View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18931_high_1 (Length: 328)
Name: NF18931_high_1
Description: NF18931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18931_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 839801 - 840096
Alignment:
| Q |
16 |
aatattctttgtgaataaggccaacttaattaggacgtaaatcatggaatttaatactatcattcattcaaattaaacgaggattactacatcatattcc |
115 |
Q |
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| T |
839801 |
aatattctttgtgaataaggccaacttaattaggacgtaaatcatggaatttaatactatcattcattcaaattaaacgaggattactacatcatattcc |
839900 |
T |
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| Q |
116 |
tcgatctttgtcattaaaacttttagtgccagaatttattttttccttttcaaaaagtaatatattctttgcatcatttcaaaagctcatttatcttaaa |
215 |
Q |
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| T |
839901 |
tcgatctttgtcattaaaacttttagtgccagaattttttttttccttttcaaaaagt-atatattctttgcatcatttcaaaagctcatttatcttaaa |
839999 |
T |
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| Q |
216 |
agattctcaagacaaaaatcttcctattatttaatctgattgatttcttaccaatttgatcttacaaaaccatccaccacaaagcatcctaaattag |
312 |
Q |
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| T |
840000 |
agattctcaagacaaaaatcttcctattatttaatctaattgatttcttaccaatttgatcttacaagaccatccaccacaaagcatcctaaattag |
840096 |
T |
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