||(5245411-5245503)
chr3 (156-244)||(26832071-26832159)
chr3 (169-209)||(35300672-35300712)
chr3 (140-247)||(3862176-3862282)
chr3 (161-196)||(36790845-36790880)
chr3 (179-245)||(15280604-15280670)
chr3 (182-244)||(29361610-29361671)
chr3 (181-247)||(50150411-50150477)
chr3 (148-210)||(55415450-55415512)
chr3 (141-210)||(49122138-49122207)
chr3 (178-210)||(29807126-29807158)
chr3 (161-193)||(36790895-36790927)
[»] scaffold0003 (1 HSPs)
scaffold0003 (62-247)||(352388-352571)
[»] chr7 (67 HSPs)
chr7 (92-296)||(2849203-2849407)
chr7 (92-296)||(30659435-30659639)
chr7 (92-247)||(32775980-32776136)
chr7 (63-247)||(39343599-39343781)
chr7 (65-299)||(36070046-36070283)
chr7 (92-232)||(45218113-45218253)
chr7 (141-295)||(18731391-18731542)
chr7 (65-247)||(27337799-27337983)
chr7 (102-247)||(5068266-5068408)
chr7 (161-247)||(38589731-38589817)
chr7 (92-247)||(24288420-24288573)
chr7 (115-245)||(38181852-38181982)
chr7 (102-244)||(7425842-7425985)
chr7 (153-235)||(29997045-29997127)
chr7 (153-247)||(34064212-34064306)
chr7 (153-247)||(37264310-37264404)
chr7 (158-247)||(25778741-25778830)
chr7 (153-247)||(37496413-37496507)
chr7 (153-245)||(5724723-5724815)
chr7 (146-241)||(1643347-1643442)
chr7 (153-244)||(28333171-28333262)
chr7 (153-247)||(9602858-9602952)
chr7 (153-247)||(9830429-9830523)
chr7 (108-207)||(23111060-23111159)
chr7 (145-247)||(30462657-30462759)
chr7 (103-210)||(37490584-37490691)
chr7 (141-243)||(43007895-43007997)
chr7 (152-245)||(31581458-31581551)
chr7 (162-210)||(6838096-6838144)
chr7 (152-235)||(21412050-21412133)
chr7 (103-235)||(2842018-2842150)
chr7 (146-244)||(17266027-17266125)
chr7 (161-247)||(32972042-32972128)
chr7 (62-130)||(18731568-18731636)
chr7 (153-245)||(47454003-47454095)
chr7 (161-247)||(10355759-10355845)
chr7 (153-245)||(11616560-11616653)
chr7 (153-210)||(21387496-21387553)
chr7 (141-245)||(29434584-29434688)
chr7 (153-245)||(40038125-40038219)
chr7 (162-247)||(47238214-47238299)
chr7 (153-245)||(2846692-2846784)
chr7 (161-245)||(23186167-23186251)
chr7 (153-245)||(23703915-23704007)
chr7 (153-245)||(30463015-30463107)
chr7 (153-245)||(33584562-33584654)
chr7 (153-245)||(33774059-33774151)
chr7 (158-244)||(3667898-3667984)
chr7 (161-247)||(14648943-14649029)
chr7 (147-245)||(40590835-40590933)
chr7 (102-245)||(44604443-44604585)
chr7 (179-245)||(46288473-46288539)
chr7 (200-245)||(12308377-12308422)
chr7 (140-205)||(21446475-21446540)
chr7 (153-245)||(18235189-18235281)
chr7 (176-235)||(19505809-19505868)
chr7 (141-244)||(27234503-27234606)
chr7 (102-205)||(23058858-23058960)
chr7 (178-244)||(25940790-25940856)
chr7 (179-245)||(29257546-29257612)
chr7 (156-245)||(37157169-37157259)
chr7 (141-235)||(46095424-46095518)
chr7 (214-247)||(27621838-27621871)
chr7 (161-210)||(30459096-30459145)
chr7 (153-210)||(49100518-49100575)
chr7 (140-208)||(29645237-29645305)
chr7 (165-235)||(32346530-32346597)
[»] chr2 (72 HSPs)
chr2 (62-298)||(1908416-1908655)
chr2 (62-245)||(9724879-9725060)
chr2 (92-296)||(24356059-24356263)
chr2 (62-295)||(43182223-43182454)
chr2 (141-296)||(7931500-7931655)
chr2 (92-247)||(18460485-18460640)
chr2 (92-245)||(7213474-7213627)
chr2 (141-247)||(37529075-37529181)
chr2 (83-247)||(9472419-9472583)
chr2 (91-247)||(18181167-18181323)
chr2 (138-245)||(28572207-28572314)
chr2 (161-247)||(13222065-13222151)
chr2 (102-247)||(3199895-3200038)
chr2 (100-247)||(28844056-28844206)
chr2 (153-247)||(19515878-19515972)
chr2 (138-242)||(3100402-3100506)
chr2 (141-245)||(23684958-23685062)
chr2 (138-245)||(44534484-44534591)
chr2 (92-245)||(28526963-28527116)
chr2 (62-296)||(36748090-36748330)
chr2 (156-235)||(2427369-2427448)
chr2 (140-247)||(4794570-4794677)
chr2 (141-247)||(24451781-24451885)
chr2 (161-247)||(2048289-2048375)
chr2 (92-247)||(8550597-8550752)
chr2 (161-247)||(31348508-31348594)
chr2 (161-247)||(43427110-43427196)
chr2 (158-247)||(4283040-4283129)
chr2 (158-247)||(14384299-14384388)
chr2 (140-245)||(41436078-41436183)
chr2 (108-245)||(2881984-2882121)
chr2 (153-245)||(24775824-24775916)
chr2 (180-247)||(6685706-6685773)
chr2 (92-196)||(38280151-38280255)
chr2 (161-247)||(6972564-6972650)
chr2 (113-247)||(733988-734121)
chr2 (151-245)||(15859359-15859450)
chr2 (153-245)||(28108391-28108483)
chr2 (153-245)||(28301433-28301525)
chr2 (64-197)||(39807260-39807393)
chr2 (161-247)||(928562-928646)
chr2 (140-247)||(2756671-2756778)
chr2 (153-235)||(5211974-5212056)
chr2 (169-235)||(39166728-39166794)
chr2 (161-210)||(314461-314510)
chr2 (138-210)||(8031775-8031847)
chr2 (153-245)||(10818620-10818712)
chr2 (153-245)||(43077742-43077834)
chr2 (141-192)||(14890369-14890420)
chr2 (153-235)||(435094-435176)
chr2 (161-247)||(6723884-6723969)
chr2 (161-230)||(38872946-38873013)
chr2 (138-195)||(565138-565195)
chr2 (102-210)||(13375153-13375263)
chr2 (157-210)||(25604395-25604448)
chr2 (178-235)||(26273768-26273825)
chr2 (153-210)||(28925864-28925921)
chr2 (102-208)||(33755293-33755399)
chr2 (188-245)||(33880157-33880214)
chr2 (102-243)||(10069550-10069691)
chr2 (153-245)||(30757584-30757676)
chr2 (153-245)||(37247900-37247992)
chr2 (153-247)||(31592547-31592641)
chr2 (159-241)||(36396480-36396562)
chr2 (148-210)||(43950459-43950521)
chr2 (140-245)||(7649978-7650083)
chr2 (160-245)||(37028757-37028842)
chr2 (158-247)||(39095628-39095717)
chr2 (141-210)||(40710611-40710679)
chr2 (191-247)||(6075495-6075551)
chr2 (155-210)||(29937932-29937987)
chr2 (178-210)||(43056409-43056441)
[»] scaffold0685 (1 HSPs)
scaffold0685 (92-295)||(6355-6559)
[»] chr6 (33 HSPs)
chr6 (141-247)||(33017948-33018054)
chr6 (141-247)||(33921473-33921579)
chr6 (62-296)||(3166033-3166267)
chr6 (150-307)||(8232324-8232480)
chr6 (103-232)||(3874016-3874145)
chr6 (141-247)||(9354444-9354553)
chr6 (153-245)||(31265778-31265870)
chr6 (161-247)||(15371887-15371973)
chr6 (153-245)||(3604616-3604708)
chr6 (153-245)||(4238421-4238512)
chr6 (141-210)||(14312652-14312721)
chr6 (108-247)||(34803676-34803817)
chr6 (153-245)||(15081422-15081514)
chr6 (161-247)||(4552906-4552992)
chr6 (138-188)||(20027638-20027688)
chr6 (141-210)||(14306245-14306314)
chr6 (141-245)||(7301084-7301188)
chr6 (161-247)||(15321249-15321335)
chr6 (166-235)||(2310317-2310386)
chr6 (138-210)||(34915814-34915886)
chr6 (156-247)||(28538993-28539084)
chr6 (180-246)||(26356267-26356333)
chr6 (148-216)||(7167777-7167845)
chr6 (138-244)||(2657901-2658007)
chr6 (148-210)||(7739529-7739591)
chr6 (161-235)||(15351407-15351481)
chr6 (161-210)||(15355609-15355658)
chr6 (154-210)||(9755164-9755220)
chr6 (141-245)||(30063953-30064057)
chr6 (159-194)||(34442134-34442169)
chr6 (161-235)||(15325156-15325230)
chr6 (153-215)||(16126240-16126302)
chr6 (153-247)||(20383843-20383936)
[»] chr4 (82 HSPs)
chr4 (99-245)||(35998079-35998225)
chr4 (92-245)||(39052856-39053009)
chr4 (99-247)||(10099687-10099835)
chr4 (92-296)||(29550682-29550886)
chr4 (62-247)||(25149448-25149634)
chr4 (141-296)||(28279785-28279940)
chr4 (141-247)||(44633154-44633259)
chr4 (92-240)||(48400586-48400734)
chr4 (67-247)||(55360278-55360458)
chr4 (69-247)||(42051588-42051766)
chr4 (153-245)||(18849775-18849867)
chr4 (102-245)||(34790916-34791060)
chr4 (141-247)||(4354445-4354551)
chr4 (108-235)||(20964259-20964386)
chr4 (161-247)||(42132810-42132896)
chr4 (89-247)||(41436478-41436636)
chr4 (156-291)||(37315941-37316076)
chr4 (102-245)||(4357567-4357709)
chr4 (77-224)||(35029055-35029202)
chr4 (161-247)||(38319908-38319994)
chr4 (158-307)||(49401593-49401742)
chr4 (141-229)||(25902466-25902554)
chr4 (105-245)||(54729452-54729591)
chr4 (161-247)||(28330791-28330877)
chr4 (141-235)||(32949853-32949947)
chr4 (142-247)||(3505719-3505823)
chr4 (92-210)||(30680393-30680511)
chr4 (103-245)||(49306586-49306728)
chr4 (161-245)||(8759778-8759862)
chr4 (138-246)||(27977145-27977253)
chr4 (153-245)||(39979779-39979871)
chr4 (108-208)||(13719811-13719911)
chr4 (152-247)||(22872403-22872498)
chr4 (160-247)||(47277705-47277792)
chr4 (160-247)||(47846896-47846982)
chr4 (179-245)||(1796284-1796350)
chr4 (141-247)||(17237040-17237146)
chr4 (161-235)||(36047124-36047198)
chr4 (92-234)||(28974316-28974458)
chr4 (142-235)||(37786970-37787063)
chr4 (155-247)||(51572246-51572338)
chr4 (141-244)||(4360412-4360515)
chr4 (153-245)||(47787863-47787955)
chr4 (102-247)||(49448838-49448983)
chr4 (163-235)||(54217351-54217423)
chr4 (92-244)||(16493253-16493403)
chr4 (151-245)||(3686010-3686104)
chr4 (156-245)||(38976990-38977080)
chr4 (102-245)||(41203736-41203879)
chr4 (153-247)||(46958719-46958813)
chr4 (141-210)||(55293509-55293579)
chr4 (92-245)||(8295030-8295181)
chr4 (148-245)||(37309697-37309794)
chr4 (153-210)||(38614979-38615036)
chr4 (153-245)||(42024217-42024309)
chr4 (157-245)||(44020782-44020870)
chr4 (138-210)||(52677032-52677104)
chr4 (161-235)||(11583895-11583969)
chr4 (138-216)||(19688343-19688421)
chr4 (102-205)||(35909538-35909641)
chr4 (141-247)||(38160156-38160262)
chr4 (141-247)||(40020952-40021058)
chr4 (161-235)||(49218807-49218880)
chr4 (141-202)||(5291706-5291767)
chr4 (178-247)||(22020551-22020620)
chr4 (141-210)||(33093464-33093532)
chr4 (161-226)||(43421318-43421383)
chr4 (160-245)||(48740519-48740604)
chr4 (161-210)||(51527452-51527501)
chr4 (161-210)||(53848680-53848729)
chr4 (153-245)||(31862793-31862880)
chr4 (153-245)||(49812228-49812320)
chr4 (178-245)||(12619687-12619754)
chr4 (178-209)||(25125117-25125148)
chr4 (198-245)||(29815158-29815205)
chr4 (138-245)||(42185797-42185904)
chr4 (179-245)||(41710186-41710252)
chr4 (153-210)||(9093778-9093835)
chr4 (158-247)||(20294012-20294101)
chr4 (146-210)||(21954439-21954503)
chr4 (150-247)||(29136802-29136899)
chr4 (153-210)||(50328087-50328144)
[»] chr5 (66 HSPs)
chr5 (141-247)||(5357822-5357928)
chr5 (141-235)||(25108582-25108676)
chr5 (141-235)||(25167674-25167768)
chr5 (141-235)||(25111153-25111247)
chr5 (141-235)||(25170244-25170338)
chr5 (92-247)||(36006851-36007003)
chr5 (141-247)||(16926096-16926200)
chr5 (90-245)||(35646043-35646198)
chr5 (62-235)||(4044404-4044576)
chr5 (92-245)||(11099433-11099586)
chr5 (141-247)||(10044665-10044771)
chr5 (141-247)||(16883936-16884042)
chr5 (92-247)||(36469050-36469205)
chr5 (100-245)||(6610836-6610981)
chr5 (153-245)||(8369713-8369805)
chr5 (141-245)||(8692823-8692927)
chr5 (62-247)||(43525475-43525644)
chr5 (162-247)||(42818901-42818985)
chr5 (92-245)||(42575594-42575747)
chr5 (62-206)||(35968758-35968902)
chr5 (141-227)||(39060427-39060513)
chr5 (93-235)||(36446644-36446786)
chr5 (141-245)||(33988199-33988303)
chr5 (138-235)||(791985-792079)
chr5 (156-247)||(15898188-15898279)
chr5 (138-245)||(22582874-22582980)
chr5 (177-247)||(19889574-19889644)
chr5 (141-247)||(32539659-32539765)
chr5 (179-245)||(39008128-39008193)
chr5 (92-247)||(39183583-39183738)
chr5 (138-247)||(15254762-15254871)
chr5 (141-247)||(30437744-30437852)
chr5 (166-235)||(39060984-39061053)
chr5 (138-210)||(5147498-5147570)
chr5 (153-245)||(7613706-7613798)
chr5 (156-247)||(5072947-5073038)
chr5 (156-243)||(38978905-38978992)
chr5 (161-235)||(7871323-7871396)
chr5 (161-235)||(13016389-13016462)
chr5 (159-229)||(16954880-16954949)
chr5 (156-244)||(6735377-6735465)
chr5 (99-247)||(17741134-17741284)
chr5 (153-247)||(39212567-39212662)
chr5 (161-235)||(13087767-13087840)
chr5 (161-235)||(31090313-31090387)
chr5 (153-247)||(35988631-35988725)
chr5 (179-245)||(42211332-42211398)
chr5 (159-247)||(72128-72216)
chr5 (90-247)||(6629349-6629504)
chr5 (152-245)||(20189891-20189984)
chr5 (153-245)||(858334-858426)
chr5 (92-245)||(3725185-3725338)
chr5 (153-245)||(25814363-25814455)
chr5 (179-245)||(35334569-35334635)
chr5 (178-247)||(6173022-6173091)
chr5 (151-247)||(16283602-16283698)
chr5 (153-245)||(17242971-17243063)
chr5 (179-247)||(17699330-17699398)
chr5 (161-235)||(25344763-25344837)
chr5 (153-247)||(41268335-41268429)
chr5 (164-245)||(13135752-13135833)
chr5 (141-202)||(20364580-20364641)
chr5 (161-201)||(4194975-4195015)
chr5 (143-235)||(4475255-4475347)
chr5 (138-210)||(24231044-24231116)
chr5 (317-357)||(39061135-39061175)
[»] scaffold0262 (1 HSPs)
scaffold0262 (114-246)||(12413-12545)
[»] scaffold0006 (1 HSPs)
scaffold0006 (153-245)||(229822-229914)
[»] scaffold0086 (1 HSPs)
scaffold0086 (92-245)||(5817-5968)
[»] scaffold0221 (1 HSPs)
scaffold0221 (161-235)||(10815-10889)
[»] scaffold0155 (1 HSPs)
scaffold0155 (161-247)||(7978-8064)
[»] scaffold0020 (1 HSPs)
scaffold0020 (148-247)||(171223-171322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (148-245)||(394777-394874)
[»] scaffold0250 (1 HSPs)
scaffold0250 (62-130)||(20569-20637)
[»] scaffold0007 (1 HSPs)
scaffold0007 (153-245)||(230255-230347)
[»] scaffold0058 (1 HSPs)
scaffold0058 (157-245)||(14455-14543)
[»] scaffold0576 (1 HSPs)
scaffold0576 (161-210)||(599-648)
[»] scaffold0034 (1 HSPs)
scaffold0034 (92-245)||(98824-98977)
[»] scaffold0045 (1 HSPs)
scaffold0045 (179-245)||(26321-26387)
[»] scaffold0028 (1 HSPs)
scaffold0028 (155-245)||(26612-26702)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 407
Target Start/End: Original strand, 40077630 - 40078020
Alignment:
Q  17 acttgctagaaaaatatgttatgtttatttaatttattacccccgccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgta 116  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40077630 acttgctagaaaaatatgttatgtttatttaatttattactctcgccgtcccaatttaattgagtaagttgagcttttcactcatattaagaaaagtgta 40077729  T
Q  117 taaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagt 216  Q
    ||||||||||||||       ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  40077730 taaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatttggagt 40077829  T
Q  217 tgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagattcctgagagaatannnnnnnaa 316  Q
    |||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||  ||||| ||||        |    
T  40077830 tgtgaaagtaatattaatttgagttataattgaaaaaaagtaattaatgttgtatcaaaaactgaaatgggtcaagatttttgagacaatatttttttta 40077929  T
Q  317 aaatgattcagttattacgggagggatgaagtaattaattactaattgtgttgtgttgctagtgattggcaaggctgatgtatatgatgat 407  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40077930 aaatgattcagttatttcgggacggatggagtaattaattactaattgtgttgtgttgctagtgattggcaaggctgatgtatatgatgat 40078020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 28791460 - 28791256
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||||||||||||  ||||||||       |  |||||||||  ||| | ||||||||||||||||||||||||||||||||||    
T  28791460 tttcacacagattaagaaaagtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgta 28791361  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    || || ||||||||||||| | |||||||||||||||||||||| |||||||||||        ||||||||||||| ||  |||| |||||||| ||||    
T  28791360 aactagaatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatgttgcattgaaaagtgaaatgggtcaa 28791261  T
Q  292 gattc 296  Q
    |||||    
T  28791260 gattc 28791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 29638453 - 29638249
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||||||||||||||||||| ||       || |||||| ||  ||||| |||||||||| |||| ||||||||||||||||||    
T  29638453 tttcacacagattaagaaaagtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaatgta 29638354  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| ||||||||||||| | ||| ||||||||| |||||||| |||||||||||        ||||||||||||||||  |||| |||||||| ||||    
T  29638353 aagtataatatattgaattaggagtggtgaaagtaatattaattagagttataattgagaaaaggtaattaatgttgtattgaaaagtgaaatgggtcaa 29638254  T
Q  292 gattc 296  Q
    |||||    
T  29638253 gattc 29638249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 247
Target Start/End: Complemental strand, 14117606 - 14117459
Alignment:
Q  100 agattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaa 199  Q
    ||||||||||||||||||||| |||||||||       |  |||||||||  ||| | ||||||||||| ||||||||||||||||||||||||||  ||    
T  14117606 agattaagaaaagtgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaa 14117507  T
Q  200 tatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||  |||||||||||||| |||||||| |||||||||||    
T  14117506 tatattgaattgaaagttgtgaaagtaatattaattagagttataatt 14117459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 8618231 - 8618125
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||| || ||| |||||||||||  |||    
T  8618231 ttttaagtgtttttgttaagtattggtgcattattctttatcataaatgtaaaatataatatattgaattggaagtggtaaaaatagtattaattaaagt 8618132  T
Q  241 tataatt 247  Q
    |||||||    
T  8618131 tataatt 8618125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 32241377 - 32241532
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || ||||||| || |||||||||||| |||||       ||||||| |||||| ||||||||||||| ||||||||||  |||||||||||    
T  32241377 cttttcacacatattaagacaaatgtataaatgaaggagagataaaaatgattttaagtgttcttgttaagtattgatgcattcttcactatcataaatg 32241476  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     |||||  |||||| |||||| ||||||||||||||| |||||||| |||||||||    
T  32241477 caaagtggaatataatgaattggaagttgtgaaagtaatattaattagagttataa 32241532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 32679121 - 32678984
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngt 257  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||   |||||| ||||||||||||||| |||||||||||        ||    
T  32679121 aagtattggtgcattattctttatcataaatgtaaagtaaaatatattaaattgagagttgtaaaagtagtattaattagagttataattgaaaaaaggt 32679022  T
Q  258 aattaatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    ||||||||||||||  |||| |||||||| | ||||||    
T  32679021 aattaatgttgtattgaaaagtgaaatgggtgaagatt 32678984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 41726671 - 41726518
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| |||||||| |||||||||       |  |||||||||  ||| | |||||||| |||||||||||||||||||||||||    
T  41726671 tttcacacagattaagaaaaatgtataaaagaaagagagaaata--tagttttgagtgcctttttcaagtattgttgcattcttctttatcataaatgta 41726574  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||  ||||||||||    
T  41726573 aagtagaatatattgaattgggagttgtgaaattagtattaattacagttataatt 41726518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 39998305 - 39998172
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||||||| |||||||||||||||||       ||||||| ||||| ||| | ||||||| | ||||||||||||||||||||||||||||| ||||    
T  39998305 attaagaaaagagtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtatttgagcattcttctttatcataaatgtaaagtagaata 39998206  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||   ||| ||||||||||||||||||    
T  39998205 tattgaattgagagtggtgaaagtagtattaatt 39998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 2195622 - 2195465
Alignment:
Q  90 cttttcactcagattaagaaaa-gtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    |||||||| || |||||||||| |||||||| ||||||||||       |  |||||||||| || |||||||||||||||||||||  |||||||||||    
T  2195622 cttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtctt-gttaagtattggtgcattctttcttatcataaat 2195524  T
Q  189 gtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    | |||||| ||||||||||||| | |||  ||||||||||||||||| |||||||||||    
T  2195523 gcaaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataatt 2195465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 14690096 - 14689957
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||||||||||| ||||||||||       || ||||||||||  || | || ||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  14690096 aaaagtgtataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattggtgcattcttttttatcataaatgcaaagtagaatatattga 14689997  T
Q  208 atttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||| | ||| |||||||||||||||||| | |||||||||    
T  14689996 attgggagtggtgaaagtagtattaattagtgttataatt 14689957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 8418311 - 8418412
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||| ||||||   |||  ||||||||||||||||| |||||||||    
T  8418311 agtgtttttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagttataa 8418410  T
Q  246 tt 247  Q
    ||    
T  8418411 tt 8418412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 33190862 - 33191017
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || ||||||| || ||||||||||||  ||||       ||||||| |||||| ||||||||||||  |||||||| |  |||||||||||    
T  33190862 cttttcacacatattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgttcttgttaagtattaatgcattctccactatcataaatg 33190961  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     | |||  ||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  33190962 catagtggaatatattgaattggaagttgtgaaagtagtactaattagagttataa 33191017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 41759635 - 41759728
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||| ||||||||| ||||||||    
T  41759635 tttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagtaaaatatattgaattgggagtagtgaaagtaatattaatt 41759728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 44790438 - 44790530
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  |||||||||||||||||  ||||||||||||| | | | |||||||||||||||||| |||||||||    
T  44790438 ttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatattgaattgggaatggtgaaagtagtattaattagagttataa 44790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 11637243 - 11637140
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||  |||||||| | |||| ||||||||||||||||||||||| |||||||||||||   ||| ||||||||||||||||||  |||    
T  11637243 ttttgagtgtctttgccaagtattgatacattattctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattatagt 11637144  T
Q  241 tata 244  Q
    ||||    
T  11637143 tata 11637140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 5392191 - 5392048
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||| || |||||||||||| |||||       || |||| |||| |||||| ||||||||||||||||| |  ||||||||||| |||||  ||||    
T  5392191 attaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgcattctccactatcataaatgcaaagtggaata 5392092  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| | |||  ||||||||||||||||| |||||||||    
T  5392091 tattgaattgggagtgttgaaagtagtattaattagagttataa 5392048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 37219775 - 37219872
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||| ||||||||||| |||||||||| | ||||||||||| |||||| ||||||||| ||||  |||||||||||||| |||||| | |||||||||    
T  37219775 tgttgttgttaagtatgggtgcattctcccttatcataaatataaagtgaaatatattaaattgaaagttgtgaaagtattattaactagagttataa 37219872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 43844898 - 43844992
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||||  | |||||||||||||||||||||||||||||||| | || ||| |||||| ||||||| ||||||| |||||||||||    
T  43844898 tttgtcaagtattggtatactcttctttatcataaatgtaaagtaaaatataattaa-ttggagttgttaaagtagaattaattagagttataatt 43844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 7258383 - 7258477
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||  || |||||||||||| ||| || ||||||||||||| | |||  ||||||||||||||||| |||||||||||    
T  7258383 ttgtcaagtattggtgcatttatcattatcataaatgcaaactagaatatattgaattgggagtgatgaaagtagtattaattagagttataatt 7258477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 14748730 - 14748816
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||   | | |||||||||||||||||| | |||||||||    
T  14748730 tattagtgcattcttctttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgttataatt 14748816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 2119820 - 2119715
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||| ||||||  |||||  ||||||| |||||||| ||||||||||||||||||  |||||| |||||| |||||||||||| ||  ||||||| |||    
T  2119820 attttaagtgttcctgttatatattggtacattcttcattatcataaatgtaaagtggaatatactgaattagaagttgtgaaaataagattaattagag 2119721  T
Q  240 ttataa 245  Q
    ||||||    
T  2119720 ttataa 2119715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 23765049 - 23765000
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23765049 tattggtgcactcttctttatcataaatgtaaagtaaaatatattgaatt 23765000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 45197717 - 45197608
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||||||||||||||||||| ||||||||||  | ||||||||||||| | ||||||||||||||   |||  ||||| || |||||||| |    
T  45197717 tgattttaagtgtttttgttaagtattgatgcattcttcactgtcataaatgtaaaatgaaatatattgaattgagagtgatgaaattactattaattag 45197618  T
Q  238 agttataatt 247  Q
    || |||||||    
T  45197617 agctataatt 45197608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 45420965 - 45421050
Alignment:
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtg-aaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||  | ||| ||| ||||||||||||||| | |||||||||    
T  45420965 ttggagcattcttctttatcataaatgcaaagtaaaatatattgaatcaggagtggtgaaaagtagtattaattagtgttataatt 45421050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 15559131 - 15559239
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||||| |||| ||||||||||| |||   | |||||||||||| |||||| ||||||||||||| | |||  ||||||| ||||||||| |    
T  15559131 tgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgcaaagtagaatatattgaattaggagtgatgaaagtggtattaattag 15559230  T
Q  238 agttataat 246  Q
    |||||||||    
T  15559231 agttataat 15559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 1494272 - 1494356
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||  ||| ||||| ||||||||| |||||||| | |||||||||    
T  1494272 tattgatgcattcttctttatcataaatgcaaagtagaatatatt--attagaagtagtgaaagtaatattaattagtgttataatt 1494356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 2875118 - 2875196
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| |||||||||||| |||||| ||||||||||||||  ||   ||||||||||||||||| |||||||||||    
T  2875118 cattcttccttatcataaatgcaaagtagaatatattgaatttagaggaatgaaagtagtattaattagagttataatt 2875196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 10728938 - 10729032
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||||||||||  |||||||||||| |||||  ||||||||||||| | |||  | ||||||||||||||| |||||| ||||    
T  10728938 ttgttaagtatttgtgcattctttcttatcataaatgcaaagtggaatatattgaattgggagtgattaaagtagtattaattagagttacaatt 10729032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 42412407 - 42412493
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||| | |||||||||||| |||||  ||||||||||||| | |||  ||||||||||||||||| ||| |||||||    
T  42412407 tattggtgcattctccattatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagctataatt 42412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 2349442 - 2349349
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| ||||||||| |  ||||||||||||||| |  ||||||||||||| ||| |  |||||||| |||||||| |||||||||    
T  2349442 tttgttaagtatttgtgcattctccactatcataaatgtaaattggaatatattgaattggaaatgttgaaagtaatattaattagagttataa 2349349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 9734191 - 9734240
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9734191 tattggtgcattcttctttatcataaatgcaaagtaaaatatattaaatt 9734240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 286
Target Start/End: Original strand, 38252454 - 38252587
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnn 252  Q
    |||||||||||| ||||||||| |  | |||||||||||||||  ||||||||||||| ||| |  ||||||||||||| ||| |||||||||           
T  38252454 ttgttaagtattagtgcattctccactgtcataaatgtaaagtggaatatattgaattggaaatgatgaaagtagtattgattagagttataaagggaaa 38252553  T
Q  253 nnngtaattaatgttgtatcaaaaactgaaatgg 286  Q
       ||||||||| |||||||||||| ||||||||    
T  38252554 aaagtaattaatattgtatcaaaaagtgaaatgg 38252587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 2797117 - 2797037
Alignment:
Q  167 tgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||  |||||||||||| |||||| ||||||||||||| | |||  |||||||| |||||||| |||||||||||    
T  2797117 tgcattcttacttatcataaatgcaaagtagaatatattgaattgggagtaatgaaagtaatattaattagagttataatt 2797037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 5962477 - 5962581
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||| |||||||||||||||||||||||| |  ||| ||||||| |||||  ||||||||||||| | |||  ||||| || |||||||| ||||    
T  5962477 ttttaagtgcttttgttaagtattggtgcattctccactattataaatgcaaagtggaatatattgaattgggagtgatgaaattaatattaattagagt 5962576  T
Q  241 tataa 245  Q
    |||||    
T  5962577 tataa 5962581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 8394279 - 8394347
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagta 229  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||   ||| ||||||||||||    
T  8394279 tattggtgcattattctttatcataaatacaaagtaaaatatattgaattgagagtggtgaaagtagta 8394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 34133218 - 34133126
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||| ||||||| |  ||||||||||||||| | |||||||||||||| ||  |  |||||||| |||||||| |||||||||    
T  34133218 ttgttaagtattggcgcattctccactatcataaatgtaaaatgaaatatattgaattggatatgatgaaagtaatattaattggagttataa 34133126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 5878188 - 5878318
Alignment:
Q  100 agattaagaaaagtgtataaatgaaagagagnnnnnnn--tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaa 197  Q
    |||||||||||||||||||||||||||||||         || |||| | ||| ||||| ||||||| || |||||| ||| |||||||||||||||||     
T  5878188 agattaagaaaagtgtataaatgaaagagagagagaaaaatggttttaaatgtctttgtcaagtattagttcattctactt-atcataaatgtaaagtag 5878286  T
Q  198 aatatattgaatttgaagttgtgaaagtagta 229  Q
    |||||||||||||   |||||||||| |||||    
T  5878287 aatatattgaattgagagttgtgaaattagta 5878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 25266824 - 25266867
Alignment:
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatata 203  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  25266824 gtattggtgcattcttctttatcataaatgtaaagtagaatata 25266867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 31132836 - 31132729
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| | |||||||||||||||  ||||| |  ||||||||||| ||| |  |||||| | ||||  ||||||||||||||||||||||| |    
T  31132836 tgattttaagtgctcttgttaagtattggtatattctccagtatcataaatgcaaaatggaatataatcaattgaaagttgtgaaagtagtattaattag 31132737  T
Q  238 agttataa 245  Q
    ||||||||    
T  31132736 agttataa 31132729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 31410612 - 31410715
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||||||||||||| |||||||||||| | |  ||||||||||| |||||  |||||||||||||   |||  |||||||||||||||||  |||    
T  31410612 ttttaagtgtttttgttaaatattggtgcattatacactatcataaatgcaaagtggaatatattgaattaagagtaatgaaagtagtattaattaaagt 31410711  T
Q  241 tata 244  Q
    ||||    
T  31410712 tata 31410715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 288
Target Start/End: Complemental strand, 37459433 - 37459306
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaat 260  Q
    ||||| || |||||||||||||||||||| |||||  |||||||| |||| | ||| ||||||||||||| |||| |  ||||||||        |||||    
T  37459433 tattgatgtattcttctttatcataaatgcaaagttgaatatattaaattgggagtggtgaaagtagtatcaattagtattataattagaaaaaagtaat 37459334  T
Q  261 taatgttgtatcaaaaactgaaatggat 288  Q
    |||| |||||| ||||| ||||||||||    
T  37459333 taatattgtattaaaaagtgaaatggat 37459306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 44615374 - 44615473
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||| ||||| |  ||| ||||||| |||||| |||||||||||||   |||  ||||| || |||||||| |||||||||    
T  44615374 agtgtttttgttaagtattggtgaattctccactattataaatgcaaagtagaatatattgaattgagagtgatgaaaataatattaattagagttataa 44615473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 25174586 - 25174692
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||||||   || |||| |||||||||||| |||||||| ||||||| |||||| |||||||||||||   ||| | ||||||| |||||||| |    
T  25174586 tgattttgagtgcccttattaactattggtgcattattctttattataaatgcaaagtagaatatattgaattgagagtagggaaagtaatattaattag 25174685  T
Q  238 agttata 244  Q
     ||||||    
T  25174686 tgttata 25174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 33925130 - 33925192
Alignment:
Q  183 ataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| |||||  |||||||||||||  ||||||||||||||||||||||| |||||||||    
T  33925130 ataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 33925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 7042840 - 7042761
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||||||||   ||||||||||||||||||  |||||||  |||| |||||  ||||| |||||||||||    
T  7042840 ttaagtattggtgcattctctattatcataaatgtaaagtggaatatataaaattggaagtgatgaaaatagtattaatt 7042761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 29567293 - 29567214
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||| ||||||||  | |||||||||||  |||||||||||||||| |||   |||| |||||||||||||||||    
T  29567293 ttaagtattagtgcattcaccattatcataaatacaaagtaaaatatattgcattaagagttatgaaagtagtattaatt 29567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 29730900 - 29730963
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatat 204  Q
    |||| |||||| |||||||||||||||||||||| |  ||||||||||| |||||| |||||||    
T  29730900 ttttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaagtagaatatat 29730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 32231768 - 32231830
Alignment:
Q  185 aaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||||||||||||||| | ||| ||||||||| |||||||| | |||||||||    
T  32231768 aaatgcaaagtaaaatatattgaattgggagtggtgaaagtattattaattagtgttataatt 32231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 33743912 - 33743785
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||||||||||||||||||||||       ||  |||||||||  || | || |||| |||||||||||||||||||||||  |||||| |||||||| |    
T  33743912 aaaagtgtataaatgaaagagagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaatacaaagtagaatatattaa 33743813  T
Q  208 atttgaagttgtgaaagtagtattaatt 235  Q
    |||   |||  |||||||| ||||||||    
T  33743812 attgtgagtgatgaaagtaatattaatt 33743785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 44225935 - 44225989
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatatt 205  Q
    ||||||||||||||||||||||| | || |||||||||| |||||| ||||||||    
T  44225935 ttttgttaagtattggtgcattcattttcatcataaatgcaaagtagaatatatt 44225989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 138700 - 138772
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctt-tatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| ||||||||||||| ||||||||| ||| ||||| ||||||||||| |||||  |||||||||||||    
T  138700 tgattttaagtgtttttgttatgtattggtggatt-ttcttctatcataaatgcaaagtggaatatattgaatt 138772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 42558592 - 42558685
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagtt 241  Q
    |||| |||||||||||||||  ||||| |  ||||||||||| |||||  |||||||||||||   |||  ||||||||||||||||| |||||    
T  42558592 tgttcttgttaagtattggtttattctccactatcataaatgcaaagtggaatatattgaattaagagtgatgaaagtagtattaattagagtt 42558685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 886477 - 886521
Alignment:
Q  166 gtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||    
T  886477 gtgcattcttctttatcataaatgcaaagtagaatatatcgaatt 886521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 38201415 - 38201499
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||| |||||||| | ||||||||||||| ||| || | ||||||||||| | |||  |||||||| |||||||| |||||||||    
T  38201415 tatttgtgcattcatttttatcataaatgcaaattagagtatattgaattgggagtaatgaaagtaatattaattagagttataa 38201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 17006039 - 17005945
Alignment:
Q  150 tttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| || |||| ||||| |  ||||||||||||||| |||||| ||||||||||||| | |||  ||||   |||||||||| |||||||||||    
T  17006039 tttttgtcaaatatttgtgcaattatctttatcataaatgcaaagtagaatatattgaattgggagtgatgaa---agtattaattagagttataatt 17005945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 17571209 - 17571303
Alignment:
Q  150 tttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| || |||| ||||| |  ||||||||||||||| |||||| ||||||||||||| | |||  ||||   |||||||||| |||||||||||    
T  17571209 tttttgtcaaatatttgtgcaattatctttatcataaatgcaaagtagaatatattgaattgggagtgatgaa---agtattaattagagttataatt 17571303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 26570155 - 26570210
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagt 195  Q
    |||||||||| |||||| |||||||| ||||||| || |||||||||||| |||||    
T  26570155 attttgagtgattttgtcaagtattgatgcattcgtcattatcataaatgcaaagt 26570210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 325131 - 325189
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||| ||||||||||||||||  | ||||||||||| ||||||  |||||||||||||    
T  325131 tttgtcaagtattggtgcattcaccgttatcataaatataaagtggaatatattgaatt 325189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 4274341 - 4274407
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| ||||| ||||||||||||||   ||| |||||| || |||||||| |||||||||    
T  4274341 tatcataaatgcaaagtgaaatatattgaattgagagtggtgaaaataatattaattagagttataa 4274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 17790110 - 17790168
Alignment:
Q  177 tttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||| ||||||| |||||||||| || ||||| |||||| || ||||||||    
T  17790110 tttatcataaatataaagtagaatatattgatttggaagtggtgaaaataatattaatt 17790168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 28802909 - 28802766
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||| || ||||||||||||||||||       || |||| |||| | ||||||||||||| |  ||||| |  ||||||||||| |||||  ||||    
T  28802909 attaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatctattctccactatcataaatgcaaagtggaata 28802810  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||   |||  ||||| || |||||||| |||||||||    
T  28802809 tattgaattgagagtgatgaaaatattattaattagagttataa 28802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 39171636 - 39171542
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||| |||||| |    ||||||||||| |||||  |||||||||||||   |||  ||||| ||||||||||| |||||||||    
T  39171636 ttttgttaagtattgatgcattatctactatcataaatgcaaagtggaatatattgaattgtgagtgatgaaaatagtattaattagagttataa 39171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 1230383 - 1230435
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||| | | |||||||||||| |||||| |||||||||||||    
T  1230383 taagtattggtgcatt-tccattatcataaatgcaaagtagaatatattgaatt 1230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 9014809 - 9014752
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagt 195  Q
    ||||||| |||| ||||||||||||||| |||||||| |  ||||||||||| |||||    
T  9014809 tgattttaagtgcttttgttaagtattgatgcattctccactatcataaatgcaaagt 9014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 25267177 - 25267218
Alignment:
Q  257 taattaatgttgtatcaaaaactgaaatggatcaagattcct 298  Q
    |||||||||||||||  ||||||||||||| |||||||||||    
T  25267177 taattaatgttgtattgaaaactgaaatgggtcaagattcct 25267218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 27987724 - 27987655
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||| | ||||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  27987724 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 27987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 28045026 - 28044957
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||| | ||||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  28045026 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 28044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 29451442 - 29451346
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttg-tgaaagtagtattaatttgagttataatt 247  Q
    |||||| ||||||| ||| ||||||  |||||||||||  |||||| ||||||||||| |||| | || ||||||||||| ||||| || ||||||||    
T  29451442 ttttgtcaagtattagtgtattctttcttatcataaatccaaagtataatatattgaa-ttgagggtgatgaaagtagtactaattagatttataatt 29451346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 18725994 - 18725918
Alignment:
Q  159 agtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||| |||||| ||| |||| |||||||||||||| |||||||| ||||   |||  |||||||| ||||||||    
T  18725994 agtattgatgcatttttcattattataaatgtaaagtagaatatatttaattaagagtaatgaaagtaatattaatt 18725918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 29615861 - 29615797
Alignment:
Q  181 tcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||||||||||| | | |  |||||||||||||||||  ||||||||    
T  29615861 tcataaatgtaaagtggaatatattgaattgggaatgatgaaagtagtattaattaaagttataa 29615797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 34287119 - 34287187
Alignment:
Q  177 tttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||| ||||||||||||  ||||||||||||| ||| |  |||||||| |||||||| || ||||||    
T  34287119 tttatcgtaaatgtaaagtggaatatattgaattagaaatgatgaaagtaatattaattagaattataa 34287187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 40082104 - 40082144
Alignment:
Q  367 ttgtgttgctagtgattggcaaggctgatgtatatgatgat 407  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  40082104 ttgtgttacaagtgattggcaaggctgatatatatgatgat 40082144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 45425576 - 45425484
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| |||||| | |  ||||||||||| |||||  |||||||| |||| | | |  |||||||| |||||||| |||||||||    
T  45425576 ttgttaagtattgatgcattttccactatcataaatgcaaagtggaatatattaaattaggaatgatgaaagtaatattaattagagttataa 45425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 65 - 307
Target Start/End: Original strand, 36232718 - 36232960
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtatt 164  Q
    ||||||||||||||||| |||| | |||||||  |||||||||||||||||||||| |||||||||       ||||||||||||| ||||  |||||||    
T  36232718 tcccaatttaattgagttagtttaacttttcatacagattaagaaaagtgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtatt 36232817  T
Q  165 ggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaat 264  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||| | |||||||||||||||||| |||||||||||        |||||||||    
T  36232818 ggtgcattcttctttatcataaatataaagtagaatatattgaattggaaatggtgaaagtagtattaattagagttataattggaaaaaagtaattaat 36232917  T
Q  265 gttgtatcaaaaactgaaatggatcaagattcctgagagaata 307  Q
    ||| |||  ||||||||||| | |||| |||||| ||| ||||    
T  36232918 gttttattgaaaactgaaataggtcaatattccttagacaata 36232960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 69 - 299
Target Start/End: Complemental strand, 14352744 - 14352511
Alignment:
Q  69 aatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnn---tgattttgagtgtttttgttaagtattg 165  Q
    ||||||| ||||  |||||||||||||||  |||||||||||||||||||||||||| ||||          || |||||||||| ||||| ||||||||    
T  14352744 aatttaactgagctagttgagcttttcacatagattaagaaaagtgtataaatgaaatagagagaaaaaaaatggttttgagtgtctttgtcaagtattg 14352645  T
Q  166 gtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatg 265  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||| | ||| ||||||||| ||||||||  ||||||||||         |||||||||    
T  14352644 gtgcattcttctttatcgtaaatataaagtagaatatattgaattgggagtggtgaaagtaatattaattacagttataattgagaaaaaataattaatg 14352545  T
Q  266 ttgtatcaaaaactgaaatggatcaagattcctg 299  Q
    ||||||  ||||||||||||| |||| |||||||    
T  14352544 ttgtatagaaaactgaaatgggtcaaaattcctg 14352511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 2219404 - 2219557
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| | ||||||| ||| ||||||||||||||||||       ||||||||||||| ||| | ||  |||| |||||||||||||||||||||||||    
T  2219404 tttcacactgattaagtaaattgtataaatgaaagagagagaataatgattttgagtgtctttataaaagattgatgcattcttctttatcataaatgta 2219503  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  2219504 aagtaaaatatattgaattggaagttgtgaacgtagtattaattagagttataa 2219557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 27209896 - 27210078
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtatt 164  Q
    ||||||||||| | ||  |||||| | ||| || || |||||||||||||||||||||||||||||       ||||||||||||| ||||  |||||||    
T  27209896 tcccaatttaactaagatagttgaccattttacacatattaagaaaagtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtatt 27209995  T
Q  165 ggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||||||||| | |||||||||||||   ||| ||||||  |||||||||| |||||||||||    
T  27209996 ggtgcattcttctttatcataaatgtaaaggagaatatattgaattgagagtggtgaaaagagtattaattagagttataatt 27210078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 11425874 - 11425980
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||  |||    
T  11425874 ttttgagtgtctttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtagtgaaagtagtattaattaaagt 11425973  T
Q  241 tataatt 247  Q
    |||||||    
T  11425974 tataatt 11425980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 29225410 - 29225518
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| |||||    
T  29225410 tgattttgagtgcctttgttaagtattggtgcattcttttttatcataaatggaaagtagaatatattgaattggaagtggtgaaagtagtatt-atttg 29225508  T
Q  238 agttataatt 247  Q
    ||||||||||    
T  29225509 agttataatt 29225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 4466170 - 4466265
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||| |||||||||||    
T  4466170 tttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtagtattaattagagttataatt 4466265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 37280927 - 37281087
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||| ||||| ||||| | |||| | ||| || ||||||||||||| ||| ||||||||||||||       ||||||||||||| ||||| ||||    
T  37280927 ccgtcccagtttaactgagtcacttgaccatttgacacagattaagaaaaatgtgtaaatgaaagagagaaa----tgattttgagtgtctttgtcaagt 37281022  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagta 226  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| |||||||||    
T  37281023 attggtgcattcttttttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagta 37281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 52382388 - 52382546
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||| |||||||| |    
T  52382388 tgattttgagtgtcttagtcaagtattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaattag 52382487  T
Q  238 agttataatt-nnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    ||||||||||         ||||||||||||||||  |||| |||||||| ||||||||    
T  52382488 agttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatgggtcaagatt 52382546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 51049659 - 51049507
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    ||||||| |||||||||||||||||||||| ||||||||       || |||||| ||| ||| | |||| || |||||||||| |||||||||||||||    
T  51049659 tttcactaagattaagaaaagtgtataaataaaagagagagaaaaatggttttgaatgtctttatcaagt-ttagtgcattcttttttatcataaatgta 51049561  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||| | ||||||    
T  51049560 aagtataatatattgaattgggagttgtgaaagtagtattaatttaaattataa 51049507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 12267636 - 12267742
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||  ||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| | ||||    
T  12267636 ttttgagtgcatttttcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaactagagt 12267735  T
Q  241 tataatt 247  Q
    |||||||    
T  12267736 tataatt 12267742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 16040180 - 16040074
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||| ||||| || ||||    
T  16040180 ttttaagtgtctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatattatttagagt 16040081  T
Q  241 tataatt 247  Q
    |||||||    
T  16040080 tataatt 16040074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 37495969 - 37495844
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||||||||||||||||| ||||       ||||||||| ||| ||| | |||||||||||||||||||||||| |||||||||||||| ||||    
T  37495969 attaagaaaagtgtataaatgaaaaagagagaaa--tgattttgaatgtctttatcaagtattggtgcattcttctttattataaatgtaaagtagaata 37495872  T
Q  202 tattgaatttgaagttgtgaaagtagta 229  Q
    ||||||||| | ||| ||||||||||||    
T  37495871 tattgaattgggagtagtgaaagtagta 37495844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 29756167 - 29756253
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||| | |||||||||    
T  29756167 tattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 29756253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 20986505 - 20986629
Alignment:
Q  53 ttacccccgccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgttt 152  Q
    |||| ||| |||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |        ||  ||||||||| |    
T  20986505 ttactccctccgtcccaatttaactgagttagttgagtttttcacacagattaagaaaagtgtataaatgaaagaaa------aatggctttgagtgtct 20986598  T
Q  153 ttgttaagtattggtgcattcttctttatca 183  Q
    |||| ||||||||||||||||||||||||||    
T  20986599 ttgtcaagtattggtgcattcttctttatca 20986629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 37541085 - 37541207
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||||||||||| ||||||||||       || |||||| ||| ||| | || ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  37541085 aaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaatgtaaagtagaatatattga 37541184  T
Q  208 atttgaagttgtgaaagtagtat 230  Q
    ||| ||||| |||||||||||||    
T  37541185 attggaagtggtgaaagtagtat 37541207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 47293601 - 47293697
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| || ||||||||||| |||  || ||||| ||||||||||||    
T  47293601 tgattttgagtgtttttgtcaagtattggtgcattcttctttatcataaatataaattagaatatattgaa-ttggcgtggtgaatgtagtattaatt 47293697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 18186217 - 18186317
Alignment:
Q  147 gtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataat 246  Q
    |||| ||||||||||||||  |||||||| |||||||||||| ||| |||||||||| |||||| | ||| |||||||||||||||||| ||||||||||    
T  18186217 gtgtctttgttaagtattgacgcattcttttttatcataaatataatgtaaaatatactgaattgggagtggtgaaagtagtattaattagagttataat 18186316  T
Q  247 t 247  Q
    |    
T  18186317 t 18186317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 190
Target Start/End: Original strand, 36326134 - 36326259
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtatt 164  Q
    ||||| ||||| ||||  |||||| | |||||| ||||||||||||||||||||||||||||||||       || |||||||||| ||||| || ||||    
T  36326134 tcccagtttaactgagccagttgaacatttcacacagattaagaaaagtgtataaatgaaagagagagaacaatggttttgagtgtctttgtcaaatatt 36326233  T
Q  165 ggtgcattcttctttatcataaatgt 190  Q
    ||||||||||| ||||||||||||||    
T  36326234 ggtgcattcttgtttatcataaatgt 36326259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 705351 - 705457
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||| ||| ||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||   ||| || |||||| |||||||| |    
T  705351 tgattttgaatgtctttattaagtattagtgcattcttctttatcatagatgtaaagtataatatattgaattgagagtggtaaaagtaatattaattag 705450  T
Q  238 agttata 244  Q
    |||||||    
T  705451 agttata 705457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 21304742 - 21304880
Alignment:
Q  71 tttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgca 170  Q
    ||||| ||||| |||||| | ||||||  | |||||||||| ||||||||||||||||||       || |||||||||| ||||| |||||||| ||||    
T  21304742 tttaactgagtcagttgatcatttcacataaattaagaaaaatgtataaatgaaagagagataaaattg-ttttgagtgtctttgtcaagtattgatgca 21304840  T
Q  171 ttcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    || ||||||||||||||| ||||||| |||||||||||||    
T  21304841 tttttctttatcataaatataaagtataatatattgaatt 21304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 24131429 - 24131511
Alignment:
Q  165 ggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||| | |||||||||    
T  24131429 ggtgcattcttctttatcataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 24131511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 52432466 - 52432311
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || ||||||| || ||||||||||||  ||||       ||||||| |||| | ||||||||||||| |||||||||   || ||||||||    
T  52432466 cttttcacacacattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgctcttgttaagtattgatgcattctttactaccataaatg 52432367  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||| ||||||||||||||  ||||||||||||||  ||||||| |||||||||    
T  52432366 taaagtgaaatatattgaattgtaagttgtgaaagtaacattaattagagttataa 52432311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 17342931 - 17342826
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||  ||||| ||||||||||||||   |||  | ||||||||||||||| ||||    
T  17342931 ttttaagtgtttttgttaagtattggtgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagtagtattaattagagt 17342832  T
Q  241 tataat 246  Q
    ||||||    
T  17342831 tataat 17342826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 2886254 - 2886168
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||   ||| |||||||||||||||||| | |||||||||    
T  2886254 tattggagcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataatt 2886168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 29225844 - 29225750
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||| |  |||||||||||| |||||| ||||||||||||| | |||  ||||||||||||||||| |||||||||||    
T  29225844 ttgtcaagtattggtgcattcattcttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataatt 29225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 46363436 - 46363510
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||   ||| ||| ||||||||||||||    
T  46363436 tattggtgcattcttctttatcataaatgcaaagtaaaatatattgaattgagagtggtggaagtagtattaatt 46363510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 50334009 - 50333883
Alignment:
Q  170 attcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgt 269  Q
    ||||||||||||||||||||||||||| | |||||||||||   ||| ||||||||| |||||||| |||||||||||        |||||||||||| |    
T  50334009 attcttctttatcataaatgtaaagtagagtatattgaattgagagtggtgaaagtattattaattagagttataattaaaaaaaagtaattaatgttat 50333910  T
Q  270 atcaaaaactgaaatggatcaagattc 296  Q
    ||   ||| ||||||||||||||||||    
T  50333909 attggaaagtgaaatggatcaagattc 50333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 51749149 - 51749292
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||| || |||||||||||| |||||       ||||||| |||||| |||||||||||||||  ||||| | |||||||||||| |||||  ||||    
T  51749149 attaagataaatgtataaatgaaggagagagaaaactgattttaagtgttcttgttaagtattggtttattctccattatcataaatgcaaagtggaata 51749248  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| | |||  |||||||| |||||||| |||||||||    
T  51749249 tattgaattgggagtgatgaaagtaatattaattagagttataa 51749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 5115827 - 5115936
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||  || |||||||||||||   ||  ||||||||| |||||||| |    
T  5115827 tgattttgagtgtctttgacaagtattgatgcattcttctttatcataaatgtaatatagaatatattgaattgagagaggtgaaagtaatattaattag 5115926  T
Q  238 agttataatt 247  Q
    || |||||||    
T  5115927 agctataatt 5115936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 13500731 - 13500840
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| |||||||| |||||||||||||||||  ||||||||||| |||||  || |||||||||| | |||  ||||||||||||||||| |    
T  13500731 tgattttaagtgcttttgttatgtattggtgcattcttcactatcataaatgcaaagtggaaaatattgaattgggagtgctgaaagtagtattaattag 13500830  T
Q  238 agttataatt 247  Q
    | ||||||||    
T  13500831 aattataatt 13500840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 40754438 - 40754511
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaat 234  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||   |||||||||||||||||||||    
T  40754438 tattggtgcattcttctttatcataaatgcaaagtagaatatattaaattgagagttgtgaaagtagtattaat 40754511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 50086084 - 50086011
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagtta 242  Q
    |||||||||||||||||||||||||||| |||||||||||||||  || |||||| ||||||||||| ||||||    
T  50086084 cattcttctttatcataaatgtaaagtagaatatattgaatttggtgtggtgaaaatagtattaattagagtta 50086011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 5359206 - 5359274
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagag 130  Q
    |||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  5359206 ccgtcccagtttaactgagttagttgagcttttcacacagattaagaaaagtgtataaataaaagagag 5359274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 5442431 - 5442339
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||| ||||||||| |  ||||||||||| |||||  ||||||||||||| ||||||||||||||| ||||||||  ||||||||    
T  5442431 ttgttaagtattagtgcattctccactatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattatagttataa 5442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 28277055 - 28277147
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||  || |  ||||||| ||||||||| |||||||||    
T  28277055 ttgttaagtattggtgcattctccagtatcataaatgtaaagtgaaatatattgaattgaaaatgatgaaagtggtattaattagagttataa 28277147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 32587917 - 32587764
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||||||| | |||       | ||||| |||||||||||||||||||| |||||| | | |||||||||||| |    
T  32587917 tttcacacatattaagaaaaatgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataaatgca 32587818  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||| ||||||||||||||   |||  ||||| || |||||||| |||||||||    
T  32587817 aagtgaaatatattgaattgagagtgatgaaattattattaattagagttataa 32587764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 36467212 - 36467304
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| ||||| |  ||| ||||||||||||| |||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  36467212 ttgttaagtattggtggattctccactatgataaatgtaaagtgaaatatattgaattggaaatgatgaaaatagtattaatttgagttataa 36467304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 36784405 - 36784313
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||| ||||||| | |  ||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||  ||||||||    
T  36784405 ttgttaagtatttgtgcattttccactatcataaatgcaaagtgaaatatattgaatttgaagttgtgaaaataatattaattatagttataa 36784313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 50267455 - 50267547
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| | | |  |||||||| |||||||| || ||||||    
T  50267455 ttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatatattgaattgggaatgatgaaagtaatattaattagaattataa 50267547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 26583864 - 26583725
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||||||||||| ||||||||||       ||| ||||||||  ||| | || ||||||||||||||||||||||||||||| ||| || ||||||||||    
T  26583864 aaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttctttatcataaatgcaaaatagaatatattga 26583765  T
Q  208 atttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||| | |||  ||||| || |||||||| | |||||||||    
T  26583764 attgggagtgatgaaaatattattaattagtgttataatt 26583725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 31798501 - 31798415
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||||||   ||| ||||||||| |||||||| | |||||||||    
T  31798501 tattggtgcattattctttatcataaatgcaaagtagaatatattgaattgagagtagtgaaagtaatattaattagtgttataatt 31798415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 37925271 - 37925357
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||||||   ||| ||||||||| |||||||| | |||||||||    
T  37925271 tattggtgcatttttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataatt 37925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 27932839 - 27932932
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||   ||| ||||| || |||||||||    
T  27932839 tttgagtgtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaggttgtattaatt 27932932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 247
Target Start/End: Original strand, 28706549 - 28706735
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    ||||| || ||||| ||||  |||||| | |||||| || ||||| |||| ||||||||||||  ||||       || |||||||||  ||||| ||||    
T  28706549 ccgtctcagtttaactgagccagttgaccatttcacacatattaaaaaaaatgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagt 28706648  T
Q  162 attggtgcattcttctttatcataaatgt-aaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||| ||||||||||||||||| ||| || ||||||||||||| | |||  |||||||  |||||||| |||||||||||    
T  28706649 attgatgcatttttctttatcataaatgtaaaaatagaatatattgaattagcagtgatgaaagttatattaattagagttataatt 28706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 33149375 - 33149282
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||  || |||| |||||||| |||||||||||||||||||| |||||| |||||||||||||   |||  |||||||||||||||||    
T  33149375 tttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaatt 33149282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 16451687 - 16451579
Alignment:
Q  188 tgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatgga 287  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||  ||||||||||        ||||||||||||||||  |||| ||||||||     
T  16451687 tgtaaagttaaatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatggg 16451588  T
Q  288 tcaagattc 296  Q
    |||||||||    
T  16451587 tcaagattc 16451579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 16460840 - 16460732
Alignment:
Q  188 tgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatgga 287  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||  ||||||||||        ||||||||||||||||  |||| ||||||||     
T  16460840 tgtaaagttaaatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatggg 16460741  T
Q  288 tcaagattc 296  Q
    |||||||||    
T  16460740 tcaagattc 16460732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 26040736 - 26040638
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaag---taaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||   || |||||||||| || ||||| ||| ||| |||||||||| |||||||||||    
T  26040736 tttgtcaagttttgatgcattcttctttatcataaatgtaaagtactagaatatattgacttggaagtggtggaagcagtattaattagagttataatt 26040638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 46496121 - 46496017
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    ||||||||||| |||||||| |||| || ||||| | |||||||||||| |||||  ||||||||||||| |  ||  ||||||||||||||||| ||||    
T  46496121 ttttgagtgttcttgttaaggattgatgtattctccattatcataaatgcaaagtggaatatattgaattaggcgtgatgaaagtagtattaattagagt 46496022  T
Q  241 tataa 245  Q
    |||||    
T  46496021 tataa 46496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 31634300 - 31634359
Alignment:
Q  143 ttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  31634300 ttgagtgtctttgttaagtattgatgcattcctctttatcataaatgtaaagtagaatat 31634359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 42926276 - 42926168
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| |||||||||||| || ||       ||||||| |||||||||||||||||| |||||||||| |  ||||||||||| ||| | |||||    
T  42926276 attaagaaaaatgtataaatgaatgaaagagaaaaatgattttaagtgtttttgttaagtatcggtgcattctccactatcataaatgcaaaatgaaata 42926177  T
Q  202 tattgaatt 210  Q
    |||||||||    
T  42926176 tattgaatt 42926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 50926839 - 50926788
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatata 203  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  50926839 tttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatata 50926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 46273264 - 46273194
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| |||| ||||    
T  46273264 attttgaatgtttttgtcaagtattgatgcattcttctttatcttaaatgtaaagtagaatgtattaaatt 46273194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 26924145 - 26924194
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  26924145 tattggtgcattcttctttatcataaatgcaaagtataatatattgaatt 26924194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 19532936 - 19533028
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| |||||||||||| |  || |  |||||||||||||||||  ||||||||    
T  19532936 ttgttaagtattggttcattctccactatcataaatgtaaagtgaaatatattgaactgtaaatgatgaaagtagtattaattaaagttataa 19533028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 26040811 - 26040734
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttcttt 179  Q
    |||||||||||||||||||||||||||         || |||||||||||||||| ||||||||||||||||||||||    
T  26040811 attaagaaaagtgtataaatgaaagagttagaaaaatggttttgagtgtttttgtcaagtattggtgcattcttcttt 26040734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 26756067 - 26755975
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| |||||||| |  |||||||||| ||||||  |||||||||||||  || |  ||||||||||||||||| |||||||||    
T  26756067 ttgttaagtattgatgcattctccactatcataaatataaagtgtaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 26755975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 52382272 - 52382340
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagag 130  Q
    |||||||| ||||| ||||| |||||| ||||||||  |||||||||||| ||||||||||||||||||    
T  52382272 ccgtcccattttaactgagttagttgaacttttcacatagattaagaaaaatgtataaatgaaagagag 52382340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 2571454 - 2571363
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||||||||||||||||| ||  ||||| |||||| |||||| |||||||||||||   |||  ||||||||||||||| | ||||||||    
T  2571454 ttgttaagtattggtgcattatttcttatcctaaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaactagagttata 2571363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 3718866 - 3718957
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||| ||||||| |||||||  || ||||||||||||||||||| |||||||||||||   |||  |||| |||||||||||| ||||||||    
T  3718866 ttgtcaagtatttgtgcatttatcattatcataaatgtaaagtataatatattgaattgagagtgatgaaggtagtattaattagagttata 3718957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 7075441 - 7075514
Alignment:
Q  177 tttatcataaatgtaaagtaaaatata---ttgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||| |||| ||||||   ||||||| | |||||||||||||||||||||| |||||||||||    
T  7075441 tttatcataaatgtagagtagaatatagttttgaattcggagttgtgaaagtagtattaattagagttataatt 7075514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 16956645 - 16956582
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatatt 205  Q
    ||||||||| ||| ||||||||| |||||||||| |||||||||||| ||||||| ||||||||    
T  16956645 tttgagtgtctttattaagtatttgtgcattcttatttatcataaatataaagtagaatatatt 16956582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 34814020 - 34813951
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||| |||||| |||||||||||| |||||||  || |||||||||||| |||||| |||||||||||||    
T  34814020 ttttaagtgttcttgttaagtattagtgcatttatcattatcataaatgcaaagtagaatatattgaatt 34813951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 48391845 - 48391756
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||  |||| ||||||||||| | |||| ||||||||||| ||||||||||||||   |||  |||||||| ||||||||    
T  48391845 agtgtttttgttatatatttgtgcattcttcatcatcacaaatgtaaagtgaaatatattgaattatgagtgatgaaagtaatattaatt 48391756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 5563104 - 5563025
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaa 233  Q
    |||||||||||| ||||||||| | ||||||||||||||||||  || |||||||||| ||| |  |||||||||||||||    
T  5563104 ttgttaagtatttgtgcattct-cattatcataaatgtaaagtggaacatattgaattggaaatgatgaaagtagtattaa 5563025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 7785295 - 7785383
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| |||||||| |  ||||||||||||||||| ||||||||||||||   ||   | ||||||||||||||| |||||||||    
T  7785295 taagtattgatgcattctccactatcataaatgtaaagtgaaatatattgaattgagagcgataaaagtagtattaattagagttataa 7785383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 8773333 - 8773241
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  | ||||| ||| |||||  |||||||| || | |||||  ||||||||||||||||| |||||||||    
T  8773333 ttgttaagtattggtgcattctccactgtcatatatgcaaagtggaatatattaaactagaagtgatgaaagtagtattaattagagttataa 8773241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 27142956 - 27142996
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaat 209  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  27142956 cattcttctttatgataaatgtaaagtaaaatatattgaat 27142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 28839430 - 28839338
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||| |  ||||||||||| |||||  ||||||||||||| | |||  |||||||||||||||||  ||||||||    
T  28839430 ttgttaagtattggtctattctccactatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 28839338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 35622826 - 35622890
Alignment:
Q  183 ataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| |||||| ||||||||||||| | | || ||||||||||||||||| |||||||||||    
T  35622826 ataaatgcaaagtagaatatattgaattggcaattatgaaagtagtattaattagagttataatt 35622890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 20988533 - 20988632
Alignment:
Q  187 atgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatgg 286  Q
    |||||||||| ||||||||||||| | ||| |||||| || |||||||| |||||||||||        ||||||||||||||||  |||| ||||||||    
T  20988533 atgtaaagtagaatatattgaattgggagtggtgaaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatgg 20988632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 27831937 - 27831850
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||||  | |||||||||||| |||||  || |||||||||| | |||  ||||||||||||||||| ||||    
T  27831937 ttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaagatattgaattgggagtgatgaaagtagtattaattagagt 27831850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 39420722 - 39420581
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttcttt---atcataaatgtaaagtaaaatatat 204  Q
    |||||||||||||||||||||||       | ||||||||||| || || ||||||||||||||| || |||   || ||||||| ||||||||| || |    
T  39420722 aaaagtgtataaatgaaagagagagaaaaataattttgagtgtctt-gtcaagtattggtgcattgtttttttttattataaatgcaaagtaaaacatgt 39420624  T
Q  205 tgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||   | || ||||||||||||||||| || ||||||||    
T  39420623 tgaattgagaattatgaaagtagtattaattagatttataatt 39420581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 47792118 - 47792185
Alignment:
Q  63 cgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagag 130  Q
    |||| |||||||| ||||| | || | |||||||| ||||||||||||||||||||||| ||||||||    
T  47792118 cgtctcaatttaactgagttaatttaacttttcacacagattaagaaaagtgtataaatcaaagagag 47792185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 52146699 - 52146766
Alignment:
Q  180 atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||| |||||| ||||| | |||||   |||||||||||||||||||||| |||||||||||    
T  52146699 atcataaatgcaaagtagaatatgtcgaattgagagttgtgaaagtagtattaattagagttataatt 52146766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 52830380 - 52830488
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||| |||| |||||||||||| |||||       | ||||||||||  ||||||||||||||||||||| | |  |||||||||||||||||  ||||    
T  52830380 attaaaaaaaatgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataaatgtaaagtggaata 52830479  T
Q  202 tattgaatt 210  Q
    |||| ||||    
T  52830480 tattcaatt 52830488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 10587614 - 10587692
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| |||||||||||| ||| || |||||||||||||   |||  ||||||||||||||||| | |||||||||    
T  10587614 cattcttcattatcataaatgcaaaatagaatatattgaattgagagtgatgaaagtagtattaattagtgttataatt 10587692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 19349012 - 19349105
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| ||||||||||||||||    |||||||||||| ||| || |||||||||||||   |||| ||||||||||||||||| | |||||||||    
T  19349012 ttgtcaagtattggtgcattc-caattatcataaatgcaaaatagaatatattgaattgagagttttgaaagtagtattaattagggttataatt 19349105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 30903244 - 30903338
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||||||| | | |||||||||||| |||||| |||||||||||   | |||  ||||| || |||||||| |||||||||||    
T  30903244 ttgttaagtatttgtgcattttccattatcataaatgcaaagtagaatatattgaaacaggagtgatgaaaataatattaattagagttataatt 30903338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 44580599 - 44580513
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| ||||||| || ||||||||||||| |||||| |||||||| |||| | ||| ||||| ||| |||||||| | |||||||||    
T  44580599 tatttgtgcatttttttttatcataaatgcaaagtagaatatattaaattaggagtggtgaatgtaatattaattagtgttataatt 44580513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 45305956 - 45305887
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||| || || |||||||  |||||||||| |||||||||||| |||||| |||||||||||||    
T  45305956 attttgagtgtctt-gtcaagtatttatgcattcttcattatcataaatgcaaagtagaatatattgaatt 45305887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 49494129 - 49494272
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| ||||||||||||||||||       |  |||| ||||   ||||||| |||||||  ||||| |  |||||||||||||||||  ||||    
T  49494129 attaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcacttgttaaatattggtcaattctccactatcataaatgtaaagtggaata 49494228  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| ||| |  |||||||| ||||||||  ||||||||    
T  49494229 tattgaattagaaatgatgaaagtaatattaattaaagttataa 49494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 49945084 - 49944981
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| ||||||||||||  ||||       || |||| |||| | |||||||||||| |||||||||||| ||||||||||| |    
T  49945084 tttcacacatattaagaaaaatgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatcataaatgca 49944985  T
Q  192 aagt 195  Q
    ||||    
T  49944984 aagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 5503503 - 5503454
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||||||||| |||  |||||| |||||||||||||    
T  5503503 tattggtgcattcttctttatcattaattcaaagtataatatattgaatt 5503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 8327821 - 8327716
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||| |||| | |||||||||||||||  ||||| |  ||||||||||| ||| |  |||||||||||||   |||  ||||||||||||||||| |||    
T  8327821 attttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaaatggaatatattgaattgagagtgatgaaagtagtattaattagag 8327722  T
Q  240 ttataa 245  Q
    ||||||    
T  8327721 ttataa 8327716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 25983648 - 25983737
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||| | ||||||||||||| ||| || ||||| ||||||||  |||  ||||| || ||||||||  ||||||||    
T  25983648 ttaagtattggtgcattcatttttatcataaatgcaaaatagaatatgttgaatttagagtgatgaaattaatattaattaaagttataa 25983737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 38664497 - 38664400
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||||||||    ||||||||||| ||| |  ||||||||||||| | | |  ||||||||||||||||| |||||||||    
T  38664497 tgtttttgttaagtaccggtgcattctctactatcataaatgcaaaattgaatatattgaattaggaatgatgaaagtagtattaattagagttataa 38664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 45889265 - 45889357
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt-tgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| |||||||  ||||| | |||||||||||| |||||  ||||||||||||| |||| |  ||||||||||||||||| |||||||||    
T  45889265 ttgttaactattggtctattctccattatcataaatgcaaagtggaatatattgaattatgaa-tgatgaaagtagtattaattagagttataa 45889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 9590693 - 9590553
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaag--agagnnnnnnntgattttgagtgtttttgttaagta 162  Q
    |||||||| || | ||| |||||| | ||||||  |||||||||||| ||||||||||||||  ||||       || |||| ||||  ||||| |||||    
T  9590693 tcccaattcaactaagtcagttgaccatttcacatagattaagaaaattgtataaatgaaagagagagataataatggttttaagtgcctttgtcaagta 9590594  T
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatata 203  Q
    || ||||||| || |||||||||||| ||||||| ||||||    
T  9590593 tttgtgcattattatttatcataaatataaagtagaatata 9590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 17724731 - 17724823
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| ||||| |||||||| |  || |||||||| |||||| ||| ||||||||| | |||  ||||| ||||||||||| |||||||||    
T  17724731 ttgttaattattgatgcattctccactaccataaatgcaaagtagaatttattgaattgggagtgatgaaaatagtattaattagagttataa 17724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 26606147 - 26606211
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||  | |||  ||||||||||| |||||||||||| ||| ||||||||||||||||    
T  26606147 agtgtttttgtctaatataagtgcattcttcattatcataaatgcaaattaaaatatattgaatt 26606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 43895944 - 43895881
Alignment:
Q  147 gtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||  |||| |  ||||||||||| |||||  |||||||||||||    
T  43895944 gtgtttttgttaagtattggtgtgttctccactatcataaatgcaaagttgaatatattgaatt 43895881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 46968174 - 46968088
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||| |||||||||||| ||| |||  || ||||||||||| ||||||||||||| |||||| || |||  |||||||||| ||||||    
T  46968174 tgttattgttaagtattagtgtatttatcattatcataaatataaagtaaaatatgttgaatgtg-agtgatgaaagtagtgttaatt 46968088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 5040592 - 5040674
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||| |||||||| |  |||||||||||  |||| |||||||||||||| | |||  ||||| ||||| |||||    
T  5040592 ttgttaagtattgatgcattctccactatcataaatgcgaagtgaaatatattgaattaggagtgatgaaaatagtaataatt 5040674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 29678928 - 29678860
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||| ||||||||||| ||||||| |  ||||| |||||| |||||  |||||||||||||    
T  29678928 ttttgagtgtttt-gttaagtattgatgcattcattattatcgtaaatgcaaagttgaatatattgaatt 29678860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 40061895 - 40061806
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| | |||| ||| |||||||||||| ||| || |||||||||||||   |||  |||||||| |||||||| || ||||||||    
T  40061895 aagtattgttacatttttcattatcataaatgcaaattagaatatattgaattgagagtgatgaaagtaatattaattagaattataatt 40061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 46880567 - 46880449
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||||||| |||||       |||||||||| | | || |||||||| ||||  |||| |  |||||||||||||    
T  46880567 tttcacacatattaagaaaattgtataaatgaaggagagagaaaaatgattttgagagctcttattaagtatcggtgtcttctccactatcataaatgta 46880468  T
Q  192 aagtaaaatatattgaatt 210  Q
    ||||  |||||||| ||||    
T  46880467 aagttgaatatattaaatt 46880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 52146396 - 52146449
Alignment:
Q  180 atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaa 233  Q
    |||||||||| |||||||||||| | |||||   ||||||||||||||||||||    
T  52146396 atcataaatgcaaagtaaaatatgtcgaattgagagttgtgaaagtagtattaa 52146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 62 - 298
Target Start/End: Complemental strand, 48409768 - 48409530
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnn--tgattttgagtgtttttgttaa 159  Q
    |||||||||||||| ||||  ||||||||||||||| || |||||||||| ||||||||||||||||||         |  |||||||||| ||||| ||    
T  48409768 ccgtcccaatttaactgagctagttgagcttttcacacatattaagaaaaatgtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaa 48409669  T
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaa 259  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | ||| |||||||||||||||||| |||||||||||        ||||    
T  48409668 gtattggtggattcttctttatcataaatgtaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagagttataattggaaaaaagtaa 48409569  T
Q  260 ttaatgttgtatcaaaaactgaaatggatcaagattcct 298  Q
    ||||||||||||  ||||||||||||| |||||||||||    
T  48409568 ttaatgttgtattgaaaactgaaatgggtcaagattcct 48409530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 63 - 247
Target Start/End: Original strand, 53753990 - 53754174
Alignment:
Q  63 cgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagta 162  Q
    ||||||||||||| ||||  |||| | |||||||  | |||||| |||||||||||||||||| ||||       ||||||||||||| |||| ||||||    
T  53753990 cgtcccaatttaactgagctagtttaacttttcatacggattaaaaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagta 53754089  T
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||   | | || ||||||||||||||| |||||||||||    
T  53754090 ttggtgcattcttctttatcataaatgtaaagtagaatatattgaattaagaatagtaaaagtagtattaattagagttataatt 53754174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 51165104 - 51164950
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||||||||||||| ||||||||       | ||||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  51165104 tttcacacaaattaagaaaagtgtataaataaaagagagagaaaaataattttgagtgtctttatcaagtattggtgcattcttctttatcataaatgta 51165005  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagta-ttaatttgagttataa 245  Q
    ||||| ||||||||||||||| ||| |||||||||||| |||||| |||||||||    
T  51165004 aagtagaatatattgaatttggagtagtgaaagtagtacttaattagagttataa 51164950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 1334736 - 1334889
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| |||||||||||||| |||||||||||||||||       | ||||||| ||  ||| | ||||||||||||||||||||||||||||||||||    
T  1334736 tttcacacagattaagaaaagcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataaatgta 1334835  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| ||||||||||||| | ||| |||||||||||||||||| |||||||||    
T  1334836 aagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataa 1334889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 92 - 295
Target Start/End: Complemental strand, 53051178 - 53050975
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||||||||||||  ||||||||       |  |||||||||  ||| | ||||||| |||||||||| |||||||||||||||    
T  53051178 tttcacacagattaagaaaagtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtatttgtgcattcttgtttatcataaatgta 53051079  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||        ||||||||| ||| ||  |||| |||||||||||||    
T  53051078 aagtataatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatattgcattgaaaagtgaaatggatcaa 53050979  T
Q  292 gatt 295  Q
    ||||    
T  53050978 gatt 53050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 54021413 - 54021566
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| |||||| |||||||||||||||| ||||||||       ||||||||||||| ||| | || ||||| ||||||||||||||| |||||||||    
T  54021413 tttcacacagattgagaaaagtgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgta 54021512  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| ||||||||||||| | ||| |||||||||||||||||| || ||||||    
T  54021513 aagtagaatatattgaattcggagtggtgaaagtagtattaattagaattataa 54021566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 29858869 - 29858975
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||   ||| |||||||||||||||||| || |    
T  29858869 ttttgagtgtttttgtcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattatgagtggtgaaagtagtattaattagaat 29858968  T
Q  241 tataatt 247  Q
    |||||||    
T  29858969 tataatt 29858975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 21585411 - 21585520
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| || ||||||||| ||| ||||| ||||||||| |||||||| |    
T  21585411 tgattttgagtgtctttgttaattattggttcattcttctttatcataaatgtaaaatagaatatattgtattggaagtggtgaaagtaatattaattag 21585510  T
Q  238 agttataatt 247  Q
    ||||||||||    
T  21585511 agttataatt 21585520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 245
Target Start/End: Original strand, 38600768 - 38600914
Alignment:
Q  99 cagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaa 198  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||   ||| | ||||||||||||||||||||||| ||||||||||||||| |    
T  38600768 cagattaagaaaagtgtataaatgaaaaagagagaaaaatgattttgagtccctttatcaagtattggtgcattcttctttaccataaatgtaaagtata 38600867  T
Q  199 atatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||| | | |||  ||||||||||||||||| |||||||||    
T  38600868 atatattgaactgggagtgatgaaagtagtattaattagagttataa 38600914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 21296456 - 21296611
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || | ||||| || |||||||||||| |||||       ||||||| | || | |||||||||||||||||||| |||  |||||||||||    
T  21296456 cttttcacacatactaagacaaatgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatg 21296555  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  21296556 caaagtagaatatattgaattggaagttgtgaaagtagtattaattagagttataa 21296611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 54122235 - 54122332
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||||||| |  ||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  54122235 tgtttttgttaagtattggtgcattctccactatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattgattagagttataa 54122332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 43639469 - 43639624
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || ||||||| || | |||||||||| |||||       || |||| |||| | ||||||||||||| |||||| | |  |||||||||||    
T  43639469 cttttcacacatattaagacaaatatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcattttccactatcataaatg 43639568  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     ||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  43639569 caaagtgaaatatattgaattggaagttgtgaaagtagtattaattagagttataa 43639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1923171 - 1923087
Alignment:
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||| | |||||||||    
T  1923171 ttggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 1923087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 41287354 - 41287259
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||   |||||||||| || |||||||| |||||||||||    
T  41287354 tttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaattaatattaattagagttataatt 41287259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 32977794 - 32977900
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||  ||| | |||||||| |||||| |||||||||||||||||||  || |||||||||||||   |||||||||||||||||||||| ||||    
T  32977794 ttttgagtgcatttttcaagtattgatgcatttttctttatcataaatgtaatttagaatatattgaattgagagttgtgaaagtagtattaattagagt 32977893  T
Q  241 tataatt 247  Q
    |||||||    
T  32977894 tataatt 32977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 32827320 - 32827412
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||| ||||||||||||||| |  ||||||||||||||||| |||||||||||||| ||| |  ||||||||||||||||| |||||||||    
T  32827320 ttgttacgtattggtgcattctccactatcataaatgtaaagtgaaatatattgaattagaaatgatgaaagtagtattaattagagttataa 32827412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 39329766 - 39329860
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||   |||  ||||||||||||||||| || ||||||||    
T  39329766 ttgttaagtattggtgcattctttcttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagaattataatt 39329860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 9218299 - 9218144
Alignment:
Q  90 cttttcactcagattaagaaaa-gtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    |||||||| || |||||||||| |||||||| ||||||||||       |  |||||||||| |  |||||||||||||||||||||  |||||||||||    
T  9218299 cttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtctc-gttaagtattggtgcattctttcttatcataaat 9218201  T
Q  189 gtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    | |||||| |||||| ||||||   |||  ||||||||||||||||| |||||||||    
T  9218200 gcaaagtagaatataatgaattgagagtgatgaaagtagtattaattagagttataa 9218144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 30261517 - 30261612
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaattt-gaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||| |  ||||||||||||||||||  |||||||||||||| | |||  ||||||||||||||||| |||||||||||    
T  30261517 ttgtcaagtattggtgcattccttcttatcataaatgtaaagtggaatatattgaatttgggagtgatgaaagtagtattaattagagttataatt 30261612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 42547122 - 42547216
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||  |||||||||||| |||  | ||||||||||||| | |||  ||||||||||||||||| ||| |||||||    
T  42547122 ttgttaagtattggtgcattctttcttatcataaatgcaaaagagaatatattgaattgggagtgatgaaagtagtattaattagagctataatt 42547216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 50736182 - 50736050
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngt 257  Q
    ||||||||||||||||||||||||     || | ||||| ||||||||||||| ||||| |||||||||||||||||| |||||||| ||        ||    
T  50736182 aagtattggtgcattcttctttat-----atatcaagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagt 50736088  T
Q  258 aattaatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    |||||||||| |||  ||||||||||||  ||||||||    
T  50736087 aattaatgttctattgaaaactgaaatgagtcaagatt 50736050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 50776673 - 50776805
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngt 257  Q
    ||||||||||||||||||||||||     || | ||||| ||||||||||||| ||||| |||||||||||||||||| |||||||| ||        ||    
T  50776673 aagtattggtgcattcttctttat-----atatcaagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagt 50776767  T
Q  258 aattaatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    |||||||||| |||  ||||||||||||  ||||||||    
T  50776768 aattaatgttctattgaaaactgaaatgagtcaagatt 50776805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 46194233 - 46194316
Alignment:
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||   ||| |||||||||||||||||| | |||||||||    
T  46194233 ttggtgcattct-ctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataatt 46194316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 54458310 - 54458382
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| |||| ||||||||||||| |||||||||| | ||||||||||||||||||  |||||||||||||    
T  54458310 tgattttaagtgattttgttaagtatgggtgcattctccattatcataaatgtaaagtggaatatattgaatt 54458382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 54493999 - 54493907
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||| | ||||| |  ||||||||||||||||| ||||||||| |||| ||| |  ||||||||||||||||| |||||||||    
T  54493999 ttgttaagtattggcgtattctccactatcataaatgtaaagtgaaatatattaaattggaaatgatgaaagtagtattaattagagttataa 54493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 54845520 - 54845624
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||| || | ||||||||    ||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||| ||||    
T  54845520 ttttaagtgtttttgttaaggatcgatgcattctctagtatcataaatgcaaagtggaatatattgaattagaagtaatgaaagtagtattaattagagt 54845619  T
Q  241 tataa 245  Q
    |||||    
T  54845620 tataa 54845624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 9017953 - 9017829
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||||| |||| ||||||||||||||||||       |  |||| |||| |||||||||||||||||||||||| |  ||| ||||||| |    
T  9017953 tttcacacatattaaaaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattataaatgca 9017854  T
Q  192 aagtaaaatatattgaatttgaagt 216  Q
    |||| |||||||||||||| |||||    
T  9017853 aagtgaaatatattgaattggaagt 9017829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 8498358 - 8498288
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||| ||||||||||||||||||| || ||| | |||||| | ||||||||||||||||||    
T  8498358 attttgagtgttttggttaagtattggtgcattcctccttaccttaaatgcagagtaaaatatattgaatt 8498288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 44219053 - 44219143
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||||||  | |||||||||||  |||||| ||||||||||||| |||||  ||||| ||||||||||| |||||||||||    
T  44219053 taagtgttggtgcattccccattatcataaatacaaagtagaatatattgaattggaagtaatgaaaatagtattaattagagttataatt 44219143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 47496242 - 47496137
Alignment:
Q  171 ttcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgta 270  Q
    ||||| |||||||||||||||||||  |||||||||||||   |||  ||||||||||||||||| |||||||||||        |||||||||||||||    
T  47496242 ttcttttttatcataaatgtaaagtctaatatattgaattaagagtgatgaaagtagtattaattagagttataatttgaaaaaagtaattaatgttgta 47496143  T
Q  271 tcaaaa 276  Q
    | ||||    
T  47496142 ttaaaa 47496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 37041915 - 37041983
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||| |||||| |||||||||||||| ||| |  ||||||||||||||||| |||||||||||    
T  37041915 tatcataaatataaagtgaaatatattgaattggaaatgatgaaagtagtattaattagagttataatt 37041983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39144742 - 39144686
Alignment:
Q  147 gtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatata 203  Q
    |||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  39144742 gtgtctttgttaagtattggtgcattctcctttatcatagatgtaaagtagaatata 39144686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 39866557 - 39866661
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||| |||||||||||||||||| ||||| |  ||||||||||| ||||| ||||| ||||||||   |||  ||||||| ||||||||| ||||    
T  39866557 ttttaagtgattttgttaagtattggtgtattctccactatcataaatgcaaagtgaaatacattgaattgtgagtgatgaaagtggtattaattagagt 39866656  T
Q  241 tataa 245  Q
    |||||    
T  39866657 tataa 39866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 53876401 - 53876509
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| |||||||||||| ||| |       ||||||| |||| ||||||||| |||| ||||||| | |  ||||||||||||||||| |||||    
T  53876401 attaagaaaaatgtataaatgaaggagtgaaaaaaatgattttaagtgcttttgttaaatatttgtgcattttccactatcataaatgtaaagtgaaata 53876500  T
Q  202 tattgaatt 210  Q
    |||||||||    
T  53876501 tattgaatt 53876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 32023115 - 32023209
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||||| |  ||| ||||||| |||||  |||||||||||||   |||  |||||||| |||||||| |||||||||    
T  32023115 ttttgttaagtattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 32023209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 48744351 - 48744293
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||| |||||||| |  ||||||||||||||||| ||||||||||||||    
T  48744351 tttgttaagtattgatgcattctccactatcataaatgtaaagtgaaatatattgaatt 48744293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 52325280 - 52325174
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||||| |||||| ||||||||||||||| |  ||||||||||| |||||  |||||||||||||   | |   |||||||||||||||| ||||    
T  52325280 tttttagtgttattgttatgtattggtgcattctacgctatcataaatgcaaagtggaatatattgaattgagaatgacgaaagtagtattaattagagt 52325181  T
Q  241 tataatt 247  Q
    |||||||    
T  52325180 tataatt 52325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 36315735 - 36315784
Alignment:
Q  139 gattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  36315735 gatttcgagtgtctttgttaagtattggtacattcttctttatcataaat 36315784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 41031666 - 41031571
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatc---ataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||| | |  ||||   ||||||||||||| |||||||||||||| ||| |  |||||||||||||||||  ||||||||    
T  41031666 ttgttaagtattggtgcattttccactatcataataaatgtaaagtgaaatatattgaattggaaatgatgaaagtagtattaattaaagttataa 41031571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 45392182 - 45392089
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||| |||||||||||| |    |||| |||||||||||| |||||||||||||| ||| |  |||||||| |||||||| |||||||||    
T  45392182 tttgttaactattggtgcattatctactatcgtaaatgtaaagtgaaatatattgaattggaaatgatgaaagtaatattaattagagttataa 45392089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 26134719 - 26134811
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||| ||  ||||| |  ||||||||||| ||||| |||||||||||||| | |||  ||||||||||| ||||| |||||||||    
T  26134719 ttgttaagtattagtctattctccactatcataaatgcaaagtgaaatatattgaattgggagtgatgaaagtagtactaattagagttataa 26134811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 33994748 - 33994656
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  |||||||||||||||||  ||||||||||| |   | |  ||||||| ||||||||| |||||||||    
T  33994748 ttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatattgaactgagaatgatgaaagtggtattaattagagttataa 33994656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 44234196 - 44234089
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttg-tgaaagtagtattaattt 236  Q
    ||||||| | |||| || |||||||||||| | |||||| ||||| |||||| ||||| |||||||||||| ||||| ||| |||||||||| ||||||     
T  44234196 tgattttaaatgttcttattaagtattggtacgttcttcattatcgtaaatgcaaagtgaaatatattgaa-ttgaaattgatgaaagtagtcttaatta 44234098  T
Q  237 gagttataa 245  Q
    || ||||||    
T  44234097 gaattataa 44234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 11251092 - 11251200
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| |||||||||||| |||||       ||||||| |||| | |||||||||||||||||||||| |  ||||||||||| ||| | || ||    
T  11251092 attaagaaaaatgtataaatgaatgagagaaaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaattgaacta 11251191  T
Q  202 tattgaatt 210  Q
    |||| ||||    
T  11251192 tattaaatt 11251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 27668351 - 27668437
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| || ||| ||| |||||||||||| ||||| ||||||||||||||   |||  | ||||||||||||||| |||||||||||    
T  27668351 tattgatgtatttttcattatcataaatgcaaagtgaaatatattgaattaagagtgataaaagtagtattaattagagttataatt 27668437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 54783051 - 54782997
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||| | |  ||||||||||||||||| ||||||||||||||    
T  54783051 ttaagtattggtgcattatgcgctatcataaatgtaaagtgaaatatattgaatt 54782997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 5245503 - 5245411
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| ||||| |  ||||||||||  |||||  |||||||||||||   |||  ||||||| ||||||||| |||||||||    
T  5245503 ttgttaagtattggtgtattctccaatatcataaatacaaagtggaatatattgaattgagagtgatgaaagtggtattaattagagttataa 5245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 26832159 - 26832071
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||||||| |||||||| |   | |||||||| ||||| ||||||||| |||| | |||  ||||||||||||||||| ||||||||    
T  26832159 ttaagtattgatgcattctccaccaccataaatgcaaagtgaaatatattaaattggtagtgatgaaagtagtattaattagagttata 26832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 35300712 - 35300672
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaat 209  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  35300712 cattcatcgttatcataaatgtaaagtaaaatatattgaat 35300672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 3862176 - 3862282
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||||||||| || || ||| |||| |||||||  | |||||||||||| ||| ||||||||| ||||||   |||  |||||||| |||||||| |||    
T  3862176 attttgagtgtctt-gtcaaggattgatgcattccacattatcataaatgcaaattaaaatatactgaattgagagtgatgaaagtaatattaattagag 3862274  T
Q  240 ttataatt 247  Q
    ||||||||    
T  3862275 ttataatt 3862282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 36790845 - 36790880
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagta 196  Q
    |||||||| |||||||||||||||||||||||||||    
T  36790845 tattggtgtattcttctttatcataaatgtaaagta 36790880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 15280670 - 15280604
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||  ||||||||||||| | |||  ||||||||||||||||| | |||||||    
T  15280670 tatcataaatggaaagtggaatatattgaattgggagtgatgaaagtagtattaattagggttataa 15280604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 29361671 - 29361610
Alignment:
Q  182 cataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||||| |||||||||||||||||| |||||  ||||||| || |||||||| ||||||||    
T  29361671 cataaatgcaaagtaaaatatattgaa-ttgaatgtgtgaaaataatattaattagagttata 29361610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 50150411 - 50150477
Alignment:
Q  181 tcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||| ||||||||||| |||| | ||| |||||| || |||||||| || ||||||||    
T  50150411 tcataaatgtaaattaaaatatattaaattgggagtggtgaaaataatattaattagaattataatt 50150477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 55415450 - 55415512
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||||   ||||||||||  ||||| | | ||||||||||    
T  55415450 tgtttttgttaagtattggtgcattctttactatcataaatacaaagtgacacatattgaatt 55415512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 49122138 - 49122207
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||| ||| ||||||||||||| |||  ||  | ||||||||||||| |||||| |||||||||||||    
T  49122138 ttttgaatgtctttgttaagtattagtgtctttctatttatcataaatgcaaagtagaatatattgaatt 49122207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 29807126 - 29807158
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||| ||||||||||||||||    
T  29807126 ttatcataaatgtaaaataaaatatattgaatt 29807158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 36790927 - 36790895
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaa 193  Q
    |||||||| ||||||||||||||||||||||||    
T  36790927 tattggtgtattcttctttatcataaatgtaaa 36790895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 62 - 247
Target Start/End: Original strand, 352388 - 352571
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||| ||||||||||  |||| | | |||||| ||||||||||||||||||||||| ||||||||       | ||||||||||| ||||||||||    
T  352388 ccgtcccagtttaattgagctagtttatcatttcacacagattaagaaaagtgtataaataaaagagagaaaaa--taattttgagtgtctttgttaagt 352485  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||| |||||| | |||||||||||    
T  352486 attggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaatattaaatagagttataatt 352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 2849407 - 2849203
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| ||||||||||||||||||       |  ||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  2849407 tttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaatgta 2849308  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| |||||||||||||   ||| |||||||||||||||||| || ||||||||        ||||||||||||||||  |||| |||||||||||||    
T  2849307 aagtagaatatattgaattgagagtggtgaaagtagtattaattagaattataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatggatcaa 2849208  T
Q  292 gattc 296  Q
    |||||    
T  2849207 gattc 2849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 92 - 296
Target Start/End: Original strand, 30659435 - 30659639
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| |||||||||||||||||| ||| |||||||||       |  |||||||||  ||||| || |||| |||| |||||||||||||||||| ||    
T  30659435 tttcacacagattaagaaaagtgtacaaaggaaagagagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaatata 30659534  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||        ||||||||||||||||  |||| |||||||| ||||    
T  30659535 aagtagaatatattgaatttgaagtggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaa 30659634  T
Q  292 gattc 296  Q
    |||||    
T  30659635 gattc 30659639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 32776136 - 32775980
Alignment:
Q  92 tttcactcagattaagaaaa-gtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgt 190  Q
    |||||| || |||||||||| |||||||| |||| |||||       || |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32776136 tttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatcataaatgt 32776037  T
Q  191 aaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||| ||||||||||||| | ||| ||||||||||||||| || |||||||||||    
T  32776036 aaagtagaatatattgaattgggagtggtgaaagtagtattatttagagttataatt 32775980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 247
Target Start/End: Original strand, 39343599 - 39343781
Alignment:
Q  63 cgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagta 162  Q
    ||||||| ||||| ||||| ||||||   ||| || ||||| ||||||||||||||||||||||||||       |  |||||||||  ||||| |||||    
T  39343599 cgtcccagtttaactgagttagttgactattttacacagataaagaaaagtgtataaatgaaagagagaacaa--tcgttttgagtgcatttgtcaagta 39343696  T
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    || ||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||||||||||| |||||||||||    
T  39343697 tttgtgtattcttctttatcataaatgtaaagtagaatatattgaatttggagtggtgaaaatagtattaattagagttataatt 39343781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 299
Target Start/End: Complemental strand, 36070283 - 36070046
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtatt 164  Q
    ||||||||||||||||  | |||| ||||||||  |||||||||||| ||||||||||||||||||       || |||||||||| ||||| || ||||    
T  36070283 tcccaatttaattgagcta-ttgaacttttcacatagattaagaaaaatgtataaatgaaagagagaggaaaatggttttgagtgtctttgtcaaatatt 36070185  T
Q  165 ggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt---nnnnnnnngtaatt 261  Q
    |||||||| |||||||||||||| |||||||| |||||| ||||||   |||  ||||||||||||||||| ||| |||||||           ||||||    
T  36070184 ggtgcattattctttatcataaacgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagctataattgaagaaaaaaagtaatt 36070085  T
Q  262 aatgttgtat-caaaaactgaaatggatcaagattcctg 299  Q
    ||||||||||  |||||||||||||||||||| ||||||    
T  36070084 aatgttgtatggaaaaactgaaatggatcaaggttcctg 36070046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 45218113 - 45218253
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||||||||||||||||||| |||||||||       |  |||||||||  ||| | ||||||||||||||||||||||||||||||||||    
T  45218113 tttcacacaaattaagaaaagtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgta 45218212  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtatta 232  Q
    ||||| ||||||||||||| | |||||||||||||||||||    
T  45218213 aagtagaatatattgaattgggagttgtgaaagtagtatta 45218253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 295
Target Start/End: Complemental strand, 18731542 - 18731391
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||| | |||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||   |||||||||| ||||    
T  18731542 ttttgagtgtctttatcaagtattgatgaattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaa---agtattaattagagt 18731446  T
Q  241 tataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    |||||||        | ||||||||||||||   |||||||||||||||||||||    
T  18731445 tataattggaaaaaagcaattaatgttgtattggaaactgaaatggatcaagatt 18731391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 27337799 - 27337983
Alignment:
Q  65 tcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnn--tgattttgagtgtttttgttaagta 162  Q
    ||||| ||||| ||||| |||||| | ||||||  || ||||||||||||||||||| ||||||||         |  |||||||||| ||||| |||||    
T  27337799 tcccagtttaactgagtcagttgaccatttcacataggttaagaaaagtgtataaataaaagagagaaagagaaatagttttgagtgtctttgtcaagta 27337898  T
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| | ||| || |||||| ||||||||  ||||||||||    
T  27337899 ttggtgcattattctttatcataaatgtaaagtataatatattgaattgggagtggtaaaagtaatattaattaaagttataatt 27337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 247
Target Start/End: Original strand, 5068266 - 5068408
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||||||||||||||||||| ||       |  | |||||||||||| |||||||||||||||||||   ||||||||||||||||||| ||||    
T  5068266 attaagaaaagtgtataaatgaaagaaagaaaaaaatagtattgagtgtttttattaagtattggtgcattct---ttatcataaatgtaaagtagaata 5068362  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||   ||| ||||||||| |||||||| |||||||||||    
T  5068363 tattgaattaagagtggtgaaagtaatattaattagagttataatt 5068408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 38589817 - 38589731
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||| | |||||||||    
T  38589817 tattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 38589731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 24288573 - 24288420
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||||||||||||  ||||||||       |  |||||||||  ||| | ||||||| ||||||||||||||||||||||||||    
T  24288573 tttcacacagattaagaaaagtgtataaagtaaagagagataaa--tagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgta 24288476  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||||||||  ||| |||||| ||| |||||||| |||||||||||    
T  24288475 aagtagaatatattgaattgaaagctgtgaatgtaatattaattagagttataatt 24288420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 38181852 - 38181982
Alignment:
Q  115 tataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaa 214  Q
    ||||||||||||||||       || |||| |||||| ||| |||||||||||||||| | |  ||||||||||| ||| || ||||||||||||| |||    
T  38181852 tataaatgaaagagagagaaaaatggttttaagtgttcttggtaagtattggtgcattttccactatcataaatgcaaaatagaatatattgaattggaa 38181951  T
Q  215 gttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||| |||||||||    
T  38181952 gttgtgaaagtagtattaattagagttataa 38181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 7425842 - 7425985
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgtt-aagtattggtgcattcttctttatcataaatgtaaagtaaaat 200  Q
    ||||||| || |||||||||||| |||||       || |||| |||||| ||||| ||||||||||||||||| |  ||||||||||| |||||  |||    
T  7425842 attaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgcattctccactatcataaatgcaaagtggaat 7425941  T
Q  201 atattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||||||| |||||||||||||||||||||| | ||||||||    
T  7425942 atattgaattggaagttgtgaaagtagtattaactagagttata 7425985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 29997045 - 29997127
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| || | | ||||||||||||||||||||    
T  29997045 ttgttaattattggtgcattcttctttatcataaatgcaaagtataatatattgagttgggaattgtgaaagtagtattaatt 29997127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 34064306 - 34064212
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||   |||  |||||||| |||||||| |||||||||||    
T  34064306 ttgttaagtattggtgcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 34064212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 37264404 - 37264310
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||| ||||||  ||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||| |||||||||||    
T  37264404 ttgtcaagtattgatgcattgctctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataatt 37264310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 25778830 - 25778741
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||    
T  25778830 aagtattggtacattccttcttatcataaatgcaaagtaaaatatattgaattggaagtgatgaaagtagtattaattagagttataatt 25778741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 37496413 - 37496507
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  37496413 ttgttaagtatttgtgcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtagtattaattaaagttataatt 37496507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 5724723 - 5724815
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||| ||||||||| |  ||||||||||||||||| |||||||||||||| ||| |   |||||||||||||||| |||||||||    
T  5724723 ttgttaagtattagtgcattctccactatcataaatgtaaagtgaaatatattgaattagaaatgaagaaagtagtattaattagagttataa 5724815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 1643347 - 1643442
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagtt 241  Q
    |||| |||| ||||||||||||||||||||| | |||||||||| |||||  |||||||| ||||  |||||| |||||||||||||||| |||||    
T  1643347 agtgcttttattaagtattggtgcattcttcataatcataaatgcaaagtggaatatattaaattgaaagttgggaaagtagtattaattagagtt 1643442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 28333262 - 28333171
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||| ||||||||||||| | |||  |||||||| |||||||| ||||||||    
T  28333262 ttgttaagtattgatgcattatttcttatcataaatgtaaagtagaatatattgaattgggagtgatgaaagtaatattaattagagttata 28333171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 9602952 - 9602858
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| ||||| ||||||||| ||||||||||||| |||||| || ||||||||||   ||| |||||||||||||||||| | |||||||||    
T  9602952 ttgttaactattgatgcattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9602858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 9830523 - 9830429
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| ||||| ||||||||| ||||||||||||| |||||| || ||||||||||   ||| |||||||||||||||||| | |||||||||    
T  9830523 ttgttaactattgatgcattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9830429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 23111060 - 23111159
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||| ||||||||||||| ||||       ||||||||| ||| ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23111060 aaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 30462759 - 30462657
Alignment:
Q  145 gagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||| |||| | |||||||||||||| || ||||||||||||||||| || |||||||||||||   |||  ||||| ||||||||||| ||||||||    
T  30462759 gagtgtctttgattagtattggtgcattattttttatcataaatgtaaaatataatatattgaattgagagtgatgaaattagtattaattagagttata 30462660  T
Q  245 att 247  Q
    |||    
T  30462659 att 30462657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 37490584 - 37490691
Alignment:
Q  103 ttaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    ||||||||| |||||||||||| |||||       ||||||| ||||||||| ||||||||||||||||||| |  ||||||||||| |||||  |||||    
T  37490584 ttaagaaaaatgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataaatgcaaagtggaatat 37490683  T
Q  203 attgaatt 210  Q
    ||||||||    
T  37490684 attgaatt 37490691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 43007997 - 43007895
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||| ||||||| ||||||| ||||||||||||||| |||| || |||||||||||||   ||| |||||| || |||||||| ||||    
T  43007997 ttttgagtgtctttgtcaagtatttgtgcatttttctttatcataaatttaaattagaatatattgaattgagagtggtgaaaataatattaattagagt 43007898  T
Q  241 tat 243  Q
    |||    
T  43007897 tat 43007895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 31581458 - 31581551
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||| |  ||||||||||||||| |  |||||||||||||  || |  ||||||||||||||||| |||||||||    
T  31581458 tttgttaagtattggtgcattctccaatatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 31581551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 6838144 - 6838096
Alignment:
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6838144 attggtgcattcttctttatcataaatataaagtaaaatatattgaatt 6838096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 21412050 - 21412133
Alignment:
Q  152 tttgttaagtattggtgcattcttcttt-atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  21412050 tttgtcaagtatttatgcattcttcttttatcataaatgtaaagtaaaatatattgaa-ttgagatggtgaaagtagtattaatt 21412133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 2842018 - 2842150
Alignment:
Q  103 ttaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    ||||||||| |||||||||||| |||||       || | || |||||| |||| |||||||| |||||||| |  ||||||||||| ||||| ||||||    
T  2842018 ttaagaaaaatgtataaatgaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattctccactatcataaatgcaaagtgaaatat 2842117  T
Q  203 attgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||  |||  |||||||||||||||||    
T  2842118 attgaatttagagtgatgaaagtagtattaatt 2842150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 17266125 - 17266027
Alignment:
Q  146 agtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||| |||||||| ||||| | |||  ||||| || |||||||| ||| ||||    
T  17266125 agtgtttttattaagtattggtgcattcttcactatcataaatgcaaagtgaaatatatcgaattgggagtgatgaaaataatattaattagagatata 17266027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 32972042 - 32972128
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||| ||| ||||||||| |||||| |||||||||||||   ||| ||||||||| |||||||| | |||||||||    
T  32972042 tattggtgcattcttttttgtcataaatgcaaagtagaatatattgaattgtgagtggtgaaagtattattaattagtgttataatt 32972128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 18731636 - 18731568
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagag 130  Q
    |||||||||||||| ||||  |||||||||||| || | ||||||||||| ||||||||||||||||||    
T  18731636 ccgtcccaatttaactgagctagttgagctttttacacggattaagaaaactgtataaatgaaagagag 18731568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 47454095 - 47454003
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||||||||||||| ||||||||||| ||  || |  ||||||||||| |||||  ||||||||    
T  47454095 ttgttaagtattggtgcattctccactatcataaatgtaaagtgaaatatattgatttgtaaatgatgaaagtagtaataattatagttataa 47454003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 10355759 - 10355845
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||  ||||||||||||||| |||||| |||||||||||||   | | || |||||| |||||||| |||||||||||    
T  10355759 tattggtgcatttctctttatcataaatgcaaagtagaatatattgaattgagaatggtaaaagtaatattaattagagttataatt 10355845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 11616653 - 11616560
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat-attgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||| ||| |||||  ||||| |||||||| | ||| |||||||| ||||||||| |||||||||    
T  11616653 ttgttaagtattggtgcattctccactatcatatatgcaaagtggaatataattgaattgggagtggtgaaagttgtattaattagagttataa 11616560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 21387496 - 21387553
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||||||| |  |||||||||||||||||  |||||||||||||    
T  21387496 ttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatattgaatt 21387553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 29434584 - 29434688
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt-tgaagttgtgaaagtagtattaatttgag 239  Q
    |||| |||| |||||||||||||||||| ||||| |  | ||||||||| |||||  ||||||||||||| |||| |  ||||||||||||||||| |||    
T  29434584 ttttaagtgcttttgttaagtattggtggattctccactttcataaatgcaaagtggaatatattgaattgtgaa-tgatgaaagtagtattaattagag 29434682  T
Q  240 ttataa 245  Q
    ||||||    
T  29434683 ttataa 29434688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 40038125 - 40038219
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatata---ttgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| || |||||||  ||||||||||  |||||||||||||   || ||||||||||  ||||||||||||||||| |||||||||    
T  40038125 ttgttaagtattg-tgtattcttcactatcataaatacaaagtaaaatatactattaaatttgaagtgatgaaagtagtattaattagagttataa 40038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 47238299 - 47238214
Alignment:
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||||||| |||||| || || ||||  |   ||| |||||||||||||||||| | |||||||||    
T  47238299 attggtgcattcttctttatcataaatgcaaagtacaaaatgttgagatgagagtggtgaaagtagtattaattagtgttataatt 47238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 2846692 - 2846784
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||| |  ||||||||||  |||||  ||||||||||||| ||| |  ||||||||||||||||| |||||||||    
T  2846692 ttgttaagtattggtctattctccactatcataaattcaaagtggaatatattgaattggaattgatgaaagtagtattaattagagttataa 2846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 23186167 - 23186251
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||| |  ||||||||||  |||||| ||||||||||||||| |||  | |||||||| |||||| |||||||||    
T  23186167 tattggtgcattctccactatcataaatacaaagtagaatatattgaatttggagtgataaaagtagtgttaattagagttataa 23186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 23704007 - 23703915
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| ||||| |||||||| |  ||||||||||||||| | ||||||||||||||  || |  | ||||||||||||||| |||||||||    
T  23704007 ttgttaattattgctgcattctccactatcataaatgtaaaatgaaatatattgaattgaaaatgataaaagtagtattaattagagttataa 23703915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 30463107 - 30463015
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |   |||||||||||||| |  |||||||||||||  || |  |||||||| |||||||| |||||||||    
T  30463107 ttgttaagtattggtgcattctccacaatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtaatattaattagagttataa 30463015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 33584654 - 33584562
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| ||||| |  ||||||||||| ||| |  ||||||||||||| | |||  |||||||||||||||||  ||||||||    
T  33584654 ttgttaagtattggtgtattctccagtatcataaatgcaaaatggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 33584562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 33774059 - 33774151
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| || ||||| |  ||||||| ||| |||||  |||||| ||||||  ||||||||||||||||||||||| || ||||||    
T  33774059 ttgttaagtattgatgtattctccactatcatagatgcaaagtggaatatactgaattgtaagttgtgaaagtagtattaattagaattataa 33774151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 3667898 - 3667984
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    ||||||| ||||||| ||  ||||||||||||||||||| |||||||||||||   |||  |||||||| |||||||| || |||||    
T  3667898 aagtattagtgcattatttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagaattata 3667984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 14648943 - 14649029
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||  || |||||||||||| || ||| |||||||||||||   |||  |||||||| |||||||| |||||||||||    
T  14648943 tattggtgcatttctcattatcataaatgcaaggtagaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 14649029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 40590835 - 40590933
Alignment:
Q  147 gtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||||||| | |  ||||||||||  |||||| ||||||||||| |   | |  | ||||||||||||||| |||||||||    
T  40590835 gtgtttttgttaagtattggtgcattttccgctatcataaatacaaagtagaatatattgaaatgagaataataaaagtagtattaattagagttataa 40590933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 44604443 - 44604585
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||| || |||||||||||| |||||       ||||||| |||||| |||||||||||||||  ||||| |  ||||||||| | |||||  ||||    
T  44604443 attaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttcttgttaagtattggtttattctccactatcataaa-gcaaagtggaata 44604541  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||| ||   |||  ||||||||||||||||| |||||||||    
T  44604542 tattgagttgagagtgatgaaagtagtattaattagagttataa 44604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 46288473 - 46288539
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||| |||| |||||  |||||||||||||  ||||| ||||||||||||||||| |||||||||    
T  46288473 tatcattaatgcaaagtggaatatattgaattgaaagttatgaaagtagtattaattagagttataa 46288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 12308422 - 12308377
Alignment:
Q  200 tatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||    
T  12308422 tatattgaattggaagttgtgaaagtaatattaattagagttataa 12308377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 21446540 - 21446475
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatatt 205  Q
    |||||||||||  || |||| |||| |||||||||| |||||||||||| ||||||| ||||||||    
T  21446540 attttgagtgtccttattaattattagtgcattcttttttatcataaatataaagtataatatatt 21446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 18235281 - 18235189
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  |||||||||||||||||  |||||||  |||| ||| |  ||||| || |||||||| ||| |||||    
T  18235281 ttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatatgaaattggaaatgatgaaaataatattaattagagctataa 18235189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 19505809 - 19505868
Alignment:
Q  176 ctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||||||||||||| ||||||||||  ||||  ||||| || ||||||||    
T  19505809 ctttatcataaatgtaaagtaaaagatattgaattataagtgatgaaattaatattaatt 19505868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 27234606 - 27234503
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||||||||||||||||||| |||||||| |  ||||||||||| |||   ||||||||| ||||   |||  ||||| |||||||||||  |||    
T  27234606 ttttaagtgtttttgttaagtattgatgcattctccactatcataaatgcaaaacgaaatatattaaattgtgagtgatgaaaatagtattaattaaagt 27234507  T
Q  241 tata 244  Q
    ||||    
T  27234506 tata 27234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 23058960 - 23058858
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| | ||||||||||||||||       |  |||| |||||| |||||| ||||||||||||||| |  ||||||||||| ||||| |||||    
T  23058960 attaagaaaaatatataaatgaaagagagagaaaaatagttttaagtgttcttgtta-gtattggtgcattctccactatcataaatgcaaagtgaaata 23058862  T
Q  202 tatt 205  Q
    ||||    
T  23058861 tatt 23058858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 25940790 - 25940856
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    |||||||||||| ||| || |||||||| |||||  |||  ||||||||||||||||| ||||||||    
T  25940790 ttatcataaatgcaaactagaatatattaaatttagagtgatgaaagtagtattaattagagttata 25940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 29257612 - 29257546
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||  ||||||||||||| | |||  |||||||| |||||||| |||||||||    
T  29257612 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 29257546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 37157259 - 37157169
Alignment:
Q  156 ttaagtattggtgcattcttctt-tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||| |||   |||||||||||||||||| |||||||| ||||  || |  |||||  |||||||||| |||||||||    
T  37157259 ttaagtattggtgcatttttccactatcataaatgtaaagtagaatatattaaattgaaaatgatgaaaaaagtattaattagagttataa 37157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 46095424 - 46095518
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||| | ||||||| |||| |||||||||    ||||||||||| ||||| ||||||||||||||   |||  | |||||||||||||||    
T  46095424 ttttgagtgctcttgttaaatatttgtgcattctctactatcataaatgcaaagtgaaatatattgaattgagagtgataaaagtagtattaatt 46095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 27621871 - 27621838
Alignment:
Q  214 agttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||| |||||||||||    
T  27621871 agttgtgaaagtagtattaattagagttataatt 27621838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 30459145 - 30459096
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||| |||||| |||||||| ||||||||||| || |||||||||||||    
T  30459145 tattgatgcattattctttataataaatgtaaaatagaatatattgaatt 30459096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 49100518 - 49100575
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||  ||||| |  |||||||||||||||||  |||||||||||||    
T  49100518 ttgttaagtattggtttattctccactatcataaatgtaaagtggaatatattgaatt 49100575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 29645237 - 29645305
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaa 208  Q
    ||||| |||||| ||||||||||||||||||||  || | | |||||| | |||||| |||||||||||    
T  29645237 attttaagtgttcttgttaagtattggtgcatttgtcataaacataaacgcaaagtagaatatattgaa 29645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 32346597 - 32346530
Alignment:
Q  165 ggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||  || |||||||||||| ||||||||||||||| |||||| |    |||||||||||||||||    
T  32346597 ggtgcatttctccttatcataaatgcaaagtaaaatatattaaatttgga---atgaaagtagtattaatt 32346530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 298
Target Start/End: Original strand, 1908416 - 1908655
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgta---taaatgaaagagagnnnnnnntgattttgagtgtttttgtta 158  Q
    |||||||||||||| ||||| |||| |  ||||||| |||||||| |||| ||||   ||||||||| ||||       || |||||||||| |||   |    
T  1908416 ccgtcccaatttaactgagttagtttaaattttcacacagattaaaaaaaatgtactataaatgaaatagagagaaaaatggttttgagtgtcttttgca 1908515  T
Q  159 agtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngta 258  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| || |||||||| |||||||||||        |||    
T  1908516 agtattagtgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaaataatattaattagagttataattgaaaaaaagta 1908615  T
Q  259 attaatgttgtatcaaaaactgaaatggatcaagattcct 298  Q
    |||||||||||||  |||| ||||||||||||||||||||    
T  1908616 attaatgttgtattgaaaattgaaatggatcaagattcct 1908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 9725060 - 9724879
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||| ||||||||||||| | ||   | |||||| || |||||||||||||||||||||||||||||       |||||||||||| |||| | ||||    
T  9725060 ccgtcctaatttaattgagtcattttctcatttcacacatattaagaaaagtgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagt 9724961  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |  |  |||||||||||||||||| |||||||||    
T  9724960 attggtgcattcttctttatcataaatgtaaagtagaatatattgaattgg--ggggtgaaagtagtattaattagagttataa 9724879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 24356263 - 24356059
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| |||||||||||||||||||||| |||||||||       |  |||||||||  ||| | |||||||| |||||||||||||||||||||||||    
T  24356263 tttcacacagattaagaaaagtgtataaaggaaagagagagaaaactagttttgagtgcctttttcaagtattgatgcattcttctttatcataaatgta 24356164  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| ||||| ||||||| | ||| |||||||||||||||||| |||||||||||        ||||||||||||||||  |||| |||||||| ||||    
T  24356163 aagtagaatatgttgaattgggagtcgtgaaagtagtattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaa 24356064  T
Q  292 gattc 296  Q
    |||||    
T  24356063 gattc 24356059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 295
Target Start/End: Complemental strand, 43182454 - 43182223
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||| ||||| ||||| ||||   | |||||| ||||||||||||| |||||||| |||||||||       | ||||||||||| ||||| || |    
T  43182454 ccgtcccagtttaactgagtcagttttccatttcacacagattaagaaaaatgtataaaggaaagagagaaaaaaataattttgagtgtctttgtcaaat 43182355  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaatt 261  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||| ||||| |||||| |||||||||||  ||||||||||        ||||||    
T  43182354 attggtgcattcttctttattataaatgt--agtataatatattgaattggaagtggtgaaaatagtattaattaaagttataattgaaaaaaagtaatt 43182257  T
Q  262 aatgttgtatcaaaaactgaaatggatcaagatt 295  Q
    ||||||||||  |||| |||||||||||||||||    
T  43182256 aatgttgtattgaaaattgaaatggatcaagatt 43182223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 296
Target Start/End: Original strand, 7931500 - 7931655
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||    
T  7931500 ttttgagtgtctttttcaagtattagtgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagttgtgaaagtagtattaattagagt 7931599  T
Q  241 tataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagattc 296  Q
    |||||||        ||||||||||||||||  |||| |||||||| |||| ||||    
T  7931600 tataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaaaattc 7931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 18460640 - 18460485
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| |||||||||||||||||||||||||||||||        ||||||||||||| ||||| || ||||||| ||||||||||| |||||||||||    
T  18460640 tttcacacagattaagaaaagtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaatgta 18460541  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||||||||   ||||||  ||||| |||||||| |||||||||||    
T  18460540 aagtagaatatattgaattgagagttgtagaagtaatattaattagagttataatt 18460485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 7213627 - 7213474
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| ||||||||||||| ||||       ||||||||||||  ||| | || ||||||||||||||||||||| |||||||||    
T  7213627 tttcacacagattaagaaaaatgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatattggtgcattcttctttattataaatgta 7213528  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||  |||||||||||||   |||||||||||||||||||||| |||||||||    
T  7213527 aagtggaatatattgaattgagagttgtgaaagtagtattaattagagttataa 7213474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 37529075 - 37529181
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||| |||||||| ||||| ||||||||| |||||||| ||||    
T  37529075 ttttgagtgtctttgttaagtattggtctatttttctttatcataaatgtaaagtagaataaattgaattggaagtggtgaaagtaatattaattagagt 37529174  T
Q  241 tataatt 247  Q
    |||||||    
T  37529175 tataatt 37529181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 9472583 - 9472419
Alignment:
Q  83 agttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatc 182  Q
    |||||| | |||||| || |||||||||| |||||||||||||||||        || ||| |||||| ||||| |||||||| | ||||||||||||||    
T  9472583 agttgaccatttcacacatattaagaaaaatgtataaatgaaagagatagaacaatggtttagagtgtctttgtcaagtattgatacattcttctttatc 9472484  T
Q  183 ataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||| |||| |||||||||||||   ||| ||||||||||||||||||  ||||||||||    
T  9472483 ataaatgtatagtagaatatattgaattgatagtggtgaaagtagtattaattatagttataatt 9472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 18181167 - 18181323
Alignment:
Q  91 ttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgt 190  Q
    ||||||| ||||||||||||||||||||| ||| ||||||       || |||| |||| |||||||| ||||||||||||||| |  |||||||||||     
T  18181167 ttttcacacagattaagaaaagtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  191 aaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||| ||||| ||||||| | | |  ||||||||||||||||| |||||||||||    
T  18181267 aaagtagaatattttgaattgggaataatgaaagtagtattaattagagttataatt 18181323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 28572314 - 28572207
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| | |||||||||||||||||||||| |  ||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||      
T  28572314 tgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagtagtattaattac 28572215  T
Q  238 agttataa 245  Q
    ||||||||    
T  28572214 agttataa 28572207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 13222151 - 13222065
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||||    
T  13222151 tattggtgtattcttctttatcataaatgcaaagtaaaatatattgaattggaagtggtgaaagtaatattaattagtgttataatt 13222065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 3200038 - 3199895
Alignment:
Q  102 attaagaaaag-tgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaat 200  Q
    ||||||||||| ||||||||||||||||||       || ||||||||||  ||||||| |||| ||||||| ||   ||||||||||| |||||| |||    
T  3200038 attaagaaaagatgtataaatgaaagagagagaaaaatggttttgagtgtcattgttaactatttgtgcattttt---tatcataaatgcaaagtataat 3199942  T
Q  201 atattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||| | ||| |||||||||||||||||| |||||||||||    
T  3199941 atattgaattgggagtggtgaaagtagtattaattagagttataatt 3199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 247
Target Start/End: Complemental strand, 28844206 - 28844056
Alignment:
Q  100 agattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgca---ttcttctttatcataaatgtaaagta 196  Q
    |||||||||||| ||||||||||||||||||       | ||||||| ||| ||||  ||||||||||| |   ||||||||||||||||||||||||||    
T  28844206 agattaagaaaaatgtataaatgaaagagagataaaaataattttgaatgtctttggcaagtattggtgtaatattcttctttatcataaatgtaaagta 28844107  T
Q  197 aaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
     |||||||||||||   ||| ||||||||| |||| ||| |||||||||||    
T  28844106 taatatattgaattgagagtggtgaaagtattatttattagagttataatt 28844056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 19515972 - 19515878
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||| |||| ||| |||||||||||| ||||||||||||||||||||  ||||  ||||||||||||||||| |||||||||||    
T  19515972 ttgtcaagtattggttcatttttcattatcataaatgcaaagtaaaatatattgaattgtaagtaatgaaagtagtattaattagagttataatt 19515878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 3100506 - 3100402
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| | ||||||||||||| |||||||| |  ||||||||||| |||||  |||||||| |||| |||||||||||||||||||||||| |    
T  3100506 tgattttaagtgatcttgttaagtattgctgcattctccactatcataaatgcaaagtggaatatattaaattggaagttgtgaaagtagtattaattag 3100407  T
Q  238 agtta 242  Q
    |||||    
T  3100406 agtta 3100402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 23685062 - 23684958
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||||||| ||||||||| |  ||||||||||| ||||| ||||||||||||||   |||  ||||||||||||||||| ||||    
T  23685062 ttttaagtgtttttgttaagtattagtgcattctccactatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagt 23684963  T
Q  241 tataa 245  Q
    |||||    
T  23684962 tataa 23684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 44534484 - 44534591
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| | |||| ||||||||||||||| |||||| |  ||||||||||| |||||  ||||||||||||| |||| ||||||| ||||||||||| |    
T  44534484 tgattttaaatgttcttgttaagtattggtacattctccactatcataaatgcaaagtggaatatattgaattggaagctgtgaaattagtattaattag 44534583  T
Q  238 agttataa 245  Q
    ||||||||    
T  44534584 agttataa 44534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 28527116 - 28526963
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||||||| ||||        || |||| |||| | |||||||||||| |||||||||||  || |||| |||||    
T  28527116 tttcacacatattaagaaaaatgtataaatgaaggagaaaaaaaaatggttttaagtgctcttgttaagtattcgtgcattcttcactaccatatatgta 28527017  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||  | ||||||||||| ||||||||||||||| ||||||||  ||||||||    
T  28527016 aagtggactatattgaattggaagttgtgaaagtaatattaattatagttataa 28526963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 62 - 296
Target Start/End: Complemental strand, 36748330 - 36748090
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||| ||||| ||||| ||||   | |||||| || ||||||||||||||||||| |||| ||||       |  ||||||||   ||| | ||||    
T  36748330 ccgtcccagtttaactgagtcagttttccatttcacacatattaagaaaagtgtataaaagaaatagagagaaaaatagttttgagttcctttttcaagt 36748231  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagt------agtattaatttgagttataattnnnnnnnn 255  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||||   | ||||||||||      |||||||||| |||||||||||            
T  36748230 attggtgcgttattctttatcataaatttaaagtaaaatatattgaattgagaattgtgaaagtagtagtagtattaattagagttataattggagaaaa 36748131  T
Q  256 gtaattaatgttgtatcaaaaactgaaatggatcaagattc 296  Q
     ||||||||| || || ||||| ||||||||||||||||||    
T  36748130 ataattaatgctgcattaaaaagtgaaatggatcaagattc 36748090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 2427448 - 2427369
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||| |||||| |||||||||||| ||||||||| |||||| ||||||||||||| | ||| ||||||||||||||||||    
T  2427448 ttaattattggagcattcttctttgtcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaatt 2427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 4794677 - 4794570
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    |||||||||||| |||| || ||||| |||||| ||  |||||||||||| |||||  |||||||||||||  ||||  ||||||||||||||||| |||    
T  4794677 attttgagtgttcttgtcaaatattgatgcattttttattatcataaatgcaaagtggaatatattgaattgaaagtgatgaaagtagtattaattagag 4794578  T
Q  240 ttataatt 247  Q
    ||||||||    
T  4794577 ttataatt 4794570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 24451885 - 24451781
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||| || | ||||||| ||||||||||||||||||||||  |||| ||||||||| ||| ||||  ||||||||| |||||||| ||||    
T  24451885 ttttgagtgtctttattgaatattggttcattcttctttatcataaatgt--agtagaatatattgtattggaaggggtgaaagtaatattaattagagt 24451788  T
Q  241 tataatt 247  Q
    |||||||    
T  24451787 tataatt 24451781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 2048375 - 2048289
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||   ||| |||||| || |||||||| |||||||||||    
T  2048375 tattggtgcattcttgtttatcataaatgcaaagtagaatatattgaattgagagtagtgaaaataatattaattagagttataatt 2048289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 8550597 - 8550752
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||| |||||| ||||||| ||||||||||       || |||| |||||| |||| ||||||| ||||||||| | |||||||||||| |    
T  8550597 tttcacacacatttagaaaaatgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctccattatcataaatgca 8550696  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||  |||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  8550697 aagtctaatatattgaattaagagtgatgaaagtagtattaattatagttataatt 8550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 31348594 - 31348508
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||| ||||||||||||| | |||| ||||||||||||| | | | |||||||||||||||||| | |||||||||    
T  31348594 tattggtgcattcttttttatcataaatgcatagtagaatatattgaattaggaatggtgaaagtagtattaattagtgttataatt 31348508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 43427110 - 43427196
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||||||||||| ||| || ||||||||||||| | |||  ||||||||||||||||| | |||||||||    
T  43427110 tattagtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaagtagtattaattagtgttataatt 43427196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 4283040 - 4283129
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||||||||   ||| || |||||||||| |||| ||||| |||||    
T  4283040 aagtattggtgcattcctctttatcataaatgtaaaatagaatatattgaattgagagtggtaaaagtagtataaattagagttgtaatt 4283129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 14384299 - 14384388
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||   |||   |||||||||||||||| || ||||||||    
T  14384299 aagtattggtgcattcatcattatcataaatgtaaagtataatatattgaattgagagtgaagaaagtagtattaattagaattataatt 14384388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 41436183 - 41436078
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||| |||||||||||||||||||| || |||||||  ||||||||||| |||||  |||||||||||||   | |  ||||||||||||||||| |||    
T  41436183 attttaagtgtttttgttaagtattgatgtattcttcactatcataaatgcaaagtggaatatattgaattgagaatgatgaaagtagtattaattagag 41436084  T
Q  240 ttataa 245  Q
    ||||||    
T  41436083 ttataa 41436078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 2882121 - 2881984
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||| |||||||||||||||||        ||||||| |||| | |||||||||||||||||||||| |  ||||||||||| ||||| ||||||||||     
T  2882121 aaaaatgtataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaagtgaaatatattgt 2882022  T
Q  208 atttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||   ||  |||||| ||||||| |||||||||||||    
T  2882021 attgagaggagtgaaaatagtattcatttgagttataa 2881984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 24775824 - 24775916
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| ||||| |  ||||||||||||||||| ||||||||||||||  || |  ||||||||||||||||  |||||||||    
T  24775824 ttgttaagtattggtgtattctccactatcataaatgtaaagtgaaatatattgaattaaaaatgatgaaagtagtattaatcagagttataa 24775916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 6685706 - 6685773
Alignment:
Q  180 atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||| || ||||||||    
T  6685706 atcataaatgtaaagtagaatatattgaattggaagtggtgaaagttgtattaattagaattataatt 6685773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 38280151 - 38280255
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||| |||| ||||       || |||||||||  ||| |||| |||||||||||||||||||||||||||||||    
T  38280151 tttcacacatattaagaaaaatgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaatgta 38280250  T
Q  192 aagta 196  Q
    |||||    
T  38280251 aagta 38280255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 6972564 - 6972650
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||   ||| || |||||| |||||||| | |||||||||    
T  6972564 tatttgtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtaaaagtaatattaattagtgttataatt 6972650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 733988 - 734121
Alignment:
Q  113 tgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttg 212  Q
    ||||||||||||||||||       ||||||||| | ||||||| || |||||||||||||    |||||||||||||| ||||||||||||||| || |    
T  733988 tgtataaatgaaagagagagaaaaatgattttgaatatttttgtcaaatattggtgcattcactattatcataaatgtatagtaaaatatattgagttgg 734087  T
Q  213 aagttgtgaaagtagtattaatttgagttataatt 247  Q
     |||  |||||||| |||| ||| |||||||||||    
T  734088 gagtgatgaaagtaatatt-attagagttataatt 734121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 15859359 - 15859450
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| ||||||| |   |  ||||||| ||||| |||||||||||||| ||||||||||||||| | |||||| |||||||||    
T  15859359 ttttgttaagtattggggcattctcc---acaataaatgcaaagtgaaatatattgaattagaagttgtgaaagtaatgttaattagagttataa 15859450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 28108391 - 28108483
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||| |||||||||  |||||||||||||   | |  ||||||||||||||||| |||||||||    
T  28108391 ttgttaagtattggtgcattctccactatcatacatgtaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataa 28108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 28301525 - 28301433
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||   |||  ||||||||||||||||| |||||||||    
T  28301525 ttgttaagtattggtctattctccactatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 28301433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 39807393 - 39807260
Alignment:
Q  64 gtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtat 163  Q
    |||||| |||||  |||| |||||| | |||| | ||||||||||||| ||||||||| |||||||        || |||||||||  ||||| ||||||    
T  39807393 gtcccagtttaaccgagtcagttgaccatttctcacagattaagaaaaatgtataaatcaaagagaaagaaaaatggttttgagtgcctttgtgaagtat 39807294  T
Q  164 tggtgcattcttctttatcataaatgtaaagtaa 197  Q
    |||||||||||||||||| |||||| ||| ||||    
T  39807293 tggtgcattcttctttataataaatataatgtaa 39807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 928562 - 928646
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||  |||   ||| |||||||||||||||||| | |||||||||    
T  928562 tattggtgcattcttctttatcataaatgcaaaatagaatatatt--attgagagtggtgaaagtagtattaattagtgttataatt 928646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 2756778 - 2756671
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||| |||| | |||| ||||||| |||||||   | ||||||||||||||||||| |||||||| |||| |||||  || || ||||||||||| |||    
T  2756778 attttaagtgctcttgtcaagtattagtgcatttaccattatcataaatgtaaagtagaatatattaaattggaagtgatgtaaatagtattaattagag 2756679  T
Q  240 ttataatt 247  Q
    ||||||||    
T  2756678 ttataatt 2756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 5211974 - 5212056
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||| ||||||| |    ||||||||||| |||||  |||||||||||||  |||||||||||||||||||||||    
T  5211974 ttgttaagtatttgtgcattatcaactatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaatt 5212056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 39166728 - 39166794
Alignment:
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||| |||||||||||||||||||| ||||||||||||| | ||| ||||||||| ||| ||||    
T  39166728 cattcttttttatcataaatgtaaagtataatatattgaattgggagtagtgaaagtaatataaatt 39166794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 314510 - 314461
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  314510 tattgatgcattcttctttatcataaatgcaaagtagaatatattgaatt 314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 8031847 - 8031775
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||  ||||| ||||||||||||| || ||||| | |||||||||||| ||||| ||||||||||||||    
T  8031847 tgattttatgtgttcttgttaagtattgatgtattctccattatcataaatgcaaagttaaatatattgaatt 8031775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 10818712 - 10818620
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||    ||||||||||| ||||| |||| ||||||||| | |||  |||||||  |||||||| |||||||||    
T  10818712 ttgttaagtattggtgcattctctagtatcataaatgcaaagtgaaatgtattgaattaggagtgatgaaagtgatattaattagagttataa 10818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 43077742 - 43077834
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| |||||||||||| | |  | ||||||||||||||| ||||||||||||||  || |  |||||||| |||||||| |||||||||    
T  43077742 ttgttaactattggtgcattttccactgtcataaatgtaaagtgaaatatattgaattgaaaatgatgaaagtaatattaattagagttataa 43077834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 14890420 - 14890369
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaa 192  Q
    |||||||||| ||| | ||||||| |||||||||||||||||||||||||||    
T  14890420 ttttgagtgtctttatcaagtattagtgcattcttctttatcataaatgtaa 14890369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 435094 - 435176
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||| |||| ||||||||| |  ||||||||||||||||| ||||||||||||||   | |  |||||||||||||||||    
T  435094 ttgttaaatattagtgcattctccactatcataaatgtaaagtgaaatatattgaattgagaatgatgaaagtagtattaatt 435176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 6723884 - 6723969
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||| || ||||||||||| ||||||| ||| ||||||| ||| |||  |||||||  |||||||| |||||||||||    
T  6723884 tattggtgcattcctcattatcataaatataaagtagaatttattgaa-ttggagtgatgaaagttatattaattagagttataatt 6723969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 38872946 - 38873013
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtat 230  Q
    ||||| ||||||| |||||||||||||| ||||||  ||||||||||||| | ||| |||||||||||||    
T  38872946 tattgatgcattcctctttatcataaatataaagt--aatatattgaattgggagtggtgaaagtagtat 38873013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 565195 - 565138
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagt 195  Q
    ||||||| |||||| |||||||||||||||||||||| |  ||||||||||| |||||    
T  565195 tgattttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaagt 565138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 13375153 - 13375263
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaag-tattggtgcattcttctttatcataaatgtaaagt-aaaa 199  Q
    |||||||||| |||||||||||| |||||       | ||||| ||||   |||||||| |||||||||||||| |  ||||||||||||||||| ||||    
T  13375153 attaagaaaaatgtataaatgaaggagagagataaataattttaagtgcagttgttaaggtattggtgcattctccactatcataaatgtaaagtgaaaa 13375252  T
Q  200 tatattgaatt 210  Q
    |||||||||||    
T  13375253 tatattgaatt 13375263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 25604448 - 25604395
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||||  |||||||||||| ||| || |||||||||||||    
T  25604448 taagtattggtgcattctttcttatcataaatgcaaattagaatatattgaatt 25604395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 26273825 - 26273768
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||| |||||| ||||||||||||| | |||  |||||||||||||||||    
T  26273825 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaatt 26273768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 28925864 - 28925921
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||| |||||||| |  |||||||| |||||||| ||||||||||||||    
T  28925864 ttgttaagtattgatgcattctccactatcataattgtaaagtgaaatatattgaatt 28925921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 33755399 - 33755293
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||||| || |||||||||||| |||||       ||||||| |||||| |||||||||||||||  |||||| | ||||||||||| ||| |  ||||    
T  33755399 attaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttattgttaagtattggtctattcttttctatcataaatgcaaaatggaata 33755300  T
Q  202 tattgaa 208  Q
    |||||||    
T  33755299 tattgaa 33755293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 33880214 - 33880157
Alignment:
Q  188 tgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| ||||||||||||| | ||| ||||||||| |||||||| |||||||||    
T  33880214 tgtaaagtagaatatattgaattgggagtggtgaaagtaatattaattagagttataa 33880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 10069550 - 10069691
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| | ||||| ||||||||||       ||||||| |||  |||||| ||||||| |||||||   | |||||||||||| |||||  ||||    
T  10069550 attaagaaaaatatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttaccattatcataaatgcaaagtcgaata 10069649  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttat 243  Q
    |||||||||   |||  |||||||| |||||||| |||||||    
T  10069650 tattgaattgagagtgatgaaagtattattaattagagttat 10069691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 30757584 - 30757676
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||  |||||| | |  ||||||||||||||| |  ||||||||||||| | | |  ||||||||||||||||| |||||||||    
T  30757584 ttgttaagtattaatgcattttccactatcataaatgtaaattggaatatattgaattgggaatgatgaaagtagtattaattagagttataa 30757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 37247900 - 37247992
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||    ||  |||||||| |||||||| |||||||||    
T  37247900 ttgttaagtattggtctattctccactatcataaatgcaaagtgaaatatattgaattgagtgtgatgaaagtaatattaattagagttataa 37247992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 31592641 - 31592547
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||| |||||||||  |||||||||||  |||||| |||||||||||||   |||  ||||| || ||||||||  ||||||||||    
T  31592641 ttgtcaagtattgctgcattctttcttatcataaatacaaagtagaatatattgaattgagagtgatgaaaataatattaattaaagttataatt 31592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 36396480 - 36396562
Alignment:
Q  159 agtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagtt 241  Q
    |||||| ||||||||| |  | ||||||||| |||||| |||||||| ||||  |||||||||||  |||||||||| |||||    
T  36396480 agtattagtgcattctccactgtcataaatgcaaagtataatatattaaattaaaagttgtgaaataagtattaattagagtt 36396562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 43950459 - 43950521
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||| || ||| | | ||| |||||||| |||||| |||||||||||||    
T  43950459 tgtttttgttaagtattgatgtattttccattaacataaatgcaaagtagaatatattgaatt 43950521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 7649978 - 7650083
Alignment:
Q  140 attttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgag 239  Q
    ||||| |||| | |||||||||| || |||||||| |  ||||||||||| |||||  |||||||||||||  || |  ||||  ||||||||||| |||    
T  7649978 attttaagtgctcttgttaagtactgatgcattctccactatcataaatgcaaagtggaatatattgaattgaaaatgatgaagatagtattaattagag 7650077  T
Q  240 ttataa 245  Q
    ||||||    
T  7650078 ttataa 7650083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 37028842 - 37028757
Alignment:
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| ||| | | |||||||||||||||||| ||||||  |||| |  ||||  |||||||| |||||||| |||||||||    
T  37028842 gtattggtgtattatccattatcataaatgtaaagtgaaatattatgaactgaaagtgatgaaagtaatattaattagagttataa 37028757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 39095717 - 39095628
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| | |||||| | |||||||||||| |||||  |||||||||||||   |||  |||||||| ||||||||  ||||||||||    
T  39095717 aagtattgatacattctccattatcataaatgcaaagtggaatatattgaattgtcagtgatgaaagtaatattaattaaagttataatt 39095628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 40710679 - 40710611
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||| || || |||| ||||||||||| |||||||| ||| ||||||  ||||||||||||    
T  40710679 ttttgagtgtttt-gtcaaatattcgtgcattcttccttatcatacatgcaaagtagcatatattgaatt 40710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 6075551 - 6075495
Alignment:
Q  191 aaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||| |||||||| |||| | |||  ||||||||||||||||| |||||||||||    
T  6075551 aaagtagaatatattaaattgggagtgatgaaagtagtattaattagagttataatt 6075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 29937932 - 29937987
Alignment:
Q  155 gttaagtattggtgcatt-cttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||| ||||||| |||||| |||||||||  ||||||||||||||||||||    
T  29937932 gttaagtattagtgcatttcttctt-atcataaatacaaagtaaaatatattgaatt 29937987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 43056441 - 43056409
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||| |||||||||||||    
T  43056441 ttatcataaatgtaaagtataatatattgaatt 43056409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 92 - 295
Target Start/End: Original strand, 6355 - 6559
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| |||||||| |||||||||       ||||||||||||| || || |||||||| |||||||||||||||||||||||||    
T  6355 tttcacacagattaagaaaaatgtataaaggaaagagagagagagatgattttgagtgtcttagtcaagtattgatgcattcttctttatcataaatgta 6454  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt-nnnnnnnngtaattaatgttgtatcaaaaactgaaatggatca 290  Q
    |||||||||||||||||||   ||| ||||||||| |||||||| |||||||||||         ||||||||||||||||  |||| |||||||| |||    
T  6455 aagtaaaatatattgaattgagagtggtgaaagtaatattaattagagttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatgggtca 6554  T
Q  291 agatt 295  Q
    |||||    
T  6555 agatt 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 8e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 33017948 - 33018054
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||| ||||    
T  33017948 ttttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagt 33018047  T
Q  241 tataatt 247  Q
    |||||||    
T  33018048 tataatt 33018054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 33921473 - 33921579
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||||| ||||    
T  33921473 ttttgagtgtgtttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtaaaagtagtattaattagagt 33921572  T
Q  241 tataatt 247  Q
    |||||||    
T  33921573 tataatt 33921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 62 - 296
Target Start/End: Original strand, 3166033 - 3166267
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||| |||||||||  |||  |||| || |||| || |||||||| |||||||||||||||||||||||       |  |||||||||| |||   ||||    
T  3166033 ccgttccaatttaaccgagatagtttagttttttacacagattaaaaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagt 3166132  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaatt 261  Q
    |||| || ||| ||||||||||||||||||||||| ||||||||||||  | | | |||||||||||||||||| |||||||||||        ||||||    
T  3166133 attgatgtatttttctttatcataaatgtaaagtagaatatattgaatgaggattggtgaaagtagtattaattagagttataattggaaaaaagtaatt 3166232  T
Q  262 aatgttgtatcaaaaactgaaatggatcaagattc 296  Q
    ||||||||||  |||| ||||||||||||||||||    
T  3166233 aatgttgtattgaaaattgaaatggatcaagattc 3166267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 8232324 - 8232480
Alignment:
Q  150 tttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnn 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||   | ||||||||||| |||||||| || ||||||||      
T  8232324 ttttttttaagtattggtgcattcttctttatcataaatgtaaagt-aaatatattgaattgagacttgtgaaagtactattaattagaattataattgg 8232422  T
Q  250 nnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagattcctgagagaata 307  Q
          ||||||||||||||||  |||| |||||||||||||||||| ||||| ||||    
T  8232423 aaaaaagtaattaatgttgtattgaaaagtgaaatggatcaagattcttgagacaata 8232480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 3874016 - 3874145
Alignment:
Q  103 ttaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    |||| |||||||||||||||||||||||       ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||  |||||    
T  3874016 ttaaaaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatat 3874115  T
Q  203 attgaatttgaagttgtgaaagtagtatta 232  Q
    |||||||| | ||| ||||||||| |||||    
T  3874116 attgaattaggagtagtgaaagtaatatta 3874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 9354444 - 9354553
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata---tattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||||   ||||||||| | |||||||||||||||||||||| |    
T  9354444 ttttgagtgtctttgttaaatattggtccattcttctttatcataaatgtagagtagaatatactattgaattaggagttgtgaaagtagtattaattag 9354543  T
Q  238 agttataatt 247  Q
    ||||||||||    
T  9354544 agttataatt 9354553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 31265870 - 31265778
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  |||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  31265870 ttgttaagtattggtgcattctccactatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 31265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 15371887 - 15371973
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||| | |||||||||    
T  15371887 tattagtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 15371973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 3604616 - 3604708
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| | ||||  |||||| |||||  ||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  3604616 ttgttaagtattggtgcattctccattattgtaaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 3604708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 4238512 - 4238421
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||  ||||||||    
T  4238512 ttgttaagtattggtgcattcttcactatcataaatgtaaagtgaaatctattgaattgaaagttgtg-aagtagtattaattaaagttataa 4238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 14312652 - 14312721
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||    
T  14312652 ttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatgtattgaatt 14312721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 34803676 - 34803817
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttat--cataaatgtaaagtaaaatatatt 205  Q
    ||||||||||||| |||||||||       || |||||||||| ||| | || ||||| ||||||| |||||||  |||||||| ||| |||||||||||    
T  34803676 aaaagtgtataaaggaaagagagaggaaaatggttttgagtgtctttatcaactattgatgcattcctctttatatcataaatgcaaaataaaatatatt 34803775  T
Q  206 gaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||   ||||||||||||||||||||||  ||||||||||    
T  34803776 gaattgagagttgtgaaagtagtattaattatagttataatt 34803817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 15081514 - 15081422
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||| ||||||||| |  ||||||||| |||||||  ||||||||||||| ||| || ||||||||||||||||| |||||||||    
T  15081514 ttgttaagtatttgtgcattctccactatcataaacgtaaagtggaatatattgaattggaaattatgaaagtagtattaattagagttataa 15081422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 4552992 - 4552906
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||| ||| || |||||||| |||| | ||| ||||||||| |||||||| | |||||||||    
T  4552992 tattggtgcattcttctttatcataaatgcaaattagaatatattaaattgggagtggtgaaagtaatattaattagtgttataatt 4552906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 20027688 - 20027638
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20027688 tgattttgagtgtctttgttaagtattggtgcattcttctttatcataaat 20027638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 14306245 - 14306314
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| |||| ||||    
T  14306245 ttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatgtattaaatt 14306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 7301084 - 7301188
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||| ||||||||||||| ||||||||| | ||||||||||||||||||  |||||||||||||  || |  |||||||| ||||| || ||||    
T  7301084 ttttaagtgtgtttgttaagtatttgtgcattctccattatcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtaatattagttagagt 7301183  T
Q  241 tataa 245  Q
    |||||    
T  7301184 tataa 7301188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 15321249 - 15321335
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||   | |  ||||||||||||||||| | |||||||||    
T  15321249 tattggtgcgttcttctttatcataaatgcaaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgttataatt 15321335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 2310317 - 2310386
Alignment:
Q  166 gtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||||||||||||| || ||| ||||||||||||| | |||  |||||||||||||||||    
T  2310317 gtgcattcttctttatcataaatgcaaggtataatatattgaattgggagtgatgaaagtagtattaatt 2310386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 34915814 - 34915886
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| |||||||  |||||||||||||||||||| | |||||||||||| |||||  |||||||||||||    
T  34915814 tgattttaagtgtttacgttaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaatt 34915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 28539084 - 28538993
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||| ||||| ||||| |||| ||||||| |||||| |||||||| ||||  ||||  ||||||| ||||||||| |||||||||||    
T  28539084 ttaagtattagtgcaatcttccttattataaatgcaaagtagaatatattaaattaaaagtgatgaaagtggtattaattagagttataatt 28538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 26356333 - 26356267
Alignment:
Q  180 atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataat 246  Q
    |||||||||| ||||| |||||||||||||| |||||  |||||||||||||||||  |||||||||    
T  26356333 atcataaatgcaaagtgaaatatattgaattagaagtgatgaaagtagtattaattaaagttataat 26356267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 7167845 - 7167777
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagt 216  Q
    |||||||||||||||||| |||||| | | ||||||| |||| |||||||||||| ||||||| |||||    
T  7167845 tgtttttgttaagtattgatgcattttacattatcatgaatgcaaagtaaaatatgttgaattggaagt 7167777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 2658007 - 2657901
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||  ||||||||||||||||||  ||||    || ||| |||||||||| |||||||||||||| |||||  |||||||| |||||||| |    
T  2658007 tgattttaagtacttttgttaagtattggtgtcttctctagtaccattaatgtaaagtgaaatatattgaattggaagtgatgaaagtaatattaattag 2657908  T
Q  238 agttata 244  Q
    | |||||    
T  2657907 aattata 2657901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 7739529 - 7739591
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||| |||||||  | |||| |||||||||||||| || ||||||||||    
T  7739529 tgtttttgttaagtattgatgcattcaccattattataaatgtaaagtagaagatattgaatt 7739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 15351407 - 15351481
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||| ||| ||||||||||||||||||| || ||| |||||||||||||   ||  ||||||||||||||||||    
T  15351407 tattgatgcgttcttctttatcataaatgcaaggtagaatatattgaattgagagcggtgaaagtagtattaatt 15351481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 15355658 - 15355609
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||||  |||||| |||||| ||||||    
T  15355658 tattggtgcattcttctttatcataaatccaaagtagaatataatgaatt 15355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 9755164 - 9755220
Alignment:
Q  154 tgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||| |||||| |  ||||||||||||| |||| |||||||||||||    
T  9755164 tgttaagtattggtacattctccactatcataaatgtagagtagaatatattgaatt 9755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 30063953 - 30064057
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||| |||| ||||||||| ||| ||||| |  ||| ||||||| |||||  ||||||||||||| | |||  |||||||| |||||||| ||||    
T  30063953 ttttaagtgcttttattaagtatttgtgtattctccactattataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagt 30064052  T
Q  241 tataa 245  Q
    |||||    
T  30064053 tataa 30064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 34442169 - 34442134
Alignment:
Q  159 agtattggtgcattcttctttatcataaatgtaaag 194  Q
    |||||||||||||||||||||||||||||| |||||    
T  34442169 agtattggtgcattcttctttatcataaatataaag 34442134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 15325230 - 15325156
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||  |||||||||||| |||||| |||||| ||||||||| |||   ||| |||||| |||||||||||    
T  15325230 tattggtgtgttcttctttatcgtaaatgcaaagtagaatatattggattgagagtggtgaaactagtattaatt 15325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 16126302 - 16126240
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaag 215  Q
    |||| |||||||||||||||  |  |||||||||||| |||||| ||||||||||||| ||||    
T  16126302 ttgtaaagtattggtgcatttattcttatcataaatgcaaagtataatatattgaattggaag 16126240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 20383936 - 20383843
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||| || ||||| |||||| ||| || |||||| |||||| |||||  | |||||  |||||||| |||||||||||    
T  20383936 ttgtcaagtattggtgcattcctcattatcttaaatgaaaaatagaatata-tgaattggaagtacttaaagtgatattaattagagttataatt 20383843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 245
Target Start/End: Original strand, 35998079 - 35998225
Alignment:
Q  99 cagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaa 198  Q
    |||||||||||||||||||||||||||| ||        | ||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||    
T  35998079 cagattaagaaaagtgtataaatgaaagcgaacgaaaaataattttgagtgtctttatcaagtattggtacattcttctttatcataaatgtaaagtaaa 35998178  T
Q  199 atatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||   ||| |||||||||||||||||| |||||||||    
T  35998179 atatattgaattgagagtggtgaaagtagtattaattagagttataa 35998225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 39052856 - 39053009
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| |||||||||||||||||         || ||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  39052856 tttcacacagattaagaaaaatgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgcattcttctttatcataaatgta 39052955  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| |||||||||||||   ||| |||||||||||||||||| |||||||||    
T  39052956 aagtagaatatattgaattgagagtggtgaaagtagtattaattagagttataa 39053009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 10099687 - 10099835
Alignment:
Q  99 cagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaa 198  Q
    ||||||||||| |||||||||| ||||||||        |  |||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||| |    
T  10099687 cagattaagaagagtgtataaaggaaagagaaaaaaaaatagttttgagtgtattttttaagtattggtgcatttttctttatcataaatttaaagtaga 10099786  T
Q  199 atatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||||    
T  10099787 atatattgaattgggagttgtgaaagtagtattaattagagttataatt 10099835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 92 - 296
Target Start/End: Original strand, 29550682 - 29550886
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| |||||||| |||||||||       |  |||||||||  ||| |||||||||| ||  |  ||||||||||||||||||    
T  29550682 tttcacacagattaagaaaaatgtataaaggaaagagagagaaaaatagttttgagtgccttttttaagtattgatgtttcattctttatcataaatgta 29550781  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||        ||||||||||||||||  |||| |||||||| ||||    
T  29550782 aagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaggtaattaatgttgtattgaaaagtgaaatgggtcaa 29550881  T
Q  292 gattc 296  Q
    |||||    
T  29550882 gattc 29550886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 25149634 - 25149448
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||||||||| ||||| | ||    ||||||| |||||||||||||||||||||   ||||||||       |  |||||||||  ||| ||||||    
T  25149634 ccgtcccaatttaactgagttaattttctttttcacacagattaagaaaagtgtataacgaaaagagagagaaaaatagttttgagtgccttttttaagt 25149535  T
Q  162 attggtgcattcttcttt-atcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  25149534 attggtgcattcctcttttatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtagtattaattagagttataatt 25149448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 28279940 - 28279785
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||| ||||  |||||| ||||||||||| ||||    
T  28279940 ttttgagtgtctttgttaagtattggtgcatttttctttatcataaatataaagtagaatatatttaattggaagcagtgaaaatagtattaattagagt 28279841  T
Q  241 tataattnnnnnnnngtaattaatgttgtatcaaaaactgaaatggatcaagattc 296  Q
    |||||||        ||||||||||||||||  |||| |||||||  |||||||||    
T  28279840 tataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaagattc 28279785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 44633259 - 44633154
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||  |||| |||||||||||||||||| ||||    
T  44633259 ttttgagtgtctttgtcaagtattggtgcattcttctttatgataaatgtaaagtagaa-atattgaattgaaagtggtgaaagtagtattaattagagt 44633161  T
Q  241 tataatt 247  Q
    |||||||    
T  44633160 tataatt 44633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 48400586 - 48400734
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| ||||||||||||||||||       ||||||| | || |||| | |||||||| || ||||||||||||||||||||||    
T  48400586 tttcacacagattaagaaaaatgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataaatgta 48400685  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    ||||| |||||||||||||   ||||||||||||  |||||||| ||||    
T  48400686 aagtagaatatattgaattgagagttgtgaaagtgatattaattagagt 48400734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 55360278 - 55360458
Alignment:
Q  67 ccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattgg 166  Q
    |||||||||  |||| |||||| | ||| || ||||||||||||| |||||||| ||||||||        || |  ||||||| ||||| |||||||||    
T  55360278 ccaatttaaccgagtcagttgatcattttacacagattaagaaaaatgtataaacgaaagagaaagtaaaatggtggtgagtgtctttgtcaagtattgg 55360377  T
Q  167 tgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
     ||||||||||||||||||||||||||||| |||||||||||||   |||  |||||||| |||||||| |||||||||||    
T  55360378 cgcattcttctttatcataaatgtaaagtacaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 55360458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 247
Target Start/End: Original strand, 42051588 - 42051766
Alignment:
Q  69 aatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtg 168  Q
    ||||||| ||||  |||| | ||||||||  | ||||||||||||||||||||||||||||        || |||| ||||| |||   |||||||||||    
T  42051588 aatttaactgagctagtttaacttttcacataaattaagaaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtg 42051687  T
Q  169 cattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||| || || ||||| || ||||||||    
T  42051688 cattcttctttatcataaatgtaaagtagaatataatgaattggaagtggtgaaaataataataattagaattataatt 42051766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 18849775 - 18849867
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  18849775 ttgttaagtattggtgcattctccactatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtaatattaattagagttataa 18849867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 34790916 - 34791060
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgt-aaagtaaaat 200  Q
    ||||||||||||||||||||||||| |||       |||||||||||| |||| | ||||||| |||||||||||||||||||||| || |||||| |||    
T  34790916 attaagaaaagtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaaagtaaaagtagaat 34791015  T
Q  201 atattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||   |||  | || |||||||||||| |||||||||    
T  34791016 atattgaattgagagtgataaatgtagtattaattagagttataa 34791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 4354551 - 4354445
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||||||| |||| |||||||||| | |||||||||||||||||||  || |||||||| ||||   ||||||||||||||||||||||  |||    
T  4354551 ttttgagtgttttttttaaatattggtgcactattctttatcataaatgtaatttagaatatattaaattgagagttgtgaaagtagtattaattatagt 4354452  T
Q  241 tataatt 247  Q
    |||||||    
T  4354451 tataatt 4354445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 20964259 - 20964386
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    |||||||||||| ||||||||||       ||| |||| |||| ||| | || |||||||||||||||||||||| |||||| |||||| ||||||| ||    
T  20964259 aaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtctttatcaactattggtgcattcttctttatcgtaaatgcaaagtagaatatatcga 20964358  T
Q  208 atttgaagttgtgaaagtagtattaatt 235  Q
    ||| ||||| ||||||||||||||||||    
T  20964359 attggaagtggtgaaagtagtattaatt 20964386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 42132896 - 42132810
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||||| | |||||||||    
T  42132896 tattgatgcattcttctttatcataaatgcaaagtagaatatattgaattggaagtggtgaaagtaatattaattagtgttataatt 42132810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 41436636 - 41436478
Alignment:
Q  89 gcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    ||||||||| || |||||||||||||||||| ||| ||||||       || |||| |||| |||||||| ||||||||||||||| |  ||||||||||    
T  41436636 gcttttcacacatattaagaaaagtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaat 41436537  T
Q  189 gtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    | |||||| ||||| |||||||   | |  ||||||||||||||||| |||||||||||    
T  41436536 gcaaagtagaatattttgaattgcgaatgatgaaagtagtattaattagagttataatt 41436478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 37315941 - 37316076
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnn 255  Q
    |||| |||| ||||||| |||||||||||||||| |||||| ||||| ||||||| | ||| |||||||||||||||||| | |||||||||            
T  37315941 ttaactattagtgcatttttctttatcataaatgcaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaat 37316040  T
Q  256 gtaattaatgttgtatcaaaaactgaaatggatcaa 291  Q
    ||||||||| ||||||  |||| |||||||||||||    
T  37316041 gtaattaatattgtattgaaaagtgaaatggatcaa 37316076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 4357709 - 4357567
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| | |||||||||| |||||       ||||||| ||||||||||||||||||||||| |||||||  ||||||||||  |||  ||||||    
T  4357709 attaagaaaaatatataaatgaaggagagagaaagatgattttaagtgtttttgttaagtattggtggattcttcactatcataaatacaaa-aaaaata 4357611  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| | |||  ||||| ||||||||||| |||||||||    
T  4357610 tattgaattgggagtgatgaaaatagtattaattagagttataa 4357567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 224
Target Start/End: Complemental strand, 35029202 - 35029055
Alignment:
Q  77 tgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttc 176  Q
    ||||| |||||| | ||||||  |||||||||||||||||||||||||| ||||       |  ||| |||||| ||||| ||||||| || ||||||||    
T  35029202 tgagtcagttgaccatttcacatagattaagaaaagtgtataaatgaaaaagagagaaaaatagtttcgagtgtctttgtcaagtattagtacattcttc 35029103  T
Q  177 tttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaag 224  Q
    |||||||||||||||||||| |||| ||| |||| | ||| |||||||    
T  35029102 tttatcataaatgtaaagtagaataaattaaattaggagtggtgaaag 35029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 38319994 - 38319908
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||   |||  ||||||||||||||||| | |||||||||    
T  38319994 tattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttataatt 38319908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 307
Target Start/End: Complemental strand, 49401742 - 49401593
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataattnnnnnnnngt 257  Q
    |||||||| | |||| |||||||| |||||||||||||| ||||||||||||| ||| || ||||||| ||||||||| |||| ||||||        ||    
T  49401742 aagtattgatacattgttctttattataaatgtaaagtagaatatattgaattggaaattatgaaagtggtattaattagagtcataattgaagaaaagt 49401643  T
Q  258 aattaatgttgtatcaaaaactgaaatggatcaagattcctgagagaata 307  Q
    ||||||||||| ||  |||| | |||||| ||||||||| ||||| ||||    
T  49401642 aattaatgttgcattgaaaagtaaaatgggtcaagattcttgagacaata 49401593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 25902466 - 25902554
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagta 229  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||| ||||||  ||||||||||||| ||| | |||||| |||||    
T  25902466 ttttgagtgtttttgttaagtattagtgcattcttctttgttataaatataaagttgaatatattgaattggaaatggtgaaaatagta 25902554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 245
Target Start/End: Original strand, 54729452 - 54729591
Alignment:
Q  105 aagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatat 204  Q
    ||||||| ||||||||||||||||||       |  |||| ||||||||||||||||||| ||| ||||| |  ||||||||||| |||||  |||||||    
T  54729452 aagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataaatgcaaagtggaatatat 54729551  T
Q  205 tgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||| |||| ||  ||||||||||||||||| |||||||||    
T  54729552 tgaa-ttgaggtgatgaaagtagtattaattagagttataa 54729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 28330877 - 28330791
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||| |||| | | ||||||||||| | ||| ||||||||| |||||||| | |||||||||    
T  28330877 tattggtgcattcttctttatcataaatgcaaagcagattatattgaattgggagtggtgaaagtaatattaattagtgttataatt 28330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 32949853 - 32949947
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||| ||| | || |||||||||||| ||||||||||||||||||||||| |||||||||||||   ||| |||||| || ||||||||    
T  32949853 ttttgagtgtctttatcaactattggtgcatttttctttatcataaatgtaaagtagaatatattgaattgagagtagtgaaaataatattaatt 32949947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 247
Target Start/End: Complemental strand, 3505823 - 3505719
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagtt 241  Q
    ||||||||| |||||||| ||||| |||||| || |||||||||||||||||||| |||||||||||||   | | |||||||||  ||||||| |||||    
T  3505823 tttgagtgtctttgttaactattgatgcattttt-tttatcataaatgtaaagtagaatatattgaattgagattagtgaaagtatgattaattagagtt 3505725  T
Q  242 ataatt 247  Q
    ||||||    
T  3505724 ataatt 3505719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 30680393 - 30680511
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||||||||||||| ||| ||||       | ||||||||||| |||||  | |||||||| |||||||||||| |||||||||    
T  30680393 tttcacacatattaagaaaagtgtataaattaaatagagagaactataattttgagtgtctttgtcgaatattggtggattcttctttatgataaatgta 30680492  T
Q  192 aagtaaaatatattgaatt 210  Q
    ||||| |||||||| ||||    
T  30680493 aagtataatatattaaatt 30680511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 49306728 - 49306586
Alignment:
Q  103 ttaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    |||||| || ||||||||||||||||||       || |||| |||| | |||||||||||||||  ||||| |  ||||||||||| |||||  |||||    
T  49306728 ttaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaagtggaatat 49306629  T
Q  203 attgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||| | |||  ||||||||||||||||| |||||||||    
T  49306628 attgaattaggagtgatgaaagtagtattaattagagttataa 49306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 8759862 - 8759778
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| |||||| |||||||||||||||| |||||| ||||||||||||| | |||||||||| || |||||||| | |||||||    
T  8759862 tattgatgcatttttctttatcataaatgcaaagtagaatatattgaattgggagttgtgaaattattattaattagtgttataa 8759778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 27977253 - 27977145
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| ||||||||||||||||||||||||||||| |  ||| ||||||| |||||  |||||||||||||   |||  |||||||  |||||||| |    
T  27977253 tgattttaagtgtttttgttaagtattggtgcattctccactattataaatgcaaagtggaatatattgaattgagagtgatgaaagtgatattaattag 27977154  T
Q  238 agttataat 246  Q
    |||||||||    
T  27977153 agttataat 27977145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 39979871 - 39979779
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||||||| |  |||||||||||||||||  ||||||||||||| ||| |  |||||||| |||||||| |||||||||    
T  39979871 ttgttaagtatcggtgcattctccactatcataaatgtaaagtggaatatattgaattggaaatgatgaaagtaatattaattagagttataa 39979779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 13719911 - 13719811
Alignment:
Q  108 aaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattga 207  Q
    ||||||||||||||||||||||        ||  ||||||||| ||||||||||| || || ||| ||||||||||||||||||||||| ||||||||||    
T  13719911 aaaagtgtataaatgaaagagaaagaaaaatgggtttgagtgtctttgttaagtaatgatgtattattctttatcataaatgtaaagtataatatattga 13719812  T
Q  208 a 208  Q
    |    
T  13719811 a 13719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 22872403 - 22872498
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||||||||||| | |||||||||||| |||||  |||||||||||||   |||  |||||||| |||||||| |||||||||||    
T  22872403 tttgtcaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 22872498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 47277705 - 47277792
Alignment:
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||   |||  | |||||||||||||||  ||||||||||    
T  47277705 gtatttgtacatttttctttatcataaatgtaaagtaaaatatattgaattgagagtgattaaagtagtattaattatagttataatt 47277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 47846982 - 47846896
Alignment:
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| ||||||||| || ||||||||||| ||||| |||||||||||||| | |||  ||||||||||||||||| |||||||||||    
T  47846982 gtatttgtgcattct-ctatatcataaatgcaaagtgaaatatattgaattaggagtgatgaaagtagtattaattagagttataatt 47846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 1796284 - 1796350
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||  ||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  1796284 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtataaattagagttataa 1796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 17237146 - 17237040
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||| |||||||||||||| ||| ||||||   ||||||||||| |||||  |||||||||||||  |||   ||||||||||||||||| ||||    
T  17237146 ttttaagtgattttgttaagtattagtggattctttactatcataaatgcaaagtggaatatattgaattgaaagcgatgaaagtagtattaattagagt 17237047  T
Q  241 tataatt 247  Q
    |||||||    
T  17237046 tataatt 17237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 36047124 - 36047198
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||   ||| ||||||||| ||||||||    
T  36047124 tattagtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaatt 36047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 28974458 - 28974316
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||||||| || |||||||||||||| |||       || |||| |||||| |||||||||||||||||||||| | |||||||||||| |    
T  28974458 tttcacacatattaagacaaatgtataaatgaaagggagataaaagtggttttaagtgttgttgttaagtattggtgcattctccattatcataaatgca 28974359  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaat 234  Q
    |||   ||||||||||| |   |||  ||||||||||||||||    
T  28974358 aaggggaatatattgaaatgagagtgatgaaagtagtattaat 28974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 37787063 - 37786970
Alignment:
Q  142 tttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||| ||||| ||||| || |||||||||||||| |||||||||||| || |||||||| ||||  |||| |||||| || ||||||||    
T  37787063 tttgagtgtgtttgtcaagtagtgatgcattcttctttaccataaatgtaaaatagaatatattaaattgaaagtggtgaaaataatattaatt 37786970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 51572246 - 51572338
Alignment:
Q  155 gttaagtattggtgcattcttctt-tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| ||||||||||||| ||||  |||||||||||||||||  ||||||||||||| |||||  | ||||||||||||||| |||||||||||    
T  51572246 gttatgtattggtgcatt-ttctactatcataaatgtaaagtgtaatatattgaattggaagtgataaaagtagtattaattagagttataatt 51572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 4360412 - 4360515
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt-tgaagttgtgaaagtagtattaatttgag 239  Q
    |||| |||| |||||||||||||||||||||||| |  || |||||||| |||||  ||||||||||||| |||| |  ||||||||||||||||| |||    
T  4360412 ttttaagtgcttttgttaagtattggtgcattctccactagcataaatgcaaagtggaatatattgaattgtgaa-tgatgaaagtagtattaattagag 4360510  T
Q  240 ttata 244  Q
    |||||    
T  4360511 ttata 4360515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 47787863 - 47787955
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||| || ||||| ||||  ||||||||||||||| |||||||||| |||||  || |  ||||||||||||||||| |||||||||    
T  47787863 ttgttaagtactgatgcatccttcactatcataaatgtaaaataaaatatatggaattgaaaatgatgaaagtagtattaattagagttataa 47787955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 49448983 - 49448838
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| ||||||| |||| |||||       || |||| |||| | |||| ||||||| |||||||||   |||||||||||| |||||| ||||    
T  49448983 attaagaaaaatgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatcataaatgcaaagtataata 49448884  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||   | |  ||||||||||||||||| |||||||||||    
T  49448883 tattgaattgagaatgatgaaagtagtattaattagagttataatt 49448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 54217423 - 54217351
Alignment:
Q  163 ttggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||| ||||||||||||||||| || |||||| ||||||||||||| | ||| |||||||| |||||||||    
T  54217423 ttggtgtattcttctttatcataactgcaaagtataatatattgaattgggagtggtgaaagtggtattaatt 54217351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 16493253 - 16493403
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||||||| || ||||||||| ||||||||       || |||| ||||||||||| ||||||| |||||||||    |||||||| || |    
T  16493253 tttcacacatattaagataaatgtataaataaaagagagaaaaaaatggttttaagtgtttttgt-aagtatttgtgcattctcagctatcataa-tgca 16493350  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    ||||  ||||||||||||| |||||| |||||||| |||||||| ||||||||    
T  16493351 aagtggaatatattgaattggaagttatgaaagtaatattaattagagttata 16493403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 3686104 - 3686010
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||||| |  ||| ||||||| |||||  |||||||||||||   |||  |||||||| |||||||| |||||||||    
T  3686104 ttttgttaagtattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 3686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 38977080 - 38976990
Alignment:
Q  156 ttaagtattggtgcatt-cttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||| || |  |||||||||||||||||  |||||||||||||  || |  ||||||||||||||||| |||||||||    
T  38977080 ttaagtattggtgcatttctcccctatcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 38976990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 41203879 - 41203736
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| |||||||||||| ||||        || |||| |||| | ||||||||||||| ||||||||||  || |||||||  |||||  ||||    
T  41203879 attaagaaaaatgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactaccataaatacaaagtggaata 41203780  T
Q  202 tattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||  ||||  | ||||||||||||||| |||||||||    
T  41203779 tattgaattgaaagtgataaaagtagtattaattagagttataa 41203736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 46958813 - 46958719
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||| ||||||||| |  |||||||||| | |||||| |||||||||||||   |||  | |||||||||||||||||| ||||||||    
T  46958813 ttgttaagtatcggtgcattccttcttatcataaacgcaaagtagaatatattgaattgagagtgattaaagtagtattaatttgaattataatt 46958719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 55293579 - 55293509
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagta-aaatatattgaatt 210  Q
    |||||||||| |||| |||| |||||||||||||| |||||||||||| ||||||| || |||||||||||    
T  55293579 ttttgagtgtctttgataagaattggtgcattcttgtttatcataaatataaagtagaattatattgaatt 55293509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 8295181 - 8295030
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| ||||||||||||||||||       |  |||| |||  | ||| |||||||||||||||||| |  ||||||||||| |    
T  8295181 tttcacacaaattaagaaaaatgtataaatgaaagagagagaaaaattgttttaagtcctcttgataagtattggtgcattctccactatcataaatgca 8295082  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    | ||| ||||||||||||| | ||   |||||||||||| |||| |||||||||    
T  8295081 atgtataatatattgaattgggag--atgaaagtagtataaattagagttataa 8295030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 37309794 - 37309697
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||| ||||||||||||| ||||||||    ||||||||||| ||||| ||||||||||||||   |||  |||||||| |||||||| |||||||||    
T  37309794 tgttcttgttaagtattgatgcattctctactatcataaatgcaaagttaaatatattgaattgagagtgatgaaagtaatattaattagagttataa 37309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 38614979 - 38615036
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||||||||| ||  |||||||||||| ||| ||||||||||||||||    
T  38614979 ttgttaagtattggtgcattttttcttatcataaatgcaaaataaaatatattgaatt 38615036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 42024217 - 42024309
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  ||||| |  ||| ||||||| |||||  ||||||||||||| |||||  |||||||||||||||||  ||||||||    
T  42024217 ttgttaagtattggtctattctccactattataaatgcaaagtggaatatattgaattggaagtgatgaaagtagtattaattatagttataa 42024309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 44020782 - 44020870
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||| | |  |||||||||||||||||  || |||||||||| ||| |  ||||||||||||| ||| |||||||||    
T  44020782 taagtattggtgcattatccactatcataaatgtaaagtggaacatattgaattagaaatgatgaaagtagtattgattagagttataa 44020870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 52677032 - 52677104
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| |||| | ||| ||||||||| ||||||  || |||||||||||||||||||||||||||| ||||    
T  52677032 tgattttaagtgctcttgataagtattgatgcatttatcattatcataaatgtaaagtaaaatatattaaatt 52677104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 11583895 - 11583969
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||| ||||   |||  |||||||| ||||||||    
T  11583895 tattggtgtattattctttattataaatgtaaagtaaaatatattaaattgagagtgatgaaagtaatattaatt 11583969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 19688421 - 19688343
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagt 216  Q
    ||||||||||||||||||||||||||| |||||||| |  | |  | ||||| |||||||||||| ||||||| |||||    
T  19688421 tgattttgagtgtttttgttaagtatttgtgcattcattatcacaaaaaatgcaaagtaaaatatgttgaattggaagt 19688343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 35909538 - 35909641
Alignment:
Q  102 attaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    |||||||||| |||||||||||| || ||       | ||||| ||||| ||||||||||||||||||||| | |  ||| ||||||||||||| |||||    
T  35909538 attaagaaaaatgtataaatgaatgaaagataaaaataattttaagtgtatttgttaagtattggtgcattttccactattataaatgtaaagtgaaata 35909637  T
Q  202 tatt 205  Q
    ||||    
T  35909638 tatt 35909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 38160156 - 38160262
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||| ||||| || ||||| |||||||| | |||||||||||  ||||| ||||||||||||||   |||  | |||||| |||||||| ||||    
T  38160156 ttttaagtgtctttgtcaaatattgatgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagtaatattaattagagt 38160255  T
Q  241 tataatt 247  Q
    |||||||    
T  38160256 tataatt 38160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 40020952 - 40021058
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||| ||||||||| |||||||||||||||   | |||||||| ||| |||  | |||||||| |||| | |||  ||| ||||||||||||| ||||    
T  40020952 ttttgaatgtttttgtcaagtattggtgcatttaccattatcatagatgcaaaaaagaatatattaaattgggagtgatgacagtagtattaattagagt 40021051  T
Q  241 tataatt 247  Q
    |||||||    
T  40021052 tataatt 40021058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 49218807 - 49218880
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||| |||||||||||||  |||||| |||||||||||||   ||| ||||||||| ||||||||    
T  49218807 tattggtgcattct-ctttatcataaattcaaagtataatatattgaattgagagtggtgaaagtaatattaatt 49218880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 5291767 - 5291706
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    ||||||||| ||| || ||||||| ||||||| ||||||||||||||||||| ||| |||||    
T  5291767 ttttgagtgctttagtcaagtattagtgcattattctttatcataaatgtaatgtagaatat 5291706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 22020551 - 22020620
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||| |||||||||||||   | | |||||||||||| ||||| |||||||||||    
T  22020551 ttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtaataattagagttataatt 22020620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 33093464 - 33093532
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||| || ||| ||| ||| | |||||||||||||||||||||||||  ||||||||||||    
T  33093464 ttttgagtgtttt-gtcaagaattagtgaaatcttctttatcataaatgtaaagtaggatatattgaatt 33093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 43421383 - 43421318
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagta 226  Q
    ||||||| |||||| |  ||||||||||| ||| | |||||||||||||| |||||||||||||||    
T  43421383 tattggtacattctccactatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagta 43421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 48740604 - 48740519
Alignment:
Q  160 gtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||| |  |||||||||||||||||  |||||||||||||  || |  | |||||| |||||||| |||||||||    
T  48740604 gtattggtgcattctccactatcataaatgtaaagtggaatatattgaattaaaaatgataaaagtaatattaattagagttataa 48740519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 51527501 - 51527452
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||| |  ||||||||||||||||| ||||||||||||||    
T  51527501 tattggtgcattctccactatcataaatgtaaagtgaaatatattgaatt 51527452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 53848729 - 53848680
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||| || ||||||||||||| |||||| |||||||||||||    
T  53848729 tattggtgcattattatttatcataaatgcaaagtagaatatattgaatt 53848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 31862880 - 31862793
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| |||| |||||  ||||||| ||| |||||  ||||||||      |||||||||||||||||||||||| |||||||||    
T  31862880 ttgttaagtattgatgcactcttcactatcatagatgcaaagtggaatatatta-----gaagttgtgaaagtagtattaattagagttataa 31862793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 49812320 - 49812228
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||| | |  |||||||||||||||||  ||||||||| ||| | |    ||||| ||||||||||| |||||||||    
T  49812320 ttgttaagtattggtgcattatccactatcataaatgtaaagtggaatatattgtattgggaaagatgaaaatagtattaattagagttataa 49812228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 12619754 - 12619687
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||  ||| | ||||||||||||||| ||||  ||||||||||||||||| || ||||||    
T  12619754 ttatcataaatacaaaatgaaatatattgaatttaaagtgatgaaagtagtattaattagaattataa 12619687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 25125117 - 25125148
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaat 209  Q
    ||||||||||||||||||||||||||||||||    
T  25125117 ttatcataaatgtaaagtaaaatatattgaat 25125148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 29815158 - 29815205
Alignment:
Q  198 aatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||||||||    
T  29815158 aatatattgaattggaagtggtgaaagtaatattaattagagttataa 29815205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 42185797 - 42185904
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| | |||||||||||||||  ||| | |  ||||||||||  || || ||||||||||||||   |||  ||||||||||||||||| |    
T  42185797 tgattttaagtgctcttgttaagtattggtctattatccactatcataaatacaaggtgaaatatattgaattgagagtgatgaaagtagtattaattag 42185896  T
Q  238 agttataa 245  Q
    ||||||||    
T  42185897 agttataa 42185904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 41710186 - 41710252
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||  ||||||||||||| | |||  |||||||| |||||||| |||||||||    
T  41710186 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 41710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 9093778 - 9093835
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||| ||||||||| |  |||||||||||||||||  |||||||| ||||    
T  9093778 ttgttaagtatttgtgcattctccactatcataaatgtaaagtggaatatattaaatt 9093835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 20294101 - 20294012
Alignment:
Q  158 aagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| ||||||  |||| |||||| ||  |||||| ||||||||||||||| | | ||||||  ||||| |||| |||||||||||    
T  20294101 aagtattgatgcatttctcttcatcatacatacaaagtataatatattgaatttgtaatggtgaaatgagtataaattagagttataatt 20294012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 21954439 - 21954503
Alignment:
Q  146 agtgtttttgttaagtattggtgcatt-cttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||| ||||| | |||||| |||||| |||||| |||||||||||||||||||||||| ||||||    
T  21954439 agtgtctttgtcatgtattgatgcatttcttctt-atcataaatgtaaagtaaaatatactgaatt 21954503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 29136802 - 29136899
Alignment:
Q  150 tttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||| |||||  |||||||||  |||||||||||||| |||||  || |||||||||||| |||    ||| || |||||||| |||||||||||    
T  29136802 tttttgtcaagtacgggtgcattcacctttatcataaatgcaaagtggaagatattgaatttggagtgactaaaatattattaattagagttataatt 29136899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 50328087 - 50328144
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||| ||||||||||||||||  |  ||||||||||| ||||| ||||||||||||||    
T  50328087 ttgtcaagtattggtgcattcaccactatcataaatgcaaagtgaaatatattgaatt 50328144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 5357822 - 5357928
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||| |||||||| ||||    
T  5357822 ttttgagtgtctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatattaattagagt 5357921  T
Q  241 tataatt 247  Q
    |||||||    
T  5357922 tataatt 5357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 25108676 - 25108582
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  25108676 ttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaatt 25108582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 25167768 - 25167674
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  25167768 ttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaatt 25167674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 25111153 - 25111247
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  25111153 ttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaatt 25111247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 25170244 - 25170338
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  25170244 ttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaatt 25170338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 36006851 - 36007003
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| ||||||||||||| ||||||||| ||||||||       || |||| ||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  36006851 tttcacacagattaagaaaaatgtataaataaaagagagaaaa---tggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaatgta 36006947  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||| |||||| ||||| |||||| || |||||||| |||||||||||    
T  36006948 aagtagaatatactgaattggaagtggtgaaaataatattaattagagttataatt 36007003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 16926096 - 16926200
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||||||||  || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| ||||||||    
T  16926096 ttttgagtgccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaatatattgaattggaagttgtgaaagt-gtatt-atttgagt 16926193  T
Q  241 tataatt 247  Q
    |||||||    
T  16926194 tataatt 16926200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 245
Target Start/End: Original strand, 35646043 - 35646198
Alignment:
Q  90 cttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatg 189  Q
    |||||||| || ||||||| || | |||||||||| |||||       ||||||| |||| | |||||||||||||||||||||| |  |||||||||||    
T  35646043 cttttcacacatattaagacaaatatataaatgaatgagagagaaaaatgattttaagtgatcttgttaagtattggtgcattctccactatcataaatg 35646142  T
Q  190 taaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     |||||  ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  35646143 caaagtggaatatattgaattagaagttgtgaaagtagtattaattagagttataa 35646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 4044404 - 4044576
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||||||||||||||| | ||     |||||| ||||||||||||||||||||||||||| |||         |||||||| || |||| | ||||    
T  4044404 ccgtcccaatttaattgagtcattttttgatttcacacagattaagaaaagtgtataaatgaaa-agaaaaaaaaaagattttgaatgcttttatcaagt 4044502  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |  || |||||| || ||||||||    
T  4044503 attggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggtgtggtgaaaatattattaatt 4044576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 11099433 - 11099586
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| ||||||||||||||||||       |  |||| ||||||||||||||||||||||||||||| |  ||||||||||  |    
T  11099433 tttcacacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataaataca 11099532  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||  ||||||||||||| | |||  ||||||||||||||||| |||||||||    
T  11099533 aagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataa 11099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 10044771 - 10044665
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttga-agttgtgaaagtagtattaatttgag 239  Q
    |||||||||| ||| | |||||||| ||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||| |||    
T  10044771 ttttgagtgtatttttcaagtattgatgcattcttttttatcataaatgtaaagtaaagtatattga-tttgagagttgtgaaagtaatattaattagag 10044673  T
Q  240 ttataatt 247  Q
    ||||||||    
T  10044672 ttataatt 10044665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 16883936 - 16884042
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    ||||||||||| |||||||| ||| ||||||||    ||||||||||||||||||||||||||||||||| |  || |||||||||||||||||| ||||    
T  16883936 ttttgagtgttcttgttaagcatttgtgcattcactattatcataaatgtaaagtaaaatatattgaattaggggtggtgaaagtagtattaattagagt 16884035  T
Q  241 tataatt 247  Q
    |||||||    
T  16884036 tataatt 16884042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 36469050 - 36469205
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||||||| ||||        ||||| | ||||||||||||| ||||||||||||||| |  ||||||||||| |    
T  36469050 tttcacacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtattggtgcattctccactatcataaatgca 36469149  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||| |||||||||||||  ||||  ||||||||||||||||| || ||||||||    
T  36469150 aagtataatatattgaattaaaagtgatgaaagtagtattaattagaattataatt 36469205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 100 - 245
Target Start/End: Complemental strand, 6610981 - 6610836
Alignment:
Q  100 agattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaa 199  Q
    |||||||||||| ||||| |||||| |||||       ||| ||| ||||||||| ||||||||||||||||||| |  ||||||||||||||||| |||    
T  6610981 agattaagaaaaatgtatcaatgaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcattctccactatcataaatgtaaagtgaaa 6610882  T
Q  200 tatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| | |||  |||||||| ||||||||  ||||||||    
T  6610881 tatattgaattcggagtgatgaaagtaatattaattaaagttataa 6610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 8369713 - 8369805
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||||||| |||||  |||||||||||||  ||||||||||||||||||||||| |||||||||    
T  8369713 ttgttaagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 8369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 8692823 - 8692927
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||||| |||||||||||||||||||||| |  ||||||||||| ||| | ||||||||| |||| ||||||||||||||| |||||||| ||||    
T  8692823 ttttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaaatgaaatatattaaattggaagttgtgaaagtaatattaattagagt 8692922  T
Q  241 tataa 245  Q
    |||||    
T  8692923 tataa 8692927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 43525644 - 43525475
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||| ||||| ||||  ||||||||||| ||| |||||||||||||||||||||| |||||||||       ||||||||||||         |||    
T  43525644 ccgtcccagtttaaatgaggtagttgagctttccacacagattaagaaaagtgtataaacgaaagagagaaaaa--tgattttgagtg---------agt 43525556  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
        |||||||||| |||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||| |||||||||||    
T  43525555 ----gtgcattctt-tttatcataaatgtaaagtataatatgttgaattggaagtggtgaaagtagtattaattagagttataatt 43525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 42818985 - 42818901
Alignment:
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  | ||| |||||| ||||||||||| |||||||||||    
T  42818985 attggtgcattcttctttatcataaatgtaaagtagaatatattgaatgag-agtggtgaaaatagtattaattagagttataatt 42818901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 42575594 - 42575747
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || ||||||| || |||||||||||| |||||       || |||| |||| | ||| |||||||||||| ||||| |  ||||||||||| |    
T  42575594 tttcacacatattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgctcttggtaagtattggtgtattctccactatcataaatgca 42575693  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||  ||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  42575694 aagtggaatatattgaattggaagttgtgaaagtagtattaattaaagttataa 42575747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 206
Target Start/End: Complemental strand, 35968902 - 35968758
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagt 161  Q
    |||||||||||||| ||||  |||| ||||||| |  |||||||| ||||||||||||||||||||||        |  |||||||||| ||||| ||||    
T  35968902 ccgtcccaatttaactgagctagtttagctttttatacagattaaaaaaagtgtataaatgaaagagaaagaaaaatagttttgagtgtctttgtcaagt 35968803  T
Q  162 attggtgcattcttctttatcataaatgtaaagtaaaatatattg 206  Q
    ||| || ||||||||||||| |||||| ||||||| |||||||||    
T  35968802 attagtacattcttctttattataaatataaagtagaatatattg 35968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 39060427 - 39060513
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtag 227  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||| |||||| | ||||||| ||| ||||| ||||||||||    
T  39060427 ttttgagtgcatttgttaagtattggtccattcttctttatcataaatgcaaagtagactatattgtattggaagtggtgaaagtag 39060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 36446644 - 36446786
Alignment:
Q  93 ttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaa 192  Q
    ||||| || |||||||||| |||||||||||| ||||        ||||| | ||||||||||||| ||||| ||||||||| |  ||||||||||| ||    
T  36446644 ttcacacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatttgtgcattctccactatcataaatgcaa 36446743  T
Q  193 agtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||| |||||||||||||  ||||  |||||||||||||||||    
T  36446744 agtataatatattgaattgaaagtgatgaaagtagtattaatt 36446786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 33988303 - 33988199
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| ||||||||||||||||||||||| ||||| |  |||||||||||||||||  ||||||||||||| | |||  |||||||| ||| |||| ||||    
T  33988303 ttttaagtgtttttgttaagtattggtgtattctccactatcataaatgtaaagtggaatatattgaattgggagtaatgaaagtaatatgaattagagt 33988204  T
Q  241 tataa 245  Q
    |||||    
T  33988203 tataa 33988199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 792079 - 791985
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||||   ||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||   ||| ||||||||||||||||||    
T  792079 tgattttgagtgtt---gttaagtattggtgcattcctctttattataaatgcaaaatagaatatattgaattatgagtggtgaaagtagtattaatt 791985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 15898279 - 15898188
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||   ||| ||||||||| |||||||| | |||||||||    
T  15898279 ttaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataatt 15898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 22582874 - 22582980
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| |||| | |||||||||| || |||||||| |  ||||||||||| |||||  || |||||||||| |||||||||||||||||||||||| |    
T  22582874 tgattttaagtgctcttgttaagtaatgatgcattctccactatcataaatgcaaagtggaa-atattgaattggaagttgtgaaagtagtattaattag 22582972  T
Q  238 agttataa 245  Q
    ||||||||    
T  22582973 agttataa 22582980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 19889574 - 19889644
Alignment:
Q  177 tttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||||| |||||||| |||||||||||    
T  19889574 tttatcataaatgtaaagtagaatatattgaattgaaagtggtgaaagtaatattaattagagttataatt 19889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 32539765 - 32539659
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagt 240  Q
    |||| |||| |||| ||| ||||||||||||||| |  ||||||||||||||| ||||||||||| |||  |||||  ||||| ||||||||||| ||||    
T  32539765 ttttaagtgcttttattatgtattggtgcattctccactatcataaatgtaaaataaaatatattaaatcggaagtgatgaaaatagtattaattagagt 32539666  T
Q  241 tataatt 247  Q
    |||||||    
T  32539665 tataatt 32539659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 39008193 - 39008128
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  39008193 tatcataaatgtaaagtgaaatatattgaattggaagtt-tgaaagtagtattaattagagttataa 39008128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 39183583 - 39183738
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| ||||||||||||| ||||       ||||||| |||| ||| ||||||||||| || ||||| |  ||||||||||| |    
T  39183583 tttcacacatattaagaaaaatgtataaatgaaaaagagataaaaatgattttaagtgctttcgttaagtattgatgaattctccactatcataaatgca 39183682  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||  |||||||||||||   |||  |||||||| |||||||| |||||||||||    
T  39183683 aagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 39183738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 15254871 - 15254762
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttg 237  Q
    ||||||| ||||||||||||| ||||| ||||||||| |  |||||| |||| ||| || |||||||||||||  ||||  |||||||| |||||||| |    
T  15254871 tgattttaagtgtttttgttatgtattagtgcattctccgctatcattaatgcaaattagaatatattgaattgaaagtgatgaaagtaatattaattag 15254772  T
Q  238 agttataatt 247  Q
    ||||||||||    
T  15254771 agttataatt 15254762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 30437744 - 30437852
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagt--agtattaatttga 238  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| |||| |||  ||  |||||  |||||||  | |||||||| ||    
T  30437744 ttttgagtgtttttgttaattattggtccattattctttatcataaatgtaaagtagaatagattatatcggaagtgatgaaagtaaaatattaattaga 30437843  T
Q  239 gttataatt 247  Q
    |||||||||    
T  30437844 gttataatt 30437852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 39060984 - 39061053
Alignment:
Q  166 gtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| | ||| ||||||||| ||||||||    
T  39060984 gtgcattcttctttatcataaatgcaaagtagaatatattgaattaggagtggtgaaagtaatattaatt 39061053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5147498 - 5147570
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    |||||||||||||  || | || ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5147498 tgattttgagtgtccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 7613798 - 7613706
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||| ||| |  | |||||| ||||||||  ||||||||    
T  7613798 ttgttaagtattggtgcattctccactatcataaatgtaaagtgaaatatattgaattggaaatgataaaagtaatattaattatagttataa 7613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 5073038 - 5072947
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||| ||||||| ||  ||||||||||||||||||||||||||||||||| | ||   || |||||||||||||| |||||||||||    
T  5073038 ttaaatatttgtgcattttttcttatcataaatgtaaagtaaaatatattgaattgggagcaatggaagtagtattaattagagttataatt 5072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 38978992 - 38978905
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttat 243  Q
    |||| ||||||| ||||| ||||||||||||||| |||||| |||||||| ||||   |||||||| ||||||||||||| |||||||    
T  38978992 ttaactattggtacattcctctttatcataaatgcaaagtagaatatattaaattgagagttgtgatagtagtattaattagagttat 38978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 7871396 - 7871323
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||| || ||| ||| ||||||||||||||||||    
T  7871396 tattggtgtatttttctttatcataaatgtaaagtagaatatatt-aaattggagtggtgaaagtagtattaatt 7871323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 13016389 - 13016462
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||| | ||| ||||||||| ||||||||    
T  13016389 tattggtgcattct-ctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtaatattaatt 13016462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 16954949 - 16954880
Alignment:
Q  159 agtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagta 229  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||| ||||||| ||||||    
T  16954949 agtattggtgcattctt-tttatcataaatgtaaaatagaatatattgaattggaaattgtgaatgtagta 16954880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 6735377 - 6735465
Alignment:
Q  156 ttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttata 244  Q
    ||||||||| ||||||||| |  ||||||||||| |||||  |||||||| ||||||||||  |||||||| |||||||| ||||||||    
T  6735377 ttaagtatttgtgcattctccactatcataaatgcaaagtggaatatattaaatttgaagtgatgaaagtaatattaattagagttata 6735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 17741134 - 17741284
Alignment:
Q  99 cagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattc-ttctttatcataaatgtaaagtaa 197  Q
    |||||||| |||||||||||||||||||||||       |  |||||||||  |||||||||||||| ||||||| || ||||||||||||||||||||     
T  17741134 cagattaaaaaaagtgtataaatgaaagagagaaaaa--tagttttgagtgcctttgttaagtattgatgcattctttttttatcataaatgtaaagtat 17741231  T
Q  198 aata---tattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||   |||||||||   |||  |||||||| ||||||||  ||||||||||    
T  17741232 aatatagtattgaattgagagtgatgaaagtaatattaattatagttataatt 17741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 39212567 - 39212662
Alignment:
Q  153 ttgttaagtattggtgcattcttct-ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| ||||||||||||||||  |  |||||||||||| |||||| ||||||||||||| | ||   ||||||||||||||||| |||||||||||    
T  39212567 ttgtcaagtattggtgcattcccccattatcataaatgcaaagtagaatatattgaattgggagcgatgaaagtagtattaattagagttataatt 39212662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 13087767 - 13087840
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||   ||| ||||||||| ||||||||    
T  13087767 tattggtgcattct-ctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaatt 13087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 31090387 - 31090313
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| |||||   |||  |||||||||||||||||    
T  31090387 tattggtgcattcttctttatcataaacgcaaagtagaatatatggaattgagagtgttgaaagtagtattaatt 31090313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 35988725 - 35988631
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||||||||||||||| |  |||||||||||| |||||  ||||||||||||| | ||| ||||||||  ||||||||  ||||||||||    
T  35988725 ttgtcaagtattggtgcattcattcttatcataaatgcaaagttgaatatattgaattgggagtggtgaaagtgatattaattaaagttataatt 35988631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 42211398 - 42211332
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| ||||| ||||||||||||||   |||  |||||||||||||||||||||||||||    
T  42211398 tatcataaatgcaaagtgaaatatattgaattgtgagtgatgaaagtagtattaatttgagttataa 42211332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 72128 - 72216
Alignment:
Q  159 agtattggtgca-ttcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||| |||||||||||| |||||| |||||||| |||| | |||  ||||||||||||||||| || ||||||||    
T  72128 agtattggtgcatttcttc-ttatcataaatgcaaagtagaatatattaaattaggagtgatgaaagtagtattaattagatttataatt 72216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 6629349 - 6629504
Alignment:
Q  90 cttttcactcagattaagaaaa-gtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaat 188  Q
    |||||||| || |||||||||| |||||||||||||||||||       |  |||||||||| || || |||||||||||||||||| ||||| ||||||    
T  6629349 cttttcacacatattaagaaaaagtgtataaatgaaagagagaaaa---tagttttgagtgtctt-gtcaagtattggtgcattcttttttattataaat 6629444  T
Q  189 gtaaagt-aaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    | |||||  ||||||||| |||| | |||  ||||||||  ||||||| |||||||||||    
T  6629445 gcaaagtggaaatatattaaattgggagtgatgaaagtaaaattaattagagttataatt 6629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 20189984 - 20189891
Alignment:
Q  152 tttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| || |||||||| | ||||||||||||||||||  |||||||||||||   | |  |||||||| |||||||| |||||||||    
T  20189984 tttgttaagtactgatgcattctccattatcataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataa 20189891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 858426 - 858334
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||| ||||||| |||||| | |||||||||||| ||| | ||||||||| ||||   |||  ||||||||||||||||| |||||||||    
T  858426 ttgttaaatattggtacattctccattatcataaatgcaaaatgaaatatatttaattgagagtgatgaaagtagtattaattagagttataa 858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 3725338 - 3725185
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||| ||| |||||       || |||| |||| | |||||||||||||||||||||| |  ||||||||||| |    
T  3725338 tttcacacatattaagaaaaatgtataaaggaaggagagagaaaaatggttttaagtgctattgttaagtattggtgcattctccactatcataaatgca 3725239  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
     |||  ||||||| |||||   |||  |||||||| |||||||| |||||||||    
T  3725238 tagtggaatatatcgaattgtgagtgatgaaagtaatattaattagagttataa 3725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 25814455 - 25814363
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||| |||| | |  ||||||||||||||||| |||||||||||||| ||| |  ||| |||| ||||||||  ||||||||    
T  25814455 ttgttaagtattggtacattatccactatcataaatgtaaagtgaaatatattgaattggaaatgatgagagtaatattaattaaagttataa 25814363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 35334569 - 35334635
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |||||  ||||||||||||| | |||  ||||||||||||||||| |||||||||    
T  35334569 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataa 35334635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 6173022 - 6173091
Alignment:
Q  178 ttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| |||||| |||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  6173022 ttatcataaatgcaaagtataatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 6173091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 16283602 - 16283698
Alignment:
Q  151 ttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||| |||||||||||||||    ||||||||||| |||||  |||||||||||||   |||  ||||||||| || |||| |||||||||||    
T  16283602 ttttgttatgtattggtgcattctcaactatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagcatcaattagagttataatt 16283698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 17242971 - 17243063
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||  |||||    ||||||||||| |||||  |||||||||||||   |||  ||||||||||||||||| |||||||||    
T  17242971 ttgttaagtattggtctattctctactatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaattagagttataa 17243063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 17699398 - 17699330
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||||| ||| |||||||||||||   |||  |||||||||||||||||  ||||||||||    
T  17699398 tatcataaatgtaaggtataatatattgaattgagagtaatgaaagtagtattaattaaagttataatt 17699330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 25344763 - 25344837
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    |||| ||||||||  | ||||||||||||||||||| |||||||||||||   | |  |||||||||||||||||    
T  25344763 tattagtgcattcaccattatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaatt 25344837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 41268429 - 41268335
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||||||||||| ||| ||| | | |||||||| ||| ||| ||  |||||||||||||| |||  |||||||| ||||||||  ||||||||||    
T  41268429 ttgttaagtatttgtgtattgtccattatcatatatgcaaattatgatatattgaatttggagtgatgaaagtaatattaattatagttataatt 41268335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 13135833 - 13135752
Alignment:
Q  164 tggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||| |  ||||||||||| |||||  ||||||||||||| | |||  ||||||||||| |||||  ||||||||    
T  13135833 tggtgcattctccactatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtagtaattaaagttataa 13135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 20364641 - 20364580
Alignment:
Q  141 ttttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatat 202  Q
    ||||||||| ||| || ||||||| ||||| | |||||||| |||||||||||||| |||||    
T  20364641 ttttgagtgctttagtcaagtattagtgcactattctttattataaatgtaaagtagaatat 20364580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 4195015 - 4194975
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaata 201  Q
    ||||| ||||||||||||||||||||||| |||||| ||||    
T  4195015 tattgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 4475347 - 4475255
Alignment:
Q  143 ttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||||  |||| ||||||||||||||||  | |||||||||||| |||||  || || ||||||| ||| |  | |||||||||||||||    
T  4475347 ttgagtgtccttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaaaatgttgaattggaaatgataaaagtagtattaatt 4475255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 24231116 - 24231044
Alignment:
Q  138 tgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||| | |||| ||||||||||||| |||||||| |  || |||||||| |||||  |||||||||||||    
T  24231116 tgattttaactgttcttgttaagtattgatgcattctccactaccataaatggaaagtggaatatattgaatt 24231044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 39061135 - 39061175
Alignment:
Q  317 aaatgattcagttattacgggagggatgaagtaattaatta 357  Q
    ||||||||||||||||| |||| ||| ||||||||||||||    
T  39061135 aaatgattcagttattatgggatggaggaagtaattaatta 39061175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 12413 - 12545
Alignment:
Q  114 gtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttga 213  Q
    |||||||||||||||||       || |||||||||| ||||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||       
T  12413 gtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattataaatgtaaagtagaatatattgaattaag 12512  T
Q  214 agttgtgaaagtagtattaatttgagttataat 246  Q
    | | |||||||||||||||||| ||||||||||    
T  12513 aatggtgaaagtagtattaattagagttataat 12545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 229914 - 229822
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||||||| | |||||||||||| |||||   |||||||||||| |||||||||||||||||||||||| |||||||||    
T  229914 ttgttaagtattggtgcattctccattatcataaatgcaaagtggtatatattgaattggaagttgtgaaagtagtattaattagagttataa 229822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 5968 - 5817
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||||||||||||| ||||||||       |||| |||||||| ||| | |||||||| ||||||  |||||||||||||||||    
T  5968 tttcacacaaattaagaaaagtgtataaataaaagagagaaaaa--tgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatgta 5871  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||| |||||||||||||   ||| ||||||||||||||||||  ||||||||    
T  5870 aagtagaatatattgaattgagagtggtgaaagtagtattaattaaagttataa 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 10815 - 10889
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatt 235  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||    
T  10815 tattggttcattcttctttatcataaatgcaaagtaaaatatattgaattaggagtggtgaaagtagtattaatt 10889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 7978 - 8064
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||  ||||||||||    
T  7978 tattggtgcatttctctttatcataaatgtaaagtaaaatatattgaattgagaattgtgaaagtagtattaattaaagttataatt 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 171322 - 171223
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataatt 247  Q
    |||| |||| |||||||||||| ||   | ||||||||||||||||||| ||||||||||||| | |||  |||||||| ||||||| ||||||||||||    
T  171322 tgttcttgtcaagtattggtgcgtttaccattatcataaatgtaaagtagaatatattgaattaggagtgatgaaagtaatattaatatgagttataatt 171223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 394874 - 394777
Alignment:
Q  148 tgtttttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||||||||||||||  |||||||| ||||||||||  |||||  |||||| ||||||   |||  ||||||||||||||||| |||||||||    
T  394874 tgtttttgttaagtattggtctattcttctctatcataaatacaaagtggaatatagtgaattgagagtgatgaaagtagtattaattagagttataa 394777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 20637 - 20569
Alignment:
Q  62 ccgtcccaatttaattgagtaagttgagcttttcactcagattaagaaaagtgtataaatgaaagagag 130  Q
    |||||||||||||||||||| |||| | | |||||| ||||||||||||| |||||||||| |||||||    
T  20637 ccgtcccaatttaattgagtcagtttaccatttcacacagattaagaaaaatgtataaatggaagagag 20569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 230347 - 230255
Alignment:
Q  153 ttgttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||| || ||| ||||||   |||||||||||| ||| |  ||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  230347 ttgttaagcatgggtacattctctgttatcataaatgcaaaatggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 230255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 14543 - 14455
Alignment:
Q  157 taagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||||||| |||||||| |  | |||||||||||||||  |||||||||||||  || |  ||||||||||||||||| |||||||||    
T  14543 taagtattgatgcattctccactgtcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 14455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 648 - 599
Alignment:
Q  161 tattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatt 210  Q
    ||||||||||||||||||||||||||||  |||||| |||||| ||||||    
T  648 tattggtgcattcttctttatcataaatccaaagtagaatataatgaatt 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 98977 - 98824
Alignment:
Q  92 tttcactcagattaagaaaagtgtataaatgaaagagagnnnnnnntgattttgagtgtttttgttaagtattggtgcattcttctttatcataaatgta 191  Q
    |||||| || |||||||||| |||||||||||| |||||       ||||||| |||| | ||| |||||||||||||||| | |   || |||||| ||    
T  98977 tttcacacatattaagaaaaatgtataaatgaatgagagagaaaaatgattttaagtgctcttgataagtattggtgcattatccaccataataaatata 98878  T
Q  192 aagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    ||||  |||||||||||||   |||  ||||| || |||||||| |||||||||    
T  98877 aagtggaatatattgaattgagagtgatgaaaataatattaattagagttataa 98824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 26387 - 26321
Alignment:
Q  179 tatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||||||  ||||||||||||| ||| |  | |||||| |||||||| |||||||||    
T  26387 tatcataaatgtaaagtggaatatattgaattggaaatgataaaagtaatattaattagagttataa 26321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 26702 - 26612
Alignment:
Q  155 gttaagtattggtgcattcttctttatcataaatgtaaagtaaaatatattgaatttgaagttgtgaaagtagtattaatttgagttataa 245  Q
    |||||||||||||  ||||| |  ||||||||||| |||||  |||||||||||||   |||  ||||||||||||||||| || ||||||    
T  26702 gttaagtattggtctattctccactatcataaatgcaaagtggaatatattgaattgcgagtgatgaaagtagtattaattagaattataa 26612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University