View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18937_high_11 (Length: 330)

Name: NF18937_high_11
Description: NF18937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18937_high_11
NF18937_high_11
[»] chr3 (83 HSPs)
chr3 (1-330)||(43404309-43404657)
chr3 (113-330)||(43402366-43402583)
chr3 (130-330)||(5236815-5237013)
chr3 (203-330)||(55302541-55302667)
chr3 (130-317)||(49200040-49200226)
chr3 (206-330)||(29812749-29812873)
chr3 (204-330)||(54593170-54593296)
chr3 (206-330)||(4569419-4569543)
chr3 (203-330)||(40912802-40912929)
chr3 (206-330)||(6096176-6096300)
chr3 (206-317)||(34490700-34490811)
chr3 (206-330)||(31340617-31340743)
chr3 (191-323)||(7761935-7762067)
chr3 (132-323)||(7764065-7764255)
chr3 (206-330)||(29810554-29810678)
chr3 (203-311)||(44331252-44331360)
chr3 (206-323)||(46173202-46173318)
chr3 (205-319)||(40592352-40592466)
chr3 (191-323)||(45094834-45094967)
chr3 (116-319)||(21711603-21711805)
chr3 (122-318)||(39032044-39032239)
chr3 (206-320)||(44331815-44331929)
chr3 (207-330)||(36029484-36029608)
chr3 (205-319)||(8370059-8370174)
chr3 (205-319)||(16264750-16264865)
chr3 (205-319)||(48438617-48438732)
chr3 (206-299)||(5258533-5258627)
chr3 (205-319)||(8127032-8127146)
chr3 (191-323)||(9636493-9636626)
chr3 (248-319)||(24694779-24694850)
chr3 (205-284)||(36018329-36018408)
chr3 (116-330)||(30709279-30709492)
chr3 (207-319)||(33386247-33386360)
chr3 (219-319)||(40845055-40845156)
chr3 (205-319)||(27027107-27027223)
chr3 (205-319)||(40735112-40735228)
chr3 (205-319)||(47923472-47923588)
chr3 (205-319)||(1735875-1735988)
chr3 (207-319)||(37726076-37726189)
chr3 (116-319)||(40734095-40734297)
chr3 (205-308)||(27038454-27038558)
chr3 (206-296)||(3393292-3393382)
chr3 (207-317)||(27986048-27986159)
chr3 (231-323)||(5260688-5260781)
chr3 (258-319)||(37408197-37408258)
chr3 (116-156)||(27027270-27027310)
chr3 (207-328)||(27453350-27453471)
chr3 (122-172)||(35926038-35926088)
chr3 (206-284)||(51398512-51398590)
chr3 (289-323)||(51398583-51398617)
chr3 (116-153)||(7167825-7167862)
chr3 (116-196)||(16498657-16498735)
chr3 (258-330)||(23198296-23198368)
chr3 (120-173)||(24694673-24694726)
chr3 (265-330)||(25929026-25929091)
chr3 (116-153)||(27974454-27974491)
chr3 (116-173)||(36029639-36029696)
chr3 (116-156)||(27038605-27038645)
chr3 (116-172)||(48438763-48438819)
chr3 (116-154)||(16264895-16264933)
chr3 (268-330)||(23410688-23410750)
chr3 (116-150)||(37726244-37726278)
chr3 (119-153)||(40845221-40845255)
chr3 (258-330)||(1306370-1306442)
chr3 (116-153)||(4599050-4599087)
chr3 (116-153)||(4601271-4601308)
chr3 (116-153)||(10055825-10055862)
chr3 (116-153)||(10058047-10058084)
chr3 (116-153)||(10060269-10060306)
chr3 (116-153)||(10062491-10062528)
chr3 (116-153)||(10064713-10064750)
chr3 (116-153)||(10066935-10066972)
chr3 (116-153)||(10210998-10211035)
chr3 (124-153)||(22172690-22172719)
chr3 (258-330)||(23200495-23200567)
chr3 (116-153)||(27985978-27986015)
chr3 (124-153)||(28501180-28501209)
chr3 (124-153)||(28503347-28503376)
chr3 (289-330)||(36018401-36018442)
chr3 (124-153)||(40372284-40372313)
chr3 (116-152)||(37408057-37408093)
chr3 (116-156)||(40592265-40592305)
chr3 (116-156)||(40735026-40735066)
[»] chr6 (45 HSPs)
chr6 (113-313)||(603612-603812)
chr6 (123-330)||(22964089-22964295)
chr6 (123-330)||(23824098-23824304)
chr6 (206-329)||(3809286-3809406)
chr6 (206-323)||(21593134-21593251)
chr6 (206-317)||(9183381-9183492)
chr6 (130-318)||(33211555-33211740)
chr6 (116-330)||(24714763-24714975)
chr6 (210-330)||(26661421-26661541)
chr6 (210-330)||(26767392-26767512)
chr6 (219-330)||(24435567-24435678)
chr6 (205-319)||(31979919-31980033)
chr6 (116-319)||(10076685-10076886)
chr6 (205-317)||(5571845-5571957)
chr6 (205-319)||(18234485-18234600)
chr6 (231-323)||(5413813-5413906)
chr6 (116-330)||(21272482-21272695)
chr6 (206-323)||(5411598-5411716)
chr6 (231-323)||(5406563-5406656)
chr6 (231-323)||(5410888-5410981)
chr6 (231-323)||(16452805-16452898)
chr6 (231-323)||(30834902-30834995)
chr6 (205-319)||(31086052-31086168)
chr6 (205-318)||(5017075-5017190)
chr6 (206-316)||(5407280-5407391)
chr6 (231-316)||(33160726-33160812)
chr6 (210-275)||(17759427-17759492)
chr6 (228-317)||(26954674-26954763)
chr6 (231-323)||(31405039-31405132)
chr6 (265-323)||(16452694-16452752)
chr6 (248-317)||(23896736-23896805)
chr6 (116-156)||(5016989-5017029)
chr6 (116-156)||(5571769-5571809)
chr6 (116-156)||(31085966-31086006)
chr6 (248-319)||(5757103-5757174)
chr6 (124-155)||(14737113-14737144)
chr6 (124-154)||(5266595-5266625)
chr6 (116-153)||(6136490-6136527)
chr6 (124-153)||(11857510-11857539)
chr6 (124-153)||(14741954-14741983)
chr6 (124-153)||(22010217-22010246)
chr6 (124-153)||(30125046-30125075)
chr6 (116-153)||(34166686-34166723)
chr6 (258-317)||(6097785-6097845)
chr6 (116-156)||(18234647-18234687)
[»] scaffold0286 (1 HSPs)
scaffold0286 (116-330)||(10938-11150)
[»] chr8 (48 HSPs)
chr8 (116-330)||(42435567-42435779)
chr8 (113-330)||(4282942-4283138)
chr8 (206-323)||(15212472-15212589)
chr8 (130-317)||(27810909-27811095)
chr8 (206-330)||(43036109-43036233)
chr8 (206-330)||(30143028-30143152)
chr8 (206-323)||(12703004-12703121)
chr8 (206-327)||(22976002-22976123)
chr8 (191-323)||(1746583-1746716)
chr8 (206-330)||(4731344-4731468)
chr8 (206-317)||(11383474-11383585)
chr8 (206-317)||(40221232-40221343)
chr8 (203-317)||(4733508-4733622)
chr8 (206-319)||(4743562-4743676)
chr8 (207-323)||(34254693-34254810)
chr8 (191-323)||(34256869-34257002)
chr8 (206-318)||(10014845-10014957)
chr8 (205-319)||(19175313-19175428)
chr8 (248-317)||(4696252-4696321)
chr8 (265-330)||(33351895-33351960)
chr8 (205-328)||(5702060-5702184)
chr8 (191-317)||(42497885-42498012)
chr8 (192-317)||(19945710-19945836)
chr8 (171-316)||(31217907-31218053)
chr8 (231-323)||(17982363-17982456)
chr8 (231-323)||(44303564-44303657)
chr8 (116-156)||(5701972-5702012)
chr8 (269-319)||(23799221-23799271)
chr8 (203-313)||(1345744-1345855)
chr8 (116-173)||(4456555-4456612)
chr8 (116-153)||(7412894-7412931)
chr8 (231-323)||(19948686-19948779)
chr8 (116-152)||(3439108-3439144)
chr8 (124-155)||(10688646-10688677)
chr8 (124-154)||(25689589-25689619)
chr8 (124-153)||(4759562-4759591)
chr8 (124-153)||(10683767-10683796)
chr8 (116-153)||(15290163-15290200)
chr8 (116-153)||(15470532-15470569)
chr8 (124-153)||(18870049-18870078)
chr8 (124-153)||(25327692-25327721)
chr8 (124-153)||(30656225-30656254)
chr8 (258-330)||(31043049-31043121)
chr8 (124-153)||(33037315-33037344)
chr8 (124-153)||(36979957-36979986)
chr8 (124-153)||(39784353-39784382)
chr8 (116-153)||(42575852-42575889)
chr8 (116-156)||(23799112-23799152)
[»] chr4 (64 HSPs)
chr4 (116-330)||(6655336-6655548)
chr4 (206-330)||(26363733-26363857)
chr4 (203-330)||(9927819-9927946)
chr4 (208-330)||(34570772-34570894)
chr4 (206-330)||(37740312-37740436)
chr4 (206-330)||(50674422-50674546)
chr4 (206-317)||(12745787-12745899)
chr4 (203-330)||(27417527-27417654)
chr4 (205-319)||(36314811-36314925)
chr4 (205-319)||(36329020-36329134)
chr4 (206-330)||(40630452-40630576)
chr4 (206-317)||(46570115-46570226)
chr4 (116-319)||(54867581-54867782)
chr4 (203-323)||(41639030-41639150)
chr4 (231-323)||(54200271-54200363)
chr4 (117-319)||(25861527-25861728)
chr4 (207-323)||(5429367-5429483)
chr4 (122-323)||(6742915-6743114)
chr4 (220-330)||(50263274-50263383)
chr4 (206-315)||(52095733-52095843)
chr4 (207-319)||(8689079-8689192)
chr4 (206-303)||(54882508-54882605)
chr4 (205-319)||(5268780-5268895)
chr4 (231-330)||(29254205-29254304)
chr4 (171-284)||(56179028-56179141)
chr4 (187-319)||(36994227-36994359)
chr4 (206-330)||(2209188-2209300)
chr4 (123-284)||(35661826-35661985)
chr4 (210-284)||(26176028-26176102)
chr4 (116-319)||(16628366-16628568)
chr4 (205-319)||(16622873-16622989)
chr4 (260-318)||(5148080-5148138)
chr4 (205-317)||(5396271-5396384)
chr4 (231-323)||(52083022-52083115)
chr4 (231-323)||(52094029-52094122)
chr4 (116-319)||(3777950-3778152)
chr4 (193-284)||(5370479-5370571)
chr4 (206-319)||(5143662-5143776)
chr4 (116-173)||(16622787-16622844)
chr4 (116-156)||(38151931-38151971)
chr4 (207-330)||(3909784-3909906)
chr4 (116-153)||(5143809-5143846)
chr4 (116-153)||(8689057-8689094)
chr4 (120-156)||(9194161-9194197)
chr4 (116-156)||(10047929-10047969)
chr4 (213-284)||(12739942-12740014)
chr4 (213-284)||(12748148-12748220)
chr4 (124-154)||(29761181-29761211)
chr4 (231-288)||(30000873-30000931)
chr4 (124-153)||(3814548-3814577)
chr4 (116-153)||(5148244-5148281)
chr4 (116-153)||(5268712-5268749)
chr4 (124-153)||(9223927-9223956)
chr4 (124-153)||(9228714-9228743)
chr4 (124-153)||(18856252-18856281)
chr4 (124-153)||(18860464-18860493)
chr4 (124-153)||(24742520-24742549)
chr4 (248-328)||(31985258-31985338)
chr4 (116-173)||(36314724-36314781)
chr4 (116-173)||(36328933-36328990)
chr4 (124-153)||(51520993-51521022)
chr4 (124-153)||(56141539-56141568)
chr4 (289-329)||(35661978-35662018)
chr4 (133-173)||(54200399-54200439)
[»] chr1 (45 HSPs)
chr1 (130-328)||(44454771-44454967)
chr1 (116-330)||(37033645-37033857)
chr1 (130-319)||(31658850-31659037)
chr1 (207-317)||(11348188-11348298)
chr1 (206-330)||(193080-193204)
chr1 (232-317)||(29135762-29135847)
chr1 (116-330)||(37070158-37070371)
chr1 (132-323)||(3206599-3206790)
chr1 (206-330)||(28220584-28220709)
chr1 (113-217)||(37503930-37504034)
chr1 (231-330)||(30476806-30476905)
chr1 (132-319)||(3188964-3189151)
chr1 (132-319)||(3197781-3197968)
chr1 (206-330)||(28223779-28223904)
chr1 (206-323)||(49918035-49918152)
chr1 (205-317)||(37879480-37879592)
chr1 (116-319)||(13598802-13599004)
chr1 (207-319)||(13604205-13604318)
chr1 (171-323)||(20762322-20762475)
chr1 (206-330)||(10924909-10925033)
chr1 (231-323)||(13547672-13547763)
chr1 (231-323)||(13549583-13549674)
chr1 (206-330)||(1833207-1833332)
chr1 (206-330)||(4553006-4553130)
chr1 (205-318)||(3282109-3282223)
chr1 (207-312)||(3156554-3156658)
chr1 (231-323)||(13316683-13316776)
chr1 (205-330)||(16455331-16455456)
chr1 (265-319)||(29652215-29652269)
chr1 (248-319)||(21536195-21536266)
chr1 (116-156)||(21536133-21536173)
chr1 (231-319)||(46064629-46064717)
chr1 (116-179)||(16124201-16124264)
chr1 (116-196)||(13659799-13659877)
chr1 (116-173)||(29652361-29652418)
chr1 (116-152)||(13604116-13604152)
chr1 (207-317)||(19361022-19361134)
chr1 (130-173)||(10924835-10924878)
chr1 (266-317)||(15820053-15820104)
chr1 (207-319)||(26644483-26644593)
chr1 (124-154)||(24793694-24793724)
chr1 (124-153)||(39446025-39446054)
chr1 (124-153)||(41391128-41391157)
chr1 (124-153)||(44023405-44023434)
chr1 (116-156)||(3282270-3282310)
[»] scaffold0014 (1 HSPs)
scaffold0014 (206-330)||(80859-80983)
[»] chr7 (56 HSPs)
chr7 (206-330)||(47676494-47676618)
chr7 (130-330)||(26416925-26417123)
chr7 (206-323)||(27347610-27347726)
chr7 (206-323)||(47674308-47674425)
chr7 (206-330)||(6360488-6360612)
chr7 (203-330)||(14070191-14070319)
chr7 (203-330)||(14380219-14380347)
chr7 (207-319)||(2647280-2647392)
chr7 (231-330)||(2761660-2761759)
chr7 (206-323)||(4585847-4585964)
chr7 (207-319)||(4538920-4539032)
chr7 (206-330)||(18126331-18126454)
chr7 (206-317)||(43863947-43864058)
chr7 (203-330)||(48489113-48489240)
chr7 (132-316)||(23554653-23554836)
chr7 (206-330)||(32358412-32358536)
chr7 (206-317)||(2389760-2389871)
chr7 (133-323)||(19495585-19495774)
chr7 (231-330)||(1113367-1113466)
chr7 (205-319)||(33332031-33332145)
chr7 (130-297)||(30026391-30026562)
chr7 (231-330)||(48491289-48491388)
chr7 (171-323)||(4178425-4178578)
chr7 (129-317)||(4796175-4796362)
chr7 (116-319)||(21983644-21983846)
chr7 (234-316)||(35853626-35853709)
chr7 (231-323)||(24515125-24515218)
chr7 (219-284)||(31733354-31733419)
chr7 (206-330)||(6570279-6570403)
chr7 (239-330)||(46515923-46516014)
chr7 (116-324)||(21989304-21989510)
chr7 (205-318)||(49092093-49092208)
chr7 (258-319)||(44847760-44847821)
chr7 (120-173)||(46515827-46515880)
chr7 (116-172)||(79936-79992)
chr7 (206-284)||(29608220-29608299)
chr7 (206-252)||(48599932-48599978)
chr7 (258-299)||(2479757-2479798)
chr7 (116-153)||(31109090-31109127)
chr7 (241-323)||(29990775-29990858)
chr7 (248-319)||(47264044-47264115)
chr7 (131-173)||(4539064-4539106)
chr7 (124-153)||(2058547-2058576)
chr7 (207-283)||(2361562-2361639)
chr7 (277-330)||(3050501-3050554)
chr7 (124-153)||(4873664-4873693)
chr7 (124-153)||(12406800-12406829)
chr7 (124-153)||(20357056-20357085)
chr7 (124-153)||(21640366-21640395)
chr7 (207-330)||(25767312-25767436)
chr7 (289-330)||(29608292-29608333)
chr7 (258-330)||(39731095-39731167)
chr7 (116-153)||(47264209-47264246)
chr7 (205-319)||(79791-79907)
chr7 (116-148)||(21646590-21646622)
chr7 (124-152)||(24023847-24023875)
[»] chr5 (45 HSPs)
chr5 (206-330)||(42426593-42426717)
chr5 (205-330)||(13487890-13488013)
chr5 (206-330)||(32636509-32636634)
chr5 (231-330)||(27015025-27015124)
chr5 (130-316)||(13239364-13239548)
chr5 (231-330)||(19806117-19806216)
chr5 (231-317)||(535614-535700)
chr5 (206-330)||(5057517-5057641)
chr5 (130-284)||(30683312-30683464)
chr5 (206-316)||(37438831-37438942)
chr5 (205-330)||(11916552-11916678)
chr5 (116-319)||(14520631-14520833)
chr5 (205-319)||(16650991-16651105)
chr5 (231-317)||(39468903-39468989)
chr5 (268-330)||(38746535-38746597)
chr5 (206-284)||(42428822-42428900)
chr5 (231-323)||(25412472-25412565)
chr5 (203-284)||(38746453-38746534)
chr5 (220-319)||(12083773-12083873)
chr5 (231-323)||(13342771-13342864)
chr5 (205-319)||(31004734-31004849)
chr5 (239-316)||(30182306-30182384)
chr5 (129-217)||(533412-533499)
chr5 (129-217)||(535534-535621)
chr5 (267-319)||(16649992-16650044)
chr5 (231-330)||(533492-533579)
chr5 (206-296)||(40146735-40146825)
chr5 (277-317)||(40146818-40146858)
chr5 (248-319)||(9352959-9353030)
chr5 (122-156)||(12083677-12083711)
chr5 (241-316)||(36074416-36074492)
chr5 (258-318)||(36931984-36932044)
chr5 (122-153)||(15045222-15045253)
chr5 (124-155)||(31180771-31180802)
chr5 (124-155)||(43592795-43592826)
chr5 (116-150)||(36931864-36931898)
chr5 (124-153)||(1456666-1456695)
chr5 (116-173)||(11916465-11916522)
chr5 (124-153)||(27450352-27450381)
chr5 (124-153)||(29402578-29402607)
chr5 (124-153)||(30631891-30631920)
chr5 (124-153)||(43599261-43599290)
chr5 (124-153)||(43604753-43604782)
chr5 (124-153)||(43610245-43610274)
chr5 (258-317)||(16407803-16407863)
[»] chr2 (46 HSPs)
chr2 (206-323)||(2837209-2837326)
chr2 (132-319)||(34389252-34389438)
chr2 (205-319)||(20522624-20522738)
chr2 (206-318)||(36318379-36318492)
chr2 (132-316)||(36988447-36988630)
chr2 (203-330)||(35447460-35447586)
chr2 (205-319)||(21630347-21630461)
chr2 (193-319)||(14698578-14698704)
chr2 (205-319)||(33528204-33528319)
chr2 (205-319)||(39483278-39483393)
chr2 (206-323)||(45099440-45099558)
chr2 (231-323)||(2334782-2334875)
chr2 (205-319)||(33118537-33118651)
chr2 (231-323)||(5723619-5723712)
chr2 (208-284)||(39284585-39284661)
chr2 (205-319)||(23078052-23078167)
chr2 (231-323)||(4503497-4503590)
chr2 (205-309)||(17865589-17865694)
chr2 (207-319)||(28258760-28258873)
chr2 (130-263)||(29867491-29867622)
chr2 (122-319)||(10706752-10706948)
chr2 (206-284)||(6595398-6595477)
chr2 (231-323)||(36206030-36206123)
chr2 (116-156)||(8389644-8389684)
chr2 (209-319)||(8389732-8389844)
chr2 (129-196)||(17057747-17057813)
chr2 (129-196)||(17085730-17085796)
chr2 (122-172)||(21630492-21630542)
chr2 (122-156)||(23077971-23078005)
chr2 (207-330)||(30833031-30833155)
chr2 (289-330)||(39284654-39284695)
chr2 (116-156)||(33528118-33528158)
chr2 (116-156)||(39483440-39483480)
chr2 (265-319)||(13569732-13569785)
chr2 (293-323)||(29867641-29867671)
chr2 (258-330)||(3492143-3492215)
chr2 (124-153)||(9295890-9295919)
chr2 (124-153)||(11098415-11098444)
chr2 (124-153)||(14292068-14292097)
chr2 (206-263)||(17863878-17863935)
chr2 (116-153)||(28258690-28258727)
chr2 (124-153)||(32247295-32247324)
chr2 (116-153)||(36757438-36757475)
chr2 (124-153)||(39811505-39811534)
chr2 (124-153)||(44310499-44310528)
chr2 (116-172)||(20522769-20522825)
[»] scaffold0066 (1 HSPs)
scaffold0066 (206-319)||(20784-20897)
[»] scaffold0176 (1 HSPs)
scaffold0176 (210-317)||(17635-17742)
[»] scaffold0006 (6 HSPs)
scaffold0006 (205-319)||(2895-3010)
scaffold0006 (116-319)||(6087-6289)
scaffold0006 (207-319)||(132862-132975)
scaffold0006 (116-196)||(149560-149638)
scaffold0006 (116-156)||(3057-3097)
scaffold0006 (116-152)||(132773-132809)
[»] scaffold0002 (1 HSPs)
scaffold0002 (206-323)||(434217-434336)
[»] scaffold0087 (2 HSPs)
scaffold0087 (207-319)||(36415-36528)
scaffold0087 (231-319)||(43568-43657)
[»] scaffold0466 (1 HSPs)
scaffold0466 (231-318)||(6820-6907)
[»] scaffold0016 (1 HSPs)
scaffold0016 (206-316)||(114272-114382)
[»] scaffold0140 (1 HSPs)
scaffold0140 (258-318)||(8052-8112)
[»] scaffold0098 (2 HSPs)
scaffold0098 (248-319)||(45600-45671)
scaffold0098 (116-153)||(45746-45783)
[»] scaffold0491 (3 HSPs)
scaffold0491 (258-330)||(11520-11592)
scaffold0491 (258-317)||(9087-9147)
scaffold0491 (114-150)||(11698-11734)
[»] scaffold0036 (1 HSPs)
scaffold0036 (116-172)||(86134-86190)
[»] scaffold0665 (1 HSPs)
scaffold0665 (124-155)||(8214-8245)
[»] scaffold1455 (1 HSPs)
scaffold1455 (124-153)||(1737-1766)
[»] scaffold0510 (1 HSPs)
scaffold0510 (248-297)||(1235-1284)
[»] scaffold0464 (1 HSPs)
scaffold0464 (124-153)||(888-917)
[»] scaffold0135 (1 HSPs)
scaffold0135 (124-153)||(34582-34611)


Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 43404657 - 43404309
Alignment:
Q  1 atgtccaaaaatatagcaagatgtacagaacaaagaaaatcttccaaatcaattctgacaaataatacatatctttttcgttcaaacaaaatgccaccat 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43404657 atgtccaataatgtagcaagatgtacagaacaaagaaaatcttccaaatcaattctgacaaataatacatatttttctcgttcaaacaaaatgccaccat 43404558  T
Q  101 aaagagtttgcgcaat-------------------tgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatg 181  Q
    ||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  43404557 aaagagtttgcgcaatgttgtaaagtgcattcaattgtgttttggaagaacagagaaatcgtgacacgatttcataagcctgtcacgatttttggtagtg 43404458  T
Q  182 ccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcg 281  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  43404457 ccgagagcatgttttctggatgttcaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggtcggtcg 43404358  T
Q  282 taccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43404357 taccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 43404309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 113 - 330
Target Start/End: Complemental strand, 43402583 - 43402366
Alignment:
Q  113 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 212  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||| | | |||| ||||||||||||||| ||||||||||    
T  43402583 caattgtgttttggaagaatagagaaatcgtgaaacgatttcataagcgtgtcatgatttttggtagtaccgagagcatgttttctggatgttcaatcgt 43402484  T
Q  213 gacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  43402483 gacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcaccaaacgtgtcac 43402384  T
Q  313 gatttgggaaatcgtgac 330  Q
    |||||||||||| |||||    
T  43402383 gatttgggaaattgtgac 43402366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 130 - 330
Target Start/End: Complemental strand, 5237013 - 5236815
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    ||||||||||||||||||||||||||||||  |||||||||||  ||  ||||||| |||||||||||||   || |||||||||||| |||||||| ||    
T  5237013 aacagagaaatcgtgacacgatttcataagcgtgtcacgattt--ggctatgccgagagcatgttttctgagtgtccaatcgtgacacaattttgggaaa 5236916  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtga 329  Q
    |||||||| |||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  5236915 acgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggcaaaacgtga 5236816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 55302667 - 55302541
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  55302667 gttcaatcgtgacacgattt-gggaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcacca 55302569  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||||||||||||    
T  55302568 aacgtgtcacgatttgggaaatcgtgac 55302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 49200226 - 49200040
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtgacaccattttgggga 228  Q
    |||||||||||||||||||||||| | | |  ||||||||||||  | |||||||  |||||||||| | ||  || |||||||||||| || |||||||    
T  49200226 aacagagaaatcgtgacacgattttacaggcgtgtcacgatttt--gcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgatgttgggga 49200129  T
Q  229 aacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  49200128 aacgtgacacgattttcggcttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 29812749 - 29812873
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  29812749 caatcgtgacacgattttgggaaaacgtgacacgatttttgtcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 29812848  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||| ||||||    
T  29812849 gtgtcacgatttggaaaaacgtgac 29812873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 54593170 - 54593296
Alignment:
Q  204 ttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||||||||||| | |||||||| |||||||||| |||||||  ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||    
T  54593170 ttcaatcgtgactcaattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacgcaccaa 54593269  T
Q  304 acgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||| ||||    
T  54593270 acgtgtcacgatttgggaaatcatgac 54593296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 4569419 - 4569543
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  4569419 caatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacc 4569518  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||| ||  ||||| ||||||    
T  4569519 gtgtcacggttgtggaaaacgtgac 4569543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 330
Target Start/End: Original strand, 40912802 - 40912929
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    |||||||||||| || |||||||| |||||||||| ||||||||||||| ||||||||||| | ||||||||  ||||||| ||||| ||||||||||||    
T  40912802 gttcaatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacgcacca 40912901  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||||||| ||||    
T  40912902 aacgtgtcacgatttgggaaatcatgac 40912929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 6096300 - 6096176
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||  ||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||     
T  6096300 caattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaat 6096201  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||| ||||    
T  6096200 gtgtcacgatttgggaaatcatgac 6096176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 34490700 - 34490811
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||  |||||||||| ||||||||||||  ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  34490700 caatcgtgacacgattttggaaaaacgtgacacgattttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaac 34490799  T
Q  306 gtgtcacgattt 317  Q
    ||||||||||||    
T  34490800 gtgtcacgattt 34490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 31340743 - 31340617
Alignment:
Q  206 caatcgtgacaccattttggggaaa-cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||  |||||||| ||| | ||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31340743 caatcgtgacatgattttgggaaaaacatgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaa 31340644  T
Q  305 cgtgtcacga-tttgggaaatcgtgac 330  Q
    |||| ||||| ||||||||||||||||    
T  31340643 cgtgacacgattttgggaaatcgtgac 31340617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 191 - 323
Target Start/End: Original strand, 7761935 - 7762067
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||| ||||||||||| |||||||||||||    
T  7761935 tgttttcagggcgtccaatcgtgacacgattttggg-aaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 7762033  T
Q  290 gtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||||| ||| |||| ||||||| ||||||    
T  7762034 gtcgtacgcatcaatcgtgacacgattggggaaa 7762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 132 - 323
Target Start/End: Original strand, 7764065 - 7764255
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    ||||||||||||||||||||||   |||  |||||||| ||| || |||| ||| ||| ||||||| || ||| |||||||||||| |||||||| ||||    
T  7764065 cagagaaatcgtgacacgatttggcaagcgtgtcacgagttt-ggtaatggcgagagc-tgttttcagggcgtccaatcgtgacacgattttgggaaaac 7764162  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||| |||||| |||||| |||||||| |||  |||||||||| ||||||||||||||||||||||| ||| |||| || |||| ||||||    
T  7764163 gtgacacgatttttggcttgttgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgattggggaaa 7764255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 29810554 - 29810678
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| ||||| |  ||||||  ||  ||||| |||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  29810554 caatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 29810653  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||| ||||||    
T  29810654 gtgtcacgatttgggaaaacgtgac 29810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 44331252 - 44331360
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||||||| ||| |||||| |||||| ||||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||    
T  44331252 gttcaatcgtgacacgattttgggaaaaagtgacacgatttttggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcacca 44331351  T
Q  303 aacgtgtca 311  Q
    ||| |||||    
T  44331352 aacttgtca 44331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 46173202 - 46173318
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||| ||||| ||||  ||||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||| |    
T  46173202 caatcgtgacacgattttgggaaaacatgacacgattc-cggcttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacc 46173300  T
Q  306 gtgtcacgatttgggaaa 323  Q
    ||||||||| ||||||||    
T  46173301 gtgtcacgaattgggaaa 46173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 40592352 - 40592466
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| |||||||||| |||||||  |||||||| || |||| ||||||||||| ||||||||||||| |||||| ||||||     
T  40592352 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaat 40592451  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  40592452 cgtgtcacgatttgg 40592466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 323
Target Start/End: Original strand, 45094834 - 45094967
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||| |||||||| || ||||||| |||||| |||||| |||||||| ||| ||||||||||| |||||||||||||    
T  45094834 tgttttcagggcgtccaatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtaccttgg 45094933  T
Q  290 gtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
      |||||||| ||| |||| ||||||| ||||||    
T  45094934 aacgtacgcatcaatcgtgacacgattggggaaa 45094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 21711805 - 21711603
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatg-ttttctggacgttcaatcgtga 214  Q
    ||||| ||||||||||||||||||||||||||||||||| | |   ||||||||||||     | || |  |||||| ||||| ||  | |||||||||     
T  21711805 ttgtggtttggaagaacagagaaatcgtgacacgatttcttcaacgtgtcacgattttcc---aggcagtgagcatggttttcagggtgctcaatcgtgt 21711709  T
Q  215 caccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacg 313  Q
    ||| |||||||| ||||||||||  ||||||   ||||||| | | |||| | ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21711708 cacgattttgggaaaacgtgacacaattttcaaacttgctgagtacgttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacg 21711609  T
Q  314 atttgg 319  Q
    ||||||    
T  21711608 atttgg 21711603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 39032044 - 39032239
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttct--ggacgttcaatcgtgacacca 219  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||  |    || |  |||||| |||||  ||  | ||||||||| ||| |    
T  39032044 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttcag----gcagggagcatggtttctcagggtgctcaatcgtgtcacga 39032139  T
Q  220 ttttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    ||||||| ||| |||||| |||||||   ||||||||| | |||| |||||||| || ||||||||||||||||||||||||||| |||| |||||||||    
T  39032140 ttttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttg 39032239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 44331929 - 44331815
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||  |||||||||| |||||| ||||| ||||| | |||| || ||||| ||  ||||||||||||||||||| |||||||     
T  44331929 caatcgtgacacgattttggaaaaacgtgacacgatttttggcttcctgggtacgttttcaagataaagttagtcgtaccttgggtcgtacacaccaaat 44331830  T
Q  306 gtgtcacgatttggg 320  Q
    |||||||||||||||    
T  44331829 gtgtcacgatttggg 44331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 36029608 - 36029484
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||| ||| |||||||  |||||||||| |||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| |    
T  36029608 aatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36029509  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||| ||| | ||| ||||||    
T  36029508 gtgtcacggtttagaaaaacgtgac 36029484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 8370059 - 8370174
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggc-ttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||    |||||||| | ||||  |||||||||| ||||||||||||||| |||||||||||    
T  8370059 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcgtaccttgggttgtacgcaccaa 8370158  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  8370159 tcgtgtcacgatttgg 8370174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 16264865 - 16264750
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   || |||||| | |||| ||||||||||| ||||||||||||||| |||||||||||    
T  16264865 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcgtaccttgggtggtacgcaccaa 16264766  T
Q  304 acgtgtcacgatttgg 319  Q
     |||| ||||||||||    
T  16264765 tcgtgccacgatttgg 16264750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 48438732 - 48438617
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||| |||| ||| ||||||||||||||||||| |||||||   |||| |||| | |||| ||||||||||| ||| ||||||||| |||||||||||||    
T  48438732 tcaaccgtgtcacgattttggggaaacgtgacacgattttcaaacttgatgggtacgttttcaggataaggttggttgtaccttggatcgtacgcaccaa 48438633  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  48438632 tcgtgtcacgatttgg 48438617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 5258627 - 5258533
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgca 299  Q
    |||||||||||| |||||||| || ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||  |||||||||    
T  5258627 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgca 5258533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 8127146 - 8127032
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| ||  |||||| |||||||  |||||| || | |||| ||||||||||| ||||||| |||||||||||| ||||||     
T  8127146 tcaatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttcaggataaggttggtcgtatcttgggtcgtacacaccaac 8127047  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  8127046 cgtgtcacgatttgg 8127032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 323
Target Start/End: Complemental strand, 9636626 - 9636493
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||  |||||||| || | ||||| |||||| |||||| ||| |||| ||| ||||||||||| |||||||||||||    
T  9636626 tgttttcagggcgtccaatcgtgacatgattttgggaaatcatgacacgatttttggcttgatggacaagattttcaggataaggttggtcgtaccttgg 9636527  T
Q  290 gtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
     ||||||||| ||| |||| ||||||| ||||||    
T  9636526 atcgtacgcatcaatcgtggcacgattggggaaa 9636493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 24694779 - 24694850
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||||| || |||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  24694779 cttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttgg 24694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 36018329 - 36018408
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||||||||||||| ||||  |||||||||| ||||||||    
T  36018329 tcaatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggcacgtttttaggataaggttggtcgtac 36018408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 330
Target Start/End: Original strand, 30709279 - 30709492
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattttt-ggaaatgccgaaagcatgtttt-ctggacgttcaatcgtg 213  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||| |||||  || | ||     |||||| ||| | ||  |||||||||||    
T  30709279 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacaattttcaggtagtg-----agcatggtttgcagggtgttcaatcgtg 30709373  T
Q  214 acaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtca 311  Q
     ||| |||||| | ||||||||||  ||||||   ||||||||| | ||||  ||||||||| | |||| |||||||||||||||||||||| |||||||    
T  30709374 tcacgattttgagaaaacgtgacacaattttcaaacttgctgggtacgtttttcaggataagattggtcttaccttgggtcgtacgcaccaatcgtgtca 30709473  T
Q  312 cgatttgggaaatcgtgac 330  Q
    |||||||| ||| ||||||    
T  30709474 cgatttggaaaaacgtgac 30709492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 33386247 - 33386360
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| |||||| |||| ||||||| |||||||   ||||||||  |||||| ||||||||||| ||||||| ||||||||||||| | ||| |    
T  33386247 aatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 33386346  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  33386347 gtgacacgatttgg 33386360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 40845156 - 40845055
Alignment:
Q  219 attttggggaaacgtgacatgattttcggcttgctgggcaagtttcc-aggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||||||| |||||||||| |||||||  | |||||| || ||||   |||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  40845156 attttgggaaaacgtgacacgattttcaacgtgctggacacgttttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgattt 40845057  T
Q  318 gg 319  Q
    ||    
T  40845056 gg 40845055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 27027223 - 27027107
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggca-agtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   ||||||||  | | ||| ||||||||||| ||||||||||||||||||||||||||    
T  27027223 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcacca 27027124  T
Q  303 aacgtgtcacgatttgg 319  Q
    | |||| |||| |||||    
T  27027123 atcgtgccacgttttgg 27027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 40735112 - 40735228
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggca-agtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   ||||||||  | | ||| ||||||||||| ||||||||||||||||||||||||||    
T  40735112 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgggtcgtacgcacca 40735211  T
Q  303 aacgtgtcacgatttgg 319  Q
    | ||||| | |||||||    
T  40735212 atcgtgttatgatttgg 40735228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 47923472 - 47923588
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| |||  ||||||| |||||||||| |||||||   ||||||||| | ||||  ||||||||||| ||||||||||||||| ||||||| ||    
T  47923472 tcaatcgtgtcacatttttgggaaaacgtgacacgattttcaaacttgctgggtacgtttttcaggataaggttggtcgtaccttgggttgtacgcatca 47923571  T
Q  303 aacgtgtcacgatttgg 319  Q
    | |||||||||||||||    
T  47923572 atcgtgtcacgatttgg 47923588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 1735875 - 1735988
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| |||||||||| |||||||  ||||   | ||  |||  |||||||||| ||||||||||||||| |||||||||||     
T  1735875 tcaatcgtg-cacgattttgggaaaacgtgacacgattttcaacttgaatgacacatttttaggataaggttggtcgtaccttgggttgtacgcaccaat 1735973  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  1735974 cgtgtcacgatttgg 1735988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 37726189 - 37726076
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| |||||| |||| ||||||| |||||||   |||| |||  |||||| ||||||||||| |||||||| |||||||||||| | ||| |    
T  37726189 aatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggttggtcgtacattgggtcgtacgtatcaatc 37726090  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  37726089 gtgacacgatttgg 37726076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 319
Target Start/End: Original strand, 40734095 - 40734297
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||      | || |  |||||| ||| | ||  | |||||||||     
T  40734095 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacatgtcacgatttcc----aagcagtgagcatggtttgcagggtgctcaatcgtgt 40734190  T
Q  215 caccattttggggaaacgtgacatgattttcgg-cttgctgggca-agtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
    ||| |||||||| |||||||||| |||||||   |||| |||  | | ||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||    
T  40734191 cacgattttgggaaaacgtgacacgattttcaaacttgttggctacatttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcac 40734290  T
Q  313 gatttgg 319  Q
    |||||||    
T  40734291 gatttgg 40734297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 27038558 - 27038454
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||||| || ||| |||||||| ||| |||||| |||||||   |||| |||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  27038558 tcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgttgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 27038459  T
Q  304 acgtg 308  Q
     ||||    
T  27038458 tcgtg 27038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 3393292 - 3393382
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtac 296  Q
    |||||||||||| |||||||| || ||||||| |||||| ||||||||||||||| ||| |||||||| || |||||||||| || ||||||    
T  3393292 caatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataa-gttggtcgtacctaggatcgtac 3393382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 27986048 - 27986159
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| ||| || |||| ||||||| |||||||   ||||||||  |||||| ||||||||||| ||||||| ||||||||||||| | ||| |    
T  27986048 aatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatc 27986147  T
Q  306 gtgtcacgattt 317  Q
    ||| ||||||||    
T  27986148 gtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 5260781 - 5260688
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| |||||| |||||||| ||| ||||||||||| |||||||| |||| ||||||||| |||  ||| ||||||| ||||||    
T  5260781 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtactttggatcgtacgcatcaattgtggcacgattggggaaa 5260688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 37408197 - 37408258
Alignment:
Q  258 aagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||| ||||||||||| ||||||||||||||||||||| | ||| |||| ||||||||||    
T  37408197 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg 37408258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 27027310 - 27027270
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27027310 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 27027270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 328
Target Start/End: Complemental strand, 27453471 - 27453350
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||  ||| || |||| ||||||| |||||||   ||||||||  |||||| ||||||||||| |||||||||||| | |||||| | ||| |    
T  27453471 aatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgtgacgtacgtatcaatc 27453372  T
Q  306 gtgtcacgatttgggaaatcgtg 328  Q
    ||| |||||||| ||||||||||    
T  27453371 gtgacacgattt-ggaaatcgtg 27453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 35926088 - 35926038
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  35926088 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 35926038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 51398512 - 51398590
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||| ||||||| |||||||| ||||||||||  |||||||| ||| |||||||||||  |||||| ||| ||||||||    
T  51398512 caattgtgacacgattttgggaaaacgtgacacaattttcggtttgttgggcaagtttttaggatatggttggtcgtac 51398590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 51398583 - 51398617
Alignment:
Q  289 ggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||||||||||||||||||||||||||||||    
T  51398583 ggtcgtacgcaccaaacgtgtcacgatttgggaaa 51398617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 7167862 - 7167825
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  7167862 ttgtgttctggaagaacagagaaatcgtgacacgattt 7167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 16498657 - 16498735
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 196  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  16498657 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 16498735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 23198368 - 23198296
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||| | |||||||||||| | |||||| ||||| |||| |||||||| ||||||||||||    
T  23198368 aagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgattt-ggaaatcgtgac 23198296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 24694673 - 24694726
Alignment:
Q  120 gttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    |||||||||||||||||||||||||| |||||||||| |   ||||||||||||    
T  24694673 gttttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgatttt 24694726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 25929026 - 25929091
Alignment:
Q  265 caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||| |||||||| |||| ||||||| ||||| ||||| |||||||||  |||||||||    
T  25929026 caggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgac 25929091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 27974454 - 27974491
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  27974454 ttgtggtttggaagaacagagaaatcgtgacacgattt 27974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 36029696 - 36029639
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| |||||||||||||||||||||||||||||||| || |   ||||||||||||    
T  36029696 ttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgatttt 36029639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 27038645 - 27038605
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  27038645 ttgtggtttggaaaaacagagaaatcgtgacacgatttcat 27038605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 48438819 - 48438763
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||| |||| |||||||||||||||||||||||||||||| |   |||||||||||    
T  48438819 ttgtggtttgtaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 48438763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 16264933 - 16264895
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttc 154  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  16264933 ttgtggtttggaagaacagcgaaatcgtgacacgatttc 16264895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 23410750 - 23410688
Alignment:
Q  268 gataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||| | ||||||||||||||| || | |||||| ||||||||||||||| ||| ||||||    
T  23410750 gataagtttggtcgtaccttgggttgttcacaccaaccgtgtcacgatttggcaaaacgtgac 23410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 37726278 - 37726244
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacga 150  Q
    ||||| |||||||||||||||||||||||||||||    
T  37726278 ttgtggtttggaagaacagagaaatcgtgacacga 37726244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 40845255 - 40845221
Alignment:
Q  119 tgttttggaagaacagagaaatcgtgacacgattt 153  Q
    |||||||| ||||||||||||||||||||||||||    
T  40845255 tgttttgggagaacagagaaatcgtgacacgattt 40845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 1306442 - 1306370
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||| | |||||||||||| | |||||| ||||| |||| ||||| || ||||||||||||    
T  1306442 aagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgactt-ggaaatcgtgac 1306370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 4599087 - 4599050
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  4599087 ttgtggtttggaagaacagggaaatcgtgacacgattt 4599050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 4601308 - 4601271
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  4601308 ttgtggtttggaagaacagggaaatcgtgacacgattt 4601271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10055825 - 10055862
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10055825 ttgtggtttggaagaacagggaaatcgtgacacgattt 10055862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10058047 - 10058084
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10058047 ttgtggtttggaagaacagggaaatcgtgacacgattt 10058084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10060269 - 10060306
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10060269 ttgtggtttggaagaacagggaaatcgtgacacgattt 10060306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10062491 - 10062528
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10062491 ttgtggtttggaagaacagggaaatcgtgacacgattt 10062528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10064713 - 10064750
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10064713 ttgtggtttggaagaacagggaaatcgtgacacgattt 10064750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10066935 - 10066972
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10066935 ttgtggtttggaagaacagggaaatcgtgacacgattt 10066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 10210998 - 10211035
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10210998 ttgtggtttggaagaacagggaaatcgtgacacgattt 10211035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 22172690 - 22172719
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  22172690 tggaagaacagagaaatcgtgacacgattt 22172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 23200567 - 23200495
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||| | |||||||||||| | | |||| ||||| |||| |||||||| ||||||||||||    
T  23200567 aagtttccaggataaggactggtcgtaccttgtgacttacgtaccaatcgtgacacgattt-ggaaatcgtgac 23200495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 27985978 - 27986015
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  27985978 ttgtggtttggaataacagagaaatcgtgacacgattt 27986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 28501180 - 28501209
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  28501180 tggaagaacagagaaatcgtgacacgattt 28501209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 28503347 - 28503376
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  28503347 tggaagaacagagaaatcgtgacacgattt 28503376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 36018401 - 36018442
Alignment:
Q  289 ggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||| | ||||||||||||||||| ||||||    
T  36018401 ggtcgtacgcaccaaccatgtcacgatttgggaaaacgtgac 36018442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 40372284 - 40372313
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  40372284 tggaagaacagagaaatcgtgacacgattt 40372313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 37408057 - 37408093
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatt 152  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  37408057 ttgtggtttggaagaacaaagaaatcgtgacacgatt 37408093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 40592265 - 40592305
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  40592265 ttgtggtttggaagaacggagaaatcgtgacatgatttcat 40592305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 40735026 - 40735066
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||| ||||||| ||||||||||||||||||||    
T  40735026 ttgtggtttggatgaacagataaatcgtgacacgatttcat 40735066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 7e-74; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 603812 - 603612
Alignment:
Q  113 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | || ||| |||||||||| |||| ||||||||||    
T  603812 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtgtgccacgatttttggtagtgtcgagagcatgttttttggatgttcaatcgt 603713  T
Q  213 gacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||    
T  603712 gacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcaccaaacgtgtcac 603613  T
Q  313 g 313  Q
    |    
T  603612 g 603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 330
Target Start/End: Complemental strand, 22964295 - 22964089
Alignment:
Q  123 ttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtgacaccatt 221  Q
    |||||| |||||||||||||||||||||||||||| |  |||||||||||| || |||| ||| ||| |||||| | ||  |||||||||||| || |||    
T  22964295 ttggaaaaacagagaaatcgtgacacgatttcataggcgtgtcacgatttt-ggtaatgtcgagagc-tgttttgcagggtgttcaatcgtgatacgatt 22964198  T
Q  222 ttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggga 321  Q
    ||||| |||||||||| |||||| |||||||||| ||||||| ||||||||||| ||||||||||||  |||||||| ||||||||||||| ||||||||    
T  22964197 ttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttggga 22964098  T
Q  322 aatcgtgac 330  Q
    || ||||||    
T  22964097 aaacgtgac 22964089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 123 - 330
Target Start/End: Original strand, 23824098 - 23824304
Alignment:
Q  123 ttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtgacaccatt 221  Q
    |||||| |||||||||||||||||||||||||||| |  |||||||||||| || |||| ||| ||| |||||| | ||  |||||||||||| || |||    
T  23824098 ttggaaaaacagagaaatcgtgacacgatttcataggcgtgtcacgatttt-ggtaatgtcgagagc-tgttttgcagggtgttcaatcgtgatacgatt 23824195  T
Q  222 ttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggga 321  Q
    ||||| |||||||||| |||||| |||||||||| ||||||| ||||||||||| ||||||||||||  |||||||| ||||||||||||| ||||||||    
T  23824196 ttgggaaaacgtgacacgatttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttggga 23824295  T
Q  322 aatcgtgac 330  Q
    || ||||||    
T  23824296 aaacgtgac 23824304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 3809406 - 3809286
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||   || |||||| ||||||||||| ||||||||||||||||||||| ||||||     
T  3809406 caatcgtgacacgattttggggaaacgtgacacgattttcggcttg---ggaaagttttcaggataaggttggtcgtaccttgggtcgtacgtaccaaat 3809310  T
Q  306 gtgtcacgatttgggaaatcgtga 329  Q
    |||||| |||||||||||||||||    
T  3809309 gtgtcatgatttgggaaatcgtga 3809286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 21593134 - 21593251
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||  |||||||||| |||||||||||||||||| || ||||| |    
T  21593134 caatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtaccaacc 21593233  T
Q  306 gtgtcacgatttgggaaa 323  Q
    ||||||||||||||||||    
T  21593234 gtgtcacgatttgggaaa 21593251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 9183492 - 9183381
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |    
T  9183492 caatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 9183393  T
Q  306 gtgtcacgattt 317  Q
    ||| ||||||||    
T  9183392 gtgacacgattt 9183381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 130 - 318
Target Start/End: Complemental strand, 33211740 - 33211555
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    |||||||||||||||||||||||||||| || ||||||||  |||||  ||||||| |||||||||||||   || ||||||| |||| |||||||  ||    
T  33211740 aacagagaaatcgtgacacgatttcataggtgtgtcacga--tttggctatgccgagagcatgttttctgagtgtccaatcgtaacacgattttggaaaa 33211643  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    ||||| ||||||||| |||||| |||||| ||||  |||||| |||   |||||| |||||||||||||||||| | ||||||||||||    
T  33211642 acgtgtcatgatttt-ggcttgttgggcacgtttttaggatatggtttatcgtactttgggtcgtacgcaccaaccatgtcacgatttg 33211555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 24714975 - 24714763
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgac 215  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||  || |||| ||| ||| ||| || ||||  || ||||||| |    
T  24714975 ttgtggtttggaaaaacagagaaatcgtgacacgatttcataagtgtgtcacgattta-ggcaatgtcgagagcttgtcttttggaactttaatcgtgcc 24714877  T
Q  216 accattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgat 315  Q
    || |||| ||  |||||||||| |||||||  ||||||||||| |||| ||||||||| | ||||||||  |||||| ||||  |||| |||||||||||    
T  24714876 acgattt-ggaaaaacgtgacacgattttcaacttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccgtgtcacgat 24714778  T
Q  316 ttgggaaatcgtgac 330  Q
     |||  |||||||||    
T  24714777 atggccaatcgtgac 24714763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 26661421 - 26661541
Alignment:
Q  210 cgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgt 309  Q
    |||||||| |||||||| ||| |||||| |||||||| |||||||| |  |||| ||||||||||| |||||||||||||||||||||||||||   |||    
T  26661421 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26661520  T
Q  310 cacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||||||    
T  26661521 cacgatttgggaaaacgtgac 26661541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 26767392 - 26767512
Alignment:
Q  210 cgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgt 309  Q
    |||||||| |||||||| ||| |||||| |||||||| |||||||| |  |||| ||||||||||| |||||||||||||||||||||||||||   |||    
T  26767392 cgtgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgt 26767491  T
Q  310 cacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||||||    
T  26767492 cacgatttgggaaaacgtgac 26767512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 24435567 - 24435678
Alignment:
Q  219 attttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    |||||||| |||||||||| |||||||  |||| | |||| |||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  24435567 attttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccgtgtcacgatttg 24435666  T
Q  319 ggaaatcgtgac 330  Q
    |  |||||||||    
T  24435667 gccaatcgtgac 24435678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 31980033 - 31979919
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||  ||||||||||  ||||||  ||||||||||| |||| ||||||||||| |||||||| ||| ||||||||||||||     
T  31980033 tcaatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgagtcgtacgcaccaat 31979934  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  31979933 cgtgtcacgatttgg 31979919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 319
Target Start/End: Original strand, 10076685 - 10076886
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    |||||||||| ||||||||| ||||||||||| |||||||| ||  ||||||||||||  | |||| ||| ||| |||||| | ||  |  ||||| |||    
T  10076685 ttgtgttttgaaagaacagaaaaatcgtgacatgatttcatcagcgtgtcacgatttt--gcaatgtcgagagc-tgttttgcagggtgcccaatcatga 10076781  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
     || |||||||| |||||||| | ||||||   |||||||   | |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10076782 tacgattttgggaaaacgtgatacgatttttaacttgctgattacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacga 10076881  T
Q  315 tttgg 319  Q
    |||||    
T  10076882 tttgg 10076886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 5571845 - 5571957
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||| | |||||||||| |||||||  ||||||||||| ||||  ||| |||||| |||||||||||||||||||||||||||     
T  5571845 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaat 5571944  T
Q  305 cgtgtcacgattt 317  Q
    |||| ||||||||    
T  5571945 cgtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 18234600 - 18234485
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||  |||||||| |||||||| | |||||||   ||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  18234600 tcaatcgtgtcaggattttgggaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 18234501  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  18234500 tcgtgtcacgatttgg 18234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 5413906 - 5413813
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  5413906 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5413813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 330
Target Start/End: Original strand, 21272482 - 21272695
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttct-ggacgttcaatcgtga 214  Q
    |||||||||||| |||||| |||||||||||||  ||||||| |  |||||||||||  || ||| || | ||| ||||||   ||  || |||||||||    
T  21272482 ttgtgttttggaggaacagggaaatcgtgacacattttcataggcgtgtcacgattt--ggcaataccaatagcttgttttgaagggtgtccaatcgtga 21272579  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    ||| |||||||| || |||| || |||||| | | || | |||| |||| ||||||||||| |||| |||||||| ||||||||||||| ||||||| ||    
T  21272580 cacgattttgggtaatcgtgtcacgatttttgacatgtttggcacgttttcaggataaggttggtcataccttggatcgtacgcaccaaccgtgtcaaga 21272679  T
Q  315 tttgggaaatcgtgac 330  Q
    |||||  |||||||||    
T  21272680 tttggccaatcgtgac 21272695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 5411716 - 5411598
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||  || |||||||   |||| ||||||||||||||| ||| || |||||||| ||||||||||||||||||||||| |||     
T  5411716 caatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaat 5411617  T
Q  305 cgtgtcacgatttgggaaa 323  Q
    |||| ||||||| ||||||    
T  5411616 cgtggcacgattggggaaa 5411598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 5406656 - 5406563
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  5406656 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5406563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 5410981 - 5410888
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  5410981 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5410888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 16452898 - 16452805
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  16452898 cgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 16452805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 30834995 - 30834902
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  30834995 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 30834902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 31086052 - 31086168
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||||  |||||||||| |||||||   |||||| || | ||||  ||||||||||| ||||||||||||||||||||||||||    
T  31086052 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcacca 31086151  T
Q  303 aacgtgtcacgatttgg 319  Q
    | |||||||||||||||    
T  31086152 atcgtgtcacgatttgg 31086168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 5017075 - 5017190
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggca-agtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||| | |||||||||| |||||||   ||| ||||| | | ||| ||||||||||| ||||||||||||||||||||||||||    
T  5017075 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttactgggtacatttttcaggataaggttggtcgtaccttgggtcgtacgcacca 5017174  T
Q  303 aacgtgtcacgatttg 318  Q
    | ||||||||||||||    
T  5017175 atcgtgtcacgatttg 5017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 5407391 - 5407280
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||  || |||||||   |||| ||||||||||||||| ||| || |||||||| ||||||||||||||||||||||| |||     
T  5407391 caatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaat 5407292  T
Q  305 cgtgtcacgatt 316  Q
    |||| |||||||    
T  5407291 cgtgacacgatt 5407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 33160812 - 33160726
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||| ||| |||| |||||||    
T  33160812 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 33160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 17759427 - 17759492
Alignment:
Q  210 cgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggt 275  Q
    |||||||| |||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||    
T  17759427 cgtgacacgattttggggaaacgtgacacaattttcggcttgctggacaagttttcaggataaggt 17759492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 26954763 - 26954674
Alignment:
Q  228 aaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||| || |||||| ||| |||| | ||  ||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  26954763 aaacgtgtcacgatttttggcatgcttgacacattttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattt 26954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 31405132 - 31405039
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagt-ttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| | |||| ||||||||||| |||  || ||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||| ||||||    
T  31405132 cgtgacacgttttttggcttgctgggaaagactttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaa 31405039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 16452752 - 16452694
Alignment:
Q  265 caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||||||| ||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  16452752 caggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaa 16452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 23896805 - 23896736
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||  |||||| ||||||||||| ||||||||||| ||||||||| | ||| |||| ||||||||    
T  23896805 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5016989 - 5017029
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  5016989 ttgtggtttggaagaacagaaaaatcgtgacacgatttcat 5017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5571769 - 5571809
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  5571769 ttgtgttttgggagaatagagaaatcgtgacacgatttcat 5571809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 31085966 - 31086006
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  31085966 ttgtggtttagaagaacagagaaatcgtgacacgatttcat 31086006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 5757103 - 5757174
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||  |||||| ||||||||||| ||||||||||| ||||||| | | ||| |||| ||||||||||    
T  5757103 cttgctggttaagttttcaggataaggttggtcgtacctttggtcgtatgtatcaatcgtggcacgatttgg 5757174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Original strand, 14737113 - 14737144
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttca 155  Q
    ||||||||||||||||||||||||||||||||    
T  14737113 tggaagaacagagaaatcgtgacacgatttca 14737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 154
Target Start/End: Complemental strand, 5266625 - 5266595
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttc 154  Q
    |||||||||||||||||||||||||||||||    
T  5266625 tggaagaacagagaaatcgtgacacgatttc 5266595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 6136527 - 6136490
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  6136527 ttgtggtttggaagaacagggaaatcgtgacacgattt 6136490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 11857539 - 11857510
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  11857539 tggaagaacagagaaatcgtgacacgattt 11857510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 14741954 - 14741983
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  14741954 tggaagaacagagaaatcgtgacacgattt 14741983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 22010217 - 22010246
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  22010217 tggaagaacagagaaatcgtgacacgattt 22010246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 30125046 - 30125075
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  30125046 tggaagaacagagaaatcgtgacacgattt 30125075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 34166686 - 34166723
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  34166686 ttgtggtttggaagaacagggaaatcgtgacacgattt 34166723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 6097845 - 6097785
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||| ||||||| | |||||||||| ||| |||||||||||| |||| ||||||||    
T  6097845 aagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattt 6097785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 18234687 - 18234647
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  18234687 ttgtggtttggaagaacagagaaatgttgacacgatttcat 18234647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 116 - 330
Target Start/End: Original strand, 10938 - 11150
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||  | |||||||  |||||||||| | ||  || |||||||||    
T  10938 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt--gcaatgccgtgagcatgttttgcagggtgtccaatcgtga 11034  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    ||| |||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  11035 cacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacga 11134  T
Q  315 tttgggaaatcgtgac 330  Q
    ||||||||||||||||    
T  11135 tttgggaaatcgtgac 11150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 42435779 - 42435567
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||||||| ||| ||||||||||||||||||| |||||||| |  ||||||||||||  | |||||||  |||||||||| | ||  || |||||||||    
T  42435779 ttgtgttttagaa-aacagagaaatcgtgacacaatttcataggcgtgtcacgatttt--gcaatgccgtgagcatgttttgcagggtgtccaatcgtga 42435683  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    ||| ||||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42435682 cacgattttggggaaacgtgacacgattttcgtcttgcttggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 42435583  T
Q  315 tttgggaaatcgtgac 330  Q
    ||||||||||||||||    
T  42435582 tttgggaaatcgtgac 42435567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 113 - 330
Target Start/End: Original strand, 4282942 - 4283138
Alignment:
Q  113 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 212  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  4282942 caattgttttttggaagaatagagaaatcatgacacgatttcataagtgtgtcacgatttttggtagtgccgagagcatgttttctggatgttcaatcgt 4283041  T
Q  213 gacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
                         |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| |     
T  4283042 ---------------------gacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgttag 4283120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 15212472 - 15212589
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15212472 caatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 15212571  T
Q  306 gtgtcacgatttgggaaa 323  Q
    |||||||||||| |||||    
T  15212572 gtgtcacgatttaggaaa 15212589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 27810909 - 27811095
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    |||||||||||||||||||||||||||| |  |||| ||||||| || |||| ||| |||   ||| | ||  || |||||||||||| |||||| | ||    
T  27810909 aacagagaaatcgtgacacgatttcataggcgtgtcgcgatttt-ggtaatgtcgagagctattttgcagggtgtccaatcgtgacacgattttgagaaa 27811007  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    | |||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  27811008 atgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtatcttgggttgtacgcaccaaacgtgtcacgattt 27811095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 43036109 - 43036233
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||  |||||||||| |||||||| |||| ||||||||||| ||||||||||| | ||||||||||| |||||||||||||||    
T  43036109 caatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggcaagttttcaggataaggttgatcgtaccttggatcgtacgcaccaaac 43036208  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||| ||||||    
T  43036209 gtgtcacgatttgggaaaacgtgac 43036233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 30143028 - 30143152
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||||||| |||||||  |||||||||| |||||||| |||||||||||||||||| |    
T  30143028 caatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttaaggataaggttggtcgtactttgggtcgtacgcaccaacc 30143127  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||| ||||||    
T  30143128 gtgtcacgatttggcaaaacgtgac 30143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 12703121 - 12703004
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| ||||||| |||||||  ||||| || ||||||||||| |||||||| ||||||||||||||||| ||    
T  12703121 caatcgtgacacgattttgggaaaacgtgacacgattttcagcttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgcaccatac 12703022  T
Q  306 gtgtcacgatttgggaaa 323  Q
    ||||||||||||||||||    
T  12703021 gtgtcacgatttgggaaa 12703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 22976002 - 22976123
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| ||||||| ||||||| | ||||||| |||||||||||  ||||||| |||||||| |||||||||||    
T  22976002 caatcgtgacacgattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtacattgggtcgcacgcaccaaac 22976101  T
Q  306 gtgtcacgatttgggaaatcgt 327  Q
    ||||||||||| ||||||||||    
T  22976102 gtgtcacgattcgggaaatcgt 22976123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 191 - 323
Target Start/End: Complemental strand, 1746716 - 1746583
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||| |||||||| || ||||||| |||||| ||||||||||||||| ||| ||||||||||| |||||||||||||    
T  1746716 tgttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 1746617  T
Q  290 gtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
     ||||||||| ||| |||| ||||||| ||||||    
T  1746616 atcgtacgcatcaatcgtggcacgattggggaaa 1746583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 4731344 - 4731468
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||| || |||| ||| ||||| | |||||||||||||| |||| |||||||      
T  4731344 caatcgtgacacgattttgggaaaacatgacatgattttcggcttgctggacacgttttcagaataagattggtcgtaccttgggccgtaggcaccaact 4731443  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||| ||||||    
T  4731444 gtgtcacgatttggcaaaacgtgac 4731468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 11383474 - 11383585
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||| ||||||| |||||||| |||||||||| ||||||| ||||||||||||| ||| || |||||||| |||||||| |||||||||||||| ||| |    
T  11383474 caattgtgacacgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcatcaacc 11383573  T
Q  306 gtgtcacgattt 317  Q
    ||||||||||||    
T  11383574 gtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 40221232 - 40221343
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||| ||| |||||||| |||||||||| ||||||| ||||| ||| || |||| |||||||||||  ||||| ||||||||||||||||||||||    
T  40221232 caatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcaccaaac 40221331  T
Q  306 gtgtcacgattt 317  Q
    ||||||||||||    
T  40221332 gtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 4733508 - 4733622
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||| ||   || |||| |||||||  ||  |||||||||||||||||||||||||    
T  4733508 gttcaatcgtgacacgattttgggaaaacgtgacacgattttcggctttctaaacacgttttcaggatacagtttgtcgtaccttgggtcgtacgcacca 4733607  T
Q  303 aacgtgtcacgattt 317  Q
    | |||||||||||||    
T  4733608 accgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 4743676 - 4743562
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||| |||||||||||| |||||||| |||||| |||| ||||  ||||||||||| ||||||||| ||||||||||||| |||     
T  4743676 caatcgtgacacgattttgaggaaacgtgacacgattttcgacttgcttggcacgtttttcaggataaggttggtcgtaccgtgggtcgtacgcatcaac 4743577  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||| ||||||    
T  4743576 cgtgtcacaatttgg 4743562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 34254810 - 34254693
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||| |||||| |||||||| || ||||||| |||||| || |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||| |    
T  34254810 aatcatgacacgattttgggaaatcgtgacacgatttttggattgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 34254711  T
Q  306 gtgtcacgatttgggaaa 323  Q
    ||| ||||||| ||||||    
T  34254710 gtggcacgattggggaaa 34254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 323
Target Start/End: Complemental strand, 34257002 - 34256869
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||| |||||||| || ||||||| |||||| ||||||||| ||||| ||| ||||||||| | ||| |||||||||    
T  34257002 tgttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgagcaagattttcaggataagattggttgtaccttgg 34256903  T
Q  290 gtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||||| ||| |||| ||||||| ||||||    
T  34256902 gtcgtacgcatcaatcgtggcacgattggggaaa 34256869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 10014845 - 10014957
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| || | ||||| |||||| ||| |||| |||| |||| ||||||||||| ||||||||||||||||||| ||| ||| |    
T  10014845 caatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatc 10014944  T
Q  306 gtgtcacgatttg 318  Q
    |||||||||||||    
T  10014945 gtgtcacgatttg 10014957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 19175313 - 19175428
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| ||||||||||||||||||   ||||||||| | |||| ||||||||||| |||  |||||||||||||| |||||||    
T  19175313 tcaatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaa 19175412  T
Q  304 acgtgtcacgatttgg 319  Q
     |||| ||||||||||    
T  19175413 tcgtgccacgatttgg 19175428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 4696252 - 4696321
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||| |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4696252 cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 4696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 33351895 - 33351960
Alignment:
Q  265 caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  33351895 caggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgac 33351960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 5702060 - 5702184
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||  |||||||||| |||||||   ||||||||| |  ||| ||||||||||| ||||||||||||| | |||||||||||    
T  5702060 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacattttcaggataaggttggtcgtaccttggattgtacgcaccaa 5702159  T
Q  304 acgtgtcacgatttgggaaatcgtg 328  Q
     ||||||||||||||| ||| ||||    
T  5702160 tcgtgtcacgatttggcaaaacgtg 5702184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 317
Target Start/End: Original strand, 42497885 - 42498012
Alignment:
Q  191 tgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgg 289  Q
    ||||||| || ||| |||||||||||| |||||||| ||  |||||| |||| | ||||||||||||||| ||| |||||||||||  ||||||||||||    
T  42497885 tgttttcagggcgtccaatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggcaagattttcaggataaggttagtcgtaccttgg 42497984  T
Q  290 gtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||| |||||| ||| |||| || |||||    
T  42497985 gtcctacgcatcaatcgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 19945836 - 19945710
Alignment:
Q  192 gttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttggg 290  Q
    |||||| || ||| |||||||||||| ||||| || || ||||||| |||||| |||||| |||| ||| ||| ||||||||||| | |||||||||||     
T  19945836 gttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttggggaagattttcaggataaggttgatcgtaccttgga 19945737  T
Q  291 tcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||| ||| |||| ||||||||    
T  19945736 tcgtacgcatcaatcgtggcacgattt 19945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 316
Target Start/End: Original strand, 31217907 - 31218053
Alignment:
Q  171 ttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccagga 269  Q
    |||||| |||| ||| |||  |||||| || ||| |||| ||||||| |||||||| || ||||||| |||||| |||||| |||||||| |||  ||||    
T  31217907 ttttggtaatgtcgagagctggttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagatttttagga 31218006  T
Q  270 taaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||||| ||||||||||||| || |||||| ||| |||| |||||||    
T  31218007 taaggttggtcgtaccttggatcatacgcatcaatcgtgacacgatt 31218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 17982363 - 17982456
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  17982363 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 17982456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 44303564 - 44303657
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||| ||||||||||||| || |||||| |||  ||| ||||||| ||||||    
T  44303564 cgtgacacgatttttggcttgctgggcaagatttccaggataaggttggtcgtaccttggatcatacgcatcaattgtggcacgattggggaaa 44303657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5701972 - 5702012
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  5701972 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 5702012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 319
Target Start/End: Original strand, 23799221 - 23799271
Alignment:
Q  269 ataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||||||||||    
T  23799221 ataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttgg 23799271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 1345855 - 1345744
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgt--accttgggtcgtacgcac 300  Q
    ||||||||||||||| |||| | | ||| ||||||  |||||| ||||||| | || |||| ||||||||||| ||||||  |||||||||||||||||     
T  1345855 gttcaatcgtgacacgattt-gagaaaatgtgacacaattttcagcttgcttgacacgttttcaggataaggttggtcgtacaccttgggtcgtacgcat 1345757  T
Q  301 caaacgtgtcacg 313  Q
    ||| | |||||||    
T  1345756 caaccatgtcacg 1345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 4456612 - 4456555
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| |||||||||||| |||||||||||||||||||||| |   ||||||||||||    
T  4456612 ttgtggtttggaagaacaaagaaatcgtgacacgatttcatcaacgtgtcacgatttt 4456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 7412931 - 7412894
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7412931 ttgtggtttggaagaacagagaaatcgtgacacgattt 7412894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 19948779 - 19948686
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| |||||||||| |||| |||  | |||||| | ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  19948779 cgtgacacgatttttggcttgctggacaagatttttatgataagtttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 19948686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 3439108 - 3439144
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatt 152  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3439108 ttgtggtttggaagaacagagaaatcgtgacacgatt 3439144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Original strand, 10688646 - 10688677
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttca 155  Q
    ||||||||||||||||||||||||||||||||    
T  10688646 tggaagaacagagaaatcgtgacacgatttca 10688677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 154
Target Start/End: Original strand, 25689589 - 25689619
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttc 154  Q
    |||||||||||||||||||||||||||||||    
T  25689589 tggaagaacagagaaatcgtgacacgatttc 25689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 4759562 - 4759591
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  4759562 tggaagaacagagaaatcgtgacacgattt 4759591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 10683767 - 10683796
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  10683767 tggaagaacagagaaatcgtgacacgattt 10683796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 15290163 - 15290200
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  15290163 ttgtggtttggaagaacagggaaatcgtgacacgattt 15290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 15470532 - 15470569
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  15470532 ttgtggtttggaagaacagggaaatcgtgacacgattt 15470569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 18870049 - 18870078
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  18870049 tggaagaacagagaaatcgtgacacgattt 18870078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 25327692 - 25327721
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  25327692 tggaagaacagagaaatcgtgacacgattt 25327721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 30656254 - 30656225
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  30656254 tggaagaacagagaaatcgtgacacgattt 30656225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 31043049 - 31043121
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||| | |||||||||||| | |||||| ||||| |||| ||||| || ||||||||||||    
T  31043049 aagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgactt-ggaaatcgtgac 31043121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 33037315 - 33037344
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  33037315 tggaagaacagagaaatcgtgacacgattt 33037344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 36979986 - 36979957
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  36979986 tggaagaacagagaaatcgtgacacgattt 36979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 39784353 - 39784382
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  39784353 tggaagaacagagaaatcgtgacacgattt 39784382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 42575889 - 42575852
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  42575889 ttgtggtttggaagaacagggaaatcgtgacacgattt 42575852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 23799112 - 23799152
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||| ||||||||||||||||| ||||||||||||    
T  23799112 ttgtggtttgaaagaacagagaaatcgtaacacgatttcat 23799152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 116 - 330
Target Start/End: Original strand, 6655336 - 6655548
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||  | |||||||  |||||||||| | ||  || |||||||||    
T  6655336 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt--gcaatgccgtgagcatgttttgcagggtgtccaatcgtga 6655432  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    ||| |||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  6655433 cacgattttggggaaatgtgacacgattttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacga 6655532  T
Q  315 tttgggaaatcgtgac 330  Q
    ||||||||||||||||    
T  6655533 tttgggaaatcgtgac 6655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 26363733 - 26363857
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  26363733 caatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacgcaccaaac 26363832  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| |||||||||||||||||    
T  26363833 gtgtcacaatttgggaaatcgtgac 26363857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 9927946 - 9927819
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||||||| ||| |||||| ||||||||||||||||| ||||||| ||||||||||| |||||| |||||||||||||||||||    
T  9927946 gttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgttccttgggtcgtacgcacca 9927847  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||||| ||||||    
T  9927846 aacgtgtcacgatttgggaaaacgtgac 9927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 34570894 - 34570772
Alignment:
Q  208 atcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgt 307  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  34570894 atcgtgacacgattttgggaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgt 34570795  T
Q  308 gtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||| ||||||    
T  34570794 gtcacgatttgggaaaacgtgac 34570772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 37740312 - 37740436
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||     
T  37740312 caatcgtaacacgattttgggaaaacgtgacatgattttcggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaat 37740411  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||| ||||||    
T  37740412 gtgtcacgatttgggaaaacgtgac 37740436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 50674546 - 50674422
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||  || |||||||| |||||||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||    
T  50674546 caatcgtgttacgattttgggaaaacgtgacatgattttcagcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaac 50674447  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||| ||||    
T  50674446 gtgtcacgatttgggaaatcatgac 50674422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 12745899 - 12745787
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagttt-ccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||     
T  12745899 caatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgtacgcgccaat 12745800  T
Q  305 cgtgtcacgattt 317  Q
    |||||||||||||    
T  12745799 cgtgtcacgattt 12745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 27417654 - 27417527
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||||||| |||||||||| |||||||  |||| | |||| | || ||||||||||| ||||||||||||||||||||||| ||    
T  27417654 gttcaatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtaccttgggtcgtacgcatca 27417555  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    | ||||||||||||||||||||||||||    
T  27417554 accgtgtcacgatttgggaaatcgtgac 27417527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 36314811 - 36314925
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| |||||||||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||     
T  36314811 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 36314910  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  36314911 cgtgtcacgatttgg 36314925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 36329020 - 36329134
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| |||||||||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||     
T  36329020 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 36329119  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  36329120 cgtgtcacgatttgg 36329134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 40630452 - 40630576
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||| ||| |||||||| |||||||||| ||||||| ||||||| ||||  ||| ||| ||||||| |||||||||||||||| || |||||||||    
T  40630452 caatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttggtcgtaccttgggtcatatgcaccaaac 40630551  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||||||    
T  40630552 gtgtcacgatttgggaaatcgtgac 40630576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 46570226 - 46570115
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||  |||||||| ||||||||||  |||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||| |||||    
T  46570226 caatcgtgacaagattttgggaaaacgtgacacaattttcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaac 46570127  T
Q  306 gtgtcacgattt 317  Q
    ||||||||||||    
T  46570126 gtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 54867782 - 54867581
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatg--ttttctggacgttcaatcgtg 213  Q
    ||||| |||||||||| |||||| ||||||||||||||||| |   |||||||||||| ||    || |  ||||||  ||||| ||| | |||||||||    
T  54867782 ttgtggtttggaagaatagagaagtcgtgacacgatttcatcaacgtgtcacgattttcgg----gcagcgagcatggtttttcaggatgctcaatcgtg 54867687  T
Q  214 acaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacg 313  Q
     ||| |||||||| |||||||||| |||||||  ||||||||||| ||||   ||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  54867686 tcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatcgtgtcacg 54867587  T
Q  314 atttgg 319  Q
    ||||||    
T  54867586 atttgg 54867581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 323
Target Start/End: Original strand, 41639030 - 41639150
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||||||||| |||||||  |||||||||| |||||||  |||| |||||| |||| ||||||||||| ||||||||||||||||||||||| ||    
T  41639030 gttcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatca 41639129  T
Q  303 aacgtgtcacgatttgggaaa 323  Q
    |  ||||||||||||||||||    
T  41639130 actgtgtcacgatttgggaaa 41639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 54200363 - 54200271
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  54200363 cgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaa 54200271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 319
Target Start/End: Original strand, 25861527 - 25861728
Alignment:
Q  117 tgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatg--ttttctggacgttcaatcgtga 214  Q
    |||||||||| ||||||||||||||||||||||||||||| |   |||||||||||   |    || |  ||||||  ||||| ||  | |||||||||     
T  25861527 tgtgttttgggagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttccag----gcagtgagcatggcttttcagggtgctcaatcgtgt 25861622  T
Q  215 caccattttggggaaa-cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacg 313  Q
    ||| |||||||| ||| ||||||| |||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  25861623 cacgattttgggaaaaacgtgacacgattttcaacttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgtcacg 25861722  T
Q  314 atttgg 319  Q
    ||||||    
T  25861723 atttgg 25861728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 5429367 - 5429483
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||||||| |||||||| |||||||| | ||||||| ||||| ||| ||||||| |||| |||| | ||||||||||||||||||||||||||| ||    
T  5429367 aatcgtgacacgattttgggaaaacgtgatacgattttcagcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtacgcaccaatcg 5429466  T
Q  307 tgtcacgatttgggaaa 323  Q
    ||||||||| |||||||    
T  5429467 tgtcacgatgtgggaaa 5429483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 323
Target Start/End: Original strand, 6742915 - 6743114
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccatt 221  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||  | || | ||| |||   ||||| ||  |   ||||||| |||  ||    
T  6742915 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt--gcaacgtcgagagctgtttttcagggtgcctaatcgtggcacgttt 6743012  T
Q  222 ttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggga 321  Q
    ||||| |||||||||| ||||||   |||| |||||| |||| ||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||    
T  6743013 ttgggaaaacgtgacacgattttaaacttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcgtgtcacgatttggga 6743112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 50263383 - 50263274
Alignment:
Q  220 ttttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||| |||||| ||| ||||||||||||| |||| |||||| ||| ||||||| ||||||||||| |||||||||||||||| |||||||| |||||    
T  50263383 ttttgggaaaacgtaacacgattttcggcttggtgggtaagttttcagaataaggttggtcgtacctt-ggtcgtacgcaccaaatgtgtcacggtttgg 50263285  T
Q  320 gaaatcgtgac 330  Q
    |||||||||||    
T  50263284 gaaatcgtgac 50263274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 52095843 - 52095733
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||| |||     
T  52095843 caatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtaagcatcaat 52095744  T
Q  305 cgtgtcacgat 315  Q
    |||| ||||||    
T  52095743 cgtgacacgat 52095733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 8689079 - 8689192
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| |||||||| |||||||||| |||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| |    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 8689178  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  8689179 gtgccacgatttgg 8689192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 54882508 - 54882605
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||| ||| || |||| ||||||||||| | |||||||||||||||||||||||||    
T  54882508 caatcgtgacacgattttgggaaaacgtgacacgattttcggcttgttggacacgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaa 54882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 5268780 - 5268895
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  5268780 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 5268879  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  5268880 tcgtgtcacgatttgg 5268895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 29254205 - 29254304
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||||| ||||||||| | ||| ||||||| |||||||  |||| ||||||||||||||||||||||||||||| ||| ||||||    
T  29254205 cgtgacatgattttcggcttgttgggcaagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgac 29254304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 56179141 - 56179028
Alignment:
Q  171 ttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccagga 269  Q
    |||||| |||| ||||||| ||||||| || ||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| |||||    
T  56179141 ttttggtaatgtcgaaagc-tgttttcagggcgtccaatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgggcaagattttcagga 56179043  T
Q  270 taaggtcggtcgtac 284  Q
    |||||| ||||||||    
T  56179042 taaggttggtcgtac 56179028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 36994227 - 36994359
Alignment:
Q  187 agcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtacct 286  Q
    |||||||||||||   || |||||||||||| ||||| || ||||||| ||  |||||||||||||| |||| |||| |  |||||||| | ||||||||    
T  36994227 agcatgttttctgagtgtccaatcgtgacacaatttttggaaaacgtgtcacaattttcggcttgctaggcacgttttctagataaggttgatcgtacct 36994326  T
Q  287 tgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    | ||||||||||||||| |||||||||||||||    
T  36994327 taggtcgtacgcaccaaccgtgtcacgatttgg 36994359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 2209188 - 2209300
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||            | |||||||||||||||||    
T  2209188 caatcgtgacacgattttggggaaacgtgacacgattttcggtttgctaggcaagttttcaggataagg------------ttggtcgtacgcaccaaac 2209275  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    | |||||||||||||||||||||||    
T  2209276 gcgtcacgatttgggaaatcgtgac 2209300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 284
Target Start/End: Original strand, 35661826 - 35661985
Alignment:
Q  123 ttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattt 222  Q
    ||||||||||| |||| |||||||||||||| |||||  ||||| |||||| | |  ||  | ||||||||||||||   || |||||||||||| ||||    
T  35661826 ttggaagaacaaagaagtcgtgacacgatttaataagcgtgtcatgattttagca--tgttgtaagcatgttttctgagtgtccaatcgtgacacgattt 35661923  T
Q  223 tggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||| ||| ||| || ||||||||||||| |||||| |||| ||||||||||| ||||||||    
T  35661924 tgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggttggtcgtac 35661985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 26176102 - 26176028
Alignment:
Q  210 cgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||| |||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  26176102 cgtgacacaattttgggaaaacgtgacacgattttcggcttgatgggcaagttttcaggataaggttggtcgtac 26176028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 319
Target Start/End: Original strand, 16628366 - 16628568
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||  |    || |  |||||| ||| | ||  | |||||||||     
T  16628366 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaatgtgtcacgattttcag----gcagtgagcatgctttgcagggtgctcaatcgtgt 16628461  T
Q  215 caccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
    ||| |||||||| |||||||||| |||||||   |||||| |  |  |||  || |||||||| ||||||||||||||||||||||||||| ||||||||    
T  16628462 cacgattttgggaaaacgtgacacgattttcaaacttgcttgttacttttttcatgataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcac 16628561  T
Q  313 gatttgg 319  Q
    |||||||    
T  16628562 gatttgg 16628568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 16622873 - 16622989
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||| ||| ||| |||||||| |||||||||| |||||||   |||||| || | ||||  ||||||||||| ||||||||||||||||||||||||||    
T  16622873 tcaattgtgtcacaattttgggaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgggtcgtacgcacca 16622972  T
Q  303 aacgtgtcacgatttgg 319  Q
    | |||||||||||||||    
T  16622973 atcgtgtcacgatttgg 16622989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 5148138 - 5148080
Alignment:
Q  260 gtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5148138 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttg 5148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 5396271 - 5396384
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||  |||||||||| |||||||   |||| |||| | |||| ||||||||||| | |||||||||||||||||||||||||    
T  5396271 tcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgttgggtatgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaa 5396370  T
Q  304 acgtgtcacgattt 317  Q
     |||| ||||||||    
T  5396371 tcgtgccacgattt 5396384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 52083115 - 52083022
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| |||||| |||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||| |||| ||||||||||||||    
T  52083115 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaa 52083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 52094122 - 52094029
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| |||||| |||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||| |||| ||||||||||||||    
T  52094122 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaa 52094029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 3778152 - 3777950
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcat-gttttctggacgttcaatcgtga 214  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |   ||||||||||||     | || |  ||||| |||| | ||  | |||||||||     
T  3778152 ttgtggtttggaagaacagagaaatcgtgacacgattacatcaacgtgtcacgatttt---ccaagcagcgagcatggtttgcagggtgctcaatcgtgt 3778056  T
Q  215 caccattttggggaaacgtgacatgattttc-ggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacg 313  Q
    ||| |||||||| |||||||||| |||||||    ||||| || | |||| || |||||||| ||||||||||||||||||||||||||| |||| ||||    
T  3778055 cacgattttgggaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacg 3777956  T
Q  314 atttgg 319  Q
     |||||    
T  3777955 ttttgg 3777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 5370571 - 5370479
Alignment:
Q  193 ttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtac 284  Q
    ||||| || ||| |||||||||||| |||||||| || ||||||| |||||| |||||||||||||||  || ||||||||||| ||||||||    
T  5370571 ttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggcaagactttcaggataaggttggtcgtac 5370479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 5143776 - 5143662
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||| ||| |||||| | ||| |||||| |||||||   |||| |||| | |||| ||||||||||| ||||| ||||||||| || ||||||||     
T  5143776 caatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgcaccttgggttgtgcgcaccaat 5143677  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  5143676 cgtgtcacgatttgg 5143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 16622787 - 16622844
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  16622787 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 16622844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 38151931 - 38151971
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  38151931 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 38151971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 3909784 - 3909906
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||||||| ||||| || |||| |||||  ||||| ||| || | |||| ||||  || ||||||| |||||||||||| |||||||||| ||| ||    
T  3909784 aatcgtgacacgatttttggaaaacatgacactatttttggcatgtttggcacgttttaag-ataaggttggtcgtaccttgagtcgtacgcatcaaccg 3909882  T
Q  307 tgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||  |||| ||||||    
T  3909883 tgtcacgattttagaaaacgtgac 3909906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 5143846 - 5143809
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5143846 ttgtggtttggaagaacagagaaatcgtgacacgattt 5143809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 8689057 - 8689094
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8689057 ttgtggtttggaagaacagagaaatcgtgacacgattt 8689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 9194197 - 9194161
Alignment:
Q  120 gttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9194197 gttttggaagaacagagaaattgtgacacgatttcat 9194161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 10047969 - 10047929
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  10047969 ttgtggtttggaagaacagataaatcgtgacacgatttcat 10047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 12740014 - 12739942
Alignment:
Q  213 gacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtac 284  Q
    ||||| |||||||| |||||| |||  ||||| ||||||||||||||| ||| ||||||||||| ||||||||    
T  12740014 gacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgtac 12739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 12748220 - 12748148
Alignment:
Q  213 gacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtac 284  Q
    ||||| |||||||| |||||| |||  ||||| ||||||||||||||| ||| ||||||||||| ||||||||    
T  12748220 gacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtcgtac 12748148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 154
Target Start/End: Complemental strand, 29761211 - 29761181
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttc 154  Q
    |||||||||||||||||||||||||||||||    
T  29761211 tggaagaacagagaaatcgtgacacgatttc 29761181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 30000931 - 30000873
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttg 288  Q
    ||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||    
T  30000931 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttg 30000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 3814577 - 3814548
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  3814577 tggaagaacagagaaatcgtgacacgattt 3814548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 5148281 - 5148244
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  5148281 ttgtggtttggaagaatagagaaatcgtgacacgattt 5148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 5268712 - 5268749
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  5268712 ttgtggtttggaagaacagagaaatcgtgacaggattt 5268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 9223927 - 9223956
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  9223927 tggaagaacagagaaatcgtgacacgattt 9223956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 9228714 - 9228743
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  9228714 tggaagaacagagaaatcgtgacacgattt 9228743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 18856281 - 18856252
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  18856281 tggaagaacagagaaatcgtgacacgattt 18856252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 18860493 - 18860464
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  18860493 tggaagaacagagaaatcgtgacacgattt 18860464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 24742549 - 24742520
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  24742549 tggaagaacagagaaatcgtgacacgattt 24742520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 31985258 - 31985338
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtg 328  Q
    ||||||||  |||||| |||||||||| | |||||||||||| | |||||||| ||| |||| |||||||| ||||||||||    
T  31985258 cttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgattt-ggaaatcgtg 31985338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 36314724 - 36314781
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |   ||||||||||||    
T  36314724 ttgtggtttcgaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 36314781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 36328933 - 36328990
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |   ||||||||||||    
T  36328933 ttgtggtttcgaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 36328990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 51521022 - 51520993
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  51521022 tggaagaacagagaaatcgtgacacgattt 51520993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 56141539 - 56141568
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  56141539 tggaagaacagagaaatcgtgacacgattt 56141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 35661978 - 35662018
Alignment:
Q  289 ggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtga 329  Q
    ||||||||||||||| ||||||||||||||| ||| |||||    
T  35661978 ggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtga 35662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 54200439 - 54200399
Alignment:
Q  133 agagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||||||||||||||||||||||| |  ||||||||||||    
T  54200439 agagaaatcgtgacacgatttcataggcgtgtcacgatttt 54200399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 130 - 328
Target Start/End: Original strand, 44454771 - 44454967
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    |||| |||||||||||||||||||||||||  |||||||||||  ||  ||||||| |||||||||||||   || |||||||||||| |||||||||||    
T  44454771 aacaaagaaatcgtgacacgatttcataagcgtgtcacgattt--ggctatgccgagagcatgttttctgagtgtccaatcgtgacacgattttggggaa 44454868  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtg 328  Q
    |||||||| ||||||||||||||||||||||||| || |||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  44454869 acgtgacacgattttcggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtg 44454967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 37033857 - 37033645
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtga 214  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||  | |||| ||  |||||||||| | ||  || |||||||||    
T  37033857 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt--gcaatgtcgtgagcatgttttgcagggtgtccaatcgtga 37033761  T
Q  215 caccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    ||| ||||| ||||||| ||||| |||||||| ||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  37033760 cacgattttcgggaaacatgacacgattttcgccttgcagggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacga 37033661  T
Q  315 tttgggaaatcgtgac 330  Q
    ||||||||||||||||    
T  37033660 tttgggaaatcgtgac 37033645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 31658850 - 31659037
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtgacaccattttgggga 228  Q
    |||||||||||||||||||||||||||| |  ||||||||||||  | |||| ||| ||| |||||| | ||  |  |||||||||||| |||||||| |    
T  31658850 aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt--gcaatgtcgagagc-tgttttgcagggtgcccaatcgtgacacgattttgggaa 31658946  T
Q  229 aacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||||||  |||||  |||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  31658947 aacgtgacacaattttttgcttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 31659037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 11348188 - 11348298
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||    
T  11348188 aatcgtgacacgattttggagaaacgtgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacg 11348287  T
Q  307 tgtcacgattt 317  Q
    |||||||||||    
T  11348288 tgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 193080 - 193204
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||| |||||| |||||||  |||||||| |  ||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||    
T  193080 caatcatgacacaattttggaaaaacgtgataccattttcggcttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacgcaccaaac 193179  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||| |||||||||||||||||||    
T  193180 gtgtcgcgatttgggaaatcgtgac 193204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 29135762 - 29135847
Alignment:
Q  232 gtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29135762 gtgacatgattttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 330
Target Start/End: Complemental strand, 37070371 - 37070158
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgt--tcaatcgtg 213  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||  |    || |  |||||| |||||  | ||  |||||||||    
T  37070371 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttcag----gcagggagcatggtttctcaaggtgctcaatcgtg 37070276  T
Q  214 acaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
     ||| |||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| ||||||||||||||||||||||||||| |||| |||    
T  37070275 tcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccac 37070176  T
Q  313 gatttgggaaatcgtgac 330  Q
    ||||||| ||||||||||    
T  37070175 gatttggaaaatcgtgac 37070158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 323
Target Start/End: Original strand, 3206599 - 3206790
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    ||||||||||||||||| ||||   |||  |||||||||||| || |||| ||| ||  ||||||| || ||| |||||||||||| |||||||| ||||    
T  3206599 cagagaaatcgtgacacaatttggcaagcgtgtcacgatttt-ggtaatgtcgagagt-tgttttcagggcgtccaatcgtgacacaattttgggaaaac 3206696  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcg-taccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||| |||||||| ||||||||||||| |||  |||||||||| ||||| |||||||||||||||||| ||| |||| ||| ||||||||||    
T  3206697 gtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgggaaa 3206790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 28220709 - 28220584
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggctt-gctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||| |||||||||| |||||||||||| ||  | ||||| |  | |||||||| |||||||||||||||||||||||| |||    
T  28220709 caatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttgggtcgtacgcacaaaa 28220610  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||| ||||||    
T  28220609 cgtgtcacgatttgggaaaacgtgac 28220584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 37504034 - 37503930
Alignment:
Q  113 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 212  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||  |||||| |||||||| | || ||| ||||||||||||||| ||||||||||    
T  37504034 caattgtgttttgaaagaacagagaaatcgtaacacgatttcataagcgtgtcacaatttttggtagtgtcgagagcatgttttctggatgttcaatcgt 37503935  T
Q  213 gacac 217  Q
    |||||    
T  37503934 gacac 37503930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 231 - 330
Target Start/End: Complemental strand, 30476905 - 30476806
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| ||||||||| ||||||||||||||| || |||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  30476905 cgtgacacgattttcggtttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgtgac 30476806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 319
Target Start/End: Original strand, 3188964 - 3189151
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    ||||||||||||||||| ||||   |||  |||||||||||| || |||| ||| ||  ||||||| || ||| |||||||||||| |||||||| ||||    
T  3188964 cagagaaatcgtgacacaatttggcaagcgtgtcacgatttt-ggtaatgtcgagagt-tgttttcagggcgtccaatcgtgacacaattttgggaaaac 3189061  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcg-taccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||| |||||||| ||||||||||||| |||  |||||||||| ||||| |||||||||||||||||| ||| |||| ||| ||||||    
T  3189062 gtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3189151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 132 - 319
Target Start/End: Original strand, 3197781 - 3197968
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    ||||||||||||||||| ||||   |||  |||||||||||| || |||| ||| ||  ||||||| || ||| |||||||||||| |||||||| ||||    
T  3197781 cagagaaatcgtgacacaatttggcaagcgtgtcacgatttt-ggtaatgtcgagagt-tgttttcagggcgtccaatcgtgacacaattttgggaaaac 3197878  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcg-taccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||| |||||||| ||||||||||||| |||  |||||||||| ||||| |||||||||||||||||| ||| |||| ||| ||||||    
T  3197879 gtgacacgattttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgg 3197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 28223904 - 28223779
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggctt-gctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||| |||||||||| |||||||||||| ||  | ||||| |  | |||||||| |||||||||||||||||||||||| |||    
T  28223904 caatcgtgacacgattttgggaaaacgtgacacgattttcggctttgcacgacaagtatttaagataaggttggtcgtaccttgggtcgtacgcacaaaa 28223805  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||| |||||||||| ||||||    
T  28223804 cgtgtcacaatttgggaaaacgtgac 28223779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 49918035 - 49918152
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| ||||| |  |||||||||| ||||||   ||||||||||| |||| ||||||||||| |||| ||||||||||||||| |||||| |    
T  49918035 caatcgtgacacgattttcgaaaaacgtgacacgatttttaacttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatc 49918134  T
Q  306 gtgtcacgatttgggaaa 323  Q
    ||||||||||||||||||    
T  49918135 gtgtcacgatttgggaaa 49918152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 37879592 - 37879480
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||||||| |||||||  ||| |||||| ||||||| |||| |||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  37879592 tcaatcgtgacacgattttggaaaaatgtgacacgattttcagcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaa 37879493  T
Q  305 cgtgtcacgattt 317  Q
    | |||||||||||    
T  37879492 catgtcacgattt 37879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 13599004 - 13598802
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgt--tcaatcgtg 213  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||| | |    || |  |||||| ||| |  | ||  |||||||||    
T  13599004 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttctag----gcagcgagcatggtttttcaaggtattcaatcgtg 13598909  T
Q  214 acaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
     ||  |||||||| ||| |||||| |||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  13598908 tcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcac 13598809  T
Q  313 gatttgg 319  Q
     ||||||    
T  13598808 aatttgg 13598802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 13604205 - 13604318
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| |||||| |||| |||||||||||||||   ||||||||  |||||| ||||||||||| ||||||||||||||||||||| | ||| |    
T  13604205 aatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatc 13604304  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  13604305 gtgacacgatttgg 13604318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 323
Target Start/End: Original strand, 20762322 - 20762475
Alignment:
Q  171 ttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccagga 269  Q
    |||||| |||| ||| |||  |||||| || ||| |||||||||||| |||||||| || ||||||| |||||| |||||| |||||||| ||| |||||    
T  20762322 ttttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgggcaagattttcagga 20762421  T
Q  270 taaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||| ||||||||||| | ||| ||||| ||| |||| ||||||| ||||||    
T  20762422 taaggttggtcgtacctttgatcgaacgcatcaatcgtggcacgattggggaaa 20762475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 10924909 - 10925033
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||  ||| |||||| ||||||||||||| | ||||||||| ||  |||| || |||| ||||||||||| |||||| ||| |    
T  10924909 caatcgtgacacgattttggaaaaatgtgacacgattttcggcttggtaggcaagttttcaaaataaagttggtcataccttgggtcatacgcatcaacc 10925008  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||| ||||||    
T  10925009 gtgtcacgatttggcaaaacgtgac 10925033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 13547763 - 13547672
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||  |||||| |||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13547763 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaa 13547672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 13549674 - 13549583
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||  |||||| |||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13549674 cgtgacacaattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaa 13549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 1833207 - 1833332
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggca-agtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||| ||||||| |||||||| |||| | ||| |||||| ||||||||| | | | ||| || |||||||| |||| |||||||||| ||||||||||||    
T  1833207 caatggtgacacgattttgggaaaacataacacgatttttggcttgctgagtacatttttcaagataaggttggtcataccttgggttgtacgcaccaaa 1833306  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| |||| ||||||    
T  1833307 cgtgtcacgatttgcgaaaacgtgac 1833332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 4553130 - 4553006
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||| | |||||||| |||||||||| |||| | | || |||| |||||||||||  |||||| | || |||||||||| ||| |    
T  4553130 caatcgtgacacgattttgagaaaacgtgatatgattttcgacttgtttgacacgttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaacc 4553031  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||| ||| ||||||    
T  4553030 gtgtcacgatttggcaaaacgtgac 4553006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 3282223 - 3282109
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||| | |||||||||| |||||||   ||||||||| | |||| || |||||||| |||| ||||||||||||||||||||||    
T  3282223 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaa 3282124  T
Q  304 acgtgtcacgatttg 318  Q
     |||| |||||||||    
T  3282123 tcgtgccacgatttg 3282109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 312
Target Start/End: Original strand, 3156554 - 3156658
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||||||| |||||||| |||| | ||| |||||| || ||||||| || |||| ||||||||||| ||||||||||| |||| ||| |||||||||    
T  3156554 aatcgtgacacgattttgggaaaacataacacgatttttggtttgctggacacgttttcaggataaggttggtcgtacctt-ggtcatacacaccaaacg 3156652  T
Q  307 tgtcac 312  Q
    ||||||    
T  3156653 tgtcac 3156658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 13316776 - 13316683
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| |||| ||||| | ||||||    
T  13316776 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaa 13316683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 16455331 - 16455456
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||| || |||||| | || |||||||||||||| ||  || | |||| |||| ||||||||| | | ||||||||||||||||||||| |||     
T  16455331 tcaatcgtgatacgattttgagcaatcgtgacatgatttttggtatgtttggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaac 16455430  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    |||| ||||||||||  |||||||||    
T  16455431 cgtgacacgatttggccaatcgtgac 16455456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 29652269 - 29652215
Alignment:
Q  265 caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  29652269 caggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgatttgg 29652215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 21536195 - 21536266
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||| | |||| |||||| |||| ||||||||||||||||||||||||||| |||| | ||||||||    
T  21536195 cttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgatttgg 21536266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 21536133 - 21536173
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  21536133 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 21536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 46064629 - 46064717
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||| |||||| ||| |||| ||||  ||| |||||||| || ||||||||||||||||||||| | ||| |||| ||||||||||    
T  46064629 cgtgacacgatttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttgg 46064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 16124201 - 16124264
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaa 179  Q
    ||||| |||||||||||||||||||||||| |||||||||| |   |||||||||||| |||||    
T  16124201 ttgtggtttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgattttcggaaa 16124264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 13659877 - 13659799
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 196  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  13659877 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 13659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 29652418 - 29652361
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| |||||||||||||||||||||||| |||||||||| |   ||||||||||||    
T  29652418 ttgtggtttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgatttt 29652361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 13604116 - 13604152
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatt 152  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13604116 ttgtggtttggaagaacagagaaatcgtgacacgatt 13604152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 19361022 - 19361134
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||||| || ||||| || ||||||| |||||||   |||||| |  ||||||||||||||||| | |||||||||||| | |||||| |||||     
T  19361022 aatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaat 19361121  T
Q  305 cgtgtcacgattt 317  Q
    |||| ||||||||    
T  19361122 cgtgacacgattt 19361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 10924835 - 10924878
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    |||||||||||||||||||||||||||| |  ||||||||||||    
T  10924835 aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 10924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 15820053 - 15820104
Alignment:
Q  266 aggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||||||||| ||||||||||||||||||||||| ||| | |||| ||||||    
T  15820053 aggataaggttggtcgtaccttgggtcgtacgcatcaaccatgtctcgattt 15820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 26644483 - 26644593
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||| ||| |||||| | |||||||||| |||||||   |||| |||| |  ||| ||| |||||||||||||||   ||||||||||||||||| |    
T  26644483 aatcgtggcacgattttgtgaaaacgtgacacgattttcaaacttgttgggtaccttttcagaataaggtcggtcgta---tgggtcgtacgcaccaatc 26644579  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  26644580 gtggcacgatttgg 26644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 154
Target Start/End: Original strand, 24793694 - 24793724
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttc 154  Q
    |||||||||||||||||||||||||||||||    
T  24793694 tggaagaacagagaaatcgtgacacgatttc 24793724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 39446054 - 39446025
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  39446054 tggaagaacagagaaatcgtgacacgattt 39446025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 41391157 - 41391128
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  41391157 tggaagaacagagaaatcgtgacacgattt 41391128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 44023405 - 44023434
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  44023405 tggaagaacagagaaatcgtgacacgattt 44023434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 3282310 - 3282270
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  3282310 ttgtggttaggaagaacagaaaaatcgtgacacgatttcat 3282270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 80983 - 80859
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  80983 caatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 80884  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||||||    
T  80883 gtgtcacgatttgggaaatcgtgac 80859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 47676618 - 47676494
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  47676618 caatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 47676519  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||| ||||| ||||||    
T  47676518 gtgtcacgattttggaaaacgtgac 47676494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 130 - 330
Target Start/End: Original strand, 26416925 - 26417123
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    ||||||||||||||||||||||||||||||  |||||||||||  ||  ||||||| |||||||||||||   || |||| ||||||| |||||||||||    
T  26416925 aacagagaaatcgtgacacgatttcataagcgtgtcacgattt--ggttatgccgagagcatgttttctgagtgtccaattgtgacacgattttggggaa 26417022  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtga 329  Q
    | |||||| ||||||  | ||| ||| ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  26417023 atgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggccaatcgtga 26417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 27347610 - 27347726
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  27347610 caatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 27347708  T
Q  306 gtgtcacgatttgggaaa 323  Q
    |||||||| |||||||||    
T  27347709 gtgtcacggtttgggaaa 27347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 47674425 - 47674308
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  47674425 caatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggttgtacgcaccaaac 47674326  T
Q  306 gtgtcacgatttgggaaa 323  Q
    |||||||||||| |||||    
T  47674325 gtgtcacgattttggaaa 47674308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 6360612 - 6360488
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| || ||||||| |||||||||||||||||||||    
T  6360612 caattgtgacacgattttggggaaacgtgacacgattttcggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaac 6360513  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||| |||||    
T  6360512 gtgtcacgatttgggaaattgtgac 6360488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 14070319 - 14070191
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacc 301  Q
    ||||||||||||||| |||||||| |||||||||| |||||||| |||||| |||||||||  || |||||||| ||||||||||||||||||| |||||    
T  14070319 gttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcacc 14070220  T
Q  302 aaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||| ||||||    
T  14070219 aaacgtgtcacgatttgggaaaacgtgac 14070191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 14380347 - 14380219
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacc 301  Q
    ||||||||||||||| |||||||| |||||||||| |||||||| |||||| |||||||||  || |||||||| ||||||||||||||||||| |||||    
T  14380347 gttcaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcacc 14380248  T
Q  302 aaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||| ||||||    
T  14380247 aaacgtgtcacgatttgggaaaacgtgac 14380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 2647280 - 2647392
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||| ||| |||||||| ||||||||||||||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||    
T  2647280 aatcgtgtcacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcg 2647379  T
Q  307 tgtcacgatttgg 319  Q
    |||||||||||||    
T  2647380 tgtcacgatttgg 2647392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 231 - 330
Target Start/End: Complemental strand, 2761759 - 2761660
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2761759 cgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgac 2761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 4585847 - 4585964
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||| |||||| |||| |||||| ||  ||||||| |||||||||||||||||||||||||||||    
T  4585847 caatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtacgcaccaaac 4585946  T
Q  306 gtgtcacgatttgggaaa 323  Q
     |||||||||||||||||    
T  4585947 atgtcacgatttgggaaa 4585964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 4539032 - 4538920
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||||||||| |||||||| |||||||||| ||||||||| |||||  |||||||| ||||| ||||| ||||||||||||| ||||||||||||||||    
T  4539032 aatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacg 4538933  T
Q  307 tgtcacgatttgg 319  Q
    |||||||||||||    
T  4538932 tgtcacgatttgg 4538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 18126331 - 18126454
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||| ||| |||||||  |||||||| | ||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  18126331 caatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcaggataatgttggtcgtaccttgggtcgtacgcaccaaac 18126429  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||| |||| ||||||    
T  18126430 gtgtcacgatttgagaaaacgtgac 18126454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 43863947 - 43864058
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| ||||||||| ||| | || |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  43863947 caatcgtgacacgattttgggaaaacgtgacacgattttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 43864046  T
Q  306 gtgtcacgattt 317  Q
    ||| ||| ||||    
T  43864047 gtgacacaattt 43864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 203 - 330
Target Start/End: Original strand, 48489113 - 48489240
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    |||||| |||||||| |||| ||| |||||||||| | |||| ||||||||||||| | |||||||||||||| |||| |||||||||| ||||||||||    
T  48489113 gttcaaccgtgacacgatttagggaaaacgtgacacggtttttggcttgctgggcatgcttccaggataaggttggtcataccttgggttgtacgcacca 48489212  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    | ||||||||||||||| ||| ||||||    
T  48489213 atcgtgtcacgatttggcaaaacgtgac 48489240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 23554653 - 23554836
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    |||||||||||||| || ||||   |||  |||||||||||| || |||| ||| ||| ||||||| ||  || |||||||||||| |||||||| ||||    
T  23554653 cagagaaatcgtgatacaatttggcaagcgtgtcacgatttt-ggtaatgtcgagagc-tgttttcagggtgtccaatcgtgacacgattttgggaaaac 23554750  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||||| |||||||| ||||||||||||| ||| ||||||||||| |||||||| |||||||||||||| ||| |||| |||||||    
T  23554751 gtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgatt 23554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 32358536 - 32358412
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||| || |||||||| ||||||||||  |||||| |||||||||||| |||| |||||||| || | ||||||||||| |||||||||||||||    
T  32358536 caatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttcaggataaagttgatcgtaccttggatcgtacgcaccaaac 32358437  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    |||||| ||||||| |||| |||||    
T  32358436 gtgtcatgatttggaaaattgtgac 32358412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 2389760 - 2389871
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||| | ||| |||||| ||||||| |||||||||| | |||| ||||||||||| ||||||||||||| |||||| ||||||||    
T  2389760 caatcgtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgttttcaggataaggttggtcgtaccttggatcgtacacaccaaac 2389859  T
Q  306 gtgtcacgattt 317  Q
    ||||||||||||    
T  2389860 gtgtcacgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 133 - 323
Target Start/End: Original strand, 19495585 - 19495774
Alignment:
Q  133 agagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacg 232  Q
    |||||||||||||||||||||   |||  ||||||   |||||| |||| ||| ||| ||||||| ||  || |||||||||||| |||||||| |||||    
T  19495585 agagaaatcgtgacacgatttggcaagcatgtcaca--ttttggtaatgtcgagagc-tgttttcagggtgtccaatcgtgacacaattttgggaaaacg 19495681  T
Q  233 tgacatgattttc-ggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    || || ||||||  ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||| |||| |||||| |||||||    
T  19495682 tgccacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatctgggaaa 19495774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 1113367 - 1113466
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| |||||||||| || ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||| ||||||    
T  1113367 cgtgacacgattttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgac 1113466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 33332031 - 33332145
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||| ||| ||| |||||||  |||||||||| |||||||  |||||||||||  ||| || |||||||| |||||||||||||||||||||||||||     
T  33332031 tcaattgtgtcacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaat 33332130  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  33332131 cgtgtcacgatttgg 33332145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 130 - 297
Target Start/End: Complemental strand, 30026562 - 30026391
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctg------gac-gttcaatcgtgacaccattt 222  Q
    ||||||||||||||||||||||||| || |  |||||||||||  ||  ||||||| |||||||||||||      ||  | ||||||||||||  ||||    
T  30026562 aacagagaaatcgtgacacgatttcttaggcgtgtcacgattt--ggctatgccgagagcatgttttctgagtgatgagtgatcaatcgtgacatgattt 30026465  T
Q  223 tggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacg 297  Q
    ||||||||||||||| ||||||| |||||| ||||| |||| ||||||||||| |||||||||||| ||||||||    
T  30026464 tggggaaacgtgacacgattttcagcttgccgggcacgttt-caggataaggttggtcgtaccttgagtcgtacg 30026391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 48491289 - 48491388
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| ||||||||||||| |||||| | || || ||| |||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  48491289 cgtgacacgattttcggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgac 48491388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 323
Target Start/End: Original strand, 4178425 - 4178578
Alignment:
Q  171 ttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccagga 269  Q
    |||||| |||| ||| |||  |||||| || ||| |||||||||||| |||||||| || ||||||| |||||| |||||| | |||||| ||| |||||    
T  4178425 ttttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttaggcaagattttcagga 4178524  T
Q  270 taaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||| ||||||||||||| ||||||||| ||| |||| || |||| ||||||    
T  4178525 taaggttggtcgtaccttggatcgtacgcatcaatcgtggcaagattggggaaa 4178578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 317
Target Start/End: Original strand, 4796175 - 4796362
Alignment:
Q  129 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt-ctggacgttcaatcgtgacaccattttgggg 227  Q
    ||||| |||||||||||||||||||||| |   |||||||||||| || |||| ||| ||  |||||| | ||  | ||||||||||||| |||||||      
T  4796175 gaacaaagaaatcgtgacacgatttcatcaacgtgtcacgatttt-ggtaatgtcgagagt-tgttttgcagggtgctcaatcgtgacacgattttggaa 4796272  T
Q  228 aaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||||||||| |||||||  |||| |||||| |||| |||||||  || ||||||||||||| |||||||||||||| || |||| ||||    
T  4796273 aaacgtgacacgattttcaacttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgcaccaaatgtatcacaattt 4796362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 21983846 - 21983644
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgac 215  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   || |||||||||  | |||| ||  |||  |||| | ||  |  |||||| | |    
T  21983846 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgatttt--gcaatgtcgtgagctggtttgcagggtgaccaatcgcggc 21983749  T
Q  216 accattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    |  |||||| | |||||||||| |||||||   |||| |||| | |||| ||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  21983748 atgattttgtgaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacga 21983649  T
Q  315 tttgg 319  Q
    |||||    
T  21983648 tttgg 21983644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 35853626 - 35853709
Alignment:
Q  234 gacatgattttcggcttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||| |||| |||||||    
T  35853626 gacacgatttttggcttgctgggcaagtttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 35853709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 24515218 - 24515125
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||  ||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  24515218 cgtgacacaatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 24515125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 31733419 - 31733354
Alignment:
Q  219 attttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    ||||| |||||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||||    
T  31733419 attttagggaaacgtgacacaattttcggcttgctgggcaagttttcaggataaggttggtcgtac 31733354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 6570279 - 6570403
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||| ||||||| ||||| || || ||||||| |||||| ||| |||| | || ||||  |||||||||| | |||||||||||||| |||||| ||| |    
T  6570279 caattgtgacacaattttaggcaatcgtgacacgatttttggcatgcttgacacgtttttaggataaggttgatcgtaccttgggtcatacgcatcaacc 6570378  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||  |||||||||    
T  6570379 gtgtcacgatttggccaatcgtgac 6570403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 46515923 - 46516014
Alignment:
Q  239 gattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||| |||||| |||||| |||| ||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||| ||| ||||||    
T  46515923 gatttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgac 46516014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 324
Target Start/End: Complemental strand, 21989510 - 21989304
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgac 215  Q
    ||||| |||||||||||||||||||||||||| |||||||| |   || |||||||||  | |||| ||  |||  |||| | || ||  |||||||| |    
T  21989510 ttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgatttt--gcaatgtcgtgagctggtttgcagggcgaccaatcgtggc 21989413  T
Q  216 accattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacga 314  Q
    || |||||| | |||||||||| |||||||   |||| |||| | |||| ||||||||||| | |||||||||||||| |||||| ||| ||||||| ||    
T  21989412 acgattttgtg-aaacgtgacacgattttccaacttgatgggtacgttttcaggataaggttgatcgtaccttgggtcatacgcagcaatcgtgtcatga 21989314  T
Q  315 tttgggaaat 324  Q
    ||||| ||||    
T  21989313 tttggaaaat 21989304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 49092208 - 49092093
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||||| ||| |||||| ||||||||  ||||||||| | ||||  ||||||||||| ||||||||||||| ||||| ||||||    
T  49092208 tcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtcgtaccttggatcgtatgcacca 49092109  T
Q  303 aacgtgtcacgatttg 318  Q
    |  ||| |||||||||    
T  49092108 atagtgacacgatttg 49092093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 44847760 - 44847821
Alignment:
Q  258 aagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||| ||||||||||| ||||||||||||||||||||| | ||| |||| ||||||||||    
T  44847760 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg 44847821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 46515827 - 46515880
Alignment:
Q  120 gttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  46515827 gttttggaagaacagagaaatcgtgacacgatttcattaacgtgtcacgatttt 46515880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 79992 - 79936
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  79992 ttgtgatttggaagaacagagaaatcgtgacacgatttcattaacgtgtcacgattt 79936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 29608220 - 29608299
Alignment:
Q  206 caatcgtgacaccatttt-ggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||||||| ||||| ||||||| |||| |  ||||||| |||| ||||||||||| ||||||||||| ||||||||    
T  29608220 caatcgtgacacgatttttggggaaaagtgatacaattttcgacttgttgggcaagttttcaggataaggttggtcgtac 29608299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 48599978 - 48599932
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgc 252  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  48599978 caatcgtgacacgattatggggaaacgtgacacgattttcggcttgc 48599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 2479798 - 2479757
Alignment:
Q  258 aagtttccaggataaggtcggtcgtaccttgggtcgtacgca 299  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  2479798 aagttttcaggataaggttggtcgtaccttgggtcgtacgca 2479757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 31109090 - 31109127
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  31109090 ttgtggtttggaagaacagagaaatcgtgacacgattt 31109127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 29990775 - 29990858
Alignment:
Q  241 ttttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||| ||||||||||||||| |||  |||||||| | | |||||||||| |||||||||| ||| |||| ||||||| ||||||    
T  29990775 tttttggcttgctgggcaagatttttaggataagattgatcgtaccttgagtcgtacgcatcaatcgtggcacgattggggaaa 29990858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 47264115 - 47264044
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||  |||||| ||||||||||| ||||||| ||||||||||||| | ||| | || ||||||||||    
T  47264115 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcttgacacgatttgg 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 4539106 - 4539064
Alignment:
Q  131 acagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4539106 acagagaaatcgtgacacgatttcataggcgtgtcacgatttt 4539064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 2058576 - 2058547
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  2058576 tggaagaacagagaaatcgtgacacgattt 2058547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 2361639 - 2361562
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatga-ttttcggcttgctgggcaagtttccaggataaggtcggtcgta 283  Q
    ||||||||||| |||||||||||||||||||  | ||||||  ||||||| ||| |||  |||||||||| |||||||    
T  2361639 aatcgtgacacgattttggggaaacgtgacacaatttttcgatttgctggacaaatttttaggataaggttggtcgta 2361562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 3050554 - 3050501
Alignment:
Q  277 ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||||||| ||| |||| ||  |||||| ||||||||||    
T  3050554 ggtcgtaccttgggtcgtacgcatcaatcgtgacatcatttggaaaatcgtgac 3050501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 4873693 - 4873664
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  4873693 tggaagaacagagaaatcgtgacacgattt 4873664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 12406829 - 12406800
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  12406829 tggaagaacagagaaatcgtgacacgattt 12406800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 20357056 - 20357085
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  20357056 tggaagaacagagaaatcgtgacacgattt 20357085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 21640395 - 21640366
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  21640395 tggaagaacagagaaatcgtgacacgattt 21640366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 25767436 - 25767312
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttc-ggcttgctgggcaagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||||| |||||||| || ||||||| |||||||   |||||| |  ||||||| ||||||||| | |||||| ||||| | |||||| |||||     
T  25767436 aatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacgtacgtaccaat 25767337  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    |||| ||||| || ||||||||||||    
T  25767336 cgtgacacgactt-ggaaatcgtgac 25767312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 29608292 - 29608333
Alignment:
Q  289 ggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||||||||||| |||| ||||||| ||||    
T  29608292 ggtcgtacgcaccaaacgtgtcacaatttaggaaatcatgac 29608333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 39731095 - 39731167
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||| ||||||| | |||||||||||||| |||||| ||||| |||| |||||| | ||||||||||||    
T  39731095 aagtttccatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgatct-ggaaatcgtgac 39731167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 47264246 - 47264209
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  47264246 ttgtggtttggaagaatagagaaatcgtgacacgattt 47264209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 79907 - 79791
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||||| ||| |||||||  ||| |||||| |||||||   ||||||||| | ||||  ||||||||||| |||||||| ||||||| || ||||||    
T  79907 tcaatcgtgtcacgattttggaaaaatgtgacaagattttcaaacttgctgggtacgtttttcaggataaggttggtcgtacattgggtcatatgcacca 79808  T
Q  303 aacgtgtcacgatttgg 319  Q
    | |  ||||||||||||    
T  79807 atcacgtcacgatttgg 79791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 148
Target Start/End: Complemental strand, 21646622 - 21646590
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacac 148  Q
    ||||| |||||||||||||||||||||||||||    
T  21646622 ttgtggtttggaagaacagagaaatcgtgacac 21646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 24023847 - 24023875
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatt 152  Q
    |||||||||||||||||||||||||||||    
T  24023847 tggaagaacagagaaatcgtgacacgatt 24023875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 42426717 - 42426593
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| ||||||||||  |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42426717 caatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 42426618  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
     ||||||||||||||||| ||||||    
T  42426617 atgtcacgatttgggaaaacgtgac 42426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 13487890 - 13488013
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||||||| |||||||| ||||   ||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13487890 tcaatcgtgacacgattttgggaaaacagcac--gattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaa 13487987  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||| ||||||    
T  13487988 cgtgtcacgatttgggaaaacgtgac 13488013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 32636509 - 32636634
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||| ||||||| || |||||||| ||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||    
T  32636509 caatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcttacgcaccaaa 32636608  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||||| ||||||    
T  32636609 cgtgtcacgatttgggaaaacgtgac 32636634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 27015025 - 27015124
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| ||||||| ||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27015025 cgtgacacgattttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 27015124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 13239364 - 13239548
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    |||||| |||||||||||||||||  ||||  |||||||||||| || |||| ||| ||| ||||||  ||  ||||||||||||||  |||||||| ||    
T  13239364 aacagataaatcgtgacacgatttggtaagcgtgtcacgatttt-ggtaatgtcgagagc-tgtttttagggtgttcaatcgtgacaagattttgggtaa 13239461  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||||||| ||| || | |||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||| |||| |||||||    
T  13239462 acgtgacacgatctttgacttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatt 13239548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 19806117 - 19806216
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| ||||||||||||||| |||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  19806117 cgtgacacgattttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacgtgac 19806216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 535614 - 535700
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  535614 cgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 5057517 - 5057641
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||  ||||||||||  ||||||| |||| || |||||||| ||||||||||| ||||||||||| ||||||||||| ||| |    
T  5057517 caatcgtgacacgattttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtcgtacctttggtcgtacgcatcaacc 5057616  T
Q  306 gtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| |||||||||| ||||||    
T  5057617 gtgtcacaatttgggaaaacgtgac 5057641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 30683464 - 30683312
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    ||||||||||||||||||| |||| | |||  |||||||||||| || |||| ||| || |||||||| |   || |||||||||||| |||||||| ||    
T  30683464 aacagagaaatcgtgacacaatttgacaagcgtgtcacgatttt-ggtaatgtcgagag-atgttttcagagtgtccaatcgtgacacaattttgggaaa 30683367  T
Q  230 acgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||| |||||||| |||||| ||||||||| ||||||||||| ||||||||    
T  30683366 acgtgacacgattttcgacttgctaggcaagttttcaggataaggttggtcgtac 30683312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 37438831 - 37438942
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||| |||||||| ||| |||||||||||  |||||||||||||||||||||| |||     
T  37438831 caatcgtgacatgattttgggaaaacgtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcgtaccttgggtcgtacgcatcaat 37438930  T
Q  305 cgtgtcacgatt 316  Q
    |||| |||||||    
T  37438931 cgtgacacgatt 37438942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 11916552 - 11916678
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   |||| |||| | |||| |||||| |||| |||||||||||||||||||||||||||    
T  11916552 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtatgttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaa 11916651  T
Q  304 acgtgtcacgatttgggaaatcgtgac 330  Q
     ||| |||||||||| |||| ||||||    
T  11916652 tcgtatcacgatttgagaaaacgtgac 11916678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 14520833 - 14520631
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttct--ggacgttcaatcgtg 213  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||  |    || |  |||||| |||||  ||  | |||||||||    
T  14520833 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttcag----gcagggagcatggtttctcagggtgctcaatcgtg 14520738  T
Q  214 acaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
     ||  |||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| |||||||||||||||||||||||  || ||||||||    
T  14520737 tcatgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcattaatcgtgtcac 14520638  T
Q  313 gatttgg 319  Q
    |||||||    
T  14520637 gatttgg 14520631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 16651105 - 16650991
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||| |||||| |||||||| |||||||||| |||||    |||| |||| | |||| ||||||||||| ||||||||||||| |||||||||||||     
T  16651105 tcaatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggttggtcgtaccttggatcgtacgcaccaac 16651006  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  16651005 cgtgtcacgatttgg 16650991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 39468989 - 39468903
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||| ||||||||||||||||| || ||||  |||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  39468989 cgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcatgattt 39468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 38746535 - 38746597
Alignment:
Q  268 gataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38746535 gataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcatgac 38746597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 42428900 - 42428822
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||  |||||||||| ||||||||    
T  42428900 caatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagtttttaggataaggttggtcgtac 42428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 25412472 - 25412565
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  25412472 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaa 25412565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 38746453 - 38746534
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||||||||||  ||||||  |||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  38746453 gttcaatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtac 38746534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 12083773 - 12083873
Alignment:
Q  220 ttttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    ||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  12083773 ttttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgatttg 12083872  T
Q  319 g 319  Q
    |    
T  12083873 g 12083873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 13342771 - 13342864
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||| | ||||||||| ||| |||| ||||||| ||||||    
T  13342771 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaa 13342864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 31004734 - 31004849
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttcc-aggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| ||| |||| |||||||| | ||| |||  ||||||||||| ||||   |||||||||| ||| |||| ||||||||||||||||||    
T  31004734 tcaatcgtgtcacgattgtgggaaaacgtgatacgatattcaacttgctgggcacgttttttaggataaggttggttgtactttgggtcgtacgcaccaa 31004833  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  31004834 tcgtgtcacgatttgg 31004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 30182306 - 30182384
Alignment:
Q  239 gattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| |||| |||||||    
T  30182306 gatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgatt 30182384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 533412 - 533499
Alignment:
Q  129 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacac 217  Q
    |||| ||||||||||||||||||||||||||    |||||| |||||| | |||||| ||||||||||||| | |||||||||||||||    
T  533412 gaacggagaaatcgtgacacgatttcataagcgcatcacga-ttttggtagtgccgagagcatgttttctgcatgttcaatcgtgacac 533499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 535534 - 535621
Alignment:
Q  129 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacac 217  Q
    |||||||||||||||||||||||||||||||  |||||| | |||||| | || ||| ||| ||||||||||| ||||| |||||||||    
T  535534 gaacagagaaatcgtgacacgatttcataagcgtgtcac-aattttggtagtgtcgagagcgtgttttctggatgttcagtcgtgacac 535621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 16650044 - 16649992
Alignment:
Q  267 ggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttgg 16649992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 533492 - 533579
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||            | ||||||||||||||||||||||||||||||||||| ||||||    
T  533492 cgtgacacggttttcggcttgctgggcaagttttcaggataagg------------ttggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgac 533579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 40146735 - 40146825
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtac 296  Q
    |||||||||||| |||||||| ||| |||||  ||||||| ||||| ||| || |||| ||||| || || ||||||||||||||||||||    
T  40146735 caatcgtgacacgattttgggaaaatgtgactcgattttcagcttgttggtcacgttttcaggaaaaagttggtcgtaccttgggtcgtac 40146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 40146818 - 40146858
Alignment:
Q  277 ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  40146818 ggtcgtaccttgggtcgtactcaccaaacgtgtcacgattt 40146858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 9352959 - 9353030
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||||||  | ||| |||| ||||||||||    
T  9352959 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgatttgg 9353030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 12083677 - 12083711
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcat 156  Q
    |||||||||||||||||||||||||||||||||||    
T  12083677 tttggaagaacagagaaatcgtgacacgatttcat 12083711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 36074492 - 36074416
Alignment:
Q  241 ttttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||| |||||| |||||||| ||| ||||||||||| ||||||||||||| ||||||||| ||| | || |||||||    
T  36074492 tttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcatggcacgatt 36074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 36931984 - 36932044
Alignment:
Q  258 aagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    |||||| ||||||||||| ||||||||||||||||||||| | ||| |||| ||| |||||    
T  36931984 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttg 36932044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 15045253 - 15045222
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||||    
T  15045253 tttggaagaacagagaaatcgtgacacgattt 15045222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 31180802 - 31180771
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttca 155  Q
    ||||||||||||||||||||||||||||||||    
T  31180802 tggaagaacagagaaatcgtgacacgatttca 31180771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 43592826 - 43592795
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttca 155  Q
    ||||||||||||||||||||||||||||||||    
T  43592826 tggaagaacagagaaatcgtgacacgatttca 43592795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 36931864 - 36931898
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacga 150  Q
    ||||| |||||||||||||||||||||||||||||    
T  36931864 ttgtggtttggaagaacagagaaatcgtgacacga 36931898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 1456666 - 1456695
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  1456666 tggaagaacagagaaatcgtgacacgattt 1456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 11916465 - 11916522
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 173  Q
    ||||| |||| |||||||||||||||||||||| ||||||| |   ||||||||||||    
T  11916465 ttgtggtttgaaagaacagagaaatcgtgacacaatttcatcaacgtgtcacgatttt 11916522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 27450381 - 27450352
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  27450381 tggaagaacagagaaatcgtgacacgattt 27450352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 29402578 - 29402607
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  29402578 tggaagaacagagaaatcgtgacacgattt 29402607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 30631920 - 30631891
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  30631920 tggaagaacagagaaatcgtgacacgattt 30631891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 43599290 - 43599261
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  43599290 tggaagaacagagaaatcgtgacacgattt 43599261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 43604782 - 43604753
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  43604782 tggaagaacagagaaatcgtgacacgattt 43604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 43610274 - 43610245
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  43610274 tggaagaacagagaaatcgtgacacgattt 43610245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 16407803 - 16407863
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||| ||||||| | |||||||||||||| ||||||| |||| |||| ||||||||    
T  16407803 aagtttccatgataaggaccggtcgtaccttgggacgtacgctccaatcgtgacacgattt 16407863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 2837326 - 2837209
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    |||||||||||| |||||||| |||||||||| |||||||  ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  2837326 caatcgtgacacgattttgggaaaacgtgacacgattttcaccttgctgggtaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaac 2837227  T
Q  306 gtgtcacgatttgggaaa 323  Q
    |||||| |||||||||||    
T  2837226 gtgtcatgatttgggaaa 2837209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 132 - 319
Target Start/End: Complemental strand, 34389438 - 34389252
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    |||||||||| |||||||||||   |||  |||||||||||| || |||| ||| ||  ||||||| ||  || |||||||||||| |||||||| ||||    
T  34389438 cagagaaatcatgacacgatttggcaagcgtgtcacgatttt-ggtaatgtcgagagt-tgttttcagggtgtccaatcgtgacacgattttgggaaaac 34389341  T
Q  232 gtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||| |||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  34389340 gtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg 34389252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 20522738 - 20522624
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||| | |||||||||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||     
T  20522738 tcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaat 20522639  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||| ||||||    
T  20522638 cgtgtcacaatttgg 20522624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 36318492 - 36318379
Alignment:
Q  206 caatcgtgacaccatttt-ggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||| || |||| ||||||||||| ||||||||||||  |||||||||||||     
T  36318492 caatcgtgacacgatttttggggaaacgtgacacgattttcggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaac 36318393  T
Q  305 cgtgtcacgatttg 318  Q
    |||||||| |||||    
T  36318392 cgtgtcacaatttg 36318379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 36988630 - 36988447
Alignment:
Q  132 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaaac 231  Q
    |||||||||||||| |||||||   |||  |||||||||||| || |||| ||| ||| ||||||| ||  || |||||||||||  |||||||| ||||    
T  36988630 cagagaaatcgtgagacgatttggcaagcgtgtcacgatttt-ggtaatgtcgagagc-tgttttcagggtgtccaatcgtgacatgattttgggaaaac 36988533  T
Q  232 gtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatt 316  Q
    |||||| |||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||  ||| |||||||    
T  36988532 gtgacacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacgcatcaattgtgacacgatt 36988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 35447586 - 35447460
Alignment:
Q  203 gttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcacca 302  Q
    ||||||| || |||| |||||||| ||| |||||| |||| |||| |||  |||||||||| || |||||||| | ||||||||||||||||||||||||    
T  35447586 gttcaattgtaacacgattttgggaaaatgtgacacgattatcggtttgtcgggcaagttttcaagataaggttgctcgtaccttgggtcgtacgcacca 35447487  T
Q  303 aacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||| |||||||||||||||    
T  35447486 aacgtgtcacga-ttgggaaatcgtgac 35447460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 21630461 - 21630347
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| ||| |||||||| |||| ||||| |||||||  ||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||||     
T  21630461 tcaatcgtgtcacaattttgggaaaacatgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaat 21630362  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  21630361 cgtgtcacgatttgg 21630347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 14698578 - 14698704
Alignment:
Q  193 ttttctggacgttcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtc 292  Q
    ||||||||| ||||| ||||  ||| |||||||| |||||||||| |||||||  |||| ||||||  ||| ||||||||||| ||||||||||||||||    
T  14698578 ttttctggatgttcattcgtatcacgattttgggaaaacgtgacacgattttcaacttgttgggcacattttcaggataaggttggtcgtaccttgggtc 14698677  T
Q  293 gtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||||| | | |||||||||||    
T  14698678 gtacgcaccaaccatttcacgatttgg 14698704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 33528204 - 33528319
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   ||||||||| | |||| ||| ||||||| | |||||||||||||||||||||||||    
T  33528204 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttgatcgtaccttgggtcgtacgcaccaa 33528303  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  33528304 tcgtgtcacgatttgg 33528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 39483393 - 39483278
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| |||||||||||||||| ||||||||||    
T  39483393 tcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgggtcttacgcaccaa 39483294  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  39483293 tcgtgtcacgatttgg 39483278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 45099440 - 45099558
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    |||||||||||| |||||||| ||  |||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||  ||||||||| |||     
T  45099440 caatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcaat 45099539  T
Q  305 cgtgtcacgatttgggaaa 323  Q
    |||| ||||||| ||||||    
T  45099540 cgtggcacgattggggaaa 45099558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 2334875 - 2334782
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||| || ||| |||| ||||||||||||||    
T  2334875 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaa 2334782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 33118651 - 33118537
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||| |||  |||| || ||||||||||  ||||||  |||||||||||  ||| || |||||||| || ||||||||||||||||||||||||     
T  33118651 tcaatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaat 33118552  T
Q  305 cgtgtcacgatttgg 319  Q
    |||||||||||||||    
T  33118551 cgtgtcacgatttgg 33118537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 5723712 - 5723619
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| |||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  5723712 cgtgacacgatttttggcttgctggacaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaa 5723619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 39284585 - 39284661
Alignment:
Q  208 atcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtac 284  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||| |||||| ||||||||||| ||||||||    
T  39284585 atcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggaaagttttcaggataaggttggtcgtac 39284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 23078052 - 23078167
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||| ||| ||| |||||||| |||||||||| |||||||   |||| |||| | |||| ||||||||||| ||||||| |||||||||||||||||||    
T  23078052 tcaattgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtatcttgggtcgtacgcaccaa 23078151  T
Q  304 acgtgtcacgatttgg 319  Q
     |||| ||||||||||    
T  23078152 tcgtgccacgatttgg 23078167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 4503590 - 4503497
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||| |||  ||| ||||||| ||||||    
T  4503590 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaa 4503497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 17865694 - 17865589
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||||| || ||| |||||||| ||| |||||| |||||||   ||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  17865694 tcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 17865595  T
Q  304 acgtgt 309  Q
     |||||    
T  17865594 tcgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 28258760 - 28258873
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||| ||| |||||| | || ||||||| |||||||   ||||||||  |||||| ||||||||||| ||||||||||||||||||||||| ||| |    
T  28258760 aatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatc 28258859  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  28258860 gtggcacgatttgg 28258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 263
Target Start/End: Original strand, 29867491 - 29867622
Alignment:
Q  130 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccattttggggaa 229  Q
    ||||||||||||||||||||||||   |||  || ||||||||| || |||| ||| ||  ||||||| ||  || |||||||||||| |||||||| ||    
T  29867491 aacagagaaatcgtgacacgatttggcaagcgtgacacgatttt-ggtaatgtcgagagt-tgttttcagggtgtccaatcgtgacacgattttgggaaa 29867588  T
Q  230 acgtgacatgattttcggcttgctgggcaagttt 263  Q
    |||||||| |||||||| ||||||||||||||||    
T  29867589 acgtgacacgattttcgacttgctgggcaagttt 29867622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 319
Target Start/End: Original strand, 10706752 - 10706948
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttct--ggacgttcaatcgtgacacca 219  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||  |    || |  |||||| |||||  ||  | ||||| ||| ||| |    
T  10706752 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttcag----gcagggagcatggtttctcagggtgctcaattgtgtcacga 10706847  T
Q  220 ttttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    ||||||| |||||||||| |||||||   ||||||||  | ||||  |||||||||| |||||||||||||||||||| |||||| |||| |||| ||||    
T  10706848 ttttgggaaaacgtgacacgattttcaaacttgctggatacgttttaaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgccacggtttg 10706947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 6595477 - 6595398
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtac 284  Q
    |||||||||||| |||||||| |||||||||| |||||| |||||||||||| || ||| |||||||||||  |||||||    
T  6595477 caatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgggctagattttcaggataaggttagtcgtac 6595398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 36206123 - 36206030
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    ||||||| |||||| ||||||||||| ||| ||| ||||||||||| ||||||||||||| | ||||||| |||  ||| ||||||| ||||||    
T  36206123 cgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttggattgtacgcatcaattgtggcacgattggggaaa 36206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 8389644 - 8389684
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  8389644 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 8389684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 8389732 - 8389844
Alignment:
Q  209 tcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttc-caggataaggtcggtcgtaccttgggtcgtacgcaccaaacg 306  Q
    ||||| ||| |||||||| |||||||||| |||||||   ||||||| | | ||||  ||||||||||| || |||||||||||||||||||||||| |     
T  8389732 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgagtacgtttttcaggataaggttggacgtaccttgggtcgtacgcaccaatca 8389831  T
Q  307 tgtcacgatttgg 319  Q
    ||||| |||||||    
T  8389832 tgtcatgatttgg 8389844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 17057813 - 17057747
Alignment:
Q  129 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 196  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||||| |||| ||| ||||||||||    
T  17057813 gaacagagaaatcgtgacacaatttcataagcgtgtcacg-tttttggcaatgtcgagagcatgtttt 17057747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 17085796 - 17085730
Alignment:
Q  129 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 196  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||||| |||| ||| ||||||||||    
T  17085796 gaacagagaaatcgtgacacaatttcataagcgtgtcacg-tttttggcaatgtcgagagcatgtttt 17085730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 21630542 - 21630492
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  21630542 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 21630492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 23077971 - 23078005
Alignment:
Q  122 tttggaagaacagagaaatcgtgacacgatttcat 156  Q
    |||||||||||||||||||||||||||||||||||    
T  23077971 tttggaagaacagagaaatcgtgacacgatttcat 23078005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 30833031 - 30833155
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttc-ggcttgctgggcaagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||||||||| || ||||| || ||||||| |||||||   |||||| |  ||||||||||||||||| | |||||||||||| | |||||| |||||     
T  30833031 aatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaat 30833130  T
Q  305 cgtgtcacgatttgggaaatcgtgac 330  Q
    |||| ||||| || ||||||||||||    
T  30833131 cgtgacacgactt-ggaaatcgtgac 30833155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 39284654 - 39284695
Alignment:
Q  289 ggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  39284654 ggtcgtacgcaccaaatgtgtcacgatttgggaaaacgtgac 39284695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 33528118 - 33528158
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  33528118 ttgtggtttggaagaacagagaaatcgtgacacaatttcat 33528158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 39483480 - 39483440
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  39483480 ttgtggtttggaagaacagagaaattgtgacacgatttcat 39483440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 13569785 - 13569732
Alignment:
Q  265 caggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||||| | ||||||||||| ||||| ||||||| |||||||||||||||    
T  13569785 caggataaggttg-tcgtaccttggatcgtaagcaccaatcgtgtcacgatttgg 13569732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 323
Target Start/End: Original strand, 29867641 - 29867671
Alignment:
Q  293 gtacgcaccaaacgtgtcacgatttgggaaa 323  Q
    |||||||||||||||||||||||||||||||    
T  29867641 gtacgcaccaaacgtgtcacgatttgggaaa 29867671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 3492215 - 3492143
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||||||||||| | |||||||||||| | |||||| ||||| |||| ||||| || ||||||||||||    
T  3492215 aagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgactt-ggaaatcgtgac 3492143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 9295890 - 9295919
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  9295890 tggaagaacagagaaatcgtgacacgattt 9295919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 11098415 - 11098444
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  11098415 tggaagaacagagaaatcgtgacacgattt 11098444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 14292097 - 14292068
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  14292097 tggaagaacagagaaatcgtgacacgattt 14292068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 17863878 - 17863935
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagttt 263  Q
    |||||||||||  |||||||| |||||||||| ||||||   ||||||||||||||||    
T  17863878 caatcgtgacataattttgggaaaacgtgacacgattttttacttgctgggcaagttt 17863935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 28258690 - 28258727
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  28258690 ttgtggtttggaaaaacagagaaatcgtgacacgattt 28258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 32247324 - 32247295
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  32247324 tggaagaacagagaaatcgtgacacgattt 32247295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 36757438 - 36757475
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  36757438 ttgtggtttggaagaacagaaaaatcgtgacacgattt 36757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 39811505 - 39811534
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  39811505 tggaagaacagagaaatcgtgacacgattt 39811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 44310499 - 44310528
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  44310499 tggaagaacagagaaatcgtgacacgattt 44310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 20522825 - 20522769
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||| ||||||||||||||||||||||||||  ||||||| |   |||||||||||    
T  20522825 ttgtggtttggaagaacagagaaatcgtgacataatttcatcaacgtgtcacgattt 20522769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 20897 - 20784
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||| |||||| |||||||| |||||||||| ||||||||||||| |||| ||||||  || ||||||| |||||||||||||||||||||||| ||||    
T  20897 caatcatgacacgattttgggaaaacgtgacacgattttcggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcactaaac 20798  T
Q  306 gtgtcacgatttgg 319  Q
    ||||||||||||||    
T  20797 gtgtcacgatttgg 20784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 17742 - 17635
Alignment:
Q  210 cgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgt 309  Q
    |||||||| |||||||| |||||||||| |||||| ||||||||||||||| || || |||||||| ||||||||| || ||||||||||||||||||||    
T  17742 cgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttcatgataaggttggtcgtaccctgagtcgtacgcaccaaacgtgt 17643  T
Q  310 cacgattt 317  Q
    ||||||||    
T  17642 cacgattt 17635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 3010 - 2895
Alignment:
Q  205 tcaatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    ||||||||| ||| |||||||| |||||||||  |||||||   ||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  3010 tcaatcgtgtcacgattttgggaaaacgtgacccgattttcaaacttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaa 2911  T
Q  304 acgtgtcacgatttgg 319  Q
     |||||||||||||||    
T  2910 tcgtgtcacgatttgg 2895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 6289 - 6087
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgt--tcaatcgtg 213  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||| | |    || |  |||||| ||| |  | ||  |||||||||    
T  6289 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttctag----gcagcgagcatggtttttcaaggtattcaatcgtg 6194  T
Q  214 acaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcac 312  Q
     ||  |||||||| ||| |||||| |||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  6193 tcatgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcac 6094  T
Q  313 gatttgg 319  Q
     ||||||    
T  6093 aatttgg 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 132862 - 132975
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||||||| |||||| |||| |||||||||||||||   ||||||||  |||||| ||||||||||| ||||||||||||||||||||| | ||| |    
T  132862 aatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatc 132961  T
Q  306 gtgtcacgatttgg 319  Q
    ||| ||||||||||    
T  132962 gtgacacgatttgg 132975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 149638 - 149560
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 196  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  149638 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 3097 - 3057
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 156  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  3097 ttgtggtttggaagaacagagaaatcatgacacgatttcat 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 132773 - 132809
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatt 152  Q
    ||||| |||||||||||||||||||||||||||||||    
T  132773 ttgtggtttggaagaacagagaaatcgtgacacgatt 132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 434217 - 434336
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttc-ggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaa 303  Q
    |||||||||||| |||||||| || ||||||| ||||||  ||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||  ||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaa 434316  T
Q  304 acgtgtcacgatttgggaaa 323  Q
     |||| ||||||| ||||||    
T  434317 tcgtggcacgattggggaaa 434336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 36415 - 36528
Alignment:
Q  207 aatcgtgacaccattttggggaaacgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaac 305  Q
    ||||||| ||| |||||| | ||||||||||  ||||||   ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||| |    
T  36415 aatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatc 36514  T
Q  306 gtgtcacgatttgg 319  Q
     || ||||||||||    
T  36515 atggcacgatttgg 36528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 43568 - 43657
Alignment:
Q  231 cgtgacatgattttcgg-cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    |||||||||||||||   ||||||||  |||||| ||||||||||| ||||||||||||||||||| | | ||| |||| ||||||||||    
T  43568 cgtgacatgattttcaaacttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatcgtggcacgatttgg 43657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 6820 - 6907
Alignment:
Q  231 cgtgacatgattttcggcttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    ||||||| |||||||  |||||| || | |||| ||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||    
T  6820 cgtgacacgattttcaacttgctaggaacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttg 6907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 114272 - 114382
Alignment:
Q  206 caatcgtgacaccattttggggaaacgtgacatgattttcggcttgctgggcaag-tttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaa 304  Q
    ||||| |||||| || ||||| |||||||||| |||||| ||||||||||||||  ||| ||||||||||| ||| ||||||||||||||||||| ||      
T  114272 caatcatgacacgatattgggaaaacgtgacacgatttt-ggcttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatcact 114370  T
Q  305 cgtgtcacgatt 316  Q
    |||| |||||||    
T  114371 cgtgacacgatt 114382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 8052 - 8112
Alignment:
Q  258 aagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttg 318  Q
    |||||| ||||||||||| ||||||||||||||||||||| | ||| |||| |||||||||    
T  8052 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttg 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 45671 - 45600
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgg 319  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||||||  | ||| |||| ||||||||||    
T  45671 cttgctggctaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtgacacgatttgg 45600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 45783 - 45746
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgattt 153  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  45783 ttgtggtttggaagaacagagaaatcgtgacacaattt 45746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 11592 - 11520
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgac 330  Q
    ||||||||| ||||||| | |||||||||||||| |||||||||||| |||| |||||| | ||||||||||||    
T  11592 aagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacgatct-ggaaatcgtgac 11520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 9147 - 9087
Alignment:
Q  258 aagtttccaggataaggtc-ggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 317  Q
    ||||||||| ||||||| | |||||||||||||| |||||||||||| |||| ||||||||    
T  9147 aagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacgattt 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 11734 - 11698
Alignment:
Q  114 aattgtgttttggaagaacagagaaatcgtgacacga 150  Q
    ||||||| | |||||||||||||||||||||||||||    
T  11734 aattgtggtctggaagaacagagaaatcgtgacacga 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 86190 - 86134
Alignment:
Q  116 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 172  Q
    ||||| |||||||||| |||||||||||||||||||||||| |   |||||||||||    
T  86190 ttgtggtttggaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgattt 86134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 8245 - 8214
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgatttca 155  Q
    ||||||||||||||||||||||||||||||||    
T  8245 tggaagaacagagaaatcgtgacacgatttca 8214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 1737 - 1766
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  1737 tggaagaacagagaaatcgtgacacgattt 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 1235 - 1284
Alignment:
Q  248 cttgctgggcaagtttccaggataaggtcggtcgtaccttgggtcgtacg 297  Q
    ||||||||  |||||| ||||||||||| ||||||||||| |||||||||    
T  1235 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacg 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 917 - 888
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  917 tggaagaacagagaaatcgtgacacgattt 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 34582 - 34611
Alignment:
Q  124 tggaagaacagagaaatcgtgacacgattt 153  Q
    ||||||||||||||||||||||||||||||    
T  34582 tggaagaacagagaaatcgtgacacgattt 34611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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