View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18931_low_3 (Length: 307)

Name: NF18931_low_3
Description: NF18931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18931_low_3
NF18931_low_3
[»] chr1 (16 HSPs)
chr1 (18-280)||(47559381-47559644)
chr1 (109-247)||(5509775-5509915)
chr1 (112-247)||(24185588-24185724)
chr1 (104-247)||(5209595-5209740)
chr1 (104-234)||(12027845-12027975)
chr1 (109-189)||(47397446-47397528)
chr1 (135-247)||(9023257-9023371)
chr1 (129-234)||(28945759-28945865)
chr1 (129-247)||(36296737-36296857)
chr1 (129-247)||(42722272-42722392)
chr1 (114-233)||(41665661-41665780)
chr1 (129-234)||(26221733-26221838)
chr1 (96-135)||(44310545-44310584)
chr1 (272-307)||(47560122-47560157)
chr1 (202-247)||(49229351-49229397)
chr1 (279-307)||(25785958-25785986)
[»] chr2 (25 HSPs)
chr2 (19-244)||(30386901-30387128)
chr2 (104-242)||(19091099-19091238)
chr2 (96-230)||(25621500-25621635)
chr2 (97-243)||(10022958-10023106)
chr2 (104-230)||(11199200-11199327)
chr2 (104-244)||(14904071-14904213)
chr2 (104-229)||(6883063-6883188)
chr2 (130-243)||(9057448-9057561)
chr2 (95-247)||(38566113-38566259)
chr2 (109-246)||(13597795-13597933)
chr2 (129-247)||(7880299-7880419)
chr2 (104-234)||(38422853-38422982)
chr2 (129-232)||(29303227-29303331)
chr2 (104-247)||(41302364-41302507)
chr2 (129-234)||(19678077-19678183)
chr2 (109-187)||(31549083-31549162)
chr2 (129-234)||(90269-90375)
chr2 (129-234)||(2565670-2565776)
chr2 (129-234)||(18781122-18781228)
chr2 (176-243)||(25416049-25416117)
chr2 (97-145)||(41422465-41422513)
chr2 (93-234)||(24484534-24484673)
chr2 (203-243)||(33054821-33054862)
chr2 (203-247)||(45277506-45277551)
chr2 (118-158)||(9425130-9425170)
[»] chr7 (22 HSPs)
chr7 (18-244)||(28460069-28460299)
chr7 (109-244)||(40934096-40934232)
chr7 (109-234)||(9420513-9420639)
chr7 (93-243)||(21863647-21863798)
chr7 (145-247)||(39038847-39038951)
chr7 (112-237)||(45445992-45446117)
chr7 (96-238)||(8604505-8604647)
chr7 (91-229)||(5770933-5771068)
chr7 (142-247)||(43179378-43179484)
chr7 (104-227)||(8113830-8113954)
chr7 (139-240)||(35118198-35118300)
chr7 (176-234)||(8069629-8069687)
chr7 (176-233)||(6189391-6189448)
chr7 (129-234)||(48238508-48238614)
chr7 (129-234)||(19311880-19311986)
chr7 (94-243)||(44733683-44733832)
chr7 (129-247)||(48636737-48636857)
chr7 (104-145)||(3123909-3123950)
chr7 (104-157)||(24441864-24441917)
chr7 (183-247)||(29636886-29636951)
chr7 (202-247)||(24441941-24441987)
chr7 (184-244)||(41822131-41822192)
[»] chr4 (23 HSPs)
chr4 (18-244)||(21320060-21320288)
chr4 (97-247)||(10142187-10142339)
chr4 (109-243)||(10373291-10373427)
chr4 (115-247)||(52459060-52459194)
chr4 (115-247)||(52460317-52460451)
chr4 (112-240)||(41509117-41509246)
chr4 (104-247)||(1843077-1843218)
chr4 (109-243)||(24611271-24611407)
chr4 (109-247)||(25201054-25201194)
chr4 (130-243)||(29282952-29283066)
chr4 (152-247)||(42512194-42512291)
chr4 (93-189)||(3665342-3665437)
chr4 (109-247)||(9921776-9921911)
chr4 (96-247)||(13957294-13957434)
chr4 (129-247)||(51337686-51337806)
chr4 (176-243)||(3665451-3665519)
chr4 (129-234)||(14192263-14192369)
chr4 (129-234)||(28143395-28143501)
chr4 (144-234)||(51890662-51890752)
chr4 (96-156)||(42511630-42511690)
chr4 (151-234)||(51890395-51890478)
chr4 (202-247)||(36213777-36213822)
chr4 (202-247)||(6261595-6261641)
[»] chr8 (13 HSPs)
chr8 (18-242)||(28374393-28374619)
chr8 (93-243)||(11648658-11648809)
chr8 (109-247)||(9382145-9382285)
chr8 (93-247)||(24190253-24190405)
chr8 (129-234)||(28509309-28509415)
chr8 (129-234)||(2879157-2879263)
chr8 (129-234)||(11994652-11994758)
chr8 (104-244)||(9137582-9137719)
chr8 (111-189)||(24682741-24682820)
chr8 (143-244)||(23232178-23232281)
chr8 (109-155)||(10697479-10697525)
chr8 (203-247)||(6927561-6927606)
chr8 (203-247)||(45117510-45117555)
[»] chr5 (18 HSPs)
chr5 (109-247)||(8806239-8806378)
chr5 (109-247)||(29789589-29789729)
chr5 (109-243)||(3654720-3654855)
chr5 (109-247)||(38915635-38915774)
chr5 (104-247)||(13826130-13826280)
chr5 (96-227)||(43171311-43171443)
chr5 (104-247)||(37134772-37134917)
chr5 (111-242)||(5121110-5121245)
chr5 (104-243)||(16040105-16040242)
chr5 (139-240)||(6769315-6769415)
chr5 (115-225)||(29149719-29149825)
chr5 (111-218)||(20891316-20891424)
chr5 (117-197)||(23319699-23319781)
chr5 (109-244)||(13820786-13820926)
chr5 (129-234)||(38491095-38491201)
chr5 (129-234)||(14651677-14651783)
chr5 (176-234)||(7850363-7850421)
chr5 (93-158)||(23151541-23151606)
[»] chr3 (18 HSPs)
chr3 (109-243)||(30191089-30191225)
chr3 (96-247)||(47185009-47185162)
chr3 (98-247)||(3918033-3918190)
chr3 (109-247)||(1424739-1424877)
chr3 (93-247)||(29713850-29714002)
chr3 (112-247)||(11639915-11640052)
chr3 (109-238)||(12893104-12893235)
chr3 (124-233)||(1698478-1698588)
chr3 (139-240)||(16876826-16876928)
chr3 (134-240)||(40145515-40145622)
chr3 (104-243)||(53472169-53472311)
chr3 (109-228)||(4127587-4127703)
chr3 (93-244)||(10992979-10993129)
chr3 (129-247)||(23044836-23044956)
chr3 (129-234)||(6024705-6024811)
chr3 (129-234)||(31884896-31885002)
chr3 (203-247)||(10994164-10994209)
chr3 (117-158)||(46947524-46947565)
[»] scaffold0002 (1 HSPs)
scaffold0002 (94-234)||(98255-98396)
[»] scaffold0137 (1 HSPs)
scaffold0137 (98-247)||(21343-21500)
[»] scaffold0263 (1 HSPs)
scaffold0263 (109-238)||(18519-18649)
[»] chr6 (13 HSPs)
chr6 (104-247)||(11680772-11680917)
chr6 (96-227)||(26817421-26817554)
chr6 (104-247)||(19107980-19108121)
chr6 (129-247)||(33516566-33516686)
chr6 (93-244)||(3229105-3229254)
chr6 (120-234)||(14677787-14677902)
chr6 (104-189)||(22524816-22524902)
chr6 (108-247)||(31129789-31129925)
chr6 (104-234)||(4065504-4065633)
chr6 (185-232)||(12269458-12269505)
chr6 (104-157)||(4090710-4090763)
chr6 (203-243)||(15060214-15060255)
chr6 (167-247)||(13758758-13758837)
[»] scaffold1364 (1 HSPs)
scaffold1364 (94-234)||(902-1047)
[»] scaffold1266 (1 HSPs)
scaffold1266 (109-234)||(1371-1497)
[»] scaffold0160 (1 HSPs)
scaffold0160 (104-231)||(25179-25307)
[»] scaffold0064 (1 HSPs)
scaffold0064 (104-243)||(60441-60584)
[»] scaffold0178 (2 HSPs)
scaffold0178 (152-234)||(2393-2475)
scaffold0178 (104-155)||(1155-1206)
[»] scaffold0116 (1 HSPs)
scaffold0116 (93-234)||(40874-41012)
[»] scaffold0743 (1 HSPs)
scaffold0743 (129-247)||(3243-3363)


Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 47559381 - 47559644
Alignment:
Q  18 aagttcacattactgtattgaaaaatagagactgaactttagcacctaagaaattttaactatattgattgaaatttttgcaattatttcgatcaattca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47559381 aagttcacattactgtattgaaaaatagagactgaactttagcacctaagaaattttaactatattgattgaaatttttgcaatcatttcgatcaattca 47559480  T
Q  118 agaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47559481 agaaagttgacattactatattgatataatttaattttttgaaactttgaaagacaatattaagattaatttctctagtaagcacatttttaactaaaat 47559580  T
Q  218 ataatttgttttgttataaaattatcccaa-nnnnnnnataataaatatcaccaatacttttta 280  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  47559581 ataatttgttttgttataaaattatcccaatttttttgataataaatatcaccaatacttttta 47559644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 5509775 - 5509915
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataattt-aattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||| |||||||||||||| ||||||| |||||||||    
T  5509775 atcaattcaagaaagttgacattactatattgatataatttaaatttttggaatctttgaaagacaagattaagattaatttatctagtaggcacatttt 5509874  T
Q  208 taactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
     | |||||||| ||||| ||||||||| |||||||||||||    
T  5509875 catctaaaatagaatttattttgttatgaaaattatcccaa 5509915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 247
Target Start/End: Original strand, 24185588 - 24185724
Alignment:
Q  112 aattcaagaaagttgacattactatattgatataatttaattttttgaaactt-taaaagacaatattaagattaatttctctagtaagcacatttttaa 210  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||  ||||||  | |||||| ||    
T  24185588 aattcaagcaagtttacattactatattgatataatttaattttttggaacttctgaaagacaagattaagattaattttgctagtagacccattttcaa 24185687  T
Q  211 ctaaaatataatttgttttgttataaaattatcccaa 247  Q
    |||||||||||||||||||||||||||||||||||||    
T  24185688 ctaaaatataatttgttttgttataaaattatcccaa 24185724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 5209595 - 5209740
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||||||||||||||||||||||||||||||| |||| || |||||||||| |||| ||| |||| |||||||||||||||| ||||| | |     
T  5209595 tttcaatcaattcaagaaagttgacattactatattgatgtaatatatttttttgaaacctttgaaaaacaagattaagattaatttctttagtaggtat 5209694  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||    
T  5209695 attttcaactaaaatataatttgttttgttatgaaaattatcccaa 5209740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 234
Target Start/End: Complemental strand, 12027975 - 12027845
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcaca 203  Q
    |||| ||||||| ||||||| || |||||| |||| |||  |||||| ||||||||| |||| |||||||||||||||||||||||||||| || |  ||    
T  12027975 tttcaatcaattgaagaaagctggcattacaatatcgatgcaatttatttttttgaacctttgaaagacaatattaagattaatttctctaataggtcca 12027876  T
Q  204 tttttaactaaaatataatttgttttgttat 234  Q
    |||| ||||||||| ||||||||||||||||    
T  12027875 ttttcaactaaaatctaatttgttttgttat 12027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 47397446 - 47397528
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaattt 189  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||| |||||||| ||||||||||||||    
T  47397446 atcaattcaagaaagttgacattactatattgatataatttattttttttggaacctttgaaagacaagattaagattaattt 47397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 9023371 - 9023257
Alignment:
Q  135 atattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgtta 233  Q
    |||||||||||||||| ||||||| || ||||||||||||| |||  | |||||||||||||||  | |||||| |||||||||| ||||||||||||||    
T  9023371 atattgatataatttatttttttggaatctttaaaagacaagattttggttaatttctctagtagactcattttcaactaaaatagaatttgttttgtta 9023272  T
Q  234 -taaaattatcccaa 247  Q
     ||||| ||||||||    
T  9023271 ttaaaactatcccaa 9023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 28945759 - 28945865
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| ||||||||||||||||||||||    |||||| ||||||||||||||||||    
T  28945759 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctctagtagatccattttcaactaaaatataatttgt 28945857  T
Q  227 tttgttat 234  Q
    ||||||||    
T  28945858 tttgttat 28945865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 36296857 - 36296737
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || || || ||||||||||||||||  |||| || |||||| ||||||||||||||||||    
T  36296857 attactatattgatataattaatttattttggatactttcaagga-aagattaagattaatttcttcagtaggcccattttcaactaaaatataatttgt 36296759  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    || ||||| |||||| ||||||    
T  36296758 ttggttatgaaaattctcccaa 36296737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 42722392 - 42722272
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || || || ||||||||||||||||  |||| || |||||| ||||||||||||||||||    
T  42722392 attactatattgatataattaatttattttggatactttcaagga-aagattaagattaatttcttcagtaggcccattttcaactaaaatataatttgt 42722294  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    || ||||| |||||| ||||||    
T  42722293 ttggttatgaaaattctcccaa 42722272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 41665780 - 41665661
Alignment:
Q  114 ttcaagaaagttgacattactatattgatataatt--taattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaac 211  Q
    ||||||||||||||||||  || ||||||||||||  | |||||| |||  ||  |||||||| ||||| | |||||| |||||||  |||||||| |||    
T  41665780 ttcaagaaagttgacatt--tacattgatataattatttatttttagaacattcgaaagacaagattaaaactaatttatctagtagacacattttcaac 41665683  T
Q  212 taaaatataatttgttttgtta 233  Q
    |||||||||||||  |||||||    
T  41665682 taaaatataatttactttgtta 41665661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 26221838 - 26221733
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||||| ||| |||||||||||||| | ||||| |  ||||||  |||||||||| ||||||    
T  26221838 attactatattgatataattaatttattttggatactttaaaag-caagattaagattaattt-tgtagtaggtccattttctactaaaatattatttgt 26221741  T
Q  227 tttgttat 234  Q
    ||||||||    
T  26221740 tttgttat 26221733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 44310584 - 44310545
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattacta 135  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  44310584 tgcaattctttcaatcaattcaagaaagttgacattacta 44310545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 47560122 - 47560157
Alignment:
Q  272 tactttttaataggcttaatacatcatttggtccct 307  Q
    ||||||| ||||||||||||||||||||||||||||    
T  47560122 tacttttcaataggcttaatacatcatttggtccct 47560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 49229351 - 49229397
Alignment:
Q  202 catttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||    
T  49229351 cattttcaactaaaatataatttattttgttatgaaaattatcccaa 49229397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 307
Target Start/End: Original strand, 25785958 - 25785986
Alignment:
Q  279 taataggcttaatacatcatttggtccct 307  Q
    |||||||||||||||||||||||||||||    
T  25785958 taataggcttaatacatcatttggtccct 25785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 244
Target Start/End: Complemental strand, 30387128 - 30386901
Alignment:
Q  19 agttcacattactgtattgaaaaatagagactgaacttt-agcacctaagaaattttaactatattgattgaaatttttgcaattatttcgatcaattca 117  Q
    |||| |||| ||| ||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||| |||||||||||||  |||| || ||||||    
T  30387128 agttgacataactatattgaaaaatagagaccgaaattttagcacctaagaaattttagctatattgattcaaatttttgcaatcctttcaatgaattca 30387029  T
Q  118 agaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaa 216  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  30387028 agaaagttgacattactatattgatataatttaattttttggaacctttaaaagacaagattaagattaatttatctagtaagcccatttttaactaaaa 30386929  T
Q  217 tataatttgttttgttataaaattatcc 244  Q
    ||||||||||||||||||||||||||||    
T  30386928 tataatttgttttgttataaaattatcc 30386901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 19091099 - 19091238
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||| ||||| || |||||||||||||||||||||| || |    
T  19091099 tttcaatcaattcatgaaatttgacattactatattgatataattt-attttttgaaacctttgaaagataagattaagattaatttctctagtaggccc 19091197  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattat 242  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  19091198 attttcaactaaaatataatttgttttgttatgaaaattat 19091238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 25621635 - 25621500
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctcta 194  Q
    ||||||| |||| |||||||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||||||| |||||||||||||| |||     
T  25621635 tgcaattctttcaatcaattcaagaaagttgacattactatttttatataatttatttttttgaaacctttaaaagacaagattaagattaatttatctt 25621536  T
Q  195 gtaagcacatttttaactaaaatataatttgttttg 230  Q
    ||| |  |||||| ||||||||||||||||||||||    
T  25621535 gtaggtccattttcaactaaaatataatttgttttg 25621500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 10023106 - 10022958
Alignment:
Q  97 gcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctag 195  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| ||||||||||  ||||||||||| |||||||||||  ||||||||||||||||||||    
T  10023106 gcaatcatttcattcaattcaagaaagttgacattattatatagatataatttgtttttttgaaacctttaaaagacatgattaagattaatttctctag 10023007  T
Q  196 taagcacatttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    |||   || ||| |||||||||||| ||||||||||||| |||||||||    
T  10023006 taaaaccactttcaactaaaatatattttgttttgttatgaaaattatc 10022958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 11199200 - 11199327
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||| ||||||| ||||||||||||||||||||| ||||| |||||||||| |||| ||| |||| |||||||||||||||||||||| || |    
T  11199200 tttcaatcaatacaagaaaattgacattactatattgatatgatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtatgccc 11199299  T
Q  203 atttttaactaaaatataatttgttttg 230  Q
    ||||| |||||||||| |||||||||||    
T  11199300 attttcaactaaaatagaatttgttttg 11199327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 14904213 - 14904071
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttg-aaactttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||| |||||||| ||||| |||||||| ||||||| |       
T  14904213 tttcaatcaattcaagaaagttgacattactatattgatgtaatttatttttttgtaacctttgaaagacaagattaaaattaatttttctagtaggtct 14904114  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
    ||||| ||||||||||||||||||||||| || ||||||||||    
T  14904113 attttcaactaaaatataatttgttttgtcatgaaaattatcc 14904071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 229
Target Start/End: Complemental strand, 6883188 - 6883063
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcaca 203  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| ||| |||||||| |||| ||||||||||||||||| |||| |||      
T  6883188 tttcaatcaattcaagaaagttgacattactatatcgatgtaatttattttttggaacctttaaaaaacaagattaagattaatttctcaagtaggcatg 6883089  T
Q  204 tttttaactaaaatataatttgtttt 229  Q
    |||| |||||||||||||||| ||||    
T  6883088 ttttcaactaaaatataatttttttt 6883063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 9057561 - 9057448
Alignment:
Q  130 ttactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttt 228  Q
    |||| ||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |  || || || |||||||||||||||||    
T  9057561 ttaccataatgatataatttaattttttggaacctttgaaagacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttgttt 9057462  T
Q  229 tgttataaaattatc 243  Q
    || ||||||||||||    
T  9057461 tg-tataaaattatc 9057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 247
Target Start/End: Original strand, 38566113 - 38566259
Alignment:
Q  95 ttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctct 193  Q
    |||||||  |||| |||||||||||||| |||||||||| ||||||||||||||   ||||||||||| ||| |||||||| ||||||||||||||| ||    
T  38566113 ttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataatt---ttttttgaaaccttagaaagacaagattaagattaatttc-ct 38566208  T
Q  194 agtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||   || || ||| |||||||||||||||||||||||||| |||||||||||||    
T  38566209 ag---gctca-tttcaactaaaatataatttgttttgttatgaaaattatcccaa 38566259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 13597795 - 13597933
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||| || |||| ||| ||||||||| | |||||||| ||||||||| | | |||||| ||||| ||||| ||||||||   ||||| |  ||||||    
T  13597795 atcaatttaaaaaagatgaaattactataatcatataattaaattttttggatcctttaaatgacaagattaatattaatttgcttagtaggttcatttt 13597894  T
Q  208 taactaaaatataatttgttttgttataaaattatccca 246  Q
     ||||||||||||||||||||||||||||||||||||||    
T  13597895 caactaaaatataatttgttttgttataaaattatccca 13597933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 7880299 - 7880419
Alignment:
Q  129 attactatattgatataatttaatt-ttttgaa-actttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || ||||||| ||||| || || || |||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  7880299 attactatattgatataattaatttattttgaatacttttaagga-aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgt 7880397  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    |||||||| |||||| ||||||    
T  7880398 tttgttatgaaaattctcccaa 7880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 38422853 - 38422982
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcaca 203  Q
    |||| |||||| ||||||| |||||| ||||||||||||||||||| |||||||| | | |  ||||| || ||| ||||| ||||||| |||| || ||    
T  38422853 tttcaatcaatccaagaaaattgacactactatattgatataattt-attttttggatcctctaaagaaaagattgagatttatttctcaagtatgctca 38422951  T
Q  204 tttttaactaaaatataatttgttttgttat 234  Q
    |||| ||||||||||| ||||||||||||||    
T  38422952 ttttcaactaaaatatcatttgttttgttat 38422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 29303331 - 29303227
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| |||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  29303331 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctctagtaggcccattttcaactaaaatataatttgt 29303233  T
Q  227 tttgtt 232  Q
    ||||||    
T  29303232 tttgtt 29303227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 41302364 - 41302507
Alignment:
Q  104 tttcgatcaattcaagaaagtt-gacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctctagtaagca 201  Q
    |||| |||||||||| ||| || |||||| | |||||||||||||||| ||||||| ||  ||| |||||||| |||||||| ||||||    ||| ||     
T  41302364 tttcaatcaattcaataaaatttgacattgcgatattgatataatttatttttttggaatcttagaaagacaagattaagatcaatttc----gtaggct 41302459  T
Q  202 cattttt-aactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41302460 catttttgaactaaaatataatttgttttgttatgaaaattatcccaa 41302507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 19678183 - 19678077
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| ||||||||||||||||||||||  | |||||| ||||||||||||||||||    
T  19678183 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctctagtagacccattttcaactaaaatataatttgt 19678085  T
Q  227 tttgttat 234  Q
    ||||||||    
T  19678084 tttgttat 19678077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 31549083 - 31549162
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaat 187  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| ||| |||| ||| |||| ||||| ||||||    
T  31549083 atcaattcaaaaaagttgacattactataatgatataatttaattttttggaacctttgaaaaacaagattaaaattaat 31549162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 90269 - 90375
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | |||||||||||||||||| |||| || || |||||| ||||||||||| ||| ||    
T  90269 attactatattgatataattaatttattttggatactttaaagg-caatattaagattaatttttctaataggcccattttcaactaaaatattattcgt 90367  T
Q  227 tttgttat 234  Q
    ||||||||    
T  90368 tttgttat 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 2565776 - 2565670
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | ||| |||||||||||||| ||||||| || ||||||  |||||||||| ||||||    
T  2565776 attactatattgatataattaatttattttggatactttaaagg-caaaattaagattaatttttctagtaggcccattttctactaaaatattatttgt 2565678  T
Q  227 tttgttat 234  Q
    ||||||||    
T  2565677 tttgttat 2565670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 18781122 - 18781228
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | ||| |||||||||||||| ||||||| || ||||||  |||||||||| ||||||    
T  18781122 attactatattgatataattaatttattttggatactttaaagg-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgt 18781220  T
Q  227 tttgttat 234  Q
    ||||||||    
T  18781221 tttgttat 18781228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 25416049 - 25416117
Alignment:
Q  176 attaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    ||||||||||||||||||| || |  |||||| ||||||||||||||||| |||||||| |||||||||    
T  25416049 attaagattaatttctctaataggtccattttcaactaaaatataatttgctttgttatcaaaattatc 25416117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 41422465 - 41422513
Alignment:
Q  97 gcaattatttcgatcaattcaagaaagttgacattactatattgatata 145  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  41422465 gcaattattttgatcaattcaagaaatttgacattacaatattgatata 41422513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 24484673 - 24484534
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataattta--attttttgaaactttaaaagacaatattaagattaatttc 190  Q
    |||||||||  |||| | |||||||||||| |||||||||| ||||||||||||||||  | ||||| || |    |||||||| |||||||||||||      
T  24484673 ttttgcaatgctttcaaccaattcaagaaatttgacattacaatattgatataatttagtaattttttaaccacagaaagacaagattaagattaatt-- 24484576  T
Q  191 tctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
      | ||   | |||||| ||||||||||||||||||||||||||    
T  24484575 --ttgttgcctcattttcaactaaaatataatttgttttgttat 24484534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 33054862 - 33054821
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  33054862 attttcaactaaaatataatttgttttgttatgaaaattatc 33054821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 45277506 - 45277551
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||    
T  45277506 attttcaactaaaatataatttgttttgttatgaaaattctcccaa 45277551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 9425130 - 9425170
Alignment:
Q  118 agaaagttgacattactatattgatataatttaattttttg 158  Q
    |||||||||||||||||||||| |||| ||||| |||||||    
T  9425130 agaaagttgacattactatattaatattatttatttttttg 9425170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 28460069 - 28460299
Alignment:
Q  18 aagttcacattactgtattgaaaaatagagactgaacttt-agcacctaagaaattttaactatattgattgaaatttttgcaattatttcgatcaattc 116  Q
    ||||| |||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  28460069 aagttgacattactatattgaaaaatagagattgaaattttagcacctaagaaattttaactgtattgattgaaatttttgcaatcctttcgatcaattc 28460168  T
Q  117 aagaaagttgacattactatattgatataatttaatttttt---gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaacta 213  Q
    ||||||||||||||| |||||||||||||||||||||||||   ||| ||||||||||||||||||| |||||||| |||||||||| |||||| |||||    
T  28460169 aagaaagttgacattgctatattgatataatttaattttttttggaacctttaaaagacaatattaaaattaatttttctagtaagcccattttcaacta 28460268  T
Q  214 aaatataatttgttttgttataaaattatcc 244  Q
    |||||| ||||||||||||| ||||||||||    
T  28460269 aaatatcatttgttttgttaaaaaattatcc 28460299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 40934232 - 40934096
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||||| ||||  | || |||    
T  40934232 atcaattgaagaaagttgacattactataatgatataatttcattttttgtaacctttgaaagacaagattaagattaatttctccagtatacccaattt 40934133  T
Q  208 taactaaaatataatttgttttgttataaaattatcc 244  Q
     |||||||| |||||||||||||||||||||||||||    
T  40934132 caactaaaacataatttgttttgttataaaattatcc 40934096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 9420639 - 9420513
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||| |||||||||| ||||||||| || | ||||||    
T  9420639 atcaattcaagaaagttgacattactacattgatataatttatttttttggaatctttaaaagacaagattaagattattttctctaggaaactcatttt 9420540  T
Q  208 taactaaaatataatttgttttgttat 234  Q
     |||||||||| ||||| |||||||||    
T  9420539 caactaaaataaaatttattttgttat 9420513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 21863798 - 21863647
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctc 192  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| |||| |||||||||| ||||| ||| |||| || ||||  |||||||||||||||||    
T  21863798 ttttgcaatcatttcaatcaattcaaaaaagttgacattactttattaatataatttattttttggaatctttgaaggacatgattaagattaatttctc 21863699  T
Q  193 tagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    || |  |  |||||| ||||||||||||||||| |||||||| |||||||||    
T  21863698 tacttggtccattttcaactaaaatataatttgctttgttatgaaaattatc 21863647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 39038847 - 39038951
Alignment:
Q  145 aatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgtta-taaaattat 242  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||  ||||||||    
T  39038847 aatttaattttttgaaacctttaacagacaagattaagattaatttatctagtaggcccatttttaactaaaatataatttgttttgttacgaaaattat 39038946  T
Q  243 cccaa 247  Q
    |||||    
T  39038947 cccaa 39038951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 45445992 - 45446117
Alignment:
Q  112 aattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaac 211  Q
    ||||| |||||| | |||||||||||||||||||||||  ||||| ||| |||| ||||| || ||||| |||||||||||||||| ||  ||||| |||    
T  45445992 aattcgagaaagctaacattactatattgatataattttttttttggaacctttgaaagaaaagattaaaattaatttctctagtaggccaattttcaac 45446091  T
Q  212 taaaatataatttgttttgttataaa 237  Q
    |||||||||||||||||| |||||||    
T  45446092 taaaatataatttgttttcttataaa 45446117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 238
Target Start/End: Original strand, 8604505 - 8604647
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctcta 194  Q
    |||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||| ||| |||||||| ||||||||||| || ||||    
T  8604505 tgcaatcatttaaatcaattcaagaaatttgacattact-tattgatgtaatttaattttttggaacctttgaaagacaagattaagattaacttatcta 8604603  T
Q  195 gtaagcacatttttaactaaaatataatttgttttgttataaaa 238  Q
    ||| |   ||||| || ||||||||||||| ||| |||||||||    
T  8604604 gtaggtcaattttcaaataaaatataatttatttagttataaaa 8604647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 5771068 - 5770933
Alignment:
Q  91 atttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaat-tttttgaaactttaaaagacaatattaagattaattt 189  Q
    |||||||||||  |||| |||||||||||||| |||||||||| |||||||||||||||| | |||| |||||||  |||||||| ||||| ||||||||    
T  5771068 atttttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataatttactcttttggaaacttagaaagacaagattaatattaattt 5770969  T
Q  190 ctctagtaagcacatttttaactaaaatataatttgtttt 229  Q
    |    ||| || |||||| |||||||||||||||| ||||    
T  5770968 c----gtaggctcattttcaactaaaatataatttatttt 5770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 247
Target Start/End: Original strand, 43179378 - 43179484
Alignment:
Q  142 tataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttataaaatt 240  Q
    |||||||||||||||  ||| |||| ||||| || |||||||||||||| | || ||  | |||||||||||||||||||||||||||||||||||||||    
T  43179378 tataatttaatttttgagaacctttgaaagataagattaagattaatttttttaatagactcatttttaactaaaatataatttgttttgttataaaatt 43179477  T
Q  241 atcccaa 247  Q
    |||||||    
T  43179478 atcccaa 43179484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 8113830 - 8113954
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||||| ||||| |||||||||||||||| || ||||||| |||||| ||| |||| ||||| ||||||||||||||| ||| ||||| |       
T  8113830 tttcaatcaattcgagaaaattgacattactatattaatgtaatttatttttttagaacctttgaaagaaaatattaagattaatatctgtagtaggttt 8113929  T
Q  203 atttttaactaaaatataatttgtt 227  Q
    ||||| |||||||||||||||||||    
T  8113930 attttcaactaaaatataatttgtt 8113954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 35118198 - 35118300
Alignment:
Q  139 tgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttataaa 237  Q
    ||||||| |||||||||||| ||| ||| |||||||| ||| |||||||||| | ||||| ||  ||||| |||||||||||||||||||||||||||||    
T  35118198 tgatatagtttaattttttggaacctttgaaagacaacattcagattaatttttttagtaggcttattttcaactaaaatataatttgttttgttataaa 35118297  T
Q  238 att 240  Q
    |||    
T  35118298 att 35118300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 8069687 - 8069629
Alignment:
Q  176 attaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  8069687 attaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttat 8069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 6189391 - 6189448
Alignment:
Q  176 attaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgtta 233  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||    
T  6189391 attaagattaatttctctagtatgcccattttcaactaaaatataatttgttttgtta 6189448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 48238614 - 48238508
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| ||||||||| |||||||||||| || |||||| ||||||||||||||||||    
T  48238614 attactatattgatataattaatttattttggatactttcaagg-caagattaagatttatttctctagtaggcccattttcaactaaaatataatttgt 48238516  T
Q  227 tttgttat 234  Q
    ||||||||    
T  48238515 tttgttat 48238508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 19311880 - 19311986
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | |||||||||||||||||| |||| || || |||||| ||||||||||| ||| ||    
T  19311880 attactatattgatataattaatttattttagatactttaaagg-caatattaagattaatttttctaataggcccattttcaactaaaatattattcgt 19311978  T
Q  227 tttgttat 234  Q
    ||||||||    
T  19311979 tttgttat 19311986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 44733832 - 44733683
Alignment:
Q  94 tttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctct 193  Q
    ||||||||  |||| |||||||||| |||||| ||||||||||||||||| ||   ||   || ||| |||| |||||||| |||||  ||||||||| |    
T  44733832 tttgcaatcctttcaatcaattcaaaaaagtttacattactatattgataaaaaaaaaaaattggaatctttgaaagacaagattaaagttaatttct-t 44733734  T
Q  194 agtaagcacatttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    |||| || |||||| ||||||| || ||||| ||||||||| |||||||||    
T  44733733 agtaggctcattttcaactaaattagaatttattttgttatgaaaattatc 44733683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 48636857 - 48636737
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || || || ||||||||||||||||  |||| || |||||| ||||||||||||||||||    
T  48636857 attactatattgatataattaatttattttggatactttcaagga-aagattaagattaatttcttcagtaggcccattttcaactaaaatataatttgt 48636759  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    || ||||| |||||| ||||||    
T  48636758 ttggttatgaaaattctcccaa 48636737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 3123909 - 3123950
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatata 145  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  3123909 tttccatcaactcaagaaagttgacattactatattgatata 3123950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 24441864 - 24441917
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt 157  Q
    |||| ||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  24441864 tttcaatcaatttaagaaagttgacattactatactgatgtaatttattttttt 24441917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 29636886 - 29636951
Alignment:
Q  183 ttaatttctctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||||||||| ||| |  |||||| |||||||||||||||||||||||| | |||||||||||||    
T  29636886 ttaatttctcttgtatgtccattttcaactaaaatataatttgttttgttttgaaaattatcccaa 29636951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 24441941 - 24441987
Alignment:
Q  202 catttttaactaaaatataatttgttttgtta-taaaattatcccaa 247  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  24441941 cattttcaacaaaaatataatttgttttgttattaaaattatcccaa 24441987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 41822131 - 41822192
Alignment:
Q  184 taatttctctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
    |||||| ||||||| |  |||||||||||| |||||||||| ||||||||| ||||||||||    
T  41822131 taatttttctagtaggtccatttttaactataatataatttattttgttatgaaaattatcc 41822192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 6e-74; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 21320288 - 21320060
Alignment:
Q  18 aagttcacattactgtattgaaaaatagagactgaacttt-agcacctaagaaattttaactatattgattgaaatttttgcaattatttcgatcaattc 116  Q
    ||||| |||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||| ||||  |||| ||||||||    
T  21320288 aagtttacattactatattgaaaaatagagactgaaattttatcacctaagaaattttaactatattggttgaaattttttcaatcctttcaatcaattc 21320189  T
Q  117 aagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaa 215  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| | || |||||||||||||| |||||||||| |||||| |||||||    
T  21320188 aagaaagttgacattactatattggtataatttaattttttggaacctttgaaaaataagattaagattaatttatctagtaagcccattttcaactaaa 21320089  T
Q  216 atataatttgttttgttataaaattatcc 244  Q
    |||||||||||||||||||||||||||||    
T  21320088 atataatttgttttgttataaaattatcc 21320060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 10142339 - 10142187
Alignment:
Q  97 gcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttg-aaactttaaaagacaatattaagattaatttctctag 195  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||| || ||||||||||||||||||||    
T  10142339 gcaattctttcaatcaattcaagaaagttgacattactatattgatgtaatttatttttttgcaacctttaaaagataagattaagattaatttctctag 10142240  T
Q  196 taagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||  | |||||| || ||||||||||||||||||||||| |||||||||||||    
T  10142239 tagacccattttcaagtaaaatataatttgttttgttatgaaaattatcccaa 10142187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 10373291 - 10373427
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacattt 206  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||  ||| ||||||| ||||| ||||| |||||||| ||||||| |  |||||    
T  10373291 atcaattcaagaaagttgacattattataatgatataatttaatttttttggaagctttaaatgacaagattaaaattaatttttctagtaggtccattt 10373390  T
Q  207 ttaactaaaatataatttgttttgttataaaattatc 243  Q
    | ||||||||||||||||||||| |||||||||||||    
T  10373391 tcaactaaaatataatttgttttattataaaattatc 10373427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 247
Target Start/End: Complemental strand, 52459194 - 52459060
Alignment:
Q  115 tcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttttaacta 213  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| || |||| |||||||| |||||| ||||||||||| ||| || |||||| |||||    
T  52459194 tcaagaaagttgacattactgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaacta 52459095  T
Q  214 aaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||||||||||||||| |||| ||||||||    
T  52459094 aaatagaatttgttttgttatgaaaaatatcccaa 52459060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 247
Target Start/End: Complemental strand, 52460451 - 52460317
Alignment:
Q  115 tcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttttaacta 213  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| || |||| |||||||| |||||| ||||||||||| ||| || |||||| |||||    
T  52460451 tcaagaaagttgacattactgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaacta 52460352  T
Q  214 aaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||||||||||||||| |||| ||||||||    
T  52460351 aaatagaatttgttttgttatgaaaaatatcccaa 52460317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 41509117 - 41509246
Alignment:
Q  112 aattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaa 210  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| ||| ||| | |  ||||||||||||||||||| || ||| ||||| ||    
T  41509117 aattcaagaaagttgacattactattatgatataatttaattttttggaacctttgaaaaagaccattaagattaatttctctaataggcagattttcaa 41509216  T
Q  211 ctaaaatataatttgttttgttataaaatt 240  Q
    |||||||||||||||||| |||||||||||    
T  41509217 ctaaaatataatttgtttagttataaaatt 41509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 1843077 - 1843218
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||| ||| |||||||| |||||||||||||||     || || |    
T  1843077 tttcaatcaattcaagaaagttgacattacaatatttatataatttatttttttggaaccttagaaagacaagattaagattaatttc----ataggctc 1843172  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||    
T  1843173 attttcaacaaaaatataatttgttttgttatgaaaattatcccaa 1843218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 24611271 - 24611407
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| ||||||| || |||| |||||||| |||||| ||||||| ||||||| ||  |||||    
T  24611271 atcaattcaagaaagttgacaatactatattaataaaatttatttttttggaatctttgaaagacaagattaaggttaatttttctagtaggccaatttt 24611370  T
Q  208 taactaaaatataatttgttttgttat-aaaattatc 243  Q
     |||||||||| ||||||||||||||| |||||||||    
T  24611371 caactaaaatagaatttgttttgttatgaaaattatc 24611407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 25201194 - 25201054
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||| |||| | ||  |   |||||    
T  25201194 atcaattaaaaaaagttgacattactatattgatataatttatttttttggaacttttgaaagacaagattaagattaaattctatggttggtctatttt 25201095  T
Q  208 taactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||||||||||  ||||||||||||| |||||||||||||    
T  25201094 taactaaaatatcttttgttttgttatgaaaattatcccaa 25201054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 29282952 - 29283066
Alignment:
Q  130 ttactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttt 228  Q
    |||| ||| |||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||| |  || || || ||||||||||||| |||    
T  29282952 ttaccataatgatataatttaattttttggaacctttgaaaaacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttattt 29283051  T
Q  229 tgttataaaattatc 243  Q
    |||||||||||||||    
T  29283052 tgttataaaattatc 29283066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 42512194 - 42512291
Alignment:
Q  152 ttttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||||||||| ||| |||||||| |||||||||||||||| ||||| |  |||||| |||||||||||||||||||||||||| |||||||||||||    
T  42512194 ttttttgaaacctttgaaagacaagattaagattaatttctttagtaggttcattttcaactaaaatataatttgttttgttatgaaaattatcccaa 42512291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 3665342 - 3665437
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaattt 189  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||| ||||  |||||||||||||    
T  3665342 ttttgcaatcctttcaatcaattcaagaaagttgacattactatattgatataatttattttttttaatctttgaaa-acaaggttaagattaattt 3665437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 9921776 - 9921911
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||||| |||||| ||||||| |||||||||||||||| | ||||||||| ||| |||||||| |||||||||||||||     || || ||||||    
T  9921776 atcaattcaa-aaagtttacattacaatattgatataatttattattttgaaaccttagaaagacaagattaagattaatttc----ataggctcatttt 9921870  T
Q  208 taactaaaatataatttgttttgtta-taaaattatcccaa 247  Q
     ||||||||||||||||||||| |||  |||||||||||||    
T  9921871 caactaaaatataatttgttttattacgaaaattatcccaa 9921911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 13957434 - 13957294
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctag 195  Q
    ||||||| || | |||||||||||||||||||||||||||||||||| |||||||            ||| |||||||| |||||||||| |||||||||    
T  13957434 tgcaattcttccaatcaattcaagaaagttgacattactatattgatgtaattta------------tttgaaagacaagattaagattagtttctctag 13957347  T
Q  196 taagcacatttttaactaaaatataatttgttttgtta-taaaattatcccaa 247  Q
    || |   ||||| |||||||||||||||||||||||||  |||||||||||||    
T  13957346 taggtctattttcaactaaaatataatttgttttgttacgaaaattatcccaa 13957294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 51337806 - 51337686
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| |||||||||||||||||  ||| || |||||| ||||||||||||||||||    
T  51337806 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctccggtaggcccattttcaactaaaatataatttgt 51337708  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    |||||||| |||||| ||||||    
T  51337707 tttgttatgaaaattctcccaa 51337686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 3665451 - 3665519
Alignment:
Q  176 attaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    ||||||||||||||||||| || || |||||| |||||||||| ||||||||||||||| |||||||||    
T  3665451 attaagattaatttctctaataggctcattttcaactaaaatagaatttgttttgttatgaaaattatc 3665519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 14192263 - 14192369
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | ||| |||||||||||||| ||||||| || ||||||  |||||||||| ||||||    
T  14192263 attactatattgatataattaatttattttggatactttaaagg-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgt 14192361  T
Q  227 tttgttat 234  Q
    ||||||||    
T  14192362 tttgttat 14192369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 28143395 - 28143501
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| ||||||||||||||||||||||    |||||| ||||||||||||||||||    
T  28143395 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctctagtagatccattttcaactaaaatataatttgt 28143493  T
Q  227 tttgttat 234  Q
    ||||||||    
T  28143494 tttgttat 28143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 51890662 - 51890752
Alignment:
Q  144 taatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||||||| |||||| || |||| |||||||| | |||||||||||||| ||||| |   ||||| |||||||||||||||| |||||||||    
T  51890662 taatttattttttttaatctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttat 51890752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 42511630 - 42511690
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttt 156  Q
    |||||| ||||| ||||||||||||||||||| ||||| |||||||| ||||||| |||||    
T  42511630 tgcaatcatttcaatcaattcaagaaagttgagattacaatattgatgtaatttatttttt 42511690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 51890395 - 51890478
Alignment:
Q  151 attttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||||||| || |||| |||||||| | |||||||||||||| ||||| |   ||||| |||||||||||||||| |||||||||    
T  51890395 atttttttaatctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttat 51890478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 36213822 - 36213777
Alignment:
Q  202 catttttaactaaaatataatttgttttgttataaaattatcccaa 247  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||    
T  36213822 cattttcaactaaaatagaatttgttttgttattaaattatcccaa 36213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 6261595 - 6261641
Alignment:
Q  202 catttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  6261595 catttttaactaaaatagaatttgctttgttatgaaaattatcccaa 6261641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 6e-68; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 28374393 - 28374619
Alignment:
Q  18 aagttcacattactgtattgaaaaatagagactgaacttt-agcacctaagaaattttaactatattgattgaaatttttgcaattatttcgatcaattc 116  Q
    ||||| |||||||| ||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||||||  ||||  |||| ||||||||    
T  28374393 aagttgacattactatattgaaaaatagcgactaaaattttagcacctaagaaattttaactatattgattgaaattttctcaatcttttcaatcaattc 28374492  T
Q  117 aagaaagttgacattactatattgatataatttaa-ttttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaa 215  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||  ||||||| |||| ||||||||||||||||||||||| | |||||| |||||||    
T  28374493 aagaaagttgaaattactatattgatataatttaatttttttgaacatttaaaaaacaagattaagattaatttctctagtaaactcattttcaactaaa 28374592  T
Q  216 atataatttgttttgttataaaattat 242  Q
    ||||||||| ||| |||||||||||||    
T  28374593 atataatttatttggttataaaattat 28374619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 11648658 - 11648809
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttct 191  Q
    ||||||||| ||||  ||||||||||||||||| || ||| |||| ||||||||||||||| |||| ||| ||| |||||||| ||| ||||||||||||    
T  11648658 ttttgcaatcattttaatcaattcaagaaagttaaccttagtataatgatataatttaattatttggaacctttgaaagacaagattgagattaatttct 11648757  T
Q  192 ctagtaagcacatttttaactaaaatataatttgttttgttataaaattatc 243  Q
    ||| | ||  |||||| |||||||||||||||||||||||||||||||||||    
T  11648758 ctaatgagtccattttcaactaaaatataatttgttttgttataaaattatc 11648809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 9382145 - 9382285
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||| || ||||| |||||||| |||| || |  ||||||    
T  9382145 atcagttcaagaaagttgacattactatattgatgtaatttaattttttggaacctttgaaagaaaagattaaaattaatttttctaataggtccatttt 9382244  T
Q  208 taactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
     |||||||||||||||||||||||||| |||||||||||||    
T  9382245 caactaaaatataatttgttttgttatgaaaattatcccaa 9382285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 247
Target Start/End: Original strand, 24190253 - 24190405
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttct 191  Q
    |||||||||  |||| ||| |||||| |||||||||||||| |||||||||||||||| |||||||||||  || |||||||| ||||||||||| |||     
T  24190253 ttttgcaatcctttcaatccattcaaaaaagttgacattacaatattgatataatttatttttttgaaaccatagaaagacaaaattaagattaacttc- 24190351  T
Q  192 ctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
       |||  | |||||| |||||||||||||||||||||||||| |||||||||||||    
T  24190352 ---gtagactcattttcaactaaaatataatttgttttgttataaaaattatcccaa 24190405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 28509415 - 28509309
Alignment:
Q  129 attactatattgatataatttaatt-ttttgaa-actttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || ||||||| ||||| || || || |||||||||||||| ||||||| || |||||| ||||||||||||||||||    
T  28509415 attactatattgatataattaatttattttgaatactttcaagga-aagattaagattaatttttctagtaggcccattttcaactaaaatataatttgt 28509317  T
Q  227 tttgttat 234  Q
    ||||||||    
T  28509316 tttgttat 28509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 2879157 - 2879263
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | ||| |||||||||||||| ||||||| || ||||||  |||||||||| ||||||    
T  2879157 attactatattgatataattaatttattttggatactttaaagg-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgt 2879255  T
Q  227 tttgttat 234  Q
    ||||||||    
T  2879256 tttgttat 2879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 11994652 - 11994758
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| |||| |||  || |||||||| | |||||||||||||||||| |||| || || |||||| || |||||||| ||| ||    
T  11994652 attactatattgatataattaaattattttggatactttaaagg-caatattaagattaatttttctaataggcccattttcaagtaaaatattattcgt 11994750  T
Q  227 tttgttat 234  Q
    ||||||||    
T  11994751 tttgttat 11994758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 9137719 - 9137582
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataattta-attttttgaaactttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||||||||||  |||||||||  |||||||||||||| |  ||||||||| |||  |||||||| ||||||||||||        || || |    
T  9137719 tttcaatcaattcaagaattttgacattataatattgatataattaattttttttgaaccttagaaagacaagattaagattaat-----acataggctc 9137625  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  9137624 attttcaactaaaatataatttgttttgttatgaaaattatcc 9137582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 24682820 - 24682741
Alignment:
Q  111 caattcaagaaagttgacattactatattgatataatttaat--tttttgaaactttaaaagacaatattaagattaattt 189  Q
    |||| ||||||| ||||||||||||||||||||||||| | |  ||||||| ||||| |||||||| ||||||||||||||    
T  24682820 caatccaagaaaattgacattactatattgatataattaatttatttttgatacttt-aaagacaagattaagattaattt 24682741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 23232178 - 23232281
Alignment:
Q  143 ataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgtttt-gttataaaatt 240  Q
    |||||||||||||||| ||| ||| ||||| || ||||| ||||||||||  |||| || |||||| || ||||||||||||| |||| |||||||| ||    
T  23232178 ataatttaattttttggaacatttgaaagaaaagattaaaattaatttcttcagtaggctcattttcaattaaaatataatttattttggttataaagtt 23232277  T
Q  241 atcc 244  Q
    ||||    
T  23232278 atcc 23232281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 10697525 - 10697479
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttt 155  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  10697525 atcatttcaagaaagttgacattactatattgatatgatttattttt 10697479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 6927561 - 6927606
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||    
T  6927561 attttcaactaaaatataatttgttttgttatgaaaattctcccaa 6927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 45117555 - 45117510
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||||    
T  45117555 attttcaactaaaatataatttgctttgttatgaaaattatcccaa 45117510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 8806239 - 8806378
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||| || ||  | ||||||    
T  8806239 atcaattcaagaaagttgacattactataatgatataatttaaatttttgaaacctttgaaagacaagattaaaattaatttctttactatactcatttt 8806338  T
Q  208 taactaaaatataatttgttttgttataaaattatcccaa 247  Q
     |||||||||||||||||||||||||||||||||||||||    
T  8806339 caactaaaatataatttgttttgttataaaattatcccaa 8806378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 29789729 - 29789589
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||| ||| |||| ||||||||||||||||||||||  | ||||||    
T  29789729 atcaattcatgaaagttgacgttactatattgatataatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtagacccatttt 29789630  T
Q  208 taactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
     |||||||||| ||||||||||||||| |||||||| ||||    
T  29789629 caactaaaatagaatttgttttgttatgaaaattattccaa 29789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 3654855 - 3654720
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||| |||||||| ||||| |||| ||||||||||| |  ||||||    
T  3654855 atcaattcaagaaagttgacattactatgatgatataatttaatttttttgaacctttgaaagacaagattaaaattagtttctctagtaggtccatttt 3654756  T
Q  208 taactaaaatataatttgttttgttataaaattatc 243  Q
     |||||||||||||||| |||||| |||||||||||    
T  3654755 caactaaaatataatttattttgtaataaaattatc 3654720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 38915635 - 38915774
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||| ||| ||| |||||||| ||||||| |||||||||||||| ||  |||||    
T  38915635 atcaattctagaaagttgacattactataacgatataatttaattttttggaacctttgaaagacaacattaagactaatttctctagtaggcctatttt 38915734  T
Q  208 taactaaaatataatttgttttgttataaaattatcccaa 247  Q
     ||||||||||||  || ||||||||||||||||||||||    
T  38915735 caactaaaatatatatttttttgttataaaattatcccaa 38915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 13826130 - 13826280
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataattta---attttttgaaactttaaa-agacaatattaagattaatttctctagtaag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||| || |||  | |||||| |||||||||||||| |||||||||    
T  13826130 tttcgatcaattcaagaaagttgacattactatattgatataatttatttattttttggaatttttgagagacaagattaagattaatttatctagtaag 13826229  T
Q  200 --cacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
      || ||||| |||||||||| ||||||||||||||| |||||||||||||    
T  13826230 cccatattttcaactaaaatagaatttgttttgttatgaaaattatcccaa 13826280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 43171311 - 43171443
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctcta 194  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| ||| |||| ||| | || |||||||||||||||||||    
T  43171311 tgcaatcatttcgatcaattaaagaaagttgacattactatattgatgtaatttatttttttggaacctttgaaaaaaaaaattaagattaatttctcta 43171410  T
Q  195 gtaagcacatttttaactaaaatataatttgtt 227  Q
    ||| |  |||||| ||||||||||| |||||||    
T  43171411 gtaggtccattttcaactaaaatatcatttgtt 43171443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 37134917 - 37134772
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| |||| |||||||| || || |||||| | ||||||| |       
T  37134917 tttcaatcaaatcaagaaaattgacattactatattgatataatttattttttcgaaacctttgaaagacaagatcaaaattaatatttctagtaggtgt 37134818  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||    
T  37134817 attttcaactaaaatataatttgttttgttatgaaaattattccaa 37134772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 5121110 - 5121245
Alignment:
Q  111 caattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagat--taatttctctagtaagcacatttt 207  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||| |||||||| ||||||||  |||||||||||||| ||  |||||    
T  5121110 caattcaagaaagttgacatcactatattgatataatttatttttttagaacctttgaaagacaagattaagattataatttctctagtaggctaatttt 5121209  T
Q  208 taactaaaatataatttgttttgttat-aaaattat 242  Q
     || ||||||| |||||||||| |||| ||||||||    
T  5121210 caattaaaataaaatttgttttattatgaaaattat 5121245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 16040105 - 16040242
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcaca 203  Q
    |||| ||||||||||||||| |||||||| |||||||||||| |||   |||||| || ||| ||||| ||||||||||||||| ||||||||| || ||    
T  16040105 tttcaatcaattcaagaaagatgacattattatattgatatagttt---tttttggaattttgaaagataatattaagattaatatctctagtaggccca 16040201  T
Q  204 tttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    |||| || |||||||  |||||||||||||| |||||||||    
T  16040202 ttttcaattaaaataagatttgttttgttatgaaaattatc 16040242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 6769315 - 6769415
Alignment:
Q  139 tgatataatttaattttttg-aaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttataaa 237  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||| ||||||||||  |||| ||  |||||||||||||||||||||||||||||||||||    
T  6769315 tgatataatttaattttttggaaaatttcaaagacaacattaaaattaatttct--agtaggcttatttttaactaaaatataatttgttttgttataaa 6769412  T
Q  238 att 240  Q
    |||    
T  6769413 att 6769415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 29149825 - 29149719
Alignment:
Q  115 tcaagaaagttgacattactatattgatataatttaattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaa 214  Q
    ||||||||||||||||||||||||||||||| |||    |||| || |||| |||||||| |||||||||||||||||||||| ||  ||||| ||||||    
T  29149825 tcaagaaagttgacattactatattgatatatttt----tttttaatctttgaaagacaagattaagattaatttctctagtaggctgattttcaactaa 29149730  T
Q  215 aatataatttg 225  Q
    |||| ||||||    
T  29149729 aataaaatttg 29149719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 20891316 - 20891424
Alignment:
Q  111 caattcaagaaagttgacattactatattgatataatttaattttt-tgaaactttaaaagacaatattaagattaatttctctagtaagcacattttta 209  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||||||| || || |||||| |    
T  20891316 caattcaagaaagttgacatttctatattaatataatttattttttgggaatctttgaaagacaaaattaagattaatttctctaataggcccattttca 20891415  T
Q  210 actaaaata 218  Q
    |||| ||||    
T  20891416 actataata 20891424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 23319699 - 23319781
Alignment:
Q  117 aagaaagttgacattactatattgatataatttaa-ttttttgaaa-ctttaaaagacaatattaagattaatttctctagta 197  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | || |||||||| |||||||||||||||| |||||    
T  23319699 aagaaagttgacattactatattgatataatttaatttttttgaaacccttgaaagacaaaattaagattaatttctttagta 23319781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 13820786 - 13820926
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatt----taattttttgaaactttaaaagacaatattaagattaatttctctagtaagcacat 204  Q
    ||||||| ||||||||||||||||||||||||||||||||    |  |||||| |  |||| |||||||| ||| |||||||||| | |||||  | |||    
T  13820786 atcaatttaagaaagttgacattactatattgatataatttgtattttttttttattctttgaaagacaagatttagattaatttatttagtagacccat 13820885  T
Q  205 ttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
    ||| |||||||||| | ||||||||||||| ||||||||||    
T  13820886 tttcaactaaaatagattttgttttgttatgaaaattatcc 13820926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 38491201 - 38491095
Alignment:
Q  129 attactatattgatataatttaatt-ttttgaa-actttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || ||||||| ||||| || || || |||||||||||||| ||||||| || |||||| ||||||||||||||||||    
T  38491201 attactatattgatataattaatttattttgaatactttcaagga-aagattaagattaatttatctagtaggcccattttcaactaaaatataatttgt 38491103  T
Q  227 tttgttat 234  Q
    ||||||||    
T  38491102 tttgttat 38491095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 14651677 - 14651783
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||| | |||||||||||||||||| |||| || || |||||| ||||||||||| ||| ||    
T  14651677 attactatattgatataattaatttattttggatactttaaagg-caatattaagattaatttttctaataggcccattttcaactaaaatattattcgt 14651775  T
Q  227 tttgttat 234  Q
    ||||||||    
T  14651776 tttgttat 14651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 7850421 - 7850363
Alignment:
Q  176 attaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||||||||||||||||| |||| |  |||||| ||||||||||||||||||||||||||    
T  7850421 attaagattaatttctccagtaggtccattttcaactaaaatataatttgttttgttat 7850363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 23151606 - 23151541
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttg 158  Q
    |||||||||  |||| |||||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  23151606 ttttgcaatcctttcaatcaattcaagaaatttgacattacagtattgatataatttatttttttg 23151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 30191089 - 30191225
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacattt 206  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||  |||  ||| |||||||| |||||||||||||||||||||| ||  ||||    
T  30191089 atcaattcaagaaagttgacattactataattatataatttaatttttttggaacatttgaaagacaacattaagattaatttctctagtaggcctattt 30191188  T
Q  207 ttaactaaaatataatttgttttgttataaaattatc 243  Q
    | |||||||||||||||| ||||||||||||||||||    
T  30191189 tcaactaaaatataatttcttttgttataaaattatc 30191225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 47185162 - 47185009
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctcta 194  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||  ||||||| ||| ||| |||||||| |||||||||||||||||||    
T  47185162 tgcaatcatttcaatcaattcaagaaagttgacattattatattgatgtaatttgtttttttggaacctttgaaagacaagattaagattaatttctcta 47185063  T
Q  195 gtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||  |  |||||| |||||||||||||||||||||||||| |||||||||||||    
T  47185062 gtgggtccattttcaactaaaatataatttgttttgttatgaaaattatcccaa 47185009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 3918033 - 3918190
Alignment:
Q  98 caattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-------gaaactttaaaagacaatattaagattaatttc 190  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||| ||||||||||||||||| |||||     
T  3918033 caattctttcaatcaattcaagaaagttgacattactatattgatataatttaattttttttttttggaatctttgaaagacaatattaagataaattta 3918132  T
Q  191 tctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||| ||||||| ||||| |||||||||| ||||||||||||||| | |||||||||||    
T  3918133 tcttgtaagcatattttcaactaaaatagaatttgttttgttatgagaattatcccaa 3918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 1424877 - 1424739
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||| ||| |||| | |||||| |||||||||||||||||||||| ||  |||||    
T  1424877 atcaattctagaaagttgacattactataacgatataatttaattttttggaacctttgatagacaacattaagattaatttctctagtaggcctatttt 1424778  T
Q  208 taactaaaatataatttgttttgttataaaattatcccaa 247  Q
     ||||||||||| |||| ||||||||||||||||||||||    
T  1424777 caactaaaatat-attttttttgttataaaattatcccaa 1424739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 93 - 247
Target Start/End: Complemental strand, 29714002 - 29713850
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttct 191  Q
    |||||||||  |||| |||||||||||||| |||||||||| |||||||||||||||| ||||||| |||  || |||||||| |||||||||||||||     
T  29714002 ttttgcaatcctttcaatcaattcaagaaatttgacattacaatattgatataatttatttttttggaaccatagaaagacaagattaagattaatttc- 29713904  T
Q  192 ctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
       ||| || |||||| |||||||||||||||||||||||||| |||||||||||||    
T  29713903 ---gtaggctcattttcaactaaaatataatttgttttgttatgaaaattatcccaa 29713850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 247
Target Start/End: Original strand, 11639915 - 11640052
Alignment:
Q  112 aattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaa 210  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||| ||| |||| |||||| |||||||| |||||||||| |||| |  |||||| ||    
T  11639915 aattcaagaaaattgacattactgtattgatataatttatttttttggaatctttgaaagactatattaaggttaatttctcaagtaggtccattttcaa 11640014  T
Q  211 ctaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    |||||||| ||||| ||||||||| |||||||||||||    
T  11640015 ctaaaataaaatttattttgttatgaaaattatcccaa 11640052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 12893235 - 12893104
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacattt 206  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||  |||  ||| ||||| || ||||| |||||||||||||||| |  |||||    
T  12893235 atcaattcaagaaagttgacattactatgttgatataatttattttttttggaatatttgaaagataagattaaaattaatttctctagtaggtccattt 12893136  T
Q  207 ttaactaaaatataatttgttttgttataaaa 238  Q
    | |||||||||| ||| |||||| ||||||||    
T  12893135 tcaactaaaatagaatatgttttcttataaaa 12893104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 1698588 - 1698478
Alignment:
Q  124 ttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataat 222  Q
    ||||||||||||||||||||||||||| ||| ||| || |||| |||||||| |||||||||||||| |||||||| |  ||||| |||| ||||| |||    
T  1698588 ttgacattactatattgatataatttattttcttggaatctttcaaagacaagattaagattaatttatctagtaaacctattttcaacttaaatagaat 1698489  T
Q  223 ttgttttgtta 233  Q
    |||||||||||    
T  1698488 ttgttttgtta 1698478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 16876826 - 16876928
Alignment:
Q  139 tgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttataaa 237  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||   |  ||||| ||||||||||| |||||||||||||||||    
T  16876826 tgatataatttaattttttgcaacattttaaagacaacattaagattaatttctctagttgacttattttcaactaaaatattatttgttttgttataaa 16876925  T
Q  238 att 240  Q
    |||    
T  16876926 att 16876928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 40145622 - 40145515
Alignment:
Q  134 tatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgtt 232  Q
    |||| ||||||||||||||| |||| ||| ||||||| |||| |||||||||||||| |||| ||  |  ||||| ||||||||||||||||||||||||    
T  40145622 tataatgatataatttaattctttggaacatttaaaaaacaacattaagattaatttttctattagacttattttgaactaaaatataatttgttttgtt 40145523  T
Q  233 ataaaatt 240  Q
    ||||||||    
T  40145522 ataaaatt 40145515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 53472311 - 53472169
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataattta---attttttgaaac-tttaaaagacaatattaagattaatttctctagtaag 199  Q
    |||| ||||||||||||||||| |||| | |||||||||||||||||   |||||||| ||| ||| ||| |||  |||||||||||||| | ||||| |    
T  53472311 tttcaatcaattcaagaaagtt-acat-attatattgatataatttatttattttttggaacctttgaaatacatgattaagattaatttatgtagtagg 53472214  T
Q  200 cacatttttaactaaaatataatttgttttgtta-taaaattatc 243  Q
    | |||||| ||||||||||||||||||||||||| ||||||||||    
T  53472213 ctcattttcaactaaaatataatttgttttgttattaaaattatc 53472169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 4127703 - 4127587
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||| |||| |||||||| |||||||||||||||| ||| || |  |||||    
T  4127703 atcaattcaagaaagttgacattactatattgatata----tgttttttgaaacctttgaaagacaagattaagattaatttctgtagcaatctaatttt 4127608  T
Q  208 taactaaaatataatttgttt 228  Q
     |||||||| ||| |||||||    
T  4127607 caactaaaaaatactttgttt 4127587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 10992979 - 10993129
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttc 190  Q
    |||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||  |||   |  |||||||| | ||| |||||||||    
T  10992979 ttttgcaatcctttcaatcaattcaagaaagttgacattacaatattgatataatttatttttttgggaagggtagaaagacaagaataaaattaatttc 10993078  T
Q  191 tctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
        ||| || |||||| |||||||||  ||||||||||||||| ||||||||||    
T  10993079 ----gtaggctcattttcaactaaaatgaaatttgttttgttatgaaaattatcc 10993129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 23044836 - 23044956
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| ||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  23044836 attactatattgatataattaatttattttggatactttcaagg-caagattaagattaatttctccagtaggcccattttcaactaaaatataatttgt 23044934  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    |||||||| |||||| ||||||    
T  23044935 tttgttatgaaaattctcccaa 23044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 6024705 - 6024811
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || |||||||||| ||| |||||||||||||| ||||||| || ||||||  |||||||||| ||||||    
T  6024705 attactatattgatataattaatttattttggatactttaaaag-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgt 6024803  T
Q  227 tttgttat 234  Q
    ||||||||    
T  6024804 tttgttat 6024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 31884896 - 31885002
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| |||||||||||||||||||||| || |||||| |||||||||||||||| |    
T  31884896 attactatattgatataattaatttattttagatactttcaagg-caagattaagattaatttctctagtatgcccattttcaactaaaatataatttat 31884994  T
Q  227 tttgttat 234  Q
    ||||||||    
T  31884995 tttgttat 31885002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 10994164 - 10994209
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||||    
T  10994164 attttcaactaaaatataatttgctttgttatgaaaattatcccaa 10994209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 46947565 - 46947524
Alignment:
Q  117 aagaaagttgacattactatattgatataatttaattttttg 158  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  46947565 aagaaagttgccactactatattaatataatttaattttttg 46947524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 98255 - 98396
Alignment:
Q  94 tttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaatttctc 192  Q
    ||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| ||| |||| |||||||| |||||||||||||||||    
T  98255 tttgcaatcctttcgatcaattcaagaaatttgacattaatatattgatataatttatttttttggaatctttgaaagacaagattaagattaatttctc 98354  T
Q  193 tagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||| | || |||||| |||||||||| ||||| |||| ||||    
T  98355 tagcatgctcattttcaactaaaatagaatttattttattat 98396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 21343 - 21500
Alignment:
Q  98 caattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-------gaaactttaaaagacaatattaagattaatttc 190  Q
    ||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||       ||| |||| ||||||||||||||||| |||||     
T  21343 caattctttcaatcaattcaagaaagttcacattaatatattgatataatttaatttttttttttgggaatctttgaaagacaatattaagataaattta 21442  T
Q  191 tctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||| ||||||| |||||||||||||||| ||||| ||||||||| | |||||||||||    
T  21443 tcttgtaagcatatttttaactaaaatagaatttattttgttatgagaattatcccaa 21500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 18519 - 18649
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||| || |||| |||||| | ||||||||||| || ||||||| || ||||||    
T  18519 atcaattcaagaaatttgacattacaatattgatataatttatttttttggaatctttgaaagactagattaagattaagttttctagtaggctcatttt 18618  T
Q  208 taactaaaatataatttgttttgttataaaa 238  Q
     |||||||||| |||||||||||||||||||    
T  18619 caactaaaataaaatttgttttgttataaaa 18649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 11680772 - 11680917
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||||||||||||||||||||| ||||||||| | ||||| || |||||||| ||| ||||| || |||||||||||||| ||||||| |  |    
T  11680772 tttcaatcaattcaagaaagttgacattattatattgatgtgatttatttgtttgaaacctttgaaagataagattaagattaatttttctagtaggttc 11680871  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||    
T  11680872 attttcaactaaaatataatttgttttgttatgaaaattattccaa 11680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 26817554 - 26817421
Alignment:
Q  96 tgcaattatttcgatcaattcaagaaagttgacattactatattgatataa--tttaattttttgaaactttaaaagacaatattaagattaatttctct 193  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||| ||  |||  ||||| ||| |||| |||||||| ||||||||||||||||||    
T  26817554 tgcaatcatttcaatcaattcaagaaagttaacattactatattgataaaaaatttgttttttggaatctttgaaagacaagattaagattaatttctct 26817455  T
Q  194 agtaagcacatttttaactaaaatataatttgtt 227  Q
    |||| ||  ||||| |||||||||| ||||||||    
T  26817454 agtatgcctattttcaactaaaatagaatttgtt 26817421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 19108121 - 19107980
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||| ||||| || |||||||||||||||    | | || |    
T  19108121 tttcaatcaattcaagaaagttgacattacaatattgaaataatttatttttttgaaaccttacaaagagaagattaagattaatttc----ggatgctc 19108026  T
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    ||||| ||||||||||||  || ||||||| | |||||||||||||    
T  19108025 attttcaactaaaatatatatttttttgttttgaaaattatcccaa 19107980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 33516566 - 33516686
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || || || |||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  33516566 attactatattgatataattaatttattttggatactttcaagga-aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgt 33516664  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    |||||||| |||||| ||||||    
T  33516665 tttgttatgaaaattctcccaa 33516686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 3229105 - 3229254
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttct 191  Q
    |||||||||  |||| || ||||||||||| |||||||||| |||||||||||||||| ||||||| ||| ||| |||||||  |||||||||||||||     
T  3229105 ttttgcaatcctttcaattaattcaagaaatttgacattacaatattgatataatttatttttttggaaccttagaaagacacgattaagattaatttc- 3229203  T
Q  192 ctagtaagcacatttttaactaaaatataatttgttttgttat-aaaattatcc 244  Q
       ||| ||  ||||| |||||  | ||||||||||||||||| ||||||||||    
T  3229204 ---gtaggctaattttcaactaggaaataatttgttttgttatgaaaattatcc 3229254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 14677902 - 14677787
Alignment:
Q  120 aaagttgacattactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaat 217  Q
    |||||| | |||||||||||||||||||| | || |||  || |||||||| | |||||||||||||||||| |||| || || |||||| |||||||||    
T  14677902 aaagtttatattactatattgatataattaatttatttatgatactttaaagg-caatattaagattaatttttctaataggcccattttcaactaaaat 14677804  T
Q  218 ataatttgttttgttat 234  Q
    || ||||||||||||||    
T  14677803 attatttgttttgttat 14677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 22524902 - 22524816
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagacaatattaagattaattt 189  Q
    |||| |||||||||||||||||| ||| || ||| |||||||||||| |||||| ||| ||| ||||||||| ||||||||| ||||    
T  22524902 tttcaatcaattcaagaaagttgtcatcacaataatgatataatttatttttttggaaccttaaaaagacaagattaagattcattt 22524816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 31129925 - 31129789
Alignment:
Q  108 gatcaattcaagaaagttgacattactatattgatataatttaattttttgaaacttta-aaagacaatattaagattaatttctctagtaagcacattt 206  Q
    ||||||||||||||||||| ||| || ||||| |||||||||| ||||||||||| | | ||| | || |||||||||||||||     ||  | |||||    
T  31129925 gatcaattcaagaaagttgtcatcacaatattaatataatttatttttttgaaacctgagaaatataagattaagattaatttc----atagactcattt 31129830  T
Q  207 ttaactaaaatataatttgttttgttat-aaaattatcccaa 247  Q
    | ||||||||| ||| |||||||||||| |||||||||||||    
T  31129829 tcaactaaaatgtaa-ttgttttgttatgaaaattatcccaa 31129789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 4065504 - 4065633
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaa-actttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||||| || |||||||||||||| | |||| |||||||||| ||||| | | | | | || || || ||||||||| ||||||| |||| || |    
T  4065504 tttcaatcaatccatgaaagttgacattattgtattaatataatttattttttaggatagtcttaagga-aagattaagatttatttctcaagta-gctc 4065601  T
Q  203 atttttaactaaaatataatttgttttgttat 234  Q
    ||||| ||||||||||| ||||||||||||||    
T  4065602 attttcaactaaaatatcatttgttttgttat 4065633  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 12269505 - 12269458
Alignment:
Q  185 aatttctctagtaagcacatttttaactaaaatataatttgttttgtt 232  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||||    
T  12269505 aatttctctagtagacttatttttaactaaaatataatttgttttgtt 12269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 4090710 - 4090763
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt 157  Q
    |||| ||||||| ||||||||||||| || |||||| |||||||||| ||||||    
T  4090710 tttcaatcaatttaagaaagttgacactattatattaatataatttattttttt 4090763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 15060255 - 15060214
Alignment:
Q  203 atttttaactaaaatataatttgttttgttat-aaaattatc 243  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  15060255 atttttaactaaaatagaatttgttttgttatgaaaattatc 15060214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 13758758 - 13758837
Alignment:
Q  167 aaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttataaaattatcccaa 247  Q
    |||||||| |||||||||||||||| ||||| || |||||| |||| ||| ||| ||| |||| || | ||||||||||||    
T  13758758 aaagacaagattaagattaatttctatagtaggctcattttcaacttaaa-atagttttttttttttttaaattatcccaa 13758837  T

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Target: scaffold1364 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 234
Target Start/End: Complemental strand, 1047 - 902
Alignment:
Q  94 tttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaatttttt-gaaactttaaaagac----aatattaagattaatt 188  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||| ||||||     |||||||||||||||    
T  1047 tttgcaatcatttcaatcaattcaagaaatttgacattactatattgatataatttatttttttggaatctttgaaagactatatatattaagattaatt 948  T
Q  189 tctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||||  ||| || |||||| |||||||||| |||||||||||||||    
T  947 tctcaggtaggctcattttcaactaaaatagaatttgttttgttat 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 1497 - 1371
Alignment:
Q  109 atcaattcaagaaagttgacattactatattgatataatttaattttttgaaa-ctttaaaagacaatattaagattaatttctctagtaagcacatttt 207  Q
    |||||||||||||| |||||||||| |||||||||||||||| | ||||| || |||| |||||| | ||||||||||| || ||||||| || ||||||    
T  1497 atcaattcaagaaatttgacattacaatattgatataatttattattttggaatctttgaaagactagattaagattaagttttctagtaggctcatttt 1398  T
Q  208 taactaaaatataatttgttttgttat 234  Q
     |||||||||| |||||||||||||||    
T  1397 caactaaaatagaatttgttttgttat 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 231
Target Start/End: Complemental strand, 25307 - 25179
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttt-ttgaaactttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||| |||| | ||| |||| |||||||| |||| |||||| ||||||| || ||      
T  25307 tttcaatcatttcaagaaagttgacattaatatattgatataatttatttttatggaacctttgaaagacaagattaggattaacttctctaatatgcca 25208  T
Q  203 atttttaactaaaatataatttgttttgt 231  Q
    ||||| ||||||||| ||||||| |||||    
T  25207 attttcaactaaaatttaatttggtttgt 25179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 60441 - 60584
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaattttttgaaac-tttaaaagacaatattaagattaatttctctagtaagcac 202  Q
    |||| ||||||| |||||| || |||||||||||||||||||||||  ||||| ||||| ||| ||| ||||||||||||||||||| | ||||| |  |    
T  60441 tttcaatcaatttaagaaa-ttaacattactatattgatataatttcttttttggaaaccttttaaaaacaatattaagattaatttttttagtatgtcc 60539  T
Q  203 atttttaactaaaat---ataatttgttttgttat-aaaattatc 243  Q
    ||||| |||||||||   ||||||||||||||||| |||||||||    
T  60540 attttcaactaaaatataataatttgttttgttatgaaaattatc 60584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 2393 - 2475
Alignment:
Q  152 ttttttgaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
    ||||| |||||||| |||||||| |||||||||||||||| || || |  |||||| ||||||||||||||||||||||||||    
T  2393 tttttggaaactttgaaagacaagattaagattaatttctataataggttcattttcaactaaaatataatttgttttgttat 2475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 1155 - 1206
Alignment:
Q  104 tttcgatcaattcaagaaagttgacattactatattgatataatttaatttt 155  Q
    |||| ||||||||||||||||||||||||||||||| || ||||||| ||||    
T  1155 tttcaatcaattcaagaaagttgacattactatattaatgtaatttattttt 1206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 41012 - 40874
Alignment:
Q  93 ttttgcaattatttcgatcaattcaagaaagttgacattactatattgatataatttaat-tttttgaaactttaaaagacaatattaagattaatttct 191  Q
    |||||||||  |||| | |||||||||||| |||||||||| |||||||||||||||| | ||||| || | |  |||||||| |||||||||||||       
T  41012 ttttgcaatgctttcaaccaattcaagaaatttgacattacaatattgatataatttagtattttttaaccatagaaagacaagattaagattaatt--- 40916  T
Q  192 ctagtaagcacatttttaactaaaatataatttgttttgttat 234  Q
     | |||  | |||||| ||||||||||||||||||||||||||    
T  40915 -ttgtagcctcattttcaactaaaatataatttgttttgttat 40874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 3243 - 3363
Alignment:
Q  129 attactatattgatataatttaatttttt--gaaactttaaaagacaatattaagattaatttctctagtaagcacatttttaactaaaatataatttgt 226  Q
    |||||||||||||||||||| | || |||  || ||||| || | ||| |||||| ||||||||||||||| ||  ||||| ||||||||||||||||||    
T  3243 attactatattgatataattaatttattttggatactttcaagg-caagattaagtttaatttctctagtaggccaattttcaactaaaatataatttgt 3341  T
Q  227 tttgttat-aaaattatcccaa 247  Q
    |||||||| |||||| ||||||    
T  3342 tttgttatgaaaattctcccaa 3363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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