View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18932_low_6 (Length: 420)
Name: NF18932_low_6
Description: NF18932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18932_low_6 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0038 (2 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 394; Significance: 0; HSPs: 40)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 31285344 - 31284943
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285344 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtgtacccctttattagtttccttatcaagaagcaatttcacttg |
31285245 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285244 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
31285145 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagtccaaacaacaacatgacaatcacattcatgtattgataattatattataaaattttcattgtt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285144 |
tattcatatctgttcatgttcaactagatatgttagtccaaacaacaacatgacaatcacattcatgtattgataattatattataaaattttcattgtt |
31285045 |
T |
|
| Q |
301 |
ttgagttataaaaaactaattctagtttaagaatatataaattgtggttcccatttaagctttaagattgaatgatttaggtacataaattaaaggcaaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285044 |
ttgagttataaaaaactaattctagtttaagaatatataaattgtggttcccatttaagctttaagattgaatgatttaggtacataaattaaaggcaaa |
31284945 |
T |
|
| Q |
401 |
ac |
402 |
Q |
| |
|
|| |
|
|
| T |
31284944 |
ac |
31284943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 26624056 - 26623664
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| | ||| ||||| |||||||| | || || | | ||||||||||| |||||||||| |
|
|
| T |
26624056 |
ttgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttg |
26623957 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |
|
|
| T |
26623956 |
ttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatca |
26623857 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagtccaaacaacaacatgacaatcacattcatgtattgataattatattataaaattttcattgtt |
300 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
26623856 |
tattcatatctgttcatgtccagctagatatgttagtagaaacatcaacatgacaataacattcatgtattaataattatattat-aaattttaattg-- |
26623760 |
T |
|
| Q |
301 |
ttgagttat-aaaaaactaattctagtttaagaatatataaattgtggttcccatttaagctttaagattgaatgatttaggtacataaattaaag |
395 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
26623759 |
ttgagttataaaaaaactaattttagtttaagaatatataaattgtttttcccatttaagctttaagattgaatgatttaggaatataaaataaag |
26623664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 26730033 - 26729641
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| | ||| ||||| |||||||| | || || | | ||||||||||| |||||||||| |
|
|
| T |
26730033 |
ttgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttg |
26729934 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |
|
|
| T |
26729933 |
ttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatca |
26729834 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagtccaaacaacaacatgacaatcacattcatgtattgataattatattataaaattttcattgtt |
300 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| |||| |
|
|
| T |
26729833 |
tattcatatctgttcatgtccagctagatatgttagtagaaacatcaacatgacaataacattcatgtattaataattatattat-aaattttaattg-- |
26729737 |
T |
|
| Q |
301 |
ttgagttat-aaaaaactaattctagtttaagaatatataaattgtggttcccatttaagctttaagattgaatgatttaggtacataaattaaag |
395 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
26729736 |
ttgagttataaaaaaactaattttagtttaagaatatataaattgtttttcccatttaagctttaagattgaatgatttaggaatataaaataaag |
26729641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 26803231 - 26802946
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| ||||||||| |
|
|
| T |
26803231 |
ttgctcttgcaagtgctgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttc |
26803132 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| | | ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| || | |
|
|
| T |
26803131 |
ttgtactcgagagtgcaatccaacagggtaattagcaacatgtaagggctgacgattgatcttgttggagatgtatttgactatctctccaatcaacttg |
26803032 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagtccaaac-aacaacatgacaatcacattcatgtattgataattatattata |
286 |
Q |
| |
|
||||||||||| ||||||| |||| ||||| |||||| || |||||||| |||||||||| |||||| | |||| ||||||||| |
|
|
| T |
26803031 |
tattcatatctattcatgtccaacaagataagttagtatgtactaacaacatcacaatcacatccatgtactcataa-tatattata |
26802946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28787023 - 28786805
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| | |||||||||||||||||| |||| || | || || | | | |||||||||| |||||||||| |
|
|
| T |
28787023 |
ttgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttg |
28786924 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
28786923 |
ttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaataaacttg |
28786824 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
28786823 |
tattcatatctattcatgt |
28786805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 27717896 - 27718114
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| |||||||||| |
|
|
| T |
27717896 |
ttgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttg |
27717995 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
27717996 |
ttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcg |
27718095 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
27718096 |
tattcatatctattcatgt |
27718114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 28793144 - 28792934
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| | |||||||||||||||||| |||| || | || || | | | |||||||||| |||||||||| |
|
|
| T |
28793144 |
ttgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttg |
28793045 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
28793044 |
ttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaataaacttg |
28792945 |
T |
|
| Q |
201 |
tattcatatct |
211 |
Q |
| |
|
||||||||||| |
|
|
| T |
28792944 |
tattcatatct |
28792934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 27427009 - 27427227
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| |||||||||| |
|
|
| T |
27427009 |
ttgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttg |
27427108 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | |||||||| || |
|
|
| T |
27427109 |
ttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataagctcg |
27427208 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
27427209 |
tattcatatctattcatgt |
27427227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27610517 - 27610734
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| ||||||||| |
|
|
| T |
27610517 |
ttgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttc |
27610616 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || ||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| |||||| |||| || |
|
|
| T |
27610617 |
ttgtacttgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggagatgtatttgactatctctccagtaaactcg |
27610716 |
T |
|
| Q |
201 |
tattcatatctgttcatg |
218 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
27610717 |
tattcatatctattcatg |
27610734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 27592426 - 27592654
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| | || || | | | |||||||||| ||||||||||||||| || |
|
|
| T |
27592426 |
gcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcacttgttgtactc |
27592525 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| ||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | |||||||| | |||||||| |
|
|
| T |
27592526 |
gagactgcaatccaacagggtaagtggcaacatttaagggctgtcgactgatcttgttggagatgtatttgactatctttccaataagcttgtattcata |
27592625 |
T |
|
| Q |
209 |
tctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||| ||||||| ||| ||||| |||||| |
|
|
| T |
27592626 |
tctattcatgtgcaataagataagttagt |
27592654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 27705801 - 27706037
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||| ||| ||| ||||| |||||||| | || || | ||| ||||||||| |||||||||| |
|
|
| T |
27705801 |
ttgctcttgcaagtgttgatttacccaagcctccaatgccaaaaattccaaccatatggaccccatcatcaggtccctcatcaagaagtgatttcacttg |
27705900 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||||||||||| | |||||||| | |
|
|
| T |
27705901 |
ttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggatgtcgactgatcttgttggagatgtatttgactatctttccaataagcttg |
27706000 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| |||||| |
|
|
| T |
27706001 |
tattcatatctattcatgtgcaataagataagttagt |
27706037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 26647256 - 26647028
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| || || ||| ||||||||||||||||||||||||| || || |
|
|
| T |
26647256 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26647157 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||| || |||||| | |||||||| | |||||||| |
|
|
| T |
26647156 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26647057 |
T |
|
| Q |
209 |
tctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||| ||||||| | || ||||| |||||| |
|
|
| T |
26647056 |
tctattcatgtcccacaagataagttagt |
26647028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 26753224 - 26752996
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| || || ||| ||||||||||||||||||||||||| || || |
|
|
| T |
26753224 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26753125 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||| || |||||| | |||||||| | |||||||| |
|
|
| T |
26753124 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26753025 |
T |
|
| Q |
209 |
tctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||| ||||||| | || ||||| |||||| |
|
|
| T |
26753024 |
tctattcatgtcccacaagataagttagt |
26752996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 27679731 - 27679499
Alignment:
| Q |
5 |
tcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgt |
104 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| || ||||||| ||| ||||| |||||||| | || | | ||| |||||||||| |||||||||||||| |
|
|
| T |
27679731 |
tcttgcaagtgttgatttccccaaacctccaatgccataaattccaaccatatggaccccatcatcggatccctcatcaagaagcgatttcacttgttgt |
27679632 |
T |
|
| Q |
105 |
attcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatatt |
204 |
Q |
| |
|
| |||| ||| ||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | |||||||| | |||| |
|
|
| T |
27679631 |
actcgagactgcaatccaacagggtaagtggcaacatgtaagggctgtcgactgatcttgttggagatgtatttgactatctttccaataagcttgtatt |
27679532 |
T |
|
| Q |
205 |
catatctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||||||| ||||||| ||| ||||| |||||| |
|
|
| T |
27679531 |
catatctattcatgtgcaataagataagttagt |
27679499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 27697983 - 27698193
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| | || || | | |||||||||| |||||||| |
|
|
| T |
27697983 |
ttgctcttgcaagtgttgattttcccaagcctccaatcccaaaaattccaaccatatggaccccatcatcagatccattatcaagaattgatttcactct |
27698082 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||| ||||||| | |
|
|
| T |
27698083 |
ttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttg |
27698182 |
T |
|
| Q |
201 |
tattcatatct |
211 |
Q |
| |
|
||||||||||| |
|
|
| T |
27698183 |
tattcatatct |
27698193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 26656742 - 26656532
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
||||||||||||||||||| |||||| | |||||||||||||||||| | ||| | | |||| | |||||||||||||||||||||||||||||| || |
|
|
| T |
26656742 |
gcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactc |
26656643 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||||||| | |||||||| |
|
|
| T |
26656642 |
gagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcata |
26656543 |
T |
|
| Q |
209 |
tctgttcatgt |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26656542 |
tctattcatgt |
26656532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 26762713 - 26762503
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
||||||||||||||||||| |||||| | |||||||||||||||||| | ||| | | |||| | |||||||||||||||||||||||||||||| || |
|
|
| T |
26762713 |
gcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactc |
26762614 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||||||| | |||||||| |
|
|
| T |
26762613 |
gagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcata |
26762514 |
T |
|
| Q |
209 |
tctgttcatgt |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26762513 |
tctattcatgt |
26762503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 28781877 - 28781668
Alignment:
| Q |
10 |
caagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttcctt-atcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||| ||| || |||| | | ||||| | |||||||| ||||||||||||||| || |
|
|
| T |
28781877 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatcctgactccattatca-tatccttcaccaagaagcgatttcacttgttgtactc |
28781779 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||| || |||||||| | |||||||| |
|
|
| T |
28781778 |
gggactgtaatccaacagggtaattggcaacatgtaagtgctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttgtattcata |
28781679 |
T |
|
| Q |
209 |
tctgttcatgt |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
28781678 |
tctattcatgt |
28781668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 27604101 - 27604337
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | ||||||||| |||||||||| |
|
|
| T |
27604101 |
ttgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagagatttcacttg |
27604200 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||| ||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||| ||||| | |||||||| || |
|
|
| T |
27604201 |
ttgtactcgagactgcaatccaataggataattggcaacatgtaagggctgacgactgatcttgttggagatttctttcactatctttccaataagctcg |
27604300 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| |||||| |
|
|
| T |
27604301 |
tattcatatctattcatgtccaataagataagttagt |
27604337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 27677025 - 27677253
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| | || || | | | |||||||||| |||||| |||||||| || |
|
|
| T |
27677025 |
gcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcatttgttgtactc |
27677124 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| ||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| | |||||||| | |||||||| |
|
|
| T |
27677125 |
gagactgcaatccaacagggtaagtggcaacatgtaagggttgttgactgatcttgttggagatgtatttgactatctttccaataagcttgtattcata |
27677224 |
T |
|
| Q |
209 |
tctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||| ||||||| ||| ||||| |||||| |
|
|
| T |
27677225 |
tctattcatgtgcaataagataagttagt |
27677253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 26884855 - 26884637
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||| | ||| |
|
|
| T |
26884855 |
ttgcttttgcaagtgttgatttacccaagcctccagtaccataaattcctaccatgtgtaccccttcgttagattccttatcaagaagcaattttaattg |
26884756 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| ||| ||| |||||||||||||| ||||| |||| ||| ||||||||||| |||| |||||| | || |||||| | || ||||| || |
|
|
| T |
26884755 |
ttgtactcggtactgtaatccaacagggtatttggctacatgtaaaacaacacgattgattttgtcggagatatcttcgactatcttcccgataaactcg |
26884656 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||| ||||| ||||||| |
|
|
| T |
26884655 |
tattcgtatctattcatgt |
26884637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 27530698 - 27530934
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| ||||||||||||||||||| | |||||| | |||||||||||||||||||||||| | | || || || | ||||||| || |||||| || |
|
|
| T |
27530698 |
ttgcttttgcaagtgttgatttacctatgcctccagtaccataaagtcctaccatgtggacctcatcatcagatttttcatcaagatgccctttcacatg |
27530797 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| ||| ||| ||||||||||| || |||||||||| ||||||| ||||| | ||| ||||||| |||| || |||||| | ||||||||| || |
|
|
| T |
27530798 |
ttgtactcgggactgtaatccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaatgtcttcgactatctttccaataaactcg |
27530897 |
T |
|
| Q |
201 |
tattcatatctgttcatgttcaactagatatgttagt |
237 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| |||||| |
|
|
| T |
27530898 |
tattcatatctattcatgtccaataagataagttagt |
27530934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26862365 - 26862230
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||| ||||||| || || |||| |||||||||||||||||||||| |
|
|
| T |
26862365 |
ttgcttttgcaagtgttgatttccccatgcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttg |
26862266 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggc |
136 |
Q |
| |
|
|| || ||| |||| |||||||||||||| ||||| |
|
|
| T |
26862265 |
ttctactcgggactttaatccaacagggtatttggc |
26862230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 27337492 - 27337630
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||| || || ||||| ||||||||||||||| ||||| |
|
|
| T |
27337492 |
ttgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttg |
27337591 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaac |
139 |
Q |
| |
|
||||| ||| ||| |||||||||||||| |||||||| |
|
|
| T |
27337592 |
ttgtactcgggactgtaatccaacagggtatttggcaac |
27337630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 27398232 - 27398370
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||| || || ||||| ||||||||||||||| ||||| |
|
|
| T |
27398232 |
ttgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttg |
27398331 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaac |
139 |
Q |
| |
|
||||| ||| ||| |||||||||||||| |||||||| |
|
|
| T |
27398332 |
ttgtactcgggactgtaatccaacagggtatttggcaac |
27398370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 25580506 - 25580235
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| | | | || || | ||||||||||||||||||||| |
|
|
| T |
25580506 |
tgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaatttcacttgt |
25580407 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcat |
201 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| ||| ||||||| ||||||||||||| || |||||| | ||||||| | | |
|
|
| T |
25580406 |
tctattcgggactgtaatccaacagggtatttggctacgtttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgt |
25580307 |
T |
|
| Q |
202 |
attcatatctgttcatgttcaactagatatgttagtccaaacaacaacatgacaatcacattcatgtattga |
273 |
Q |
| |
|
|||||||||| ||| ||| ||| ||||| ||||| || ||| || || | |||||||| |||||||||| |
|
|
| T |
25580306 |
attcatatctattcgtgtccaataagataagttagaacatacactaaaatcaaaatcacatccatgtattga |
25580235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26824604 - 26824437
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||| || || |||||||||||||| |||||| | | || || ||| ||||||||||| |||||||||| |
|
|
| T |
26824604 |
ttgcttttgcaagtgttgatttacctaaacctccaataccgtaaagtcctaccatatggaccacatcatcagattcgttatcaagaagagatttcacttg |
26824505 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttgg |
168 |
Q |
| |
|
||||| ||| ||| |||||||| ||||| |||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
26824504 |
ttgtactcgggactgtaatccaaccgggtatttggcaacatgtaaactaacacgattgatctggttgg |
26824437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 25539327 - 25539093
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | |||||||||||||||||| ||||| | | | || || ||||||||||||||||||||| |
|
|
| T |
25539327 |
tgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgt |
25539228 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcat |
201 |
Q |
| |
|
| |||| | ||| |||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||| | ||||||| | | |
|
|
| T |
25539227 |
tctattggggactgtaatccaacagggtatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgt |
25539128 |
T |
|
| Q |
202 |
attcatatctgttcatgttcaactagatatgttag |
236 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| ||||| |
|
|
| T |
25539127 |
attcatatctattcatgtccaataagataagttag |
25539093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 25492722 - 25492876
Alignment:
| Q |
7 |
ttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtat |
106 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||||||||||||||||||||| | | | | || | ||| ||| |||||||||||||| ||||||| |
|
|
| T |
25492722 |
ttgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgtggaactcatcctcagatacctcatctagaagcaatttcacgtgttgtac |
25492821 |
T |
|
| Q |
107 |
tcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatc |
161 |
Q |
| |
|
||| | | |||||||||||||| |||||||||| ||| | |||||||||||| |
|
|
| T |
25492822 |
tcgggattgtaatccaacagggtatttggcaacatgtaatgaaacacgattgatc |
25492876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27215237 - 27215131
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||||| ||| |||| | |||| |||||||||||||| ||||| |
|
|
| T |
27215237 |
ttgcttttgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttccttagatcccttgtcaagaagcaattttacttg |
27215138 |
T |
|
| Q |
101 |
ttgtatt |
107 |
Q |
| |
|
||||||| |
|
|
| T |
27215137 |
ttgtatt |
27215131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 26143652 - 26143435
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| |||||||||||||| ||||| | | | || || | ||||||||||||||||||| | |
|
|
| T |
26143652 |
tgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttct |
26143553 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcat |
201 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| |||| ||| ||| ||||||| ||||||||||||| || |||||| | ||||||| | | |
|
|
| T |
26143552 |
tctattcgggactgtaatccaacagggtatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgt |
26143453 |
T |
|
| Q |
202 |
attcatatctgttcatgt |
219 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
26143452 |
attcatatctattcatgt |
26143435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 26056706 - 26056535
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| ||| |||||||||| ||||| | || | || || | ||||||||||||||||||||| |
|
|
| T |
26056706 |
tgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgt |
26056607 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatg |
173 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| ||| |||||||||||||||||||| |
|
|
| T |
26056606 |
tctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatg |
26056535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 26076676 - 26076505
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| ||| |||||||||| ||||| | || | || || | ||||||||||||||||||||| |
|
|
| T |
26076676 |
tgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgt |
26076577 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatg |
173 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| ||| |||||||||||||||||||| |
|
|
| T |
26076576 |
tctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatg |
26076505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 25483843 - 25483661
Alignment:
| Q |
2 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| |||||||||||||| ||||| | | | || || | ||||||||||||||||||||| |
|
|
| T |
25483843 |
tgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgt |
25483744 |
T |
|
| Q |
102 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| || ||||||| |||||||||||||||| |||||| |
|
|
| T |
25483743 |
tctattcgggactgtaatccaacagggtatttggctacgtttaaaaaatcatgattgatattgttggagatgtattggactat |
25483661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 28297256 - 28297346
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
210 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||||||||||||||| |||| | |||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
28297256 |
ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc |
28297346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 28514817 - 28514727
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
210 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||||||||||||||| |||| | |||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
28514817 |
ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc |
28514727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 28181775 - 28181693
Alignment:
| Q |
128 |
gtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
210 |
Q |
| |
|
||||| |||||||||||| || |||| ||||||||| ||||| | |||||||||||| | | | ||||| ||||||||||||| |
|
|
| T |
28181775 |
gtaatcggcaacatataaaggaacacaattgatctttttggaaacgtatttgactatcttttcgataaactcatattcatatc |
28181693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 25511640 - 25511540
Alignment:
| Q |
84 |
agaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgacta |
183 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||||||||||||| ||||| || | || ||| ||||||||||||||||||||| || ||||| |
|
|
| T |
25511640 |
agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgttcaaaaaaacatgattgatcttgttggagatgtcttcgacta |
25511541 |
T |
|
| Q |
184 |
t |
184 |
Q |
| |
|
| |
|
|
| T |
25511540 |
t |
25511540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 28227618 - 28227554
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
||||||||||||| |||||||| ||| || ||| ||||||||||||| || || ||||||||||| |
|
|
| T |
28227618 |
ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactat |
28227554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 28235231 - 28235167
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
28235231 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgtttgatacatatttgactat |
28235167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 267737 - 267955
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||||||| | || || | | ||||||||||||||||||||||| |
|
|
| T |
267737 |
ttgctcttgcaagggttgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcagatccattatcaagaagcaatttcacttg |
267836 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || || ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
267837 |
ttgtacttgagaccataatccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggagatgtatttgactatctctccaataaacttg |
267936 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
267937 |
tattcatatctattcatgt |
267955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 28127072 - 28127251
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||| | | || | | ||||||| |||||||| |||||||| |
|
|
| T |
28127072 |
ttgcttttgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaaattcacttg |
28127171 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttga |
180 |
Q |
| |
|
||||| | | || ||||||||||| || |||||||||| |||| |||||||||||| ||| ||| |||| ||||| |
|
|
| T |
28127172 |
ttgtacttggtcctgtaatccaacaggatatttggcaacatgtaagaaaacacgattgatcctgtcggatatgtctttga |
28127251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 28163772 - 28163941
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | | || | | ||||||| ||||||||||||||||| |
|
|
| T |
28163772 |
ttgcttttgcaagtgttgatttacccaagcctccagtatcataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaatttcacttg |
28163871 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggag |
170 |
Q |
| |
|
||||| | || | | ||||||||||| || || ||||||| ||| |||||||||||| ||| |||| |
|
|
| T |
28163872 |
ttgtacttgagattgtaatccaacaggatattttgcaacatgtaaaaaaacacgattgatcctgtcggag |
28163941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8272 - 8054
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||| || | || || | | | |||||||||| ||||||| || |
|
|
| T |
8272 |
ttgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatg |
8173 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| || |||||||| | |
|
|
| T |
8172 |
ttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttg |
8073 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
8072 |
tattcatatctattcatgt |
8054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 2936 - 3154
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| |||||||||| |
|
|
| T |
2936 |
ttgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttg |
3035 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| |||| | ||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
3036 |
ttgtactcgagacttcattccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcg |
3135 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
3136 |
tattcatatctattcatgt |
3154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13072 - 13290
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||| || | || || | | | |||||||||| ||||||| || |
|
|
| T |
13072 |
ttgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatg |
13171 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| || |||||||| | |
|
|
| T |
13172 |
ttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttg |
13271 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
13272 |
tattcatatctattcatgt |
13290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 4109 - 4319
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||| | || | || || | | | |||||||||| ||||||| || |
|
|
| T |
4109 |
ttgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtgggctccatgatcagatccttcatcaagaagcgatttcacatg |
4208 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
4209 |
ttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgatgactgatcttgttggagatgttcttgactatctctccaataaacttg |
4308 |
T |
|
| Q |
201 |
tattcatatct |
211 |
Q |
| |
|
||||||||||| |
|
|
| T |
4309 |
tattcatatct |
4319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 60354 - 60136
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| |||||||||| |
|
|
| T |
60354 |
ttgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttg |
60255 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | |||||||| || |
|
|
| T |
60254 |
ttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataagctcg |
60155 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
60154 |
tattcatatctattcatgt |
60136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 18074546 - 18074328
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| |||||||||| |
|
|
| T |
18074546 |
ttgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttg |
18074447 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | |||||||| || |
|
|
| T |
18074446 |
ttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataagctcg |
18074347 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
18074346 |
tattcatatctattcatgt |
18074328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 18698801 - 18699011
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
||||||||||||||||||| |||||| || ||||||||||||| |||| |||| || | || || | | |||||||||||| |||||||||||||| || |
|
|
| T |
18698801 |
gcaagtgttgatttacccatgcctccaatgccataaagtcctaacatgcggactccatcatcagatcctttatcaagaagcgctttcacttgttgtactc |
18698900 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||| ||||||||||| | |||||||| |
|
|
| T |
18698901 |
gagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagacgtatttgactatatctccaataaacttgtattcata |
18699000 |
T |
|
| Q |
209 |
tctgttcatgt |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
18699001 |
tctattcatgt |
18699011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 18678953 - 18679171
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||||| || |||||||||||||||||| |||| || | || || | | |||||||||| |||||||||| |
|
|
| T |
18678953 |
ttgcttttgcaagtgttaatttacccatgcctccaatgccataaagtcctaccatgcggactccatcataagatcattcatcaagaagcgatttcacttg |
18679052 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||||| ||||||| ||| |||||||||| |||| |||||||||||| ||||||||||| | |
|
|
| T |
18679053 |
ttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgccgactgatcttgttagagacgtatttgactatctctccaataaacttg |
18679152 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
18679153 |
tattcatatctattcatgt |
18679171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 18654876 - 18655088
Alignment:
| Q |
7 |
ttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtat |
106 |
Q |
| |
|
|||||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || || || | | |||||||||||| ||||||||||||||| |
|
|
| T |
18654876 |
ttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatcagatcctttatcaagaagcgatttcacttgttgtac |
18654975 |
T |
|
| Q |
107 |
tcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattca |
206 |
Q |
| |
|
|||| ||| || |||||||||||| ||||| ||| ||||||| |||| ||||||||||||||| ||||||||||| | ||||||||| | |||||| |
|
|
| T |
18654976 |
tcgagactgcaacccaacagggtaactggcagcatgtaagggctgacgactgatcttgttggagacatatttgactatctttccaataaacttgtattca |
18655075 |
T |
|
| Q |
207 |
tatctgttcatgt |
219 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
18655076 |
tatctattcatgt |
18655088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 18723484 - 18723696
Alignment:
| Q |
7 |
ttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtat |
106 |
Q |
| |
|
|||||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || ||||| | | |||||||||||| ||||||||||||||| |
|
|
| T |
18723484 |
ttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccattagatcctttatcaagaagcgatttcacttgttgtac |
18723583 |
T |
|
| Q |
107 |
tcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattca |
206 |
Q |
| |
|
|||| ||| || |||||||||||| ||||||||| ||||||| |||| ||||||||||| || ||||||||||| | ||||||||| | |||||| |
|
|
| T |
18723584 |
tcgagactgcaacccaacagggtaagtggcaacatgtaagggctgacgactgatcttgttgttgacatatttgactatctttccaataaacttgtattca |
18723683 |
T |
|
| Q |
207 |
tatctgttcatgt |
219 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
18723684 |
tatctattcatgt |
18723696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 18730905 - 18731115
Alignment:
| Q |
9 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
108 |
Q |
| |
|
|||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || || || | | |||||||||||| ||||||||||||||| || |
|
|
| T |
18730905 |
gcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccataagatcctttatcaagaagcgatttcacttgttgtactc |
18731004 |
T |
|
| Q |
109 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
208 |
Q |
| |
|
|| ||| || |||||||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||||||||| | | ||||||| | |||||||| |
|
|
| T |
18731005 |
gagactgcaacccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggagacatatttgactatcttttcaataaacttgtattcata |
18731104 |
T |
|
| Q |
209 |
tctgttcatgt |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
18731105 |
tctattcatgt |
18731115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 29273235 - 29273453
Alignment:
| Q |
1 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || |||||||||| ||| ||||| |||| ||| | || || | | |||||||||||| |||| ||||| |
|
|
| T |
29273235 |
ttgctcttgcaagggttgatttacccaagccaccaatcccataaattccaaccatatggatcccatcatcagatccattatcaagaagcgatttgacttg |
29273334 |
T |
|
| Q |
101 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatca |
200 |
Q |
| |
|
||||| | || ||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
29273335 |
ttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttg |
29273434 |
T |
|
| Q |
201 |
tattcatatctgttcatgt |
219 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
29273435 |
tattcatatctattcatgt |
29273453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 28116 - 28052
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
||||||||||||| |||||||| ||| || ||| ||||||||||||| || || ||||||||||| |
|
|
| T |
28116 |
ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactat |
28052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 35393 - 35329
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
35393 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgtttgatacatatttgactat |
35329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 57810 - 57874
Alignment:
| Q |
120 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
184 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
57810 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgttagatacatatttgactat |
57874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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