View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18934_low_23 (Length: 272)

Name: NF18934_low_23
Description: NF18934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18934_low_23
NF18934_low_23
[»] chr7 (41 HSPs)
chr7 (147-267)||(42628310-42628430)
chr7 (147-256)||(11016895-11017004)
chr7 (147-244)||(4290583-4290680)
chr7 (168-267)||(29053338-29053437)
chr7 (163-256)||(15027568-15027661)
chr7 (147-244)||(38975843-38975940)
chr7 (168-267)||(4649335-4649436)
chr7 (170-256)||(41018254-41018340)
chr7 (150-250)||(48000769-48000869)
chr7 (182-258)||(7671949-7672025)
chr7 (168-256)||(34854719-34854807)
chr7 (176-256)||(27028825-27028905)
chr7 (147-219)||(48000697-48000769)
chr7 (147-244)||(41945893-41945990)
chr7 (147-267)||(34854710-34854830)
chr7 (147-202)||(4290548-4290603)
chr7 (147-206)||(11016872-11016931)
chr7 (147-206)||(38975808-38975867)
chr7 (147-203)||(45231929-45231985)
chr7 (197-256)||(22764753-22764812)
chr7 (147-206)||(27028731-27028790)
chr7 (147-203)||(41018307-41018363)
chr7 (184-255)||(10419485-10419556)
chr7 (147-206)||(27028869-27028928)
chr7 (202-256)||(45231908-45231962)
chr7 (230-267)||(45231869-45231906)
chr7 (162-206)||(22764776-22764820)
chr7 (220-267)||(29053329-29053376)
chr7 (220-267)||(41018243-41018290)
chr7 (220-256)||(15027618-15027654)
chr7 (194-254)||(30217504-30217564)
chr7 (161-197)||(43500001-43500037)
chr7 (220-256)||(48000720-48000756)
chr7 (220-259)||(7671934-7671973)
chr7 (226-256)||(48000819-48000849)
chr7 (141-170)||(25001391-25001420)
chr7 (215-256)||(27028754-27028795)
chr7 (162-211)||(35303250-35303299)
chr7 (147-219)||(6225529-6225600)
chr7 (220-256)||(11016945-11016981)
chr7 (223-267)||(27028808-27028852)
[»] chr4 (60 HSPs)
chr4 (147-267)||(42375025-42375145)
chr4 (141-256)||(47661868-47661983)
chr4 (141-256)||(23444266-23444381)
chr4 (147-256)||(6271728-6271837)
chr4 (147-256)||(51265471-51265580)
chr4 (147-261)||(53954631-53954745)
chr4 (170-267)||(47404611-47404708)
chr4 (168-267)||(40789194-40789293)
chr4 (171-267)||(55090023-55090119)
chr4 (147-256)||(35682192-35682301)
chr4 (170-267)||(52028564-52028661)
chr4 (156-255)||(47762635-47762734)
chr4 (193-256)||(30861823-30861886)
chr4 (158-232)||(25818387-25818461)
chr4 (170-254)||(26186042-26186124)
chr4 (141-253)||(44379959-44380071)
chr4 (182-267)||(31430499-31430581)
chr4 (170-232)||(50384131-50384193)
chr4 (148-267)||(38714838-38714957)
chr4 (140-206)||(23444345-23444411)
chr4 (170-267)||(24006096-24006185)
chr4 (147-206)||(3862622-3862681)
chr4 (147-206)||(3871379-3871438)
chr4 (147-206)||(51265448-51265507)
chr4 (171-256)||(31532716-31532801)
chr4 (180-232)||(45591446-45591498)
chr4 (147-206)||(6271705-6271764)
chr4 (223-267)||(31430476-31430520)
chr4 (147-206)||(26186090-26186149)
chr4 (147-206)||(30861850-30861909)
chr4 (220-267)||(50384120-50384167)
chr4 (148-198)||(5048884-5048934)
chr4 (147-196)||(30709986-30710035)
chr4 (158-206)||(47661856-47661904)
chr4 (217-256)||(3862619-3862658)
chr4 (217-256)||(3871376-3871415)
chr4 (220-267)||(24006085-24006132)
chr4 (182-229)||(28693961-28694008)
chr4 (147-206)||(35682169-35682228)
chr4 (220-267)||(47404600-47404647)
chr4 (220-267)||(52028625-52028672)
chr4 (129-190)||(19184488-19184549)
chr4 (137-170)||(54716351-54716384)
chr4 (220-256)||(23444295-23444331)
chr4 (148-204)||(44379934-44379990)
chr4 (220-256)||(47661918-47661954)
chr4 (220-267)||(40789255-40789302)
chr4 (220-267)||(55090011-55090058)
chr4 (171-206)||(55090072-55090107)
chr4 (221-259)||(17285807-17285845)
chr4 (146-219)||(49469911-49469983)
chr4 (220-256)||(6271778-6271814)
chr4 (161-197)||(31846896-31846932)
chr4 (220-256)||(35682242-35682278)
chr4 (162-198)||(41306636-41306672)
chr4 (170-206)||(42375036-42375072)
chr4 (220-256)||(42375086-42375122)
chr4 (136-200)||(47762600-47762664)
chr4 (220-256)||(51265521-51265557)
chr4 (235-267)||(54716364-54716396)
[»] chr2 (37 HSPs)
chr2 (147-267)||(38933602-38933722)
chr2 (147-267)||(6217227-6217347)
chr2 (147-267)||(14229356-14229475)
chr2 (147-256)||(6721977-6722086)
chr2 (147-256)||(16514450-16514559)
chr2 (154-267)||(29925580-29925693)
chr2 (147-266)||(37961722-37961841)
chr2 (147-256)||(29508693-29508803)
chr2 (170-267)||(2828599-2828696)
chr2 (176-267)||(2893978-2894069)
chr2 (134-245)||(14470582-14470693)
chr2 (147-252)||(24115950-24116055)
chr2 (171-256)||(15011306-15011391)
chr2 (143-207)||(33018620-33018684)
chr2 (141-245)||(14892298-14892401)
chr2 (147-205)||(9173058-9173116)
chr2 (130-255)||(1945398-1945517)
chr2 (182-244)||(37762039-37762101)
chr2 (134-215)||(32545855-32545936)
chr2 (172-254)||(8534174-8534256)
chr2 (147-206)||(16514427-16514486)
chr2 (147-206)||(29508767-29508826)
chr2 (170-256)||(9173007-9173093)
chr2 (158-206)||(15011294-15011342)
chr2 (220-267)||(15011356-15011403)
chr2 (147-198)||(32545789-32545840)
chr2 (220-255)||(37961782-37961817)
chr2 (215-267)||(2143943-2143995)
chr2 (223-263)||(2828663-2828703)
chr2 (220-256)||(6217250-6217286)
chr2 (171-211)||(14464582-14464622)
chr2 (220-256)||(16514500-16514536)
chr2 (220-264)||(37762019-37762063)
chr2 (133-206)||(24115909-24115982)
chr2 (220-256)||(29508716-29508753)
chr2 (158-206)||(6721965-6722013)
chr2 (162-206)||(37762077-37762121)
[»] chr6 (23 HSPs)
chr6 (143-267)||(24618600-24618724)
chr6 (150-267)||(12343115-12343232)
chr6 (170-256)||(551191-551277)
chr6 (168-267)||(10521873-10521972)
chr6 (147-256)||(17750928-17751037)
chr6 (141-237)||(13043502-13043598)
chr6 (170-267)||(2315330-2315427)
chr6 (202-265)||(31654322-31654385)
chr6 (147-206)||(24587464-24587523)
chr6 (185-255)||(24587488-24587558)
chr6 (147-207)||(24975755-24975815)
chr6 (132-205)||(17750891-17750963)
chr6 (140-206)||(551241-551307)
chr6 (220-266)||(551181-551227)
chr6 (223-267)||(10521864-10521908)
chr6 (140-180)||(13043444-13043484)
chr6 (220-261)||(2315325-2315366)
chr6 (147-208)||(7384491-7384552)
chr6 (161-206)||(13043474-13043519)
chr6 (220-256)||(12343176-12343212)
chr6 (239-267)||(13766753-13766781)
chr6 (220-256)||(24975778-24975814)
chr6 (170-206)||(31654331-31654367)
[»] chr5 (49 HSPs)
chr5 (147-267)||(3899854-3899974)
chr5 (147-267)||(16971159-16971279)
chr5 (135-256)||(12913829-12913950)
chr5 (147-256)||(29699393-29699502)
chr5 (140-267)||(28818932-28819059)
chr5 (147-256)||(19655184-19655293)
chr5 (147-256)||(291123-291232)
chr5 (147-267)||(26662414-26662535)
chr5 (147-267)||(26934009-26934130)
chr5 (147-232)||(2953240-2953325)
chr5 (147-267)||(2093940-2094060)
chr5 (141-244)||(30117825-30117928)
chr5 (170-256)||(16439164-16439250)
chr5 (175-267)||(38134404-38134496)
chr5 (170-256)||(3180086-3180172)
chr5 (143-205)||(291096-291158)
chr5 (182-256)||(19598358-19598431)
chr5 (147-267)||(2356290-2356406)
chr5 (182-259)||(16802467-16802544)
chr5 (148-206)||(30117904-30117962)
chr5 (158-209)||(7009401-7009452)
chr5 (152-267)||(16439146-16439261)
chr5 (147-206)||(19598335-19598394)
chr5 (147-206)||(19655161-19655220)
chr5 (148-224)||(228408-228484)
chr5 (147-206)||(1638460-1638519)
chr5 (147-206)||(12913806-12913865)
chr5 (147-201)||(13312267-13312321)
chr5 (147-201)||(32485630-32485684)
chr5 (183-255)||(2935869-2935941)
chr5 (150-206)||(3180136-3180191)
chr5 (158-206)||(29699381-29699429)
chr5 (220-256)||(3899915-3899951)
chr5 (221-265)||(16802521-16802565)
chr5 (220-256)||(16971220-16971256)
chr5 (158-206)||(17849221-17849269)
chr5 (220-267)||(3180075-3180122)
chr5 (136-191)||(39031242-39031297)
chr5 (147-217)||(11983259-11983328)
chr5 (147-201)||(22083095-22083149)
chr5 (144-190)||(31147137-31147183)
chr5 (172-206)||(38134449-38134483)
chr5 (174-232)||(7005218-7005274)
chr5 (220-256)||(2953266-2953302)
chr5 (183-215)||(14167191-14167223)
chr5 (220-256)||(19655234-19655270)
chr5 (220-256)||(29699443-29699479)
chr5 (183-215)||(37325597-37325629)
chr5 (147-179)||(39777054-39777086)
[»] chr8 (39 HSPs)
chr8 (147-256)||(5033187-5033296)
chr8 (134-267)||(6296620-6296753)
chr8 (147-256)||(33841594-33841703)
chr8 (147-256)||(35440972-35441081)
chr8 (148-265)||(39850972-39851089)
chr8 (148-255)||(10086784-10086891)
chr8 (147-256)||(5667123-5667232)
chr8 (147-256)||(45191130-45191239)
chr8 (170-265)||(34541829-34541924)
chr8 (171-244)||(8243415-8243488)
chr8 (147-244)||(8796460-8796557)
chr8 (148-256)||(43844475-43844581)
chr8 (170-244)||(34229679-34229753)
chr8 (134-206)||(43844545-43844617)
chr8 (147-254)||(4958627-4958733)
chr8 (147-205)||(5667100-5667158)
chr8 (147-267)||(8243403-8243523)
chr8 (147-206)||(8796425-8796484)
chr8 (147-206)||(35441045-35441104)
chr8 (147-206)||(5033164-5033223)
chr8 (132-206)||(34229629-34229703)
chr8 (161-221)||(31159912-31159972)
chr8 (147-206)||(2581828-2581887)
chr8 (147-206)||(10086760-10086819)
chr8 (147-206)||(22649848-22649907)
chr8 (147-206)||(33841667-33841726)
chr8 (212-254)||(2581853-2581895)
chr8 (169-219)||(35031639-35031689)
chr8 (220-256)||(5033237-5033273)
chr8 (220-256)||(35440995-35441031)
chr8 (167-219)||(37618750-37618802)
chr8 (167-214)||(1880306-1880353)
chr8 (168-219)||(13470042-13470093)
chr8 (219-256)||(22649871-22649908)
chr8 (168-205)||(39139838-39139875)
chr8 (220-256)||(8796498-8796534)
chr8 (220-256)||(10086833-10086869)
chr8 (220-256)||(33841617-33841653)
chr8 (147-191)||(35031706-35031750)
[»] chr3 (46 HSPs)
chr3 (147-264)||(1801449-1801566)
chr3 (12-133)||(52114269-52114390)
chr3 (147-256)||(41752990-41753099)
chr3 (147-254)||(50524730-50524837)
chr3 (148-256)||(51046077-51046185)
chr3 (158-250)||(47492061-47492153)
chr3 (184-267)||(47677295-47677378)
chr3 (170-267)||(29031740-29031837)
chr3 (143-255)||(30580755-30580867)
chr3 (170-265)||(30476500-30476595)
chr3 (134-256)||(30734392-30734514)
chr3 (170-256)||(43139735-43139821)
chr3 (147-215)||(45103112-45103180)
chr3 (170-244)||(33689214-33689288)
chr3 (147-206)||(33689179-33689238)
chr3 (170-256)||(50550001-50550087)
chr3 (147-206)||(47492123-47492182)
chr3 (170-259)||(49418717-49418806)
chr3 (176-256)||(18321677-18321757)
chr3 (140-206)||(43139785-43139851)
chr3 (171-221)||(55223293-55223343)
chr3 (130-191)||(55223218-55223279)
chr3 (215-267)||(1801566-1801618)
chr3 (147-206)||(41752967-41753026)
chr3 (148-206)||(30580832-30580890)
chr3 (202-267)||(39385746-39385811)
chr3 (150-198)||(18321657-18321705)
chr3 (147-206)||(30734478-30734537)
chr3 (147-206)||(51046149-51046208)
chr3 (167-215)||(21024117-21024165)
chr3 (158-237)||(30904289-30904368)
chr3 (220-267)||(33689252-33689299)
chr3 (220-267)||(47677270-47677317)
chr3 (172-229)||(34060238-34060295)
chr3 (220-256)||(1801472-1801508)
chr3 (220-256)||(41753040-41753076)
chr3 (171-206)||(30476550-30476585)
chr3 (154-193)||(34060203-34060242)
chr3 (218-267)||(1272508-1272557)
chr3 (226-267)||(49414505-49414546)
chr3 (170-206)||(29031790-29031826)
chr3 (220-256)||(30476500-30476536)
chr3 (150-206)||(39057033-39057089)
chr3 (143-191)||(39429996-39430044)
chr3 (220-256)||(47492073-47492109)
chr3 (134-206)||(50549965-50550037)
[»] chr1 (74 HSPs)
chr1 (147-256)||(48993920-48994029)
chr1 (141-267)||(15220826-15220952)
chr1 (134-267)||(29371383-29371516)
chr1 (147-267)||(49444916-49445034)
chr1 (148-256)||(29179601-29179709)
chr1 (168-267)||(8337875-8337974)
chr1 (151-256)||(32540755-32540860)
chr1 (147-252)||(5995399-5995504)
chr1 (147-255)||(17127567-17127675)
chr1 (176-267)||(46333978-46334069)
chr1 (150-264)||(33219591-33219705)
chr1 (182-267)||(34062224-34062309)
chr1 (134-256)||(4609022-4609135)
chr1 (170-265)||(47303412-47303507)
chr1 (170-256)||(37155072-37155158)
chr1 (170-267)||(38674531-38674626)
chr1 (176-256)||(45728313-45728393)
chr1 (182-256)||(1091582-1091656)
chr1 (182-259)||(741540-741617)
chr1 (176-252)||(9157340-9157416)
chr1 (170-256)||(44706809-44706896)
chr1 (170-261)||(48604973-48605064)
chr1 (170-228)||(1819515-1819573)
chr1 (168-259)||(5694914-5695004)
chr1 (147-206)||(29179673-29179732)
chr1 (193-256)||(36290456-36290519)
chr1 (147-206)||(37155049-37155108)
chr1 (168-255)||(48498442-48498529)
chr1 (206-256)||(21630068-21630118)
chr1 (140-206)||(44706860-44706926)
chr1 (168-224)||(28928803-28928859)
chr1 (147-206)||(9157313-9157372)
chr1 (147-206)||(21630045-21630104)
chr1 (147-206)||(46932000-46932059)
chr1 (147-206)||(48993993-48994052)
chr1 (141-206)||(28395634-28395699)
chr1 (211-256)||(28395663-28395708)
chr1 (134-199)||(36290490-36290555)
chr1 (220-267)||(1819504-1819551)
chr1 (220-267)||(34062285-34062332)
chr1 (151-206)||(45728294-45728349)
chr1 (222-267)||(48823900-48823945)
chr1 (220-256)||(5995445-5995481)
chr1 (147-206)||(1091620-1091679)
chr1 (220-267)||(4609072-4609119)
chr1 (147-206)||(5995372-5995431)
chr1 (220-267)||(19711195-19711242)
chr1 (147-206)||(32540824-32540883)
chr1 (220-267)||(46333961-46334008)
chr1 (147-206)||(48498418-48498477)
chr1 (220-265)||(37155122-37155167)
chr1 (220-256)||(48993943-48993979)
chr1 (148-219)||(12441018-12441089)
chr1 (220-255)||(17127591-17127626)
chr1 (147-206)||(17127640-17127699)
chr1 (220-267)||(28928794-28928841)
chr1 (220-267)||(38674520-38674567)
chr1 (147-197)||(9884844-9884894)
chr1 (233-267)||(36290430-36290464)
chr1 (218-256)||(46932023-46932061)
chr1 (226-256)||(46932064-46932094)
chr1 (220-265)||(741519-741564)
chr1 (222-267)||(9157388-9157433)
chr1 (147-196)||(31342266-31342315)
chr1 (168-205)||(32157602-32157639)
chr1 (147-200)||(46932064-46932116)
chr1 (152-193)||(47303666-47303707)
chr1 (170-206)||(741578-741614)
chr1 (134-206)||(4608986-4609058)
chr1 (161-197)||(9379835-9379871)
chr1 (220-256)||(29179623-29179659)
chr1 (220-256)||(29371444-29371480)
chr1 (170-206)||(38674579-38674615)
chr1 (220-259)||(44706806-44706846)
[»] scaffold0586 (2 HSPs)
scaffold0586 (147-256)||(7050-7159)
scaffold0586 (147-206)||(7123-7181)
[»] scaffold0016 (2 HSPs)
scaffold0016 (147-267)||(49706-49826)
scaffold0016 (220-254)||(49731-49765)
[»] scaffold0161 (2 HSPs)
scaffold0161 (147-256)||(27223-27332)
scaffold0161 (147-203)||(27299-27355)
[»] scaffold0047 (2 HSPs)
scaffold0047 (170-267)||(63772-63869)
scaffold0047 (220-265)||(63833-63878)
[»] scaffold0180 (1 HSPs)
scaffold0180 (135-229)||(19113-19207)
[»] scaffold1033 (2 HSPs)
scaffold1033 (176-230)||(2265-2319)
scaffold1033 (220-267)||(2289-2336)
[»] scaffold1029 (2 HSPs)
scaffold1029 (176-230)||(2265-2319)
scaffold1029 (220-267)||(2289-2336)
[»] scaffold0481 (2 HSPs)
scaffold0481 (170-231)||(2913-2974)
scaffold0481 (220-267)||(2902-2949)
[»] scaffold0536 (1 HSPs)
scaffold0536 (161-221)||(4909-4969)


Alignment Details
Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 42628430 - 42628310
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggt 42628331  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  42628330 caatgtcacccaactctatgt 42628310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 11017004 - 11016895
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 11016905  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  11016904 caatgtcacc 11016895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 4290680 - 4290583
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  4290680 gtgacatacagttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattg 4290583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 29053338 - 29053437
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  29053338 ttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgt 29053437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 15027661 - 15027568
Alignment:
Q  163 tgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcacc 15027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 38975940 - 38975843
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    ||||||||||||| |||||||||||||| |||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 38975843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 4649436 - 4649335
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagaga--aacacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||  |||||||||||||||||||    
T  4649436 ttggtgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtcacccaactctat 4649337  T
Q  266 gt 267  Q
    ||    
T  4649336 gt 4649335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 41018254 - 41018340
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41018254 ggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcacc 41018340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 48000869 - 48000769
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaa 249  Q
    ||||||||||||||||||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||| |||||||||||||||||||| |||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattggccaa 48000770  T
Q  250 t 250  Q
    |    
T  48000769 t 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 7671949 - 7672025
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccca 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  7671949 caatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccca 7672025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 34854719 - 34854807
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||    
T  34854719 ttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcacc 34854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 27028825 - 27028905
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||  ||||||||||    
T  27028825 attggacaatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcacc 27028905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 48000697 - 48000769
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  48000697 gtgacattgagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 41945990 - 41945893
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||| |||| || |||| ||||||    
T  41945990 gtgacataaagttgagtgacattggtaatattggtcaatcacaatgttacaatgcttgtgaaagagaaaaaaacgcaaacattatgacattatgattg 41945893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 34854830 - 34854710
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||             ||||||||||||||||||||||||||     
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtgattggc 34854731  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||| ||||||||||    
T  34854730 caatgtcaccaaactctatgt 34854710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 4290548 - 4290603
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgct 202  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgct 4290603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 11016872 - 11016931
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 38975808 - 38975867
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 45231985 - 45231929
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgctt 203  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgctt 45231929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 22764753 - 22764812
Alignment:
Q  197 aatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcacc 22764812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 27028731 - 27028790
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  27028731 gtgacatatagttgagtgacattggtgacattggacaatcacaatgtcacaatgcttgtg 27028790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41018363 - 41018307
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgctt 203  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgctt 41018307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 10419556 - 10419485
Alignment:
Q  184 atcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||  |||| ||||||  |||||||||    
T  10419556 atcacaatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtcac 10419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 27028928 - 27028869
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||| ||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  27028928 gtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtg 27028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 45231908 - 45231962
Alignment:
Q  202 ttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||| |||||||||  |||||||||||| ||||||||||    
T  45231908 ttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcacc 45231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 45231906 - 45231869
Alignment:
Q  230 gtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45231906 gtggcattgtgattggtcaatgtcacccaactctatgt 45231869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 22764820 - 22764776
Alignment:
Q  162 gtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtg 22764776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 29053376 - 29053329
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  29053376 cacaagcattgaggcattgtgattggccaatgtcaccaaactctatgt 29053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 41018290 - 41018243
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||    
T  41018290 cacaagcattgggacattgtgattggccaatgtcacccaactctatgt 41018243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15027618 - 15027654
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  15027618 cacaagcattgtgacattgtgattggtcaatgtcacc 15027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 30217504 - 30217564
Alignment:
Q  194 cacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtca 254  Q
    |||||||||||||||||||||||||||| || |||| ||  |||||||||||  |||||||    
T  30217504 cacaatgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtca 30217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 43500001 - 43500037
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcaca 197  Q
    ||||||||| |||||||||||||||||||||||||||    
T  43500001 ggtgacattagtgatattggtcaatcacaatgtcaca 43500037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 48000756 - 48000720
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  48000756 cacaagcattgtggcattgtgattgatcaatgtcacc 48000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 7671973 - 7671934
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  7671973 cacaagcattgtggcattgtgattggctaatgtcacccaa 7671934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 256
Target Start/End: Original strand, 48000819 - 48000849
Alignment:
Q  226 cattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||||||||    
T  48000819 cattgtggcattgtgattggtcaatgtcacc 48000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 25001420 - 25001391
Alignment:
Q  141 atttgagtgacatagagttgggtgacattg 170  Q
    ||||||||||||||||||||||||||||||    
T  25001420 atttgagtgacatagagttgggtgacattg 25001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 27028795 - 27028754
Alignment:
Q  215 agaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||| |||||||||||  ||||||||||    
T  27028795 agaaacacaagcattgtgacattgtgattgtccaatgtcacc 27028754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 35303250 - 35303299
Alignment:
Q  162 gtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaaga 211  Q
    |||| |||||||||||| ||| |||| ||||||||||| |||||||||||    
T  35303250 gtgatattggtgatattagtcgatcaaaatgtcacaatccttgtgaaaga 35303299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 6225529 - 6225600
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    |||||||||| |||| |||||||| ||| |||  ||||||||||||||||  | ||| |||||||||||||||    
T  6225529 gtgacatagaattgg-tgacattgatgacattaatcaatcacaatgtcacggtccttatgaaagagagagaaa 6225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 11016945 - 11016981
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  11016945 cacaaacattgtgacattgtgattggtcaatgtcacc 11016981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 27028852 - 27028808
Alignment:
Q  223 aagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||| |||||||||||  |||||| ||||||||||||||    
T  27028852 aagcattgtgacattgtgattgtccaatgttacccaactctatgt 27028808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 42375145 - 42375025
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgac 42375046  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  42375045 caatgtcacccaactctatgt 42375025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 47661983 - 47661868
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47661983 atttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 47661884  T
Q  241 attggtcaatgtcacc 256  Q
    ||||| ||||||||||    
T  47661883 attggccaatgtcacc 47661868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 23444266 - 23444381
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| || ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23444266 atttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 23444365  T
Q  241 attggtcaatgtcacc 256  Q
    ||||| ||||||||||    
T  23444366 attggccaatgtcacc 23444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 6271837 - 6271728
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6271837 gtgacatagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 6271738  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  6271737 caatgtcacc 6271728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 51265580 - 51265471
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||| |||||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51265580 gtgacttagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 51265481  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  51265480 caatgtcacc 51265471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 53954745 - 53954631
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||     
T  53954745 gtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggc 53954646  T
Q  247 caatgtcacccaact 261  Q
    |||||||||||||||    
T  53954645 caatgtcacccaact 53954631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 47404611 - 47404708
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  47404611 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcacccaactctatgt 47404708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 40789293 - 40789194
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||    
T  40789293 ttggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcaccaaactctatgt 40789194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 55090023 - 55090119
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||| |||||||||||    
T  55090023 gtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcactcaactctatgt 55090119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 35682301 - 35682192
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||| |||||||||||||| ||||  | |||||||||||||||||||||||||||| ||||||||||||| ||| || ||||||||||||     
T  35682301 gtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggc 35682202  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  35682201 caatgtcacc 35682192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 52028661 - 52028564
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||    
T  52028661 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcacccaactctatgt 52028564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 47762734 - 47762635
Alignment:
Q  156 agttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    |||||| ||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||||    
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 30861823 - 30861886
Alignment:
Q  193 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30861823 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 30861886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 25818387 - 25818461
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 232  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  25818387 ttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattgtg 25818461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 26186042 - 26186124
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtca 254  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||||| ||||||||    
T  26186042 ggtgacattggtcaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattgtgaaattgtgattggccaatgtca 26186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 44380071 - 44379959
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| |||||||||||||| ||||||||||||||||||  |||||||||||| ||||| ||| | ||| |||||||||| ||||||||||| |||| |     
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtgacattata 44379972  T
Q  241 attggtcaatgtc 253  Q
    ||||| |||||||    
T  44379971 attggccaatgtc 44379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 31430499 - 31430581
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||| |||||||||||||||||||| |   |||||||||| ||||| |||||||||||||||||||||    
T  31430499 caatcacaatgtcacaatgcttatgaaagagagagaaacacaaac---gtggcattgtaattggccaatgtcacccaactctatgt 31430581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 50384131 - 50384193
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 232  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50384131 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 50384193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 38714957 - 38714838
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    ||||||| || ||||||||||||||||||||   ||||| ||||||||||||| |||||||||| | ||||||| ||  ||| || |||||||||||| |    
T  38714957 tgacatatagatgggtgacattggtgatattacccaatctcaatgtcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtgattggcc 38714858  T
Q  248 aatgtcacccaactctatgt 267  Q
    ||| ||||| ||||||||||    
T  38714857 aatatcacctaactctatgt 38714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 23444411 - 23444345
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 24006096 - 24006185
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||    
T  24006096 ggtgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaacataa--------acattgtgattggtcaatgtcacccaactctatgt 24006185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 3862681 - 3862622
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 3871438 - 3871379
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 51265448 - 51265507
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 31532716 - 31532801
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||| |||| |||||||||||||||||||   ||| ||||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  31532716 gtgacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaatacaaacattgtgacgttgtgattggtcaatgtcacc 31532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 45591446 - 45591498
Alignment:
Q  180 gtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 232  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  45591446 gtcaatcataatgtcacaatgcttgtgaaagagagagaaacacaaacattgtg 45591498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 6271705 - 6271764
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||    
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtg 6271764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 31430520 - 31430476
Alignment:
Q  223 aagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  31430520 aagcattgtgacattgtgattggtcaatgtcacccaactctatgt 31430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 26186149 - 26186090
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||||| ||||||||||||||    
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtg 26186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 30861909 - 30861850
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 30861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 50384167 - 50384120
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  50384167 cacaagcattgtgacattgtgattggccaatgtcacccaactctatgt 50384120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 5048934 - 5048884
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaa 198  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  5048934 tgacatagagttgggtgacattgatgacattggtcaatcataatgtcacaa 5048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 30710035 - 30709986
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcac 196  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcac 30709986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 47661856 - 47661904
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  47661856 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 47661904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 3862619 - 3862658
Alignment:
Q  217 aaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcacc 3862658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 3871376 - 3871415
Alignment:
Q  217 aaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcacc 3871415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 24006132 - 24006085
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  24006132 cacaagcattgtgtcattgtgattggccaatgtcacccaactgtatgt 24006085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 28693961 - 28694008
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 229  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  28693961 caatcacaatatcacaatgtttgtgaaagagagagaaacacaaacatt 28694008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 35682169 - 35682228
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||| ||||| |||||||| ||||| |||||||||||||| ||| ||||||    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtg 35682228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 47404647 - 47404600
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||    
T  47404647 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgt 47404600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 52028625 - 52028672
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  52028625 cacaagcattgtgacattgtgattggccaatgtcacccaattctatgt 52028672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 19184488 - 19184549
Alignment:
Q  129 attttggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaa 190  Q
    ||||||||||| ||||| |||| ||||||||  ||||||||| ||| |||||||||||||||    
T  19184488 attttggatagcatttgggtgagatagagttaagtgacattgatgacattggtcaatcacaa 19184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 54716351 - 54716384
Alignment:
Q  137 tagtatttgagtgacatagagttgggtgacattg 170  Q
    ||||||||||||||||||||||||||||||||||    
T  54716351 tagtatttgagtgacatagagttgggtgacattg 54716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 23444331 - 23444295
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23444331 cacaagcattgtgacattgtgattggtcaatgtcacc 23444295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 44379934 - 44379990
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttg 204  Q
    ||||||||||||| |||||||||| || ||||| |||| | ||||||||||||||||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttg 44379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 47661918 - 47661954
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47661918 cacaagcattgtgacattgtgattggtcaatgtcacc 47661954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 40789255 - 40789302
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| |||| ||||| ||||||||||    
T  40789255 cacaagcattgtgacattgtgattggccaatatcaccaaactctatgt 40789302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 55090058 - 55090011
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||  ||||||||| |||||||||||    
T  55090058 cacaagcattgtgacattgtgattgaccaatgtcactcaactctatgt 55090011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 55090107 - 55090072
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||||||||||||||||||||||||||    
T  55090107 gtgacattggtcaatcacaatgtcacaatgcttgtg 55090072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 17285807 - 17285845
Alignment:
Q  221 acaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  17285807 acaagtattgtgacattgtgattggtcaatgtcacccaa 17285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 49469911 - 49469983
Alignment:
Q  146 agtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    ||||||||||| |||| ||| || ||||| | || ||||||||| |||||||||  ||||||||||||||||||    
T  49469911 agtgacatagaattgg-tgagataggtgacaatgatcaatcacagtgtcacaattattgtgaaagagagagaaa 49469983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 6271778 - 6271814
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  6271778 cacaagcattgtgacattgtgattggccaatgtcacc 6271814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 31846932 - 31846896
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcaca 197  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  31846932 ggtgacattggtgatattggccaaccacaatgtcaca 31846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 35682242 - 35682278
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  35682242 cacaagcattgtgacattgtgatcggtcaatgtcacc 35682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 41306636 - 41306672
Alignment:
Q  162 gtgacattggtgatattggtcaatcacaatgtcacaa 198  Q
    ||||||||||||||||||||||| || ||||||||||    
T  41306636 gtgacattggtgatattggtcaaccataatgtcacaa 41306672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 42375036 - 42375072
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  42375036 ggtgacattggtcaatcacaatgccacaatgcttgtg 42375072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 42375086 - 42375122
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  42375086 cacaagcattgtgacattgtgattgatcaatgtcacc 42375122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 47762600 - 47762664
Alignment:
Q  136 atagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatg 200  Q
    |||||||||| ||||||||||| || |||| ||| |||| ||||  |||||||||||| ||||||    
T  47762600 atagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatg 47762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 51265521 - 51265557
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  51265521 cacaagcattgtgacattatgattggtcaatgtcacc 51265557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 54716396 - 54716364
Alignment:
Q  235 attgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||| ||||||||||||||||||||||    
T  54716396 attgtgattgatcaatgtcacccaactctatgt 54716364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 38933722 - 38933602
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38933722 gtgacatagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 38933623  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  38933622 caatgtcacccaactctatgt 38933602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 6217227 - 6217347
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggc 6217326  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  6217327 caatgtcacccaactctatgt 6217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 14229356 - 14229475
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |     
T  14229356 gtgacatagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatt-gc 14229454  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||| ||||||||||||    
T  14229455 caatgtcatccaactctatgt 14229475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 6722086 - 6721977
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  6722086 gtgacatagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggt 6721987  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  6721986 caatgtcacc 6721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 16514559 - 16514450
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||     
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggc 16514460  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  16514459 caatgtcacc 16514450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 29925580 - 29925693
Alignment:
Q  154 agagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtc 253  Q
    |||||||||||| |||||||| ||||| |  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  29925580 agagttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtc 29925679  T
Q  254 acccaactctatgt 267  Q
    ||||||||||||||    
T  29925680 acccaactctatgt 29925693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 37961841 - 37961722
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||| |||| ||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||    
T  37961841 gtgacatagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatggcattgtgatcggt 37961742  T
Q  247 caatgtcacccaactctatg 266  Q
    ||||||||||||||||||||    
T  37961741 caatgtcacccaactctatg 37961722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 29508693 - 29508803
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaa-tgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgg 245  Q
    |||||||||||||||||||||||||||| ||||  ||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattgg 29508792  T
Q  246 tcaatgtcacc 256  Q
     ||||||||||    
T  29508793 ccaatgtcacc 29508803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 2828696 - 2828599
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  2828696 ggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacccaactctatgt 2828599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 2894069 - 2893978
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||    
T  2894069 attggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcacccaactctatgt 2893978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 134 - 245
Target Start/End: Original strand, 14470582 - 14470693
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 233  Q
    |||||| | ||| |||||||||||||||||||||||||||| ||||  ||||||||||||  ||||||||||||||||||||||||||||| |||||||     
T  14470582 ggatagcacttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtga 14470681  T
Q  234 cattgtgattgg 245  Q
    ||||||||||||    
T  14470682 cattgtgattgg 14470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 24116055 - 24115950
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||  ||||||||||||     
T  24116055 gtgacatagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggc 24115956  T
Q  247 caatgt 252  Q
    ||||||    
T  24115955 caatgt 24115950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 15011391 - 15011306
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcacc 15011306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 33018684 - 33018620
Alignment:
Q  143 ttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33018684 ttgaatgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 14892401 - 14892298
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| ||||||||||||||| |||||||||||| |||| ||||||||||||| ||||| ||| ||||||||||||||| |||| || |||| |||||||    
T  14892401 atttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaaaca-tgtgacattgtg 14892303  T
Q  241 attgg 245  Q
    |||||    
T  14892302 attgg 14892298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 9173116 - 9173058
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgt 9173058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 1945398 - 1945517
Alignment:
Q  130 ttttggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 229  Q
    |||||||||| | |||  ||| ||| |||||||||||||||||||||||||||||| ||||||      ||||||||||||||||| ||||  |||||||    
T  1945398 ttttggatagcacttggatgatataaagttgggtgacattggtgatattggtcaattacaatg------tgcttgtgaaagagagaaaaacttaagcatt 1945491  T
Q  230 gtggcattgtgattggtcaatgtcac 255  Q
    ||   |||||||||||| ||||||||    
T  1945492 gtaatattgtgattggttaatgtcac 1945517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 37762039 - 37762101
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  37762039 caatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattg 37762101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 32545936 - 32545855
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagaga 215  Q
    |||||| | ||| |||||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  32545936 ggatagcacttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcacaatgcttatgaaagagaga 32545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 8534256 - 8534174
Alignment:
Q  172 tgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtca 254  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||| |  |||||| |||| |||||||||    
T  8534256 tgatattggtcaattacaatgtcacaattcttgtgaaatagagagaaacacaaatatttttacattgtaattgatcaatgtca 8534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 16514427 - 16514486
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||| || ||||||||||    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtg 16514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 29508826 - 29508767
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||||||||    
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtg 29508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 9173007 - 9173093
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||||  |||| |||| || ||||||| | ||||| ||||||| ||||||||||||||||||||||||| |||| |||||    
T  9173007 ggtgacattggttcatcagaatgccataatgcttataaaagaaagagaaatacaagcattgtggcattgtgattggccaatatcacc 9173093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 15011294 - 15011342
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  15011294 ttgggtgacattggtgatattggccaatcacaatgccacaatgtttgtg 15011342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 15011356 - 15011403
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  15011356 cacaagcattgtgacattgtgattggccaatgtcactcaactctatgt 15011403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 32545789 - 32545840
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaa 198  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| |||||||||    
T  32545789 gtgacatagagttaggtgacattggtgacattggtcaaccacgatgtcacaa 32545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 37961782 - 37961817
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  37961782 cacaagcattgtggcattgtgattggtcaatgtcac 37961817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 2143943 - 2143995
Alignment:
Q  215 agaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||| || |||||||||||| ||| ||||| |||||||||||    
T  2143943 agaaacacaagcattatgacattgtgattggccaacgtcactcaactctatgt 2143995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 2828663 - 2828703
Alignment:
Q  223 aagcattgtggcattgtgattggtcaatgtcacccaactct 263  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  2828663 aagcattgtgacattgtgattggccaatgtcacccaactct 2828703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 6217286 - 6217250
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6217286 cacaagcattgtggcattgtgattggccaatgtcacc 6217250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 14464582 - 14464622
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaaga 211  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  14464582 gtgacattggtcaatcacaatgtcacaatacttgtgaaaga 14464622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 16514500 - 16514536
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16514500 cacaagcattgtgacattgtgattggtcaatgtcacc 16514536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 37762063 - 37762019
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactcta 264  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||    
T  37762063 cacaagcattgcgacattgtgattggtcaatgtcactcaactcta 37762019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 24115909 - 24115982
Alignment:
Q  133 tggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||| | ||| |||| ||||||||| || |||||||| | ||||| |||||||||||| ||||||| ||||    
T  24115909 tggatagcacttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtg 24115982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 29508753 - 29508716
Alignment:
Q  220 cacaagcattgtggcatt-gtgattggtcaatgtcacc 256  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29508753 cacaagcattgtggcatttgtgattggtcaatgtcacc 29508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 6721965 - 6722013
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||||||| ||||  |||||||||| ||||||||||||||    
T  6721965 ttggatgacattggtgacattgaccaatcacaatatcacaatgcttgtg 6722013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 37762121 - 37762077
Alignment:
Q  162 gtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||| || ||||||||||||| ||||||||||||||    
T  37762121 gtgatattggtgacatgggtcaatcacaatatcacaatgcttgtg 37762077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 24618600 - 24618724
Alignment:
Q  143 ttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgat 242  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  24618600 ttgagtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgat 24618699  T
Q  243 tggtcaatgtcacccaactctatgt 267  Q
    ||||||| |||||||||||||||||    
T  24618700 tggtcaacgtcacccaactctatgt 24618724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 12343232 - 12343115
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaa 249  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  12343232 acatagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaa 12343133  T
Q  250 tgtcacccaactctatgt 267  Q
    ||||||||||||||||||    
T  12343132 tgtcacccaactctatgt 12343115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 551191 - 551277
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  551191 ggtgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 551277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 10521873 - 10521972
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||  ||||||||| |||||||||||    
T  10521873 ttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcactcaactctatgt 10521972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 17751037 - 17750928
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||| |||| ||| ||||| | |||||||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||      
T  17751037 gtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgac 17750938  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  17750937 caatgtcacc 17750928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 13043598 - 13043502
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcatt 237  Q
    ||||| |||||||||||||| |||| |||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13043598 atttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtgacatt 13043502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 2315330 - 2315427
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| ||| |||||||||  ||||||||||| ||||||||||    
T  2315330 ggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcattatggtattgtgattattcaatgtcacctaactctatgt 2315427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 31654385 - 31654322
Alignment:
Q  202 ttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  31654385 ttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacccaactctat 31654322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 24587464 - 24587523
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 24587558 - 24587488
Alignment:
Q  185 tcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||  |||||||||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcac 24587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 24975755 - 24975815
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 207  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  24975755 gtgacatagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 17750891 - 17750963
Alignment:
Q  132 ttggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    |||||||| | ||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||| ||||    
T  17750891 ttggatagcacttgtgtgacatagagttga-tgacattggtgacattggtcaatcacaatgtcacaatgtttgt 17750963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 551307 - 551241
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| |||||||||| |||| ||| |||||||| ||||| ||||||||||| |||||||||||||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 551241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 551227 - 551181
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatg 266  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||||    
T  551227 cacaaacattgtggcattgtgattgaccaatgtcacccaactctatg 551181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 10521908 - 10521864
Alignment:
Q  223 aagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||    
T  10521908 aagcattgtgacattgtgattggccaatgtcaccaaactctatgt 10521864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 13043444 - 13043484
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattgg 180  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  13043444 tatttgggtgacatagaattgggtgacattggtgatattgg 13043484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 2315366 - 2315325
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaact 261  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||    
T  2315366 cacaaacattgtgacattgtgattgatcaatgtcacccaact 2315325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 7384491 - 7384552
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaa 208  Q
    |||| |||||||||| ||||||| |||| ||||  |||||||||||||| |||| |||||||    
T  7384491 gtgatatagagttggatgacattagtgacattgaccaatcacaatgtcataatgtttgtgaa 7384552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 13043474 - 13043519
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||    
T  13043474 ggtgatattggcgatattggtcaatcgaaatgtcacaatgcttgtg 13043519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 12343176 - 12343212
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  12343176 cacaagcattgtgacattgtgattggccaatgtcacc 12343212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 267
Target Start/End: Complemental strand, 13766781 - 13766753
Alignment:
Q  239 tgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||||||||||    
T  13766781 tgattggtcaatgtcacccaactctatgt 13766753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 24975814 - 24975778
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||  ||||||||||    
T  24975814 cacaagcattgtggcattgtgattgaccaatgtcacc 24975778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 31654331 - 31654367
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  31654331 ggtgacattggccaatcacaatgtcacaatgcttgtg 31654367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 3899974 - 3899854
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 3899875  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  3899874 caatgtcacccaactctatgt 3899854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 16971279 - 16971159
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 16971180  T
Q  247 caatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||    
T  16971179 caatgtcacccaagtctatgt 16971159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 12913950 - 12913829
Alignment:
Q  135 gatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggc 234  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| |    
T  12913950 gataatatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgac 12913851  T
Q  235 attgtgattggtcaatgtcacc 256  Q
    ||||||||||| ||||||||||    
T  12913850 attgtgattggccaatgtcacc 12913829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 29699502 - 29699393
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29699502 gtgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 29699403  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  29699402 caatgtcacc 29699393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 28819059 - 28818932
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 239  Q
    |||||| |||||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  28819059 tatttgggtgacatagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgt 28818960  T
Q  240 gattggtcaatgtcacccaactctatgt 267  Q
    |||||  |||||||||||||||||||||    
T  28818959 gattgaccaatgtcacccaactctatgt 28818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 19655293 - 19655184
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  19655293 gtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggc 19655194  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  19655193 caatgtcacc 19655184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 291232 - 291123
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||     
T  291232 gtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggc 291133  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  291132 caatgtcacc 291123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 26662535 - 26662414
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaa-tcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgg 245  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||  ||||||||||||    
T  26662535 gtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattgg 26662436  T
Q  246 tcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||    
T  26662435 tcaatgtcacccaactctatgt 26662414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 26934130 - 26934009
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaa-tcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgg 245  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||  ||||||||||||    
T  26934130 gtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattgg 26934031  T
Q  246 tcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||    
T  26934030 tcaatgtcacccaactctatgt 26934009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 2953325 - 2953240
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 232  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 2953240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 2093940 - 2094060
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||  | ||||||| ||    
T  2093940 gtgacatagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattatgatagtgtgattagt 2094039  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||| |||||||| |||||||    
T  2094040 caatatcacccaattctatgt 2094060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 30117825 - 30117928
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||    
T  30117825 atttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatg 30117924  T
Q  241 attg 244  Q
    ||||    
T  30117925 attg 30117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 16439250 - 16439164
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  16439250 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcacc 16439164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 38134404 - 38134496
Alignment:
Q  175 tattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| |||| ||| ||||||||||||    
T  38134404 tattggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaatatcatccaactctatgt 38134496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 3180086 - 3180172
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  3180086 ggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcacc 3180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 291096 - 291158
Alignment:
Q  143 ttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  291096 ttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgt 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 19598431 - 19598358
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  19598431 caatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcacc 19598358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 2356406 - 2356290
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||| ||||  ||||||||||||||||||| |  |||||| ||||      
T  2356406 gtgacatagagttggatgacattggtgacattggccaatcac-atgtcacaatgcttatgaa--agagagaaacacaagcattataacattgtaattgcc 2356310  T
Q  247 caatgtcacccaactctatgt 267  Q
     ||||||| ||||||||||||    
T  2356309 taatgtca-ccaactctatgt 2356290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 16802544 - 16802467
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    |||||| ||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| |||||||||||||    
T  16802544 caatcagaatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcacccaa 16802467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 30117962 - 30117904
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtg 30117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 7009452 - 7009401
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaa 209  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  7009452 ttggatgacattggtgatattggtcaatcacaatatcacaatgcttgtgaaa 7009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 16439146 - 16439261
Alignment:
Q  152 atagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 251  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||||||             ||||||||||||| ||||||||||| ||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatg 16439245  T
Q  252 tcacccaactctatgt 267  Q
    ||||||||||||||||    
T  16439246 tcacccaactctatgt 16439261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 19598335 - 19598394
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtg 19598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 19655161 - 19655220
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 19655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 228484 - 228408
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 224  Q
    ||||||| |||||||| | |||| ||| ||| |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  228484 tgacataaagttgggtaatattgatgagatttgtcaatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaa 228408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 1638460 - 1638519
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||    
T  1638460 gtgatatagagttgggtgatatttgtgatattggccaatcacaatgtcacaatgtttgtg 1638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 12913806 - 12913865
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||| ||||| ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  12913806 gtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtg 12913865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 13312267 - 13312321
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgc 201  Q
    ||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgtcacaatgc 13312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 32485684 - 32485630
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgc 201  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  32485684 gtgacacagagttgggtgacattggtgacattgatcaatcacaatatcacaatgc 32485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 2935869 - 2935941
Alignment:
Q  183 aatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    ||||||||||||| |||| |||| ||||| |||||||||||| ||||||| ||||||| ||| ||||| ||||    
T  2935869 aatcacaatgtcataatgtttgtaaaagatagagaaacacaaacattgtgacattgtggttgttcaatatcac 2935941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 3180191 - 3180136
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||    
T  3180191 acatagagttgg-taacattggtgacattggtcaatcacaatgccacaatgcttgtg 3180136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 29699381 - 29699429
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  29699381 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29699429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 3899915 - 3899951
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3899915 cacaagcattgtgacattgtgattggtcaatgtcacc 3899951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 16802521 - 16802565
Alignment:
Q  221 acaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||    
T  16802521 acaagcattgtgacattctgattggtcaatgtcactcaactctat 16802565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 16971220 - 16971256
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16971220 cacaagcattgtgacattgtgattggtcaatgtcacc 16971256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 17849269 - 17849221
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||| |||||||| |||||||||||||||| || |||||||||||    
T  17849269 ttgggtgatattggtgacattggtcaatcacaatatcgcaatgcttgtg 17849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 3180122 - 3180075
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||||| |||| |||||| ||||||||||||||||||||||    
T  3180122 cacaaacattgtgacattatgattgatcaatgtcacccaactctatgt 3180075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 39031297 - 39031242
Alignment:
Q  136 atagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaat 191  Q
    ||||||||||  ||||||||||| ||||||||||||||| | || |||||||||||    
T  39031297 atagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaat 39031242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 11983259 - 11983328
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagaga 217  Q
    |||||||||| |||| ||| |||||||| |||||||||||| |||||||||||  ||| || |||||||||    
T  11983259 gtgacatagaattgg-tgatattggtgacattggtcaatcaaaatgtcacaatctttgagagagagagaga 11983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 22083149 - 22083095
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgc 201  Q
    ||||||||||||| |||||||||  |||||||||||||| | ||| |||||||||    
T  22083149 gtgacatagagtttggtgacattaatgatattggtcaattataatttcacaatgc 22083095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 31147137 - 31147183
Alignment:
Q  144 tgagtgacatagagttgggtgacattggtgatattggtcaatcacaa 190  Q
    ||||||||||||||||| ||||||||| | ||||||| |||||||||    
T  31147137 tgagtgacatagagttgagtgacattgataatattggccaatcacaa 31147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 38134483 - 38134449
Alignment:
Q  172 tgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||| |||||||||||||||||||||||||    
T  38134483 tgatattggccaatcacaatgtcacaatgcttgtg 38134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 7005274 - 7005218
Alignment:
Q  174 atattggtcaatcacaatgtcacaatgcttgtg-aaagagagagaaacacaagcattgtg 232  Q
    |||||||||||||||||||||||   ||||||| ||| | ||||||||||||||||||||    
T  7005274 atattggtcaatcacaatgtcac---gcttgtgaaaaaaaagagaaacacaagcattgtg 7005218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 2953266 - 2953302
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  2953266 cacaagcattgtgacattgtgattggccaatgtcacc 2953302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 14167191 - 14167223
Alignment:
Q  183 aatcacaatgtcacaatgcttgtgaaagagaga 215  Q
    ||||||||||||||||| |||||||||||||||    
T  14167191 aatcacaatgtcacaatccttgtgaaagagaga 14167223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 19655234 - 19655270
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  19655234 cacaagcattgtgacattgtgattggacaatgtcacc 19655270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 29699443 - 29699479
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  29699443 cacaagcattgtgacattgtgattggccaatgtcacc 29699479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 37325597 - 37325629
Alignment:
Q  183 aatcacaatgtcacaatgcttgtgaaagagaga 215  Q
    ||||||||||||||||| |||||||||||||||    
T  37325597 aatcacaatgtcacaatccttgtgaaagagaga 37325629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 39777054 - 39777086
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattg 179  Q
    |||||||||||||||||||||||||||| ||||    
T  39777054 gtgacatagagttgggtgacattggtgacattg 39777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 5033296 - 5033187
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 5033197  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  5033196 caatgtcacc 5033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 6296753 - 6296620
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 233  Q
    |||||||||||| |||| |||||||||| ||||||| |||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||     
T  6296753 ggatagtatttgggtgatatagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatga 6296654  T
Q  234 cattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||||||||||||||    
T  6296653 cattgtgattggtcaatgtcacccaactctatgt 6296620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 33841594 - 33841703
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggt 33841693  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  33841694 caatgtcacc 33841703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 35440972 - 35441081
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 35441071  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  35441072 caatgtcacc 35441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 39851089 - 39850972
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    ||||||| ||||| ||||||||||||| ||||  |||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  39851089 tgacataaagttgagtgacattggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggcc 39850990  T
Q  248 aatgtcacccaactctat 265  Q
    ||||||||||||||||||    
T  39850989 aatgtcacccaactctat 39850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 10086891 - 10086784
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||| |||| || |||||||||||  |    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgacc 10086792  T
Q  248 aatgtcac 255  Q
    ||||||||    
T  10086791 aatgtcac 10086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 5667232 - 5667123
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||| | |||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||      
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgac 5667133  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  5667132 caatgtcacc 5667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 45191130 - 45191239
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||| ||| |||||||| |||| | |||||||||| |||||||||| |||||||||||||||||||| ||||||  |||| ||||||||    
T  45191130 gtgacatagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggt 45191229  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  45191230 caatgtcacc 45191239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 34541829 - 34541924
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||| |||||||||    
T  34541829 ggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattgtggcattttgctaggtcaatgtcactcaactctat 34541924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 8243415 - 8243488
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8243415 gtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 8243488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 8796557 - 8796460
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    ||||||||||| | ||||| |||||||| ||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  8796557 gtgacatagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattg 8796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 43844475 - 43844581
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    |||||||||||||||||| |||| |||||||||| ||||| |||||||  |||||||||  |||||||||||||||||||||||| ||||||||||| ||    
T  43844475 tgacatagagttgggtgatattgatgatattggttaatcataatgtcaggatgcttgtg--agagagagaaacacaagcattgtgacattgtgattgatc 43844572  T
Q  248 aatgtcacc 256  Q
    ||| |||||    
T  43844573 aatatcacc 43844581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 34229753 - 34229679
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  34229753 ggtgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattg 34229679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 43844617 - 43844545
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  43844617 ggatagcaattgggtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtg 43844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 4958733 - 4958627
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||| | ||| ||| |||| ||||  ||||||||| |||||||| |||||||||||||||||||||||| |||| || ||||||||||||     
T  4958733 gtgacatagagttagatgatattagtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggc 4958635  T
Q  247 caatgtca 254  Q
    ||||||||    
T  4958634 caatgtca 4958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 5667100 - 5667158
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 8243523 - 8243403
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||             ||||||||||||||||||||||||| |    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattgat 8243424  T
Q  247 caatgtcacccaactctatgt 267  Q
    ||||||||| |||||||||||    
T  8243423 caatgtcactcaactctatgt 8243403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 8796425 - 8796484
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtg 8796484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 35441104 - 35441045
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 5033164 - 5033223
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 34229629 - 34229703
Alignment:
Q  132 ttggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||| | ||| ||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||||||    
T  34229629 ttggatagcacttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtg 34229703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 31159972 - 31159912
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaaca 221  Q
    ||||| |||||||| ||| | |||||| |||||||||||||||||||||||||||||||||    
T  31159972 ggtgatattggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaaca 31159912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 2581828 - 2581887
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||| ||||||||||||| ||| ||||| ||||||||||| |||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtg 2581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 10086760 - 10086819
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||| |||| |||||    
T  10086760 gtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtg 10086819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22649848 - 22649907
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||| ||||||||||||| |||||  |||||||||| |||||||||||||    
T  22649848 gtgacatagagttgagtgacattggtgacattggctaatcacaatgccacaatgcttgtg 22649907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 33841726 - 33841667
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||  |||||| |||| |||||||||||||    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtg 33841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 2581895 - 2581853
Alignment:
Q  212 gagagaaacacaagcattgtggcattgtgattggtcaatgtca 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtca 2581853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 35031639 - 35031689
Alignment:
Q  169 tggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  35031639 tggtgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 5033237 - 5033273
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5033237 cacaagcattgtgacattgtgattggtcaatgtcacc 5033273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 35441031 - 35440995
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35441031 cacaagcattgtgacattgtgattggtcaatgtcacc 35440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 37618750 - 37618802
Alignment:
Q  167 attggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    |||||||| ||||| |||||||||||||||||| ||||| | |||||||||||    
T  37618750 attggtgacattggccaatcacaatgtcacaatccttgtaagagagagagaaa 37618802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 1880353 - 1880306
Alignment:
Q  167 attggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagag 214  Q
    |||||||| |||||||||||||||||||||| | ||| ||||||||||    
T  1880353 attggtgacattggtcaatcacaatgtcacagtccttatgaaagagag 1880306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 13470093 - 13470042
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    ||||||| |||||||||||||||||| ||||| ||| | |||||||||||||    
T  13470093 ttggtgacattggtcaatcacaatgttacaatacttataaaagagagagaaa 13470042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 22649908 - 22649871
Alignment:
Q  219 acacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  22649908 acacaagcattgtggcattgtgattagccaatgtcacc 22649871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 39139875 - 39139838
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  39139875 ttggtgacattggtcaatcacaatgtcacaatccttgt 39139838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 8796498 - 8796534
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  8796498 cacaagcattgtgacattttgattggtcaatgtcacc 8796534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 10086833 - 10086869
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10086833 cacaaacattgtgacattgtgattggtcaatgtcacc 10086869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 33841653 - 33841617
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| || ||||||||||||||||||||    
T  33841653 cacaagcattgtgacaatgtgattggtcaatgtcacc 33841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 35031750 - 35031706
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaat 191  Q
    |||||||||||||| |||| ||| |||||||||||||| ||||||    
T  35031750 gtgacatagagttgagtgatatttgtgatattggtcaaccacaat 35031706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 1801449 - 1801566
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggc 1801548  T
Q  247 caatgtcacccaactcta 264  Q
    ||||||||||||||||||    
T  1801549 caatgtcacccaactcta 1801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 52114390 - 52114269
Alignment:
Q  12 taaataatactcttagtcaaaagattaactgataaaattttataaaattttcatttgcatataatctacgatattatttagtagaattgtttgaaagann 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||      
T  52114390 taaattatactcttagtcaaaagattaactgataaaattttataaaattttcatctgcatataatctacgatattatttagtagaattgtatgatagatt 52114291  T
Q  112 nnnnnatcagcatatatatttt 133  Q
         |||||||||||||||||    
T  52114290 tttctatcagcatatatatttt 52114269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 41753099 - 41752990
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  41753099 gtgacatagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggc 41753000  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  41752999 caatgtcacc 41752990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 50524837 - 50524730
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  50524837 gtgacatagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattggt 50524738  T
Q  247 caatgtca 254  Q
    ||||||||    
T  50524737 caatgtca 50524730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 51046077 - 51046185
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    |||||||||||||| ||| |||||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  51046077 tgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggcc 51046176  T
Q  248 aatgtcacc 256  Q
    |||||||||    
T  51046177 aatgtcacc 51046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 47492061 - 47492153
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaat 250  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaat 47492153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 47677295 - 47677378
Alignment:
Q  184 atcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  47677295 atcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcacccaactctatgt 47677378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 29031740 - 29031837
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||  |||| ||||| ||||||||||    
T  29031740 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacctaactctatgt 29031837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 30580755 - 30580867
Alignment:
Q  143 ttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgat 242  Q
    |||||||||||||| ||||||||||||||||||||||  |||||| |||||||||||  |||||||||||| ||||||||||||| |||| |||||||||    
T  30580755 ttgagtgacatagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgat 30580854  T
Q  243 tggtcaatgtcac 255  Q
    ||  |||||||||    
T  30580855 tgaccaatgtcac 30580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 30476500 - 30476595
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||  ||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcacataactctat 30476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 30734392 - 30734514
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 233  Q
    |||||| | ||| ||||||||||||| |||||||||| ||| ||||  | |||||||||||||||||||||||||||| ||||||||||||| ||| ||     
T  30734392 ggatagaacttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatga 30734491  T
Q  234 cattgtgattggtcaatgtcacc 256  Q
    |||||||||||| ||||||||||    
T  30734492 cattgtgattggccaatgtcacc 30734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 43139735 - 43139821
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  43139735 ggtgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcacc 43139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 45103112 - 45103180
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagaga 215  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45103112 gtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 33689288 - 33689214
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattg 244  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33689288 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg 33689214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 33689179 - 33689238
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33689179 gtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtg 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 50550087 - 50550001
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| |||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  50550087 ggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcacc 50550001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 47492182 - 47492123
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtg 47492123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 49418717 - 49418806
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||  ||| | ||||  |||||||||||||    
T  49418717 ggtgatattggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcattatgatattataattgaccaatgtcacccaa 49418806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 18321757 - 18321677
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||| | ||||| |||||||||||  ||||||||||    
T  18321757 attggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcacc 18321677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 43139851 - 43139785
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtg 43139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 55223343 - 55223293
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaaca 221  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  55223343 gtgatattggtcaatcataatgtcacaatgcttgtgaaagagagagaaaca 55223293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 55223218 - 55223279
Alignment:
Q  130 ttttggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaat 191  Q
    |||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  55223218 ttttggatagcacttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaat 55223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 1801566 - 1801618
Alignment:
Q  215 agaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1801566 agaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgt 1801618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 41752967 - 41753026
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 41753026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 30580890 - 30580832
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtg 30580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 39385746 - 39385811
Alignment:
Q  202 ttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||||||||| ||||  |||||  |||||||||||| |||||||||||||||||||||    
T  39385746 ttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtcacccaactctatgt 39385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 18321657 - 18321705
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaa 198  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaa 18321705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 30734537 - 30734478
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtg 30734478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 51046208 - 51046149
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtg 51046149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 21024117 - 21024165
Alignment:
Q  167 attggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagaga 215  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  21024117 attggtgacattggtcaaacacaatgtcacaattcttgtgaaagagaga 21024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 30904368 - 30904289
Alignment:
Q  158 ttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcatt 237  Q
    ||||||||||| | ||| |||  ||||||||||| |||||||  || | |||||||||||||||||||||||||| ||||    
T  30904368 ttgggtgacatcgatgacattaatcaatcacaatatcacaatatttataaaagagagagaaacacaagcattgtgacatt 30904289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 33689252 - 33689299
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  33689252 cacaagcattgtgacattgtgattggccaatgtcacccaactcaatgt 33689299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 47677317 - 47677270
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  47677317 cacaagcattgtgacattgtgatcggtcaatgtcaccaaactctatgt 47677270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 34060295 - 34060238
Alignment:
Q  172 tgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 229  Q
    ||||||| |||||||||||| ||||||| ||| ||||||||||| |||||||| ||||    
T  34060295 tgatatttgtcaatcacaatatcacaatacttatgaaagagagaaaaacacaaacatt 34060238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 1801508 - 1801472
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1801508 cacaagcattgtggcattgtgattggccaatgtcacc 1801472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 41753040 - 41753076
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||| ||||||||||    
T  41753040 cacaagcattgtggcattgtgattggccaatgtcacc 41753076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 30476585 - 30476550
Alignment:
Q  171 gtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||||||||||||||||||||||||||    
T  30476585 gtgacattggtcaatcacaatgtcacaatgcttgtg 30476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 34060203 - 34060242
Alignment:
Q  154 agagttgggtgacattggtgatattggtcaatcacaatgt 193  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  34060203 agagttggatgacattggtgatattggtcaatcataatgt 34060242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 1272557 - 1272508
Alignment:
Q  218 aacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||| || | ||||||| |||||||||| ||||||||||    
T  1272557 aacacaagcattgtgacaatttgattggccaatgtcaccaaactctatgt 1272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 49414505 - 49414546
Alignment:
Q  226 cattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||| |||||| ||||| |||||||||||||||||||||    
T  49414505 cattgtgacattgtaattggccaatgtcacccaactctatgt 49414546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 29031826 - 29031790
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||| |||||||||||||| |||||    
T  29031826 ggtgatattggtcaattacaatgtcacaatgtttgtg 29031790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 30476536 - 30476500
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  30476536 cacaagcattgtgacattgtgattggccaatgtcacc 30476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 39057089 - 39057033
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||| |||||||||||||| || || |||| |||||||||| ||| |||||    
T  39057089 acatagagttaggtgacattggtgacatcggacaatgacaatgtcacgatgtttgtg 39057033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 39430044 - 39429996
Alignment:
Q  143 ttgagtgacatagagttgggtgacattggtgatattggtcaatcacaat 191  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| ||||||    
T  39430044 ttgagtgacataaagttgggtgacattagtgacattggccaagcacaat 39429996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 47492109 - 47492073
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  47492109 cacaagcattgtgacattgtgattggccaatgtcacc 47492073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 50549965 - 50550037
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| || |||||||| ||| || ||||||| |||||||| ||||  |||||||||| | ||||||||||||    
T  50549965 ggataatacttgagtgatataaagctgggtgatattggtgacattgaccaatcacaatattacaatgcttgtg 50550037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 48993920 - 48994029
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 48994019  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  48994020 caatgtcacc 48994029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 15220952 - 15220826
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtg 240  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||    
T  15220952 atttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtg 15220853  T
Q  241 attggtcaatgtcacccaactctatgt 267  Q
    ||||  |||||||||||||||| ||||    
T  15220852 attgaccaatgtcacccaactccatgt 15220826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 29371516 - 29371383
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 233  Q
    |||||| | ||| ||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  29371516 ggatagcacttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtga 29371417  T
Q  234 cattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||| |||||||||| ||||||||||    
T  29371416 cattgtgattggccaatgtcacctaactctatgt 29371383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 49444916 - 49445034
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||| || | ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||     
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtga--gagagagaaacacaagcattgtggcattgtgattggc 49445013  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||||||||||||||    
T  49445014 caatgtcacccaactctatgt 49445034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 29179601 - 29179709
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtc 247  Q
    ||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggcc 29179700  T
Q  248 aatgtcacc 256  Q
    |||||||||    
T  29179701 aatgtcacc 29179709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 8337875 - 8337974
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8337875 ttggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtcacccaactctatgt 8337974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 32540755 - 32540860
Alignment:
Q  151 catagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaat 250  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32540755 catagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaat 32540854  T
Q  251 gtcacc 256  Q
    ||||||    
T  32540855 gtcacc 32540860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 5995504 - 5995399
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggc 5995405  T
Q  247 caatgt 252  Q
    ||||||    
T  5995404 caatgt 5995399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 17127567 - 17127675
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||| |||||||| ||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  17127567 gtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggt 17127666  T
Q  247 caatgtcac 255  Q
    |||||||||    
T  17127667 caatgtcac 17127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 46333978 - 46334069
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  46333978 attggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtcatccaactctatgt 46334069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 33219705 - 33219591
Alignment:
Q  150 acatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaa 249  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||    
T  33219705 acatagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaa 33219606  T
Q  250 tgtcacccaactcta 264  Q
    ||||| |||| ||||    
T  33219605 tgtcatccaattcta 33219591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 34062309 - 34062224
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34062309 caatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcacccaactctatgt 34062224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 4609135 - 4609022
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 233  Q
    |||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  4609135 ggatagtacttgtgtgacatagagttgggtgacat---------tggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtga 4609045  T
Q  234 cattgtgattggtcaatgtcacc 256  Q
    ||||||||| |||||||||||||    
T  4609044 cattgtgatgggtcaatgtcacc 4609022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 47303507 - 47303412
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||    
T  47303507 ggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattggtcaatatcacctaactctat 47303412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 37155158 - 37155072
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  37155158 ggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacc 37155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 38674531 - 38674626
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||    
T  38674531 ggtgatattggccaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattgtgacattatgattggccaatatcacccaactctatgt 38674626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 45728393 - 45728313
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  45728393 attggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcacc 45728313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 1091582 - 1091656
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcacc 1091656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 741540 - 741617
Alignment:
Q  182 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  741540 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcacccaa 741617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 9157416 - 9157340
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgt 252  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9157416 attgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgt 9157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 44706809 - 44706896
Alignment:
Q  170 ggtgatattggtcaatcacaa-tgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  44706809 ggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcacc 44706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 48604973 - 48605064
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaact 261  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||| | ||||| ||||||||| |||||    
T  48604973 ggtgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcactcaact 48605064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 1819515 - 1819573
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 228  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1819515 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 1819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 5694914 - 5695004
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaa 259  Q
    ||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||  |||||| |||||| ||||  |||||||||||||    
T  5694914 ttggtgacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcacccaa 5695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 29179732 - 29179673
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 36290456 - 36290519
Alignment:
Q  193 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| ||||    
T  36290456 tcacaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccacc 36290519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 37155049 - 37155108
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 48498529 - 48498442
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    ||||||| ||||  |||||||||||| || ||||||||||||||||||||||||||| |||||||| ||| ||||||  |||||||||    
T  48498529 ttggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcac 48498442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 21630118 - 21630068
Alignment:
Q  206 gaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 21630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 44706926 - 44706860
Alignment:
Q  140 tatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | |||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtg 44706860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 28928803 - 28928859
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 224  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  28928803 ttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaa 28928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 9157313 - 9157372
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||    
T  9157313 gtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 21630045 - 21630104
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 46932000 - 46932059
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 48994052 - 48993993
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 28395634 - 28395699
Alignment:
Q  141 atttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| || ||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||    
T  28395634 atttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 28395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 28395708 - 28395663
Alignment:
Q  211 agagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 28395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 36290555 - 36290490
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaat 199  Q
    |||||||| ||| |||||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  36290555 ggatagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaat 36290490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 1819551 - 1819504
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  1819551 cacaagcattgtgacattgtgattgatcaatgtcacccaactctatgt 1819504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 34062285 - 34062332
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  34062285 cacaaacattgtgacattgtgattggtcaatgtcacccaactctatgt 34062332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 45728294 - 45728349
Alignment:
Q  151 catagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtg 45728349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 48823945 - 48823900
Alignment:
Q  222 caagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  48823945 caagcattgtgacattgtgattggccaatgtcacccaactctatgt 48823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 5995445 - 5995481
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  5995445 cacaagcattgtggcattgtgattggtcaatgtcacc 5995481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 1091679 - 1091620
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||| ||||||||  |||  ||||||||||||||||||| |||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtg 1091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 4609072 - 4609119
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||    
T  4609072 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgt 4609119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 5995372 - 5995431
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||| | |||||||||| | ||||| ||||||||||| |||||||||||||    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtg 5995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 19711242 - 19711195
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  19711242 cacatgcattgtaacattgtgattggtcaatgtcacccaactctatgt 19711195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 32540883 - 32540824
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||||||| |||| |||||||||||| ||||  |||||||||||| ||||||||||||    
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtg 32540824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 46334008 - 46333961
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  46334008 cacaagcattgtgacattgtgattggccaatgtcatccaactctatgt 46333961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 48498418 - 48498477
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||  ||||||| |||||    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtg 48498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 37155122 - 37155167
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||    
T  37155122 cacaagtattgtgacattgtgattggccaatgtcacccaactctat 37155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 48993979 - 48993943
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48993979 cacaagcattgtgacattgtgattggtcaatgtcacc 48993943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 12441089 - 12441018
Alignment:
Q  148 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaa 219  Q
    ||||||||| || |||||||||||||  |||||  ||||||||||||| ||| ||||| |||||||| ||||    
T  12441089 tgacatagaatttggtgacattggtggcattggctaatcacaatgtcataatccttgtaaaagagagggaaa 12441018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 17127626 - 17127591
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcac 255  Q
    ||||||||||||| ||||||||||||||||||||||    
T  17127626 cacaagcattgtgacattgtgattggtcaatgtcac 17127591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 17127699 - 17127640
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||| |||||||| ||||||||| |||| ||||  |||||| ||||||||||||||||||    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtg 17127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 28928841 - 28928794
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||| |||| |||||||||||| |||||||||| ||||||||||    
T  28928841 cacaagcactgtgacattgtgattggccaatgtcaccaaactctatgt 28928794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 38674567 - 38674520
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||| |||| ||||||||||| ||||    
T  38674567 cacaagcattgtgacattgtgattggccaatatcacccaactccatgt 38674520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 9884844 - 9884894
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcaca 197  Q
    ||||||||| | | |||||||||||||| ||||||||| ||||||||||||    
T  9884844 gtgacatagtggttggtgacattggtgacattggtcaaccacaatgtcaca 9884894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 36290464 - 36290430
Alignment:
Q  233 gcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| |||||||||||||||||||||    
T  36290464 gcattgtgattggccaatgtcacccaactctatgt 36290430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 46932061 - 46932023
Alignment:
Q  218 aacacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  46932061 aacacaaacattgtggcattgtgattggccaatgtcacc 46932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 256
Target Start/End: Original strand, 46932064 - 46932094
Alignment:
Q  226 cattgtggcattgtgattggtcaatgtcacc 256  Q
    |||||||||||||||||||||||||||||||    
T  46932064 cattgtggcattgtgattggtcaatgtcacc 46932094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 741564 - 741519
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||||||||||| |||||||||||| |||||||||| || |||||    
T  741564 cacaagcattgtgacattgtgattgggcaatgtcacctaattctat 741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 9157388 - 9157433
Alignment:
Q  222 caagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    |||||||||||  |||||||||| ||||||||| ||||||||||||    
T  9157388 caagcattgtgatattgtgattgatcaatgtcaaccaactctatgt 9157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 31342266 - 31342315
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcac 196  Q
    |||||||||||||||||||||  | ||| ||||| |||||||||||||||    
T  31342266 gtgacatagagttgggtgacaccgatgacattggccaatcacaatgtcac 31342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 32157639 - 32157602
Alignment:
Q  168 ttggtgatattggtcaatcacaatgtcacaatgcttgt 205  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  32157639 ttggtgacattggtcaatcacagtgtcacaatgcttgt 32157602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 46932116 - 46932064
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatg 200  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||| |||||||    
T  46932116 gtgacatagagttgg-tgacattggtgacattgaccaatcacaatgccacaatg 46932064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 47303707 - 47303666
Alignment:
Q  152 atagagttgggtgacattggtgatattggtcaatcacaatgt 193  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  47303707 atagagttaggtgacattggtgatattggtctgtcacaatgt 47303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 741614 - 741578
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  741614 ggtgacattggtcgatcacaatgtcacaatgcttgtg 741578  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 4608986 - 4609058
Alignment:
Q  134 ggatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    |||||| | ||| |||| || |||||||||||||| ||||| ||||  | ||||||||||||||||| |||||    
T  4608986 ggatagcacttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtg 4609058  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 9379835 - 9379871
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcaca 197  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  9379835 ggtgacattggtgatattggccaaccacaatgtcaca 9379871  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 29179659 - 29179623
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  29179659 cacaagcattgtgacattgtgattggtcagtgtcacc 29179623  T

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Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 29371444 - 29371480
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacc 256  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  29371444 cacaagcattgtgacattgtgattggtcaatatcacc 29371480  T

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Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 38674615 - 38674579
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  38674615 ggtgatattggccaatcataatgtcacaatgcttgtg 38674579  T

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Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 44706846 - 44706806
Alignment:
Q  220 cacaagcattgtggcatt-gtgattggtcaatgtcacccaa 259  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  44706846 cacaagcattgtggcatttgtgattggccaatgtcacccaa 44706806  T

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Target: scaffold0586 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 7050 - 7159
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  7050 gtgacatagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggc 7149  T
Q  247 caatgtcacc 256  Q
    ||||||||||    
T  7150 caatgtcacc 7159  T

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Target: scaffold0586; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 7181 - 7123
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 206  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  7181 gtgacatagagttgg-tgacattggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

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Target: scaffold0016 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 49706 - 49826
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggc 49805  T
Q  247 caatgtcacccaactctatgt 267  Q
    |||||||||| ||||||||||    
T  49806 caatgtcacctaactctatgt 49826  T

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Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 49765 - 49731
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtca 254  Q
    ||||||||||||| |||||||||||||||||||||    
T  49765 cacaagcattgtgacattgtgattggtcaatgtca 49731  T

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Target: scaffold0161 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 27223 - 27332
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggt 246  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||     
T  27223 gtgacatagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggc 27322  T
Q  247 caatgtcacc 256  Q
    |||| |||||    
T  27323 caatatcacc 27332  T

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Target: scaffold0161; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 27355 - 27299
Alignment:
Q  147 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgctt 203  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgctt 27299  T

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Target: scaffold0047 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 63869 - 63772
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  63869 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgt 63772  T

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Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 63833 - 63878
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctat 265  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||    
T  63833 cacaagcattgtgacattgtgattggccaatgtcacccaactctat 63878  T

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Target: scaffold0180 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 19113 - 19207
Alignment:
Q  135 gatagtatttgagtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 229  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  19113 gatagcatttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaacacaaacatt 19207  T

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Target: scaffold1033 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 2319 - 2265
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 230  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1033; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 2289 - 2336
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgt 2336  T

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Target: scaffold1029 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 2319 - 2265
Alignment:
Q  176 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 230  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1029; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 2289 - 2336
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgt 2336  T

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Target: scaffold0481 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 2913 - 2974
Alignment:
Q  170 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgt 231  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2913 ggtgatattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 2974  T

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Target: scaffold0481; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 2949 - 2902
Alignment:
Q  220 cacaagcattgtggcattgtgattggtcaatgtcacccaactctatgt 267  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  2949 cacaaacattgtgacattgtgattggtcaatatcacccaactctatgt 2902  T

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Target: scaffold0536 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 4909 - 4969
Alignment:
Q  161 ggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaaca 221  Q
    |||||||||||||| || |  |||||||||| | ||||||||||||||||||||| |||||    
T  4909 ggtgacattggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaaca 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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