View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18931_low_5 (Length: 250)
Name: NF18931_low_5
Description: NF18931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18931_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 3521747 - 3521986
Alignment:
| Q |
1 |
tcaaaatcatcattatttaattttattatatgaatttcatgatttattcactagtcatagaagtgattattttattgttaaaaaatcaagaaaaaagttg |
100 |
Q |
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| T |
3521747 |
tcaaaatcatcattatttaattttattatatgaatttcatgatttattcactagtcatagaagtgattattttattgttaaaaaatcaagaaaaaagttg |
3521846 |
T |
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| Q |
101 |
taattattaggttctgaattgtgtttttaattaattatgggttannnnnnnaattgtaggcgaaaagaataaaagaaagtatggaagagagtgggtttag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3521847 |
taattattaggttctgaattgtgtttttaattaattatgggttattttcttaattgtaggcgaaaagaataaaagaaagtatggaagagagtgggtttag |
3521946 |
T |
|
| Q |
201 |
ggttaatgaggttcatgatcatgaccaagatatatctgtg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
3521947 |
ggttaatgaggttcatgatcatgaccaagatatatctgtg |
3521986 |
T |
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