View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18937_low_12 (Length: 310)
Name: NF18937_low_12
Description: NF18937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18937_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 5110891 - 5111171
Alignment:
| Q |
12 |
atgaaaggtgtgtatgtatgtacccatcttgaaggaagctactctttcaccagttttgtctgttttgtgctttgtggacactaaaaccctaatgtcttat |
111 |
Q |
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| T |
5110891 |
atgaaaggtgtgtatgtatgtacccatcttgaaggaagctactctttcaccagttttgtttgttttgtgctttgttgacactaaaaccctaatgtcttat |
5110990 |
T |
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| Q |
112 |
tataaagtattgaaacgtgagatgcacggaacaactatattttttgtattaaaacggctaaagctgttttagagttttaataactcaaacccaaaaccca |
211 |
Q |
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| T |
5110991 |
tataaagtattgaaacgtgagatgcacggaacaactatattttttgtattaaaacggctaaagctgttttagagttttaataactcaaacccaaaaccca |
5111090 |
T |
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| Q |
212 |
tttcatgtttacccgacccaactacccaaatcattccttgcaaacaaaacctccacctaaccctagctcgactttcagcaa |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
5111091 |
tttcatgtttacccgacccaactacccaaatcattccttgcaaacaaaacctccgcctaaccctagctcgactttcagcaa |
5111171 |
T |
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