View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18932_low_14 (Length: 244)
Name: NF18932_low_14
Description: NF18932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18932_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 32440144 - 32440373
Alignment:
| Q |
1 |
agtatagttgtatacgacaatatctattcaatacacatagacatgacatctgatatttttaagataagttttaacatattaagtatgtgcaaaaaattga |
100 |
Q |
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|||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32440144 |
agtatagttgtataagacaatatctattcaatacacaaaaacatgacatctgatatttttaagataagttttaacatattaagtatgtgcaaaaaattga |
32440243 |
T |
|
| Q |
101 |
ttatcactagggttcacaacattggtgggtttaaaagaggactgtcttaccatttctgannnnnnncaacctctaacgttaacgagaagtgaaatgcaaa |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32440244 |
ttatcactagggttcacaacatttgtgggtttaaaagaggactgtcttgccatttctgatttttttcaacctctaacgttaacgagaagtgaaatgcaaa |
32440343 |
T |
|
| Q |
201 |
taacagaaaatgtacataacctaccatact |
230 |
Q |
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||||||||||||||||||||||| |||||| |
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| T |
32440344 |
taacagaaaatgtacataacctaacatact |
32440373 |
T |
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