View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18936_low_58 (Length: 299)
Name: NF18936_low_58
Description: NF18936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18936_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 34901164 - 34901447
Alignment:
| Q |
1 |
aaaagaattgggtaaaatcatcttgagattcataacaaattgcttgatgaactacaatatgtgtatcaattgttgcttcaagtacatcatccctaaatca |
100 |
Q |
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| T |
34901164 |
aaaagaattgggtaaaatcatcttgagattcataacaaattgcttgatgaactacaatatgtgtatcaattgttgcttcaagtacatcatccctaaatca |
34901263 |
T |
|
| Q |
101 |
aatgacattttcatcttaattaaccactgactgatcgaacattcgaccagcaaaatgtttttccatgtcaccattctctaaataaccatattgactattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34901264 |
aatgacattttcatcttaattaaccactgactgatcaaacatttgaccataaaaatgtttttccatgtcaccattctctaaataaccatattgactattg |
34901363 |
T |
|
| Q |
201 |
tatcaacattcattgtcaatgaaaaatccatctttataacttgtattaaatccatcacaaaacaaataagtgaactgcaaatat |
284 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34901364 |
tatcaacattcattctcaatgaaaaatccatctttataacttgtattaaatccatcacaaaacaaataagtgaactgcaaatat |
34901447 |
T |
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