View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18934_low_10 (Length: 500)
Name: NF18934_low_10
Description: NF18934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18934_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 472; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 11 - 482
Target Start/End: Original strand, 33016759 - 33017230
Alignment:
| Q |
11 |
atcatcatcgaaaaaaggtggctaatagaaggcgtacctcgatggattttggacctatgaatagctccttgtgaaactctatgcttgataagacagagat |
110 |
Q |
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| T |
33016759 |
atcatcatcgaaaaaaggtggctaatagaaggcgtacctcgatggattttggacctatgaatagctccttgtgaaactctatgcttgataagacagagat |
33016858 |
T |
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| Q |
111 |
gttctttgcacatatgatatagaggtaaggcacttcatttggaaaatcggaccaactgcttcattattgaggcagacgttgtagttgacagaggtcacac |
210 |
Q |
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| T |
33016859 |
gttctttgcacatatgatatagaggtaaggcacttcatttggaaaatcggaccaactgcttcattattgaggcagacgttgtagttgacagaggtcacac |
33016958 |
T |
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| Q |
211 |
ataaccaaacaaatccatttattcattgattggagaagcctgcctttgacataacatctgagaggtatcgcccatcaacttgatcaaaagcttttgatta |
310 |
Q |
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| T |
33016959 |
ataaccaaacaaatccatttattcattgattggagaagcctgcctttgacataacatctgagaggtatcgcccatcaacttgatcaaaagcttttgatta |
33017058 |
T |
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| Q |
311 |
tgtcaagcttcagaactacatcaccaatacagccctgagatttagatttcatgtagtgaattatttcaaaagcaacaagcgcattatcgagaatggttct |
410 |
Q |
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| T |
33017059 |
tgtcaagcttcagaactacatcaccaatacagccctgagatttagatttcatgtagtgaattatttcaaaagcaacaagcgcattatcgagaatggttct |
33017158 |
T |
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| Q |
411 |
acctcggacaaaagccgcttgctctagagttataaacatggcgagaagaggttttaatctgtttgacaatac |
482 |
Q |
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| T |
33017159 |
acctcggacaaaagccgcttgctctagagttataaacatggcgagaagaggttttaatctgtttgacaatac |
33017230 |
T |
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