View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18933_high_3 (Length: 279)
Name: NF18933_high_3
Description: NF18933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18933_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 2007975 - 2007717
Alignment:
| Q |
1 |
acaaatctaaccaatatttatatatcattatacattttaacaaaacttttttagtttaatataaatgtttccataaccaaagttttctatgaatacatac |
100 |
Q |
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| T |
2007975 |
acaaatctaaccaatatttatatatcattatacattttaacaaaacttttttagtttaatataaatgtttccataactaaagttctctatgaatacatac |
2007876 |
T |
|
| Q |
101 |
attttcctctccacattagaggtgtctactaacatggtgctaaataggtgaaacatacaccaatgcaaatgtgatctaaacactattaataaatataatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |
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| T |
2007875 |
cttttcctctccacattagaggtgtctactaacatggtgctaaataggtgaaacgtacaccaatgcaaatgtgacctaaacactattaatgaatataatt |
2007776 |
T |
|
| Q |
201 |
tatgaattatttaatatttgtcttaaagattaagttggtaaagactaaatatgttgcct |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2007775 |
tatgaattatttaatatttgtcttaaagattaagttggtaaagactaaatatgttgcct |
2007717 |
T |
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