View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18937_low_22 (Length: 235)

Name: NF18937_low_22
Description: NF18937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18937_low_22
NF18937_low_22
[»] chr3 (55 HSPs)
chr3 (36-233)||(43403881-43404078)
chr3 (32-235)||(43401934-43402137)
chr3 (32-235)||(6095731-6095946)
chr3 (32-235)||(49199602-49199818)
chr3 (32-233)||(54593528-54593740)
chr3 (32-233)||(34491036-34491248)
chr3 (32-235)||(4569772-4569988)
chr3 (32-233)||(30235948-30236161)
chr3 (32-235)||(36018672-36018888)
chr3 (32-235)||(47304073-47304287)
chr3 (36-235)||(46860292-46860506)
chr3 (32-235)||(41819655-41819869)
chr3 (68-233)||(55302133-55302310)
chr3 (61-235)||(40913160-40913350)
chr3 (33-235)||(5434010-5434224)
chr3 (39-131)||(31340340-31340432)
chr3 (32-124)||(31314389-31314481)
chr3 (32-124)||(44700610-44700703)
chr3 (33-124)||(29196520-29196612)
chr3 (32-124)||(5236588-5236680)
chr3 (32-124)||(19684021-19684113)
chr3 (32-124)||(40734442-40734534)
chr3 (32-113)||(40735337-40735419)
chr3 (32-124)||(44331489-44331581)
chr3 (64-123)||(46173311-46173370)
chr3 (37-125)||(9666604-9666693)
chr3 (130-233)||(1683311-1683413)
chr3 (36-124)||(22835138-22835226)
chr3 (32-124)||(29810812-29810904)
chr3 (32-124)||(45095109-45095199)
chr3 (36-110)||(26386617-26386692)
chr3 (38-124)||(29682303-29682389)
chr3 (32-113)||(51398768-51398850)
chr3 (36-113)||(53921639-53921717)
chr3 (36-124)||(760791-760879)
chr3 (38-122)||(32891049-32891133)
chr3 (36-124)||(39153497-39153585)
chr3 (32-95)||(7762237-7762301)
chr3 (38-124)||(23392047-23392133)
chr3 (32-124)||(5258276-5258368)
chr3 (32-113)||(16498984-16499066)
chr3 (32-124)||(37408403-37408494)
chr3 (130-213)||(34795712-34795794)
chr3 (32-124)||(5260455-5260547)
chr3 (32-113)||(29813017-29813099)
chr3 (154-212)||(50432840-50432898)
chr3 (36-124)||(9581227-9581314)
chr3 (38-113)||(23410467-23410543)
chr3 (130-182)||(26323318-26323369)
chr3 (32-113)||(9636258-9636340)
chr3 (130-212)||(20937501-20937582)
chr3 (68-120)||(35138874-35138928)
chr3 (32-124)||(23198071-23198161)
chr3 (32-124)||(23200270-23200360)
chr3 (51-128)||(26323224-26323304)
[»] chr1 (61 HSPs)
chr1 (32-235)||(37033205-37033420)
chr1 (32-233)||(13547221-13547434)
chr1 (32-233)||(13549132-13549345)
chr1 (32-233)||(11348521-11348734)
chr1 (32-235)||(193432-193647)
chr1 (32-235)||(37879043-37879258)
chr1 (32-235)||(29136068-29136283)
chr1 (32-235)||(37168118-37168333)
chr1 (32-235)||(47114992-47115207)
chr1 (32-235)||(42298107-42298322)
chr1 (32-233)||(34603399-34603612)
chr1 (32-235)||(19752506-19752722)
chr1 (32-235)||(47255472-47255686)
chr1 (32-235)||(19754312-19754531)
chr1 (32-235)||(7482363-7482577)
chr1 (35-235)||(31925842-31926053)
chr1 (86-235)||(28242209-28242370)
chr1 (130-233)||(34602582-34602684)
chr1 (32-123)||(1833467-1833558)
chr1 (32-133)||(44455095-44455196)
chr1 (32-124)||(197040-197132)
chr1 (32-124)||(3847253-3847345)
chr1 (32-108)||(49918309-49918386)
chr1 (32-124)||(50167307-50167399)
chr1 (36-113)||(4552773-4552851)
chr1 (32-113)||(37503686-37503768)
chr1 (32-124)||(10925167-10925259)
chr1 (32-124)||(28265686-28265778)
chr1 (32-124)||(50169342-50169434)
chr1 (32-95)||(3156837-3156901)
chr1 (35-113)||(31659192-31659271)
chr1 (36-113)||(8550923-8551001)
chr1 (32-124)||(834299-834391)
chr1 (32-124)||(28223553-28223645)
chr1 (36-124)||(41360859-41360946)
chr1 (38-113)||(45644493-45644569)
chr1 (36-122)||(13138111-13138196)
chr1 (51-125)||(44650314-44650389)
chr1 (32-113)||(28220358-28220440)
chr1 (32-113)||(37560001-37560083)
chr1 (37-123)||(40122335-40122421)
chr1 (1-124)||(928078-928202)
chr1 (32-113)||(13659468-13659550)
chr1 (32-124)||(20762616-20762708)
chr1 (36-113)||(46064872-46064950)
chr1 (32-124)||(3189275-3189366)
chr1 (32-124)||(3198092-3198183)
chr1 (32-124)||(3206931-3207022)
chr1 (32-124)||(23555397-23555489)
chr1 (36-126)||(15820249-15820339)
chr1 (32-124)||(30476578-30476672)
chr1 (130-235)||(41135642-41135745)
chr1 (68-131)||(6808382-6808446)
chr1 (137-233)||(16216745-16216839)
chr1 (162-210)||(25651931-25651979)
chr1 (131-234)||(12318725-12318826)
chr1 (51-125)||(44646935-44647010)
chr1 (167-233)||(6808270-6808336)
chr1 (57-101)||(16455588-16455633)
chr1 (197-233)||(4535783-4535819)
chr1 (83-131)||(25652022-25652070)
[»] chr7 (50 HSPs)
chr7 (32-235)||(2361104-2361318)
chr7 (32-233)||(34310848-34311061)
chr7 (36-233)||(6431794-6432003)
chr7 (32-235)||(4508838-4509053)
chr7 (32-229)||(48599466-48599675)
chr7 (32-235)||(4512522-4512737)
chr7 (32-233)||(2390105-2390318)
chr7 (32-235)||(29608557-29608773)
chr7 (32-235)||(4510680-4510895)
chr7 (32-235)||(22269794-22270009)
chr7 (33-235)||(8359450-8359665)
chr7 (61-233)||(6360073-6360257)
chr7 (32-235)||(3258817-3259031)
chr7 (130-235)||(22328641-22328745)
chr7 (32-124)||(47676268-47676360)
chr7 (32-124)||(48491523-48491615)
chr7 (32-113)||(47674075-47674157)
chr7 (32-124)||(8153286-8153378)
chr7 (32-112)||(30024864-30024945)
chr7 (32-124)||(31733101-31733193)
chr7 (1-124)||(36146509-36146633)
chr7 (32-124)||(48489375-48489467)
chr7 (32-124)||(4538672-4538764)
chr7 (32-124)||(4586105-4586197)
chr7 (36-124)||(27347761-27347849)
chr7 (32-113)||(14069965-14070047)
chr7 (32-113)||(14379993-14380075)
chr7 (32-124)||(1113601-1113693)
chr7 (32-124)||(12097991-12098083)
chr7 (36-124)||(24526033-24526121)
chr7 (32-124)||(38671354-38671446)
chr7 (32-124)||(43864188-43864280)
chr7 (37-124)||(2761439-2761526)
chr7 (32-123)||(26417261-26417352)
chr7 (32-124)||(18126588-18126680)
chr7 (37-113)||(31105530-31105607)
chr7 (32-124)||(35853859-35853950)
chr7 (32-124)||(41317566-41317658)
chr7 (36-110)||(31518752-31518827)
chr7 (32-124)||(4178719-4178810)
chr7 (38-124)||(48408747-48408832)
chr7 (32-126)||(23554982-23555076)
chr7 (32-124)||(29990999-29991089)
chr7 (36-124)||(41649146-41649234)
chr7 (33-124)||(4253663-4253754)
chr7 (34-123)||(496117-496206)
chr7 (51-124)||(24514912-24514984)
chr7 (140-234)||(43363667-43363759)
chr7 (1-108)||(23343934-23344041)
chr7 (36-118)||(23565198-23565280)
[»] chr5 (38 HSPs)
chr5 (32-235)||(40147082-40147297)
chr5 (32-235)||(213290-213501)
chr5 (32-233)||(5057870-5058083)
chr5 (32-235)||(27015353-27015567)
chr5 (32-235)||(28278137-28278352)
chr5 (32-235)||(38746826-38747041)
chr5 (32-235)||(27637745-27637963)
chr5 (32-123)||(42426367-42426458)
chr5 (130-224)||(4160465-4160558)
chr5 (32-124)||(533713-533805)
chr5 (32-124)||(28750787-28750879)
chr5 (37-124)||(5887553-5887640)
chr5 (32-124)||(39468681-39468773)
chr5 (33-113)||(42428563-42428644)
chr5 (36-113)||(8566082-8566160)
chr5 (32-113)||(13488157-13488239)
chr5 (32-113)||(32636778-32636860)
chr5 (51-211)||(16641091-16641263)
chr5 (36-124)||(19806328-19806415)
chr5 (32-124)||(25412706-25412796)
chr5 (36-124)||(31182917-31183004)
chr5 (32-123)||(537970-538061)
chr5 (32-124)||(13343005-13343097)
chr5 (36-113)||(33831634-33831712)
chr5 (147-209)||(33906289-33906350)
chr5 (40-113)||(42310075-42310149)
chr5 (36-124)||(3075794-3075882)
chr5 (33-124)||(13239696-13239786)
chr5 (32-124)||(30182533-30182624)
chr5 (33-113)||(30683054-30683134)
chr5 (49-123)||(9049490-9049565)
chr5 (57-123)||(42926838-42926904)
chr5 (130-212)||(316609-316688)
chr5 (51-124)||(36074196-36074268)
chr5 (130-235)||(21205895-21205999)
chr5 (57-124)||(37439078-37439144)
chr5 (130-212)||(14689653-14689734)
chr5 (38-113)||(16452035-16452110)
[»] chr6 (26 HSPs)
chr6 (32-235)||(17762810-17763026)
chr6 (36-235)||(5043448-5043659)
chr6 (32-233)||(21593489-21593700)
chr6 (32-235)||(3808841-3809055)
chr6 (36-235)||(2973075-2973286)
chr6 (57-235)||(603237-603427)
chr6 (32-235)||(26830255-26830471)
chr6 (32-234)||(22424959-22425171)
chr6 (147-235)||(17757905-17757993)
chr6 (32-124)||(9183163-9183255)
chr6 (32-124)||(3039035-3039127)
chr6 (32-124)||(28137540-28137632)
chr6 (1-126)||(4045364-4045489)
chr6 (32-124)||(5406332-5406422)
chr6 (32-124)||(5410657-5410747)
chr6 (137-218)||(5741040-5741120)
chr6 (32-86)||(21588913-21588967)
chr6 (32-124)||(2171663-2171754)
chr6 (32-124)||(5413526-5413616)
chr6 (32-96)||(17757994-17758059)
chr6 (32-124)||(33211317-33211409)
chr6 (32-113)||(16452461-16452543)
chr6 (193-235)||(26800591-26800633)
chr6 (32-113)||(31404807-31404887)
chr6 (32-124)||(26954418-26954509)
chr6 (32-95)||(30834668-30834733)
[»] chr4 (64 HSPs)
chr4 (36-235)||(50673982-50674193)
chr4 (32-235)||(54882841-54883056)
chr4 (32-235)||(41964236-41964451)
chr4 (36-233)||(12073215-12073424)
chr4 (32-235)||(8665228-8665444)
chr4 (32-235)||(6655777-6655992)
chr4 (36-235)||(379200-379412)
chr4 (32-233)||(35662265-35662477)
chr4 (33-189)||(2209580-2209748)
chr4 (32-235)||(8647959-8648175)
chr4 (32-235)||(55085497-55085712)
chr4 (32-229)||(46703327-46703536)
chr4 (66-235)||(50262864-50263045)
chr4 (130-235)||(26364086-26364191)
chr4 (32-131)||(40632382-40632481)
chr4 (32-130)||(21688186-21688285)
chr4 (32-131)||(41639363-41639462)
chr4 (32-200)||(27417097-27417273)
chr4 (162-235)||(40630805-40630878)
chr4 (33-234)||(12119361-12119573)
chr4 (130-235)||(33989683-33989787)
chr4 (36-122)||(31474096-31474182)
chr4 (32-113)||(48893774-48893856)
chr4 (32-124)||(52095494-52095586)
chr4 (32-124)||(54200038-54200130)
chr4 (33-124)||(5429623-5429714)
chr4 (32-124)||(41639207-41639299)
chr4 (32-124)||(26175768-26175860)
chr4 (32-124)||(52082789-52082881)
chr4 (34-124)||(37229857-37229947)
chr4 (32-113)||(36994478-36994560)
chr4 (36-124)||(5871764-5871852)
chr4 (36-124)||(13009567-13009655)
chr4 (32-124)||(47038542-47038633)
chr4 (36-124)||(52467490-52467579)
chr4 (32-123)||(12745568-12745659)
chr4 (35-126)||(36463524-36463615)
chr4 (32-124)||(9927590-9927681)
chr4 (32-124)||(12739682-12739774)
chr4 (32-124)||(12747888-12747980)
chr4 (53-125)||(26699598-26699671)
chr4 (32-124)||(29254438-29254530)
chr4 (32-124)||(34570546-34570638)
chr4 (158-235)||(46569816-46569893)
chr4 (32-124)||(56178769-56178860)
chr4 (37-124)||(24969055-24969143)
chr4 (38-113)||(51337018-51337094)
chr4 (130-233)||(34112435-34112537)
chr4 (32-124)||(48142986-48143079)
chr4 (37-107)||(3913408-3913479)
chr4 (32-79)||(26364225-26364272)
chr4 (32-124)||(37740570-37740661)
chr4 (130-203)||(41961264-41961336)
chr4 (36-124)||(45687319-45687407)
chr4 (38-124)||(4587902-4587988)
chr4 (33-123)||(5207976-5208066)
chr4 (57-122)||(5370244-5370308)
chr4 (51-124)||(6542332-6542405)
chr4 (32-113)||(29999939-30000019)
chr4 (33-126)||(48142512-48142605)
chr4 (130-233)||(33089722-33089813)
chr4 (130-221)||(3785926-3786015)
chr4 (32-79)||(46147523-46147570)
chr4 (49-124)||(29056301-29056377)
[»] chr2 (39 HSPs)
chr2 (36-235)||(1631868-1632079)
chr2 (32-235)||(42288242-42288457)
chr2 (32-235)||(35447016-35447231)
chr2 (32-235)||(45726750-45726965)
chr2 (57-233)||(24397881-24398066)
chr2 (32-124)||(29867813-29867905)
chr2 (32-124)||(34139903-34139995)
chr2 (36-235)||(17450411-17450623)
chr2 (33-124)||(13121712-13121803)
chr2 (32-113)||(17057501-17057583)
chr2 (32-113)||(17085484-17085566)
chr2 (32-113)||(36318141-36318223)
chr2 (36-124)||(11690445-11690533)
chr2 (32-124)||(36773506-36773598)
chr2 (32-124)||(38312184-38312276)
chr2 (32-124)||(39284829-39284921)
chr2 (36-124)||(42362296-42362384)
chr2 (32-126)||(33162582-33162676)
chr2 (32-124)||(2334550-2334641)
chr2 (36-124)||(14633962-14634050)
chr2 (37-124)||(11151728-11151815)
chr2 (36-124)||(723880-723968)
chr2 (36-124)||(5723392-5723478)
chr2 (32-124)||(11067249-11067341)
chr2 (36-124)||(24885605-24885693)
chr2 (49-124)||(5700271-5700347)
chr2 (32-124)||(45099699-45099791)
chr2 (32-124)||(36205796-36205887)
chr2 (33-124)||(7815407-7815498)
chr2 (33-124)||(11049493-11049584)
chr2 (32-114)||(6595138-6595221)
chr2 (32-124)||(12123717-12123809)
chr2 (152-233)||(33647993-33648074)
chr2 (32-124)||(36988208-36988299)
chr2 (32-124)||(4503264-4503356)
chr2 (198-233)||(7451123-7451158)
chr2 (32-124)||(30833290-30833381)
chr2 (152-213)||(43730991-43731051)
chr2 (39-126)||(17490283-17490368)
[»] chr8 (44 HSPs)
chr8 (32-235)||(4283345-4283560)
chr8 (36-235)||(40328600-40328811)
chr8 (32-235)||(42435123-42435338)
chr8 (32-235)||(40221566-40221781)
chr8 (32-235)||(11383807-11384021)
chr8 (32-233)||(44353615-44353829)
chr8 (32-211)||(18655246-18655436)
chr8 (32-125)||(10930331-10930424)
chr8 (32-124)||(15212730-15212822)
chr8 (32-124)||(4731602-4731694)
chr8 (36-124)||(18141764-18141853)
chr8 (36-124)||(30291549-30291638)
chr8 (32-124)||(43036367-43036459)
chr8 (32-126)||(1345503-1345597)
chr8 (32-113)||(27811232-27811314)
chr8 (33-122)||(8965825-8965914)
chr8 (32-124)||(33352094-33352186)
chr8 (32-126)||(40321022-40321116)
chr8 (32-124)||(9765693-9765781)
chr8 (36-124)||(19491835-19491922)
chr8 (32-124)||(30143286-30143376)
chr8 (38-124)||(6598916-6599002)
chr8 (38-124)||(6674369-6674455)
chr8 (33-124)||(8153705-8153798)
chr8 (38-124)||(1292601-1292687)
chr8 (38-124)||(3303808-3303894)
chr8 (42-124)||(4743345-4743427)
chr8 (130-221)||(40585561-40585650)
chr8 (32-124)||(17982597-17982689)
chr8 (32-113)||(34254463-34254543)
chr8 (38-123)||(41366752-41366837)
chr8 (38-126)||(5689213-5689301)
chr8 (32-124)||(31218201-31218293)
chr8 (51-124)||(1746370-1746442)
chr8 (167-233)||(9633816-9633882)
chr8 (51-124)||(12702790-12702862)
chr8 (32-93)||(34256639-34256700)
chr8 (51-124)||(44303798-44303870)
chr8 (131-212)||(33655548-33655628)
chr8 (36-124)||(41364983-41365071)
chr8 (36-95)||(3772164-3772224)
chr8 (51-113)||(19945512-19945574)
chr8 (32-112)||(42498149-42498230)
chr8 (57-124)||(18106235-18106302)
[»] scaffold0466 (1 HSPs)
scaffold0466 (32-233)||(7151-7363)
[»] scaffold0014 (1 HSPs)
scaffold0014 (32-235)||(80415-80630)
[»] scaffold0176 (1 HSPs)
scaffold0176 (32-233)||(18135-18346)
[»] scaffold0286 (1 HSPs)
scaffold0286 (32-235)||(11379-11593)
[»] scaffold0016 (1 HSPs)
scaffold0016 (32-124)||(114547-114638)
[»] scaffold0006 (1 HSPs)
scaffold0006 (32-113)||(149229-149311)
[»] scaffold0066 (1 HSPs)
scaffold0066 (36-113)||(20551-20629)
[»] scaffold0002 (1 HSPs)
scaffold0002 (32-95)||(434504-434569)
[»] scaffold0197 (1 HSPs)
scaffold0197 (148-211)||(1667-1729)
[»] scaffold1519 (1 HSPs)
scaffold1519 (32-124)||(861-952)
[»] scaffold0053 (1 HSPs)
scaffold0053 (88-120)||(25000-25032)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 36 - 233
Target Start/End: Original strand, 43403881 - 43404078
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaaaaga 135  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43403881 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaagtgtttacaattgtttcccaactttagaaaaga 43403980  T
Q  136 gaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||| ||||||||||||||||||||    
T  43403981 gaaccaacccatagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcccaaatgactctccactcatgtgttt 43404078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 43401934 - 43402137
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  43401934 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaatcgtttcccaactctagaa 43402033  T
Q  132 aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgt 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | |||||||||| ||||||| || |||||||||||||||    
T  43402034 aagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagacttacccaagttgttcacaaatgattctccactcatgtgt 43402133  T
Q  232 ttcc 235  Q
    ||||    
T  43402134 ttcc 43402137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 6095731 - 6095946
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6095731 caaccctaatttctactcattttcccaatctcaccaatgaataagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 6095830  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  6095831 tctaacccccaaaagagaaccaacctttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 6095930  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  6095931 ccactcatgtgtttcc 6095946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 49199602 - 49199818
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    ||||| |||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      
T  49199602 caaccttaatttctacccattttcccaatctcaccaacgaacaagacactcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 49199701  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattc-acccaagttgctcacaaaagactc 218  Q
              |||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  49199702 tctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaaagactc 49199801  T
Q  219 tccactcatgtgtttcc 235  Q
    ||||||||| |||||||    
T  49199802 tccactcatatgtttcc 49199818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 54593740 - 54593528
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  54593740 caaccctaatttctgcacattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 54593641  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||    
T  54593640 tctaacccccaaaagagaa-caacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagactct 54593542  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  54593541 ccactcatgtgttt 54593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 34491248 - 34491036
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| |||||||||||||||| || ||| ||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  34491248 caaccctaatttctacccattttcccaatctcaccaatgaataacacactca-gaatttcactctcccaaggtgtttacaattgtttcccaactctagaa 34491150  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  34491149 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 34491050  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  34491049 ccactcatgtgttt 34491036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 4569988 - 4569772
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| |||||||||||| |||||| ||| ||| |||||||||||| ||||| |||||||||||||||| |||||||||||    
T  4569988 caaccctaatttctacccattttcccaatctcaccaaagaacaaaacactcaatgattttcactcacccaaggtgtttacaattgttttccaactctaga 4569889  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  4569888 atctaaccaccaaaagagaaccaacccttagcctttgatttcactaaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaagactc 4569789  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  4569788 tccactcatgtgtttcc 4569772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 30236161 - 30235948
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||      
T  30236161 caaccctaatttctacccattttcccaatctcatcaatgaacaagacactcatgattttcactatcccaaggtgtttacaattgtttcccaactctagaa 30236062  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              ||||||||||||| |  |||| || ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||    
T  30236061 tctaacccccaaaagagaaccaatcattagccttcgatttcactaaggatcttctcttttggtttcacaagactcacccaacttgctcacaaatgactct 30235962  T
Q  220 ccactcatgtgttt 233  Q
    |||||| |||||||    
T  30235961 ccactcttgtgttt 30235948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 36018888 - 36018672
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    ||||||||||||| || ||||||| |||| ||||||||||||||| || || | | ||||||||||||||| ||||||||||||||||||||||||||||    
T  36018888 caaccctaatttcaacccattttcccaatttcaccaatgaacaagtcactcgttaattttcactctcccaaggtgtttacaattgtttcccaactctaga 36018789  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  36018788 atctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactc 36018689  T
Q  219 tccactcatgtgtttcc 235  Q
    |||| ||||||||||||    
T  36018688 tccattcatgtgtttcc 36018672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 47304287 - 47304073
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  47304287 caaccataatttctacccattttctcaatctcacaaatgaacaagacactcatgattttcactctcccagggtgtttaaaattgttttccaactctagaa 47304188  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||| | ||||| ||||||||||||||| |||||    
T  47304187 tctaacccccaaaagagaaccaacccttagtttttgatttcactaaggatattctcttttggttttacaagactcacctaagttgctcacaaaa-actct 47304089  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  47304088 ccactcatgtgtttcc 47304073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 46860506 - 46860292
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcat--gattttcactctcccaaagtgtttacaattgtttcccaactctag---- 129  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||   |||||||||||||||| ||||||||||||||||| |||||||||        
T  46860506 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaactctagaatc 46860407  T
Q  130 --------aaaagagaaccaacc--catagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
            |||||||||||||||  | |||  ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  46860406 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 46860308  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  46860307 ccactcatgtgtttcc 46860292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 41819655 - 41819869
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||     
T  41819655 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattatttcccaactctaga 41819754  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
               |||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||| || | |||| ||||||||||||||| || ||    
T  41819755 atctaaccgctaaaagagaaccaacccttagc-tttgatttca-taaagatcttctcttttggtttcataagactcactcaagttgctcacaaatgagtc 41819852  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  41819853 tccactcatgtgtttcc 41819869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 55302133 - 55302310
Alignment:
Q  68 atgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacccatagcttttg 155  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| ||            |||||||||||||| |||| ||||    
T  55302133 atgaacaagacactcatgattttcactctcccaaggtatttacaattgtttcccaactctataatctaacctacaaaagagaaccaacccctagcctttg 55302232  T
Q  156 atttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||    
T  55302233 atttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttt 55302310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 40913350 - 40913160
Alignment:
Q  61 ctcaccaatgaacaagacattcatgattttcac----tctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacc 144  Q
    ||||||||||||||||||| |||| ||||||||    |||||||| |||||||||||||||||||||||||||||            |||||||||||||    
T  40913350 ctcaccaatgaacaagacactcataattttcacgtactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacc 40913251  T
Q  145 catagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    | || | ||| ||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||| ||||||||||||||||||||||    
T  40913250 cttaacctttaatttcactaaggatcttctcttttgctttcacaagactcacccaatttgctcacaaatgactctccactcatgtgtttcc 40913160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 235
Target Start/End: Original strand, 5434010 - 5434224
Alignment:
Q  33 aaccctaatttctacgcattttctc--aatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctag 129  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||||||||     
T  5434010 aaccctaatttctac-cattttctcccaatctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaattgtttcccaactctat 5434107  T
Q  130 aa------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagact 217  Q
    ||            ||||||| ||| |  |||  ||||||| || ||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  5434108 aatctaacccccaaaagagaatcaatctttagtctttgattaca-taaggatcttctcttttggtttcccaagactcacccaacttgctcacaaaagact 5434206  T
Q  218 ctccactcatgtgtttcc 235  Q
    ||||||||||||||||||    
T  5434207 ctccactcatgtgtttcc 5434224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 31340340 - 31340432
Alignment:
Q  39 aatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31340340 aatttctaccaattttcccaatctcaccaatgaacaaaacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 31340432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 31314481 - 31314389
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||    
T  31314481 caaccctaatttctacccattttctcaatctcacctatgaacaagacactcaatgattttcactcacccaaagtgtttacaa-tgtttcccaac 31314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 44700610 - 44700703
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  44700610 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 44700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 29196520 - 29196612
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  29196520 aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 29196612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5236588 - 5236680
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  5236588 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5236680  T

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Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 19684021 - 19684113
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  19684021 caaccctaatttctacccattttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 19684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 40734534 - 40734442
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  40734534 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 40734442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 40735419 - 40735337
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||| | |||| |||||||||||    
T  40735419 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttacaat 40735337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 44331581 - 44331489
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  44331581 caaccctaatttctacccattttcctaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 44331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 46173370 - 46173311
Alignment:
Q  64 accaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  46173370 accaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaa 46173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 9666604 - 9666693
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaact 125  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  9666604 ctaatttctacccatttttccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaact 9666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 1683413 - 1683311
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||| ||||||||| |||| ||||||||  ||||||||||||||||||||| |||||| | ||||| |||||||||| ||| || | |||||||||||    
T  1683413 aaaagataaccaacccttagcctttgatttt-ctaaggatcttctcttttggtctcacaagactcaccaaagttgctcataaatgattatccactcatgt 1683315  T
Q  230 gttt 233  Q
    ||||    
T  1683314 gttt 1683311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 22835138 - 22835226
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||||||||    
T  22835138 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgattacaa-tgtttcccaac 22835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29810904 - 29810812
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| |||||||||||  ||||||  ||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  29810904 caactctaatttctacatattttcctaatctcaccaatgaataagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 45095199 - 45095109
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  45095199 caaccctaatttctac-cattttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 45095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 26386617 - 26386692
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttac 110  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| |||||||| |||||    
T  26386617 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaagtatttac 26386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 29682389 - 29682303
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| ||||||| ||||||||| ||| ||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  29682389 taatttctacccattttcccaatctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29682303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 51398850 - 51398768
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||  |||||||| |||||||||||||| || |||||||||||||  |||| |||||||||||    
T  51398850 caaccctaatttctacccatttttccaatctcatcaatgaacaagacactcaatgattttcactcatccaaggtgtttacaat 51398768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 53921639 - 53921717
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| || ||||||||    
T  53921639 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtttttacaat 53921717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 760879 - 760791
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || |||||||||||||  |||| ||||||| || |||||||||||    
T  760879 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcatccaaggtgtttataa-tgtttcccaac 760791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 32891133 - 32891049
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttccca 122  Q
    |||||||||| |||||||||||||||||| | |||||||||| || |||||||| |||| ||||| |||||||||| |||||||||    
T  32891133 taatttctacccattttctcaatctcaccgaagaacaagacactcaatgatttttactcacccaaggtgtttacaa-tgtttccca 32891049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 39153497 - 39153585
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| |||||||||  |||||||||||| || |||||||||| || ||||| |||||||||| |||||||||||    
T  39153497 cctaatttctacccattttcccaatctcacacatgaacaagacactcaatgattttcattcacccaaggtgtttacaa-tgtttcccaac 39153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 7762301 - 7762237
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactc 95  Q
    |||||||||||||||| | |||||||||||||||||||||| |||||| || |||||||||||||    
T  7762301 caaccctaatttctaccctttttctcaatctcaccaatgaataagacactcaatgattttcactc 7762237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 23392047 - 23392133
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| ||||||| ||| |||||||||||| |||||| |  ||||||||||||| ||||| |||||||||| |||||||||||    
T  23392047 taatttctactcattttcccaaactcaccaatgaaaaagacactaaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 23392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5258276 - 5258368
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5258276 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 16499066 - 16498984
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||  | ||||| ||||||||| ||||||||||||| || ||||||||||||  ||||| |||||||||||    
T  16499066 caaccctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaat 16498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 37408494 - 37408403
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || || ||||||||||  | || |||||||||| |||||||||||    
T  37408494 caaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaataattttcactc-actaaggtgtttacaa-tgtttcccaac 37408403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 34795794 - 34795712
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaa 213  Q
    |||||||||||| ||| |||| ||||||||  ||||||||||||||||||||| || ||| | ||||||||||| || ||||||    
T  34795794 aaaagagaaccatcccttagcctttgatttt-ctaaggatcttctcttttggtctcccaagactcacccaagtttcttacaaaa 34795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5260455 - 5260547
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| | ||||||||||||||| ||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5260455 caaccctaatttctacccttttttcccaatctcaccaatgaccaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5260547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 29813099 - 29813017
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||||||||||||||  |||||  ||||||||||||| |||||| |  || ||||||||||||| ||||| |||||||||||    
T  29813099 caaccctaatttctacctatttttccaatctcaccaattaacaagcccctcaatgattttcactcacccaatgtgtttacaat 29813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 50432840 - 50432898
Alignment:
Q  154 tgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaa 212  Q
    |||||||||||||||||| || ||||||| || ||| ||||| ||||||||||||||||    
T  50432840 tgatttcactaaggatctccttttttggtctctcaagattcaaccaagttgctcacaaa 50432898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 9581314 - 9581227
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||| |  |||| ||| ||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  9581314 cctaatttctacccatttccg-aatcccacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 9581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 23410467 - 23410543
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||| |||||||  ||| |||| ||||||||||||| || ||||||||||||| | ||| |||||||||||    
T  23410467 taatttctacccattttccaaatttcactaatgaacaagacactcaatgattttcactcactcaaggtgtttacaat 23410543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 26323318 - 26323369
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggt 182  Q
    |||||||||||||||| |||||||||||||| |||||||| |||| |||||||    
T  26323318 aaaagagaaccaacccttagcttttgatttc-ctaaggatattcttttttggt 26323369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 9636258 - 9636340
Alignment:
Q  32 caaccctaatttctacgcattt-tctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | ||| || ||||||||||||||| ||||||| || |||||||||||||  |||| |||||||||||    
T  9636258 caaccctaatttctacccttttctcccaatctcaccaatgaccaagacactcaatgattttcactc-accaaggtgtttacaat 9636340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 20937582 - 20937501
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaa 212  Q
    |||||||||||||||  || | ||||||||| ||||| ||||||||||||||| || ||| | |||||||||||  |||||||    
T  20937582 aaaagagaaccaacctttatcctttgatttc-ctaagaatcttctcttttggtctcccaagaatcacccaagtttgtcacaaa 20937501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 35138874 - 35138928
Alignment:
Q  68 atgaacaagacattca-tgattttcactctcccaaagtgttt-acaattgtttcc 120  Q
    |||||||||||| ||| |||||||||||||||||| |||||| ||||||||||||    
T  35138874 atgaacaagacactcaatgattttcactctcccaaggtgtttcacaattgtttcc 35138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 23198071 - 23198161
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| |||||||||||   ||||| |||||||||||| |||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  23198071 caactctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 23198161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 23200270 - 23200360
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| |||||||||||   ||||| |||||||||||| |||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  23200270 caactctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 23200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 26323224 - 26323304
Alignment:
Q  51 ttttctcaatctca-ccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttac-aattgtttcccaactcta 128  Q
    |||||||||||||| || |||||||||||| || ||||| ||||||| | ||| |||||| | ||||||||||||||||||    
T  26323224 ttttctcaatctcatcccatgaacaagacacttaatgatgttcactcactcaaggtgtttcccaattgtttcccaactcta 26323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 37033205 - 37033420
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37033205 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 37033304  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  37033305 tctaaccccaaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 37033404  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  37033405 ccactcatgtgtttcc 37033420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 13547221 - 13547434
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  13547221 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaaatctagaa 13547320  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13547321 tctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactct 13547420  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  13547421 ccactcatgtgttt 13547434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 13549132 - 13549345
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  13549132 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaaatctagaa 13549231  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13549232 tctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactct 13549331  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  13549332 ccactcatgtgttt 13549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 11348734 - 11348521
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11348734 caaccctaatttctaccaattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 11348635  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  11348634 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 11348535  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  11348534 ccactcatgtgttt 11348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 193647 - 193432
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  193647 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcatgattttcaccctcccaaggtgtttacaattgtttcccaactctagaa 193548  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  193547 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaaagactct 193448  T
Q  220 ccactcatgtgtttcc 235  Q
     ||| |||||||||||    
T  193447 tcacacatgtgtttcc 193432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 37879043 - 37879258
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37879043 caaccctaatttctacctattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 37879142  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                ||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  37879143 tctaacccccaaaagagaaccaatccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactct 37879242  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  37879243 ccactcatgtgtttcc 37879258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 29136283 - 29136068
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||      
T  29136283 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcacaactctagaa 29136184  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  29136183 tctaacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaaaactct 29136084  T
Q  220 ccactcatgtgtttcc 235  Q
    |||||||||| |||||    
T  29136083 ccactcatgtttttcc 29136068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 37168333 - 37168118
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||      
T  37168333 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctctcaaggtgtttacaattgtttcccaactctagaa 37168234  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              ||||||||| |||||  |||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  37168233 tctaacccccaaaagagaatcaacctttagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaagactct 37168134  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  37168133 ccactcatgtgtttcc 37168118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 47115207 - 47114992
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  47115207 caaccctaatttctaccaattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaagatgtttacaattgtttcccaactctagaa 47115108  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  47115107 tctaacccccaaaagagaaccaacccttagcctttgatttcattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 47115008  T
Q  220 ccactcatgtgtttcc 235  Q
    ||| ||||||||||||    
T  47115007 ccattcatgtgtttcc 47114992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 42298107 - 42298322
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  42298107 caaccctaatttctaccaattttcccaatctcaccaatgaacaagacactcatgatttttactctcccaaggtgtttacaattgtttcacaactctagaa 42298206  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  42298207 tctaacccccaaaagagaaccaactcttagcctttgatttcacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactct 42298306  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  42298307 ccactcatgtgtttcc 42298322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 34603612 - 34603399
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||||     
T  34603612 caaccctaatttctacccattttttcaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctaga 34603513  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
               |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||     
T  34603512 atctaacctccaaaagagaaccaacccttagcctttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactt 34603414  T
Q  219 tccactcatgtgttt 233  Q
    | |||||||||||||    
T  34603413 ttcactcatgtgttt 34603399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 19752722 - 19752506
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  19752722 caaccctaatttctacccattttactcaatctcaccaatgaacaagacactcatgattttcactctctcaaggtgtttacgattatttcccaactctaga 19752623  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            ||||||||||| |  |||| |||||||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||| ||||    
T  19752622 atctaacccccaaaagagaaccaatcattagcctttgatttcactaaggatcttctcttttggtttcacaagactcatctaagttgctcacaaaatactc 19752523  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  19752522 tccactcatgtgtttcc 19752506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 47255472 - 47255686
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |  ||||||||| ||||||||||||||||    
T  47255472 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcatgattttcactctcccaaggcatttacaattatttcccaactctagaa 47255571  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||    
T  47255572 tctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttctcttttggtttcacaagactca-ctaagttgctcacaaaagactct 47255670  T
Q  220 ccactcatgtgtttcc 235  Q
    ||| ||||||||||||    
T  47255671 ccaatcatgtgtttcc 47255686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 19754531 - 19754312
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||     
T  19754531 caaccctaatttctacccatttttctcaatctcaccaatgaacaagacactcatgattttcactctctcaaggtgtttacgaatgtttcccaactctaga 19754432  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcac---taaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaaga 215  Q
               |||||||||||||||  || | |||||||||||   ||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  19754431 atctaacccccaaaagagaaccaaccattatcctttgatttcacttataaggattttctcttttggtttcacaagactcacccaagttgctcacaaaaga 19754332  T
Q  216 ctctccactcatgtgtttcc 235  Q
    ||||||||||||||||||||    
T  19754331 ctctccactcatgtgtttcc 19754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 7482363 - 7482577
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||    
T  7482363 caaccctaatttctacccatttacccaatctcaccaatgaacaatacactcatgaattttcactttcccaaggtgtttacaattgcttcccaactctaga 7482462  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  7482463 atctaacccccaaaagagaaccaacccttagcttt-gatttc-ctaaggatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactc 7482560  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  7482561 tccactcatgtgtttcc 7482577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 31925842 - 31926053
Alignment:
Q  35 ccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa--- 131  Q
    ||||||||||||| ||||||  || |||||||||||||||||||| ||||||||||||||||||||| |||||||||| || |||| ||||||||||       
T  31925842 ccctaatttctacccatttttccactctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaactgcttcc-aactctagaatct 31925940  T
Q  132 ---------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctcca 222  Q
             |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||    
T  31925941 aacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaaagattctcca 31926040  T
Q  223 ctcatgtgtttcc 235  Q
    |||| ||||||||    
T  31926041 ctcacgtgtttcc 31926053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 28242370 - 28242209
Alignment:
Q  86 attttcactctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacccatagcttttgatttcactaaggatcttc 173  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||            ||||||||||||||||||| |||||||||||||||||| |||    
T  28242370 attttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccctaaaagagaaccaacccatagcctttgatttcactaaggatattc 28242271  T
Q  174 tcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  28242270 tcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcc 28242209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 34602582 - 34602684
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||||    
T  34602582 aaaagagaaccaacccttagcctttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttttcactcatgt 34602680  T
Q  230 gttt 233  Q
    ||||    
T  34602681 gttt 34602684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 1833558 - 1833467
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| ||||||||||    
T  1833558 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 1833467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 44455196 - 44455095
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||| ||||||||| ||||| |||||||||| ||||||||||| | |||    
T  44455196 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatggttttcactcacccaaggtgtttacaa-tgtttcccaacccaaga 44455098  T
Q  131 aaa 133  Q
    |||    
T  44455097 aaa 44455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 197040 - 197132
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  197040 caaccctaatttctaccaattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 197132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 3847253 - 3847345
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  3847253 caaccctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 3847345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 49918386 - 49918309
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgttt 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||    
T  49918386 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 50167307 - 50167399
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  50167307 caaccctaatttctactaattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 50167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 4552773 - 4552851
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| ||||| |||||||||||    
T  4552773 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttccctcacccaaggtgtttacaat 4552851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 37503686 - 37503768
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  37503686 caaccctaatttttacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 37503768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 10925259 - 10925167
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  10925259 caaccataatttctatccattttttcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 10925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28265686 - 28265778
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  28265686 caaccctaatttctacctattttcccaatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 28265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 50169342 - 50169434
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| || ||||||| |||||||||||    
T  50169342 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtatttacaa-tgtttcccaac 50169434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 3156901 - 3156837
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactc 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  3156901 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactc 3156837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 31659271 - 31659192
Alignment:
Q  35 ccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  31659271 ccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 31659192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 8550923 - 8551001
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  8550923 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaatgtgtttacaat 8551001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 834299 - 834391
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||||||| || ||||||||||| | ||||| |||||||||| |||||||||||    
T  834299 caaccctaatttctatccattttcccaatctcacaaatgaacaagacactcaatgattttcacgcacccaaggtgtttacaa-tgtttcccaac 834391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28223553 - 28223645
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||| | ||| |||||||||||    
T  28223553 caaccataatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtcttcaa-tgtttcccaac 28223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 41360946 - 41360859
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||  |||||||||| |||||  ||||||| | |||||||||||    
T  41360946 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatattttcactcacccaagatgtttacga-tgtttcccaac 41360859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 45644493 - 45644569
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||| |||||  ||||||||||    
T  45644493 taatttctatccattttctcaatctcaccaatgaacaagacacttaatgattttcactcacccaagatgtttacaat 45644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 13138111 - 13138196
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttccca 122  Q
    |||||||||||  |||||| |||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||    
T  13138111 cctaatttctatccatttt-tcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttccca 13138196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 44650314 - 44650389
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaact 125  Q
    ||||||||||||| ||||||||||||||| ||| | |||||||||| |||||||||||||||| ||||| ||||||    
T  44650314 ttttctcaatctctccaatgaacaagacactcaataattttcactcacccaaagtgtttacaaatgttttccaact 44650389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 28220358 - 28220440
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||| || ||||||||||||| ||||| |||||| ||||    
T  28220358 caaccctaatttctacccattttccgaatctcaccaatgaataagacactcaatgattttcactcacccaaggtgttttcaat 28220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 37560001 - 37560083
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||| || ||||||||||||| || || |||||||||||    
T  37560001 caactctaatttctacccattttcctaatctcaccaatgaacaagacactcaatgattttcactcacctaatgtgtttacaat 37560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 40122335 - 40122421
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||| || ||||||  ||||||||| |||||||||||||||| |||||||| |||| ||||| |||||||||| ||||||||||    
T  40122335 ctaatttcgacccatttttccaatctcacaaatgaacaagacattcaatgatttttactcacccaaggtgtttacaa-tgtttcccaa 40122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 928078 - 928202
Alignment:
Q  1 agaaattagcttcaacaagctcnnnnnnnnncaaccctaatttctacgcattttctc-aatctcaccaatgaacaagacattcat-gattttcactctcc 98  Q
    ||||||||||||||||||||||          ||||||||||||||  |||||| || ||| ||||||| |||||||||| |||| ||||||||||| ||    
T  928078 agaaattagcttcaacaagctcacaaagaacaaaccctaatttctat-cattttttccaatatcaccaaagaacaagacactcattgattttcactcacc 928176  T
Q  99 caaagtgtttacaattgtttcccaac 124  Q
    ||| |||||||||| |||||||||||    
T  928177 caaggtgtttacaaatgtttcccaac 928202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 13659468 - 13659550
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||  | ||||| ||||||||| ||||||||||||| || ||||||||||||  ||||| |||||||||||    
T  13659468 caaccctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaat 13659550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 20762708 - 20762616
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||| | || |||||||||||||  |||| |||||||||| |||||||||||    
T  20762708 caaccctaatttctacccttttttctcaatctcaccaatgaacaagatactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 20762616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 46064950 - 46064872
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||| ||  ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  46064950 cctaatttttatccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 46064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 3189366 - 3189275
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| | |||||  |||||||||||||||||||||| ||| ||||||||||||  |||| |||||||||| |||||||||||    
T  3189366 caaccctaatttataccctttttccaaatctcaccaatgaacaagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 3198183 - 3198092
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| | |||||  |||||||||||||||||||||| ||| ||||||||||||  |||| |||||||||| |||||||||||    
T  3198183 caaccctaatttataccctttttccaaatctcaccaatgaacaagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3198092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 3207022 - 3206931
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| | |||||  |||||||||||||||||||||| ||| ||||||||||||  |||| |||||||||| |||||||||||    
T  3207022 caaccctaatttataccctttttccaaatctcaccaatgaacaagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 3206931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 23555397 - 23555489
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||  |||||||||||| ||| |||||| || || ||||||| || ||||| |||||||||| |||||||||||    
T  23555397 caaccctaatttctacccatttttccaatctcaccaaagaataagacactcaataattttcattcacccaaggtgtttacaa-tgtttcccaac 23555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 15820339 - 15820249
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||| ||| ||| ||  |||| ||||||| |||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  15820339 cctaatttttacccatctttccaatatcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaactc 15820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 30476578 - 30476672
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaa---tgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| ||||||||||||   |||||||||  |  ||||||||||| | ||||| |||||||||| |||||||||||    
T  30476578 caaccctaatttctacctattttcccaatctcaccaatattgaacaagaactcaatgattttcacccacccaaggtgtttacaa-tgtttcccaac 30476672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 41135745 - 41135642
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    ||||||||||||| || |||| ||| ||||| | || |||||||||||||||||||  || | ||||||||||| ||||| |||||||||||  | ||||    
T  41135745 aaaagagaaccaatccttagcctttaatttc-caaatgatcttctcttttggtttcctaagactcacccaagtttctcac-aaagactctcctttgatgt 41135648  T
Q  230 gtttcc 235  Q
    ||||||    
T  41135647 gtttcc 41135642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 6808446 - 6808382
Alignment:
Q  68 atgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||| ||| | ||||||||||||||||||||||| | | |||||| |||||||||||    
T  6808446 atgaacaagacactcaataattttcactctcccaaagtgtttcccaatgtttctcaactctagaa 6808382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 16216745 - 16216839
Alignment:
Q  137 aaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||| | |||| ||||||||| ||||||||||||||||||   ||  ||| |||||| |||||||||||| || |||||||| |||||||||||    
T  16216745 aaccaactcgtagcctttgatttc-ctaaggatcttctcttttaagttttcaaaattcactcaagttgctcac-aatgactctcctctcatgtgttt 16216839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 25651979 - 25651931
Alignment:
Q  162 ctaaggatcttctcttttggtttcacaacattcacccaagttgctcaca 210  Q
    |||||||||||| |||||| |||| ||| ||||||||||||||||||||    
T  25651979 ctaaggatcttcacttttgctttcccaagattcacccaagttgctcaca 25651931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 12318725 - 12318826
Alignment:
Q  131 aaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtg 230  Q
    ||||||||||||||| |||| ||||||||| | || ||| |||| ||||||| || ||| | |||||||||||||||| |||| |||||||  | |||||    
T  12318725 aaagagaaccaacccttagcctttgatttc-caaaagattttctattttggtctcccaagactcacccaagttgctcataaaa-actctcctttgatgtg 12318822  T
Q  231 tttc 234  Q
    ||||    
T  12318823 tttc 12318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 44646935 - 44647010
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaact 125  Q
    ||||||||||||| ||||||||||||||| || || ||||||||||  ||||||| ||||||| | ||| ||||||    
T  44646935 ttttctcaatctctccaatgaacaagacactcaataattttcactcatccaaagtatttacaaatattttccaact 44647010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 6808336 - 6808270
Alignment:
Q  167 gatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||||||||||||||  ||  | |||||| ||||||||||||| |||||| || ||||||||||    
T  6808336 gatcttctcttttggttttccattactcaccctagttgctcacaaatgactcttcattcatgtgttt 6808270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 16455633 - 16455588
Alignment:
Q  57 caatctcaccaatgaacaagacattc-atgattttcactctcccaa 101  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||    
T  16455633 caatctcaccaatgaacaagacactcaatgattttcactcacccaa 16455588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 4535783 - 4535819
Alignment:
Q  197 ccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    |||||||||||||||| |||| |||||||||||||||    
T  4535783 ccaagttgctcacaaacgactatccactcatgtgttt 4535819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 25652070 - 25652022
Alignment:
Q  83 atgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||| | |  || |||||||||||||||||||||||||||||    
T  25652070 atgattttcacacacttaaggtgtttacaattgtttcccaactctagaa 25652022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 2361104 - 2361318
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2361104 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 2361203  T
Q  132 -----------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctc 220  Q
               |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  2361204 tctaacctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactctc 2361303  T
Q  221 cactcatgtgtttcc 235  Q
    |||||||||||||||    
T  2361304 cactcatgtgtttcc 2361318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 34310848 - 34311061
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  34310848 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattatttcccaactctagaa 34310947  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  34310948 tctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 34311047  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  34311048 ccactcatgtgttt 34311061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 36 - 233
Target Start/End: Complemental strand, 6432003 - 6431794
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||        
T  6432003 cctaatttctacccattttcccaatctaaccaatgaacaagacactcatgattttcactctcccaatgtgtttacaattgtttcccaactctagaatcta 6431904  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  6431903 accctcaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacac 6431804  T
Q  224 tcatgtgttt 233  Q
    ||||||||||    
T  6431803 tcatgtgttt 6431794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 4508838 - 4509053
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  4508838 caaccctaatttctactcattttcccaatctcaccaatcaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 4508937  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              ||||||||||||| || |||| ||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||| ||||||    
T  4508938 tctaacccataaaagagaaccaatccttagcctttgatttcactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatgactct 4509037  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  4509038 ccactcatgtgtttcc 4509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 48599466 - 48599675
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  48599466 caaccctaatttctacccattttcccaatatcaccaatgaacaagacaatcatgattttcactcctccaaggtgtttacaattgtttcccaactctagaa 48599565  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  48599566 tataacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 48599665  T
Q  220 ccactcatgt 229  Q
    | ||||||||    
T  48599666 ctactcatgt 48599675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 4512522 - 4512737
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||| |||||||||| |||||||  |||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4512522 caaccttaatttctacccattttccaaatctcaccaatcaacaaggcactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 4512621  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  4512622 tataacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 4512721  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  4512722 ccactcatgtgtttcc 4512737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 2390318 - 2390105
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||   ||| |||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  2390318 caaccctaatttctacccatttttcgaatttcaccaatgaacaagacacttatgattttcgctctcccaaggtgtttacaattgtttcccaactctagaa 2390219  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |    
T  2390218 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactat 2390119  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  2390118 ccactcatgtgttt 2390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 29608773 - 29608557
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgat-tttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||  |||| ||||| ||| ||||||||||||||||||||||||||||    
T  29608773 caaccctaatttctacccattttcccaatctcaccaaagaacaagacactcatgaagtttcgctctctcaaggtgtttacaattgtttcccaactctaga 29608674  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  29608673 atctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaagactc 29608574  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  29608573 tccactcatgtgtttcc 29608557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 4510680 - 4510895
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||| |||||||||| |||||||  |||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4510680 caaccttaatttctacccattttccaaatctcaccaatcaacaaggcactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 4510779  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                ||||||||||| |  |||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||    
T  4510780 tctaacccataaaagagaaccaatcgttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaccaaagttgctcacaaatgactct 4510879  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  4510880 ccactcatgtgtttcc 4510895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 22270009 - 22269794
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| |||||||||    
T  22270009 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttagaattgtttcc-aactctaga 22269911  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| | ||||||||||| ||| ||| ||||||    
T  22269910 atctaacccccaaaagagaaccaacccatagcctatgatttcactaaggatcttctattttggtttcacaagactcacccaagtttctctcaatagactc 22269811  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  22269810 tccactcatgtgtttcc 22269794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 33 - 235
Target Start/End: Original strand, 8359450 - 8359665
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa- 131  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||| ||||     
T  8359450 aaccctaatttctacccattttcccaatctccccaatgaacaagacactcatgattttcactctctcaaggtgtttacaattgttttccaactcaagaat 8359549  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                || | ||||||| | |||| |||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  8359550 ctaaacccccaaaaaataaccaactcttagcctttgatttcactaaggattttctcttttggtttcacaagactcatccaagttgctcacaaaagactct 8359649  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  8359650 ccactcatgtgtttcc 8359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 6360073 - 6360257
Alignment:
Q  61 ctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacccata 148  Q
    |||||||||||||||| || |||||||||||| |||||||| ||||||| |||||||||||||||||||||            |||||||||||||| ||    
T  6360073 ctcaccaatgaacaagtcactcatgattttcattctcccaaggtgtttaaaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctta 6360172  T
Q  149 gcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    || ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  6360173 gcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgttt 6360257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 3259031 - 3258817
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||||     
T  3259031 caaccctagtttctacccattttcccaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctaga 3258932  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
               ||| |||||||||||| |||  ||||||||| |||||||||||||||||||||||||||| | |||||||||||||| | |||||||||    
T  3258931 atctaacccccaaatgagaaccaacccttag-gtttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctaataaaagactc 3258834  T
Q  219 tccactcatgtgtttcc 235  Q
    ||||||||| |||||||    
T  3258833 tccactcatatgtttcc 3258817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 22328641 - 22328745
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||||||||||||| |||||||||||| || ||||||| ||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||||    
T  22328641 aaaagagaaccaacccttagcttttgattaca-taaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactcatgt 22328739  T
Q  230 gtttcc 235  Q
     |||||    
T  22328740 ttttcc 22328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 47676268 - 47676360
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  47676268 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaa-tgtttcccaac 47676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 48491615 - 48491523
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||    
T  48491615 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaa-tgtttcccaac 48491523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 47674075 - 47674157
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  47674075 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 47674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 8153378 - 8153286
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  8153378 caaccctaatttctactcattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 8153286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 30024864 - 30024945
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaa 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||||    
T  30024864 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 30024945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 31733101 - 31733193
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  31733101 caaccctaatttctacccattttctcagtctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 31733193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 36146509 - 36146633
Alignment:
Q  1 agaaattagcttcaacaagctcnnnnnnnnncaaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctccc 99  Q
    ||||||||||||||||||||||          ||| ||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| |||    
T  36146509 agaaattagcttcaacaagctcacaaataacaaactctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcaccc 36146608  T
Q  100 aaagtgtttacaattgtttcccaac 124  Q
    || |||||||||| |||||||||||    
T  36146609 aaggtgtttacaaatgtttcccaac 36146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 48489467 - 48489375
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  48489467 caaccctaatttctacccattttcccaatctcaccaatgaacaagacatttaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 48489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 4538672 - 4538764
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||| |||||||||    
T  4538672 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaatt-tttcccaac 4538764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 4586197 - 4586105
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||| |||||||||| |||||||||||    
T  4586197 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgatttacactcacccaaggtgtttacaa-tgtttcccaac 4586105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 27347849 - 27347761
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  27347849 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 27347761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 14069965 - 14070047
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  14069965 caaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 14070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 14379993 - 14380075
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  14379993 caaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 14380075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 1113693 - 1113601
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||| || ||||||||||||| |||||  ||||||||| |||||||||||    
T  1113693 caaccctaatttctatccattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaagttgtttacaa-tgtttcccaac 1113601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 12097991 - 12098083
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||| || ||||||||||||| |||||  ||||||||| |||||||||||    
T  12097991 caaccctaatttctacccattttcccaatctaaccaatgaacaagacactcaatgattttcactcacccaagatgtttacaa-tgtttcccaac 12098083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 24526033 - 24526121
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| |||| |||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  24526033 cctaatttctacccattttcccaatttcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 24526121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 38671354 - 38671446
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||| ||| ||||| |||||||||| |||||||||||    
T  38671354 caaccctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttacaa-tgtttcccaac 38671446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 43864280 - 43864188
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  43864280 caaccctaatttctacccacttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 43864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 2761439 - 2761526
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  2761439 ctaatttctaccaattttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaatgtgtttacaa-tgtttcccaac 2761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 26417352 - 26417261
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||| | | ||| |||||||||| ||||||||||    
T  26417352 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcacccgctcaaggtgtttacaa-tgtttcccaa 26417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 18126680 - 18126588
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||| || ||||||||||||| |||||  ||||||||| |||||||||||    
T  18126680 caaccctaatttctacacatttttccaatctcaccaatgaacaaaacactcaatgattttcactcacccaagttgtttacaa-tgtttcccaac 18126588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 31105530 - 31105607
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  31105530 ctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 31105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 35853950 - 35853859
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  35853950 caaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 35853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 41317566 - 41317658
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| | || |||||||||||||  |||| |||||||||| |||||||||||    
T  41317566 caaccctaatttctaccaattttcccaatctcaccaatgaacaagagactcaatgattttcactcatccaaggtgtttacaa-tgtttcccaac 41317658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 31518827 - 31518752
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttac 110  Q
    ||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||    
T  31518827 cctaatttctacctattttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaaggtgtttac 31518752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 4178810 - 4178719
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  4178810 caaccctaatttctaccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 4178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 48408832 - 48408747
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  48408832 taatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 48408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 23555076 - 23554982
Alignment:
Q  32 caaccctaatttctacgcattttctc--aatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||||||||||| |||||| ||  |||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||||    
T  23555076 caaccctaatttctac-cattttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaactc 23554982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29991089 - 29990999
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||  | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  29991089 caaccctaatttctatcc-ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 29990999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 41649146 - 41649234
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||  |||||  ||||||||| ||||||||||||| || ||||||||||||  ||||| |||||||||| |||||||||||    
T  41649146 cctaatttctaccaatttttccaatctcacaaatgaacaagacactcaatgattttcacttacccaaggtgtttacaa-tgtttcccaac 41649234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 4253663 - 4253754
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||| | ||| |||||||||||| || || |||||||||| ||||| |||||    
T  4253663 aaccctaatttctac-cattttaccaatttcaccaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaac 4253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 496117 - 496206
Alignment:
Q  34 accctaatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||| ||| |  ||||||||||||| ||||| || ||||||| ||||||||||    
T  496117 accctaatttctacccattttcccaatctcacaaattaacaaaacactaaatgattttcactcacccaaggtttttacaa-tgtttcccaa 496206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 24514912 - 24514984
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  24514912 ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 24514984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 43363667 - 43363759
Alignment:
Q  140 caacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttc 234  Q
    |||||| |||| ||| ||||| |||| |||||||||||||||| || ||| |||||||||| |||||||| || |||||||  ||||||||||||    
T  43363667 caacccttagcatttaatttc-ctaaagatcttctcttttggtctctcaagattcacccaaattgctcac-aaggactctcatctcatgtgtttc 43363759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23344041 - 23343934
Alignment:
Q  1 agaaattagcttcaacaagctcnnnnnnnnncaaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctccc 99  Q
    ||||||||||||||||||||||          |||| |||||||||| | |||||  |||||||||||||||| |||||||| ||||||||||||| |||    
T  23344041 agaaattagcttcaacaagctcacaaagaataaaccttaatttctaccc-ttttccaaatctcaccaatgaactagacattcaatgattttcactcaccc 23343943  T
Q  100 aaagtgttt 108  Q
    || ||||||    
T  23343942 aaggtgttt 23343934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 23565198 - 23565280
Alignment:
Q  36 cctaatttctacgcattttctc--aatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgttt 118  Q
    ||||||||||||  ||||| ||  |||||||||||||||||||||| ||||||   ||||||| ||||| |||||||||| |||||    
T  23565198 cctaatttctacctattttttcctaatctcaccaatgaacaagacacttcatg---ttcactcacccaaggtgtttacaaatgttt 23565280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 40147297 - 40147082
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40147297 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgatttccactctcccaaggtgtttacaattgtttcccaactctagaa 40147198  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  40147197 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 40147098  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  40147097 ccactcatgtgtttcc 40147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 213501 - 213290
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  213501 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 213402  T
Q  132 ----------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctcc 221  Q
              || |||   ||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  213401 tctaacccccaaaaga--gaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctcc 213304  T
Q  222 actcatgtgtttcc 235  Q
    ||||||||||||||    
T  213303 actcatgtgtttcc 213290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 5058083 - 5057870
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  5058083 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactcttccaaggtgtttacaattgttttccaactctagaa 5057984  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||||| ||||||    
T  5057983 tctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactct 5057884  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  5057883 ccactcatgtgttt 5057870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 27015567 - 27015353
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27015567 caaccctaatttctacctattttcccaatctcaccaatgaccaa-acactcatgattttcactctcccaagatgtttacaattgtttcccaactctagaa 27015469  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  27015468 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggttttacaagactcacccaagttgctcacaaaagactct 27015369  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  27015368 ccactcatgtgtttcc 27015353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 28278352 - 28278137
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  28278352 caaccataatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaatgtgtttacaattgtttcccaactctagaa 28278253  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||| ||||||| |||| ||||||||||||||  ||||||||||||| |||||||| | ||||||||||||||||||| || ||||    
T  28278252 tctaacccctaaaagagagccaacccttagcatttgatttcactaacaatcttctcttttgatttcacaagactcacccaagttgctcacaatagtctct 28278153  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  28278152 ccactcatgtgtttcc 28278137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 38747041 - 38746826
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| ||||||||  ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38747041 caaccctaatttctacccattttcccaatctcattaatgaacaagatactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 38746942  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  38746941 tctaacccccaaaagagaaccaacccttagcctttgatttcaataaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactct 38746842  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||| ||||||||    
T  38746841 ccactcacgtgtttcc 38746826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 27637745 - 27637963
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||     
T  27637745 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcatgaattttcactcttccaaggtgttcacaattgtttcccaactctagc 27637844  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcactaaggatct--tctcttttggtttcacaacattcacccaagttgctcacaaaagac 216  Q
               |||||||||| |||   |||  ||||||||||||||||||||  |||||||||||||||||| | |||||||||||||||| |||||||    
T  27637845 atctaacccccaaaagagaacaaacttttagtctttgatttcactaaggatcttctctcttttggtttcacaagactcacccaagttgctcataaaagac 27637944  T
Q  217 tctccactcatgtgtttcc 235  Q
    ||| |||||||||||||||    
T  27637945 tcttcactcatgtgtttcc 27637963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 42426367 - 42426458
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || || |||||||||| ||||| |||||||||| ||||||||||    
T  42426367 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaataattttcactcacccaaggtgtttacaa-tgtttcccaa 42426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 4160558 - 4160465
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccact 224  Q
    |||||||||||||||| |||| ||| ||| | |||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  4160558 aaaagagaaccaacccttagcctttaattac-ctaaggatcttctcttttggtttcccaagattcaccctagttgctcacaaatgactctccact 4160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 533805 - 533713
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||  | ||||||||||||| ||||| |||||||||| |||||||||||    
T  533805 caaccctaatttctacccattttcccaatctcaccaatgaacaagacacgcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 533713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28750787 - 28750879
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||| ||| |||||||||||    
T  28750787 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttcaa-tgtttcccaac 28750879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 5887553 - 5887640
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  5887553 ctaatttctatccattttctcaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5887640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 39468681 - 39468773
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| | ||| |||||||||| |||||||||||    
T  39468681 caaccctaatttctacccattttcccaatctcactaatgaacaagacactcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 39468773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 42428563 - 42428644
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  42428563 aaccataatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 42428644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 8566082 - 8566160
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  8566082 cctaagttctacccattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 8566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 13488239 - 13488157
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||| || || |||||||||| ||||| |||||||||||    
T  13488239 caaccctaatttctacccattttcccaatcttaccaatgaacaagacactcaataattttcactcacccaaggtgtttacaat 13488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 32636860 - 32636778
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||| |||||||||| ||||||| |||||||||||||||| |||||| || ||||||||||||| ||||| |||||||||||    
T  32636860 caaccataatttctacccattttcccaatctcaccaatgaataagacactcaatgattttcactcacccaaggtgtttacaat 32636778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 16641091 - 16641263
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaactctag------------aaaagaga 137  Q
    ||||||||||||| ||||||||||||||| || |||| |||||||| | ||| |||||||||| |||| |||||||||||            ||||||||    
T  16641091 ttttctcaatctcgccaatgaacaagacacttaatgaatttcactcactcaaggtgtttacaaatgttccccaactctagaatctaatccccaaaagaga 16641190  T
Q  138 accaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaa 211  Q
    |||||||  |||| ||||||||   |||| |||||||||||||||||||||| | ||||| |||||| ||||||    
T  16641191 accaacctttagcctttgattt-tttaagtatcttctcttttggtttcacaagactcaccaaagttgttcacaa 16641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 19806415 - 19806328
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||  ||||||||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||||||||||    
T  19806415 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatga-tttcactcacccaaggtgtttacaa-tgtttcccaac 19806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 25412796 - 25412706
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  25412796 caaccctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 25412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 31183004 - 31182917
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||||| || || |||||||||| |||||||||||    
T  31183004 cctaatttctacccattttc-caatctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttacaa-tgtttcccaac 31182917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 538061 - 537970
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    ||||| |||||||||| ||||||| ||||||||| |||||||||||||  | ||||||||||||| ||||| |||||||| | ||||||||||    
T  538061 caaccttaatttctacccattttcccaatctcactaatgaacaagacacgcaatgattttcactcacccaaggtgtttacga-tgtttcccaa 537970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 13343097 - 13343005
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  13343097 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 13343005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 33831712 - 33831634
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||| ||||||  ||||||||| |||||| |||||| || ||||||||||||| ||||| |||||||||||    
T  33831712 cctaatttctacccatttttccaatctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttacaat 33831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 33906289 - 33906350
Alignment:
Q  147 tagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcac 209  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  33906289 tagcctttgatttc-ctaaggatcttctcttttggtttcccaagactcacccaagttgctcac 33906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 42310075 - 42310149
Alignment:
Q  40 atttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||| || |||||||||||||||||||| ||||||| || ||||||||||||  |||||| ||||||||||    
T  42310075 atttctacccaatttctcaatctcaccaatgagcaagacactcaatgattttcacttacccaaaatgtttacaat 42310149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 3075794 - 3075882
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||  |||||||||||||||| ||||||| ||||| || |||||||||||||  | || |||||||||| |||||||||||    
T  3075794 cctaatttctacctattttctcaatctcacaaatgaacgagacactcaatgattttcactcatcaaaggtgtttacaa-tgtttcccaac 3075882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 13239786 - 13239696
Alignment:
Q  33 aaccctaatttctacgcattttctc-aatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  13239786 aaccctaatttctac-cattttttccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 13239696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 30182624 - 30182533
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||| ||| |||||||||||    
T  30182624 caaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttgcaa-tgtttcccaac 30182533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 30683054 - 30683134
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||||||||||||| | ||||| ||||||||| ||||||||||||| || |||||||||||||  |||| |||||||||||    
T  30683054 aaccctaatttctaccctttttcccaatctcacaaatgaacaagacactcaatgattttcactc-accaaggtgtttacaat 30683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 9049490 - 9049565
Alignment:
Q  49 cattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    ||||||| ||| ||||| ||| ||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||    
T  9049490 cattttcccaaactcactaatcaacaagacactcagtgatttttactcacccaaagtgtttacaaatgtttcccaa 9049565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 42926904 - 42926838
Alignment:
Q  57 caatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||| |||||||||| ||| |||||||||||| ||||| |||||||||| ||||||||||    
T  42926904 caatctcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 42926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 316688 - 316609
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaa 212  Q
    |||||||||||||||| |||| ||||||||| || ||||| |||||||||||| || ||| ||||| ||||||||||||||||    
T  316688 aaaagagaaccaacccttagcctttgatttc-ct-aggattttctcttttggtctcccaagattca-ccaagttgctcacaaa 316609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 36074196 - 36074268
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  36074196 ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 36074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 21205895 - 21205999
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    ||||||||||||| || |||  |||||||||| ||||| ||||| ||||| |||||  || |||||||||| || || ||||| |||||  |||||||||    
T  21205895 aaaagagaaccaatccttagtctttgatttca-taaggttcttcacttttagtttcctaaaattcacccaaatttctgacaaatgactcctcactcatgt 21205993  T
Q  230 gtttcc 235  Q
    ||||||    
T  21205994 gtttcc 21205999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 37439144 - 37439078
Alignment:
Q  57 caatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||| || |||||||||||||  ||||||||||||||| |||||||||||    
T  37439144 caatctcaccaatgaataagacactcaatgattttcactc-accaaagtgtttacaa-tgtttcccaac 37439078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 14689653 - 14689734
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaa 212  Q
    |||||||||||||||| |||| ||||||||  ||||||||||| ||||||||| || ||| | | | | ||||||||||||||    
T  14689653 aaaagagaaccaacccctagcctttgattt-tctaaggatcttttcttttggtgtcccaagacttatctaagttgctcacaaa 14689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 16452110 - 16452035
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||| ||||||  |||||||| |||||||||||||| || |||||| ||||| | |||| |||||||||||    
T  16452110 taatttctacccatttttccaatctcatcaatgaacaagacactcaatgattgtcact-taccaaggtgtttacaat 16452035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 17763026 - 17762810
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  17763026 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcatgaattttcactctctcaaagtgtttacaattgtttcccaactctaga 17762927  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||    
T  17762926 atctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaagactc 17762827  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  17762826 tccactcatgtgtttcc 17762810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 5043659 - 5043448
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||        
T  5043659 cctaatttctactcattttctcaatctcacgaatgaacaagacactcatgattttcactctcacaaggtgtttacaattgtttcccaactctagaatcta 5043560  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  5043559 acccccaaaagagaaccaactcttagcctttgattccactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaagactctccac 5043460  T
Q  224 tcatgtgtttcc 235  Q
    ||||||||||||    
T  5043459 tcatgtgtttcc 5043448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 21593700 - 21593489
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  21593700 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 21593601  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  21593600 tctaacccccaaaagagaaccaacccttagc-tttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctcaaaaatgactct 21593503  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  21593502 ccactcatgtgttt 21593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 3808841 - 3809055
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3808841 caaccctaatttctacctattttcccaatctcaccaatgaacaagacacttgtgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 3808940  T
Q  132 -----------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctc 220  Q
               || ||||||||||| |||| |||||||||||||||||| |||||||||||||| |||| | |||||||||||||||||||| |||||||    
T  3808941 tctaacccccaaaaagaaccaacccttagcctttgatttcactaaggattttctcttttggttttacaagactcacccaagttgctcacaaatgactctc 3809040  T
Q  221 cactcatgtgtttcc 235  Q
    |||||||||||||||    
T  3809041 cactcatgtgtttcc 3809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 2973075 - 2973286
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||| |||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||        
T  2973075 cctaatttctacccattttcccaatctcaccaatgaacacgacacttatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 2973174  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| ||     
T  2973175 atccctaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgttcacaaatgactctgcat 2973274  T
Q  224 tcatgtgtttcc 235  Q
    ||||||||||||    
T  2973275 tcatgtgtttcc 2973286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 603237 - 603427
Alignment:
Q  57 caatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacc 144  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||            |||||||||||||    
T  603237 caatctcaccaatgaacaagacactcatgattttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacc 603336  T
Q  145 catagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
      |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||    
T  603337 attagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaggacactccactcatgtgtttcc 603427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 26830255 - 26830471
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcacc-aatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||| ||||||||||| ||||||  |||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26830255 caactctaatttctacccatttttccaatctcacccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgttttccaactctaga 26830354  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||| |||||    
T  26830355 atctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactc 26830454  T
Q  219 tccactcatgtgtttcc 235  Q
    | | ||||| |||||||    
T  26830455 tgcgctcatctgtttcc 26830471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 22424959 - 22425171
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactcta-- 128  Q
    |||||||||||||||| ||||||  |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||      
T  22424959 caaccctaatttctacccatttttccaatctcaccaacgaacaagacactcatgaattttcactctcccaaagtgtttacaattgtttcccaactctata 22425058  T
Q  129 ---------gaaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||| | | ||| |||||||||  ||| ||||||    
T  22425059 atctaaccccaaaagagaaccaacccttagc-tttgatttc-ctaaggatattctcttttggtttcacaagactaaccgaagttgctcttaaatgactct 22425156  T
Q  220 ccactcatgtgtttc 234  Q
     ||| ||||||||||    
T  22425157 tcacccatgtgtttc 22425171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 17757993 - 17757905
Alignment:
Q  147 tagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    |||| |||||||||||| | ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  17757993 tagcctttgatttcactgatgatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcc 17757905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 9183163 - 9183255
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  9183163 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 9183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 3039035 - 3039127
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||| |||||||||||    
T  3039035 caaccctaatttctaccaattttcccaatctcaccaatgaacaagacattcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 3039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28137540 - 28137632
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  28137540 caaccctaatttctacccattttcccattctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 28137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4045489 - 4045364
Alignment:
Q  1 agaaattagcttcaacaagctcnnnnnnnnncaaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctccc 99  Q
    ||||||||||||||||||||||          ||||||||||||||| ||||||| ||||||| ||||| ||||||||| ||| |||||||||||| |||    
T  4045489 agaaattagcttcaacaagctcataaagaacaaaccctaatttctac-cattttcccaatctctccaataaacaagacactcaatgattttcactcaccc 4045391  T
Q  100 aaagtgtttacaattgtttcccaactc 126  Q
     | |||||||||| |||||||||||||    
T  4045390 taggtgtttacaaatgtttcccaactc 4045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5406332 - 5406422
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5406332 caaccctaatttctac-cattttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5406422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5410657 - 5410747
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5410657 caaccctaatttctac-cattttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5410747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 5741040 - 5741120
Alignment:
Q  137 aaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    ||||||||| |||| |||||||| ||||||||||||| ||||| ||||| ||| |||||||||| |||||||||||||||||    
T  5741040 aaccaacccttagcctttgattt-actaaggatcttcactttttgtttctcaagattcacccaaattgctcacaaaagactc 5741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 21588967 - 21588913
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga 86  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  21588967 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatga 21588913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 2171663 - 2171754
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  2171663 caaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 2171754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5413526 - 5413616
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5413526 caaccctaatttctac-ctttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaatgtgtttacaa-tgtttcccaac 5413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 17758059 - 17757994
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactct 96  Q
    |||||||||||||||| ||||||| ||||||||| |||||| |||||| ||||| |||||||||||    
T  17758059 caaccctaatttctacccattttcccaatctcacaaatgaagaagacactcatgaattttcactct 17757994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 33211317 - 33211409
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||| ||| || |||||||||| |  ||||| |||||||||| |||||||||||    
T  33211317 caaccataatttctaccaattttcccaatctcaccaatgaacaaaacactcaatgattttcagtgacccaaggtgtttacaa-tgtttcccaac 33211409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 16452461 - 16452543
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||||    
T  16452461 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaat 16452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 26800633 - 26800591
Alignment:
Q  193 tcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  26800633 tcacccaagttgctctcaatagactctccactcatgtgtttcc 26800591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 31404807 - 31404887
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||| |||||||||  |||||||||||| || |||||||||||||  |||| |||||||||||    
T  31404807 caaccctaatttctac-cattttcccaatctcactgatgaacaagacactcaatgattttcactc-accaaggtgtttacaat 31404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 26954418 - 26954509
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| || |||| |||||||||  |||||||||||| ||| |||||||||||| || || |||||||||| |||||||||||    
T  26954418 caaccctaatttatac-caatttcccaatctcacatatgaacaagacactcaatgattttcactccccaaaggtgtttacaa-tgtttcccaac 26954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 30834668 - 30834733
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactc 95  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||    
T  30834668 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc 30834733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 50673982 - 50674193
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||        
T  50673982 cctaatttctactcattttctcaatctcacaaatgaacacgacactcatgattttcactctcccaaggtgtttacaattgttttccaactctagaatcta 50674081  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  50674082 acccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccac 50674181  T
Q  224 tcatgtgtttcc 235  Q
    ||||||||||||    
T  50674182 tcatgtgtttcc 50674193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 54883056 - 54882841
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  54883056 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 54882957  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||    
T  54882956 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaaagactct 54882857  T
Q  220 ccactcatgtgtttcc 235  Q
     |||||||||||||||    
T  54882856 acactcatgtgtttcc 54882841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 41964451 - 41964236
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| |||| ||||||| |||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  41964451 caaccctaatttctacccattttcccaatttcaccaacgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaactctaga 41964352  T
Q  131 a-----------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
    |           |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41964351 atctaaccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 41964252  T
Q  220 ccactcatgtgtttcc 235  Q
    | ||||||||||||||    
T  41964251 ctactcatgtgtttcc 41964236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 233
Target Start/End: Complemental strand, 12073424 - 12073215
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||| ||||||||||||| | ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||        
T  12073424 cctaatttctacccattttcccaatctcaccaataagcaagacactcatgattttcacactcccaaggtgtttacaattgtttcccaactctagaatcta 12073325  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||| |||    
T  12073324 acccccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactcttcac 12073225  T
Q  224 tcatgtgttt 233  Q
    ||||||||||    
T  12073224 tcatgtgttt 12073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 8665444 - 8665228
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||| |||||| |||||||||| |||| |||||||||||||||||||||||| |||    
T  8665444 caaccctaatttctacccattttcccattctcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacaattgtttcccaactccaga 8665345  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  8665344 atctaacccccaaaagaaaaccaacacataacctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactc 8665245  T
Q  219 tccactcatgtgtttcc 235  Q
    ||||||| |||||||||    
T  8665244 tccactcctgtgtttcc 8665228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 6655992 - 6655777
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    ||||| |||||||||| |||||| |||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||      
T  6655992 caaccttaatttctacccattttttcaatctcacaagtgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 6655893  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              ||||||||| |||||  |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  6655892 tctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactct 6655793  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  6655792 ccactcatgtgtttcc 6655777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 379412 - 379200
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg--attttcactctcccaaagtgtttacaattgtttcccaactctagaa-- 131  Q
    |||||||||||| ||||||||||||||||| ||||||||||| | | ||   |||||||||||||||| |||||||||||||||||||||||||||||      
T  379412 cctaatttctacccattttctcaatctcacaaatgaacaagatactaattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 379313  T
Q  132 ----------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctcc 221  Q
              |||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||    
T  379312 taacccacaaaagagaaccaacccttagcctttgatttc-ctaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctcc 379214  T
Q  222 actcatgtgtttcc 235  Q
    ||||||||||||||    
T  379213 actcatgtgtttcc 379200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 35662477 - 35662265
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctag- 129  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||| ||| ||| |||||||||||||||||||||||||||     
T  35662477 caaccctaatttctacccattttttcaatctcaccaatgaacaagacactcatgatttttcacactctcaaggtgtttacaattgtttcccaactctaga 35662378  T
Q  130 -----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
               |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||    
T  35662377 atctaacacccaaaagagaaccaacccttagc-tttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaagaactc 35662280  T
Q  219 tccactcatgtgttt 233  Q
    |||| ||||||||||    
T  35662279 tccattcatgtgttt 35662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 2209748 - 2209580
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag--- 129  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||       
T  2209748 aaccctaatttctacccattttcccaatctcaacaatgaacaagacactcatgattttcactctcccaaggtgtttacaattatttcccaactctagaat 2209649  T
Q  130 ---------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaa 189  Q
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2209648 ctaacccccaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaa 2209580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 8648175 - 8647959
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||  ||||||| || |||||||||||||||||||| |||||| |||||||||| |||| ||||||||| |||||||| ||||| |||    
T  8648175 caaccctaatttctatccattttcccattctcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacagttgtttcctaactccaga 8648076  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  8648075 atctaacccccaaaagagaaccaacacataacatttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactc 8647976  T
Q  219 tccactcatgtgtttcc 235  Q
    ||||||| |||||||||    
T  8647975 tccactcctgtgtttcc 8647959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 55085497 - 55085712
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  55085497 caaccttaatttctacctattttc-caatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaattgtttccgaactctaga 55085595  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            | ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| |||||    
T  55085596 atctaacccccaaaggagaatcaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatgactc 55085695  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  55085696 tccactcatgtgtttcc 55085712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 46703536 - 46703327
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatg-attttcactctcccaaagtgtttacaattgtttcccaactcta-- 128  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||      
T  46703536 caaccctaatttctactcattttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattgtttcccaacactata 46703437  T
Q  129 ----------gaaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
               ||||||||||||||   |||| ||||||||| |||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||    
T  46703436 atctaacccccaaaagagaaccaacttttagcctttgatttc-ctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaaagactc 46703338  T
Q  219 tccactcatgt 229  Q
    |||| ||||||    
T  46703337 tccattcatgt 46703327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 50262864 - 50263045
Alignment:
Q  66 caatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa------------aagagaaccaacccatagcttt 153  Q
    |||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||            |||||||||||||  |||| ||    
T  50262864 caataaacaagacactcatgattttcactctcccaaggtatttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctt 50262963  T
Q  154 tgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    |||||||||||||| ||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||    
T  50262964 tgatttcactaagggtcttctcttttggtttcacaagagtcaccgaggttgctcacaaaagactctccactcatgtgtttcc 50263045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 26364191 - 26364086
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  26364191 aaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgt 26364092  T
Q  230 gtttcc 235  Q
    ||||||    
T  26364091 gtttcc 26364086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 40632481 - 40632382
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  40632481 caactctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttctcaactctagaa 40632382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 21688285 - 21688186
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||||    
T  21688285 caaccctaatttctacccatttttctcaatctcaccgatgaacaagacactcatgattttcactcccccaaggtgtttagaattgtttcccaactctaga 21688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 41639462 - 41639363
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||| |||||| |||||| ||||||||| || ||||||||||||||| || |||||||||||||||||||||||||||||    
T  41639462 caaccctaatttctacccattttcccaatcttaccaataaacaagacactcgtgattttcactctcctaaggtgtttacaattgtttcccaactctagaa 41639363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 27417097 - 27417273
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||    ||||||||||||||||  ||||| ||      
T  27417097 caaccctaatttctacacattttaccaatctcaccaatgaacaagacactcatgattttcactctccc----tgtttacaattgtttcaaaactcaagaa 27417192  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaa 200  Q
              |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||| |||| | ||||||||    
T  27417193 tctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttcttttttggttttacaagactcacccaa 27417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 40630878 - 40630805
Alignment:
Q  162 ctaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40630878 ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcc 40630805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 12119573 - 12119361
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcat-gattttcactctcccaaagtgtttacaattgtttcccaactcta--- 128  Q
    |||| |||||||||| | ||||  |||||||||| |||||||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||       
T  12119573 aaccataatttctactcttttttccaatctcacctatgaacaagacactcattgattttcactctcccaaggtatttacaattgtttcccaactctataa 12119474  T
Q  129 ---------gaaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| || | || ||||||  ||||||||||||||||||||||||||| |  ||||||| ||||||||||| || ||     
T  12119473 tctaacccccaaaagagaaccaacccttaac-ttcgatttc-ttaaggatcttctcttttggtttcacaagacacacccaaattgctcacaaatgattca 12119376  T
Q  220 ccactcatgtgtttc 234  Q
    ||||| |||||||||    
T  12119375 ccactaatgtgtttc 12119361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 33989787 - 33989683
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||||||| || || |||| ||||||| | ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||||||||||    
T  33989787 aaaagagaacaaatccttagcctttgattac-ctaaggatcttctcttttggtttcaaaagactcacccaagttgctcacaaatgactctccactcatgt 33989689  T
Q  230 gtttcc 235  Q
    ||||||    
T  33989688 gtttcc 33989683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 31474182 - 31474096
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttccca 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||    
T  31474182 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaa-tgtttccca 31474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 48893774 - 48893856
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  48893774 caaccctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 48893856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 52095494 - 52095586
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  52095494 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 52095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 54200038 - 54200130
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  54200038 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaa-tgtttcccaac 54200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 5429714 - 5429623
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  5429714 aaccctaatttctactcattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5429623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 41639299 - 41639207
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| |||||| |||||| ||||||||| || ||||||||||||||| || ||||||||||||||| ||||||    
T  41639299 caaccctaatttctacccattttcccaatcttaccaataaacaagacactcgtgattttcactctcctaaggtgtttacaattgttacccaac 41639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 26175768 - 26175860
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  26175768 caaccctaatttctccccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 26175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 52082789 - 52082881
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  52082789 caaccctagtttctacccattttcccaatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 52082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 37229857 - 37229947
Alignment:
Q  34 accctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| ||||| |||||    
T  37229857 accctaatttctac-cattttcccaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaaatgttttccaac 37229947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 36994560 - 36994478
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  36994560 caaccttaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 36994478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 5871852 - 5871764
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  5871852 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 5871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 13009567 - 13009655
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  13009567 cctaatttctacccattttcacaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 13009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 47038542 - 47038633
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| ||||||| || |||||||||||    
T  47038542 caaccctaatttctacccattttc-caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttataa-tgtttcccaac 47038633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 52467490 - 52467579
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||| ||||| ||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  52467490 cctaatttctacccattttcccaacctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 52467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 12745568 - 12745659
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||||||||| |||||||  |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||| ||||||||||||    
T  12745568 caaccctaatttctacccattttcctaatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-attgtttcccaa 12745659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 36463524 - 36463615
Alignment:
Q  35 ccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||||||||||||    
T  36463524 ccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgaatttcactcacccaaggtgtttacaa-tgtttcccaactc 36463615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 9927590 - 9927681
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||||||||||  |||| |||||||||| |||||||||||    
T  9927590 caaccctaatttctacccattttcccaatctcaccaatgaataagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 9927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 12739682 - 12739774
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||| ||||| || || |||||||||| |||||||||||    
T  12739682 caaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttacaa-tgtttcccaac 12739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 12747888 - 12747980
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||| ||||| || || |||||||||| |||||||||||    
T  12747888 caaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttacaa-tgtttcccaac 12747980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 26699598 - 26699671
Alignment:
Q  53 ttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaact 125  Q
    |||| |||||| | ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  26699598 ttctgaatctctctaataaacaagacattcaatgattttcactcacccaaagtgtttacaattgtttcccaact 26699671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29254530 - 29254438
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||||| || |||||||||| || ||||| |||||||||| |||||||||||    
T  29254530 caactctaatttctacccaatttcccaatctcaccaatgaacaagacactcaatgattttcattcacccaatgtgtttacaa-tgtttcccaac 29254438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 34570546 - 34570638
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||| |||||  ||||| ||| |||||||||||    
T  34570546 caaccctaatttctacctattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaagatgttttcaa-tgtttcccaac 34570638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 46569816 - 46569893
Alignment:
Q  158 ttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgtttcc 235  Q
    |||| |||||| ||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||||| |||||||    
T  46569816 ttcaataaggaccttctcttttggtttcataagattcacctaagttgttcacaaaagactttccactcatttgtttcc 46569893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 56178769 - 56178860
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  56178769 caaccctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 56178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 24969143 - 24969055
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||| ||||||  |||||||||||| |||||||||  ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  24969143 ctaatttctacccatttttccaatctcaccaaagaacaagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 24969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 51337094 - 51337018
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||| | |||||||||||||||||||||||| |||| || ||||||||||||| ||||| |||||||||||    
T  51337094 taatttctaccctttttctcaatctcaccaatgaacaggacactcaatgattttcactcacccaaggtgtttacaat 51337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 34112537 - 34112435
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    ||||||||||||| |  |||| ||||||||| ||||||||||||  ||||| |||  ||| ||||| |||||||||||||| | ||||||||||||||||    
T  34112537 aaaagagaaccaaactttagcctttgatttc-ctaaggatcttcagttttgtttttccaagattcatccaagttgctcacagatgactctccactcatgt 34112439  T
Q  230 gttt 233  Q
    ||||    
T  34112438 gttt 34112435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 48143079 - 48142986
Alignment:
Q  32 caaccctaatttcta-cgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| |   ||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  48143079 caaccctaatttctacctttttttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 48142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 3913479 - 3913408
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtt 107  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||    
T  3913479 ctaatttctactcattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 26364272 - 26364225
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagaca 79  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  26364272 caaccctaatttctacccattttcccaatctcaccaatgaacaagaca 26364225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 37740661 - 37740570
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| | |||||  |||||||||||||||||||||| ||| ||||||||||||  |||| |||||||||| |||||||||||    
T  37740661 caaccctaatttataccctttttccaaatctcaccaatgaacaagacactcagtgattttcactc-accaaggtgtttacaa-tgtttcccaac 37740570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 41961336 - 41961264
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagtt 203  Q
    |||||||||||||||| |||||||||||||| |||||||| |||| ||||||| || ||| | |||||||||||    
T  41961336 aaaagagaaccaacccttagcttttgatttc-ctaaggatattcttttttggtctcccaagactcacccaagtt 41961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 45687319 - 45687407
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| || |  | |||||||| ||||| |||||||||| |||||||||||    
T  45687319 cctaatttcttcccattttcccaatctcaccaatgaacaagacaatcaaaaaatttcactcacccaaggtgtttacaa-tgtttcccaac 45687407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 4587988 - 4587902
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||   ||||| |||| ||||||||||||| |||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  4587988 taatttctaccttttttcccaatttcaccaatgaacatgacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 4587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 5207976 - 5208066
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    ||||||||||||||| | ||||| ||||| | |||||||||||| || | | |||||||||||| ||||| |||||||||| ||||||||||    
T  5207976 aaccctaatttctaccctttttc-caatcactccaatgaacaagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaa 5208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 5370244 - 5370308
Alignment:
Q  57 caatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttccca 122  Q
    ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||| |||||||||    
T  5370244 caatctcaccaatgaacaagacactcaatgattttcactc-accaaagtgtttacaa-tgtttccca 5370308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 6542332 - 6542405
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||| ||||||||||||||| || || |||||||||| ||||| |||||||||| |||||||||||    
T  6542332 ttttcccaatctccccaatgaacaagacactcaataattttcactcacccaaggtgtttacaa-tgtttcccaac 6542405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 29999939 - 30000019
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || | |||||||||||  |||| |||||||||||    
T  29999939 caaccctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaacgattttcactc-accaaggtgtttacaat 30000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 48142512 - 48142605
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    ||||||||||||||  ||| ||| |||||||| |||||  ||||||| ||| |||||||||||| ||| ||||||||| || |||||||||||||    
T  48142512 aaccctaatttctat-catgttcccaatctcatcaatgggcaagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactc 48142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 33089813 - 33089722
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgt 229  Q
    |||||||||||||||  |||| ||||||||  ||||||||||||||||||||           || ||||||||||||||||| ||||||||||||||||    
T  33089813 aaaagagaaccaacctttagcctttgatttt-ctaaggatcttctcttttgg-----------tctcccaagttgctcacaaatgactctccactcatgt 33089726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 3786015 - 3785926
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctcc 221  Q
    |||||||||||||| | |||| ||||||||| |||||||| |||||||||||| || ||| | || | ||| |||||||| |||||||||||    
T  3786015 aaaagagaaccaactcttagcctttgatttc-ctaaggatattctcttttggtctcccaagactcgcacaatttgctcac-aaagactctcc 3785926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 46147523 - 46147570
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagaca 79  Q
    |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  46147523 caaccctaatttctacccatttttccaatctcaccgatgaacaagaca 46147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 29056377 - 29056301
Alignment:
Q  49 cattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||| ||||||| | ||||||||| ||| ||| ||||||| |||| ||||| |||||| ||| |||||||||||    
T  29056377 cattttcccaatctctctaatgaacaaaacactcaatgatttttactcacccaaggtgtttccaaatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 1631868 - 1632079
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||        
T  1631868 cctaatttctacccatttttccaatctcaccaatgaacaagacactcatgattttcactctctcaaggtgtttacaattgtttcccaactctagaatcta 1631967  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  1631968 acccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccac 1632067  T
Q  224 tcatgtgtttcc 235  Q
    ||||||||||||    
T  1632068 tcatgtgtttcc 1632079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 42288242 - 42288457
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||| |||||||||| ||||||| |||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  42288242 caaccttaatttctacccattttcccaatctcaccaatgcacaagacactcgtgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 42288341  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42288342 tctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 42288441  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  42288442 ccactcatgtgtttcc 42288457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 35447016 - 35447231
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||||||||||||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35447016 caaccctaatttctaccaattttaccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 35447115  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  35447116 tctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaagactct 35447215  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  35447216 ccactcatgtgtttcc 35447231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 45726965 - 45726750
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||| ||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  45726965 caactctaatttctacccattttcccaatctcaccaatgaataagacactcatgattttcactctcccaaggtgtttacaattgtttcctaaccctagaa 45726866  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||    
T  45726865 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacatgactcacccaagttgctcacaaatgactct 45726766  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  45726765 ccactcatgtgtttcc 45726750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 233
Target Start/End: Complemental strand, 24398066 - 24397881
Alignment:
Q  57 caatctcaccaatgaacaagacattcat-gattttcactctcccaaag-tgtttacaattgtttcccaactctagaa---------aagagaaccaaccc 145  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||||||||| ||          | |||||||||||    
T  24398066 caatctcaccaatgaacaagacactcattgattttcactcttccaaaggtgtttacaattgtttcccaactctataatctaacccccaaagaaccaaccc 24397967  T
Q  146 atagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
     |||||||   |||  |||||||| ||||||||||||||||||| | | |||||| ||| ||||||| ||||||||||||||||||||    
T  24397966 ttagctttgacttt--ctaaggatattctcttttggtttcacaagactaacccaaattggtcacaaatgactctccactcatgtgttt 24397881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29867905 - 29867813
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  29867905 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 29867813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 34139903 - 34139995
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  34139903 caaccctaatttctacccattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 34139995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 17450623 - 17450411
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctag----- 129  Q
    |||||| ||||| ||||||   |||||||||||||||||||||| ||| |||||||||||| ||||| |||||| ||| ||||| ||||||||||         
T  17450623 cctaatctctacccatttttcaaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttgcaaatgtttgccaactctagaatcc 17450524  T
Q  130 -------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagact-ctcc 221  Q
           || |||||| |||||| |||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||| |||||||  |||| || |    
T  17450523 aacccccaatagagaatcaacccttagcctttgatttc-ctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaattgactccttc 17450425  T
Q  222 actcatgtgtttcc 235  Q
     |||||||||||||    
T  17450424 gctcatgtgtttcc 17450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 13121803 - 13121712
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  13121803 aaccctaatttctac-cattttcccagtctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaac 13121712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 17057501 - 17057583
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  17057501 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 17057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 17085484 - 17085566
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  17085484 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 17085566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 36318141 - 36318223
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  36318141 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 36318223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 11690533 - 11690445
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  11690533 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 36773598 - 36773506
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| | | ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  36773598 caaccctaatttattcccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 36773506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 38312276 - 38312184
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| | ||| |||| ||||| |||||||||||    
T  38312276 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacacaaggtgtatacaa-tgtttcccaac 38312184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 39284921 - 39284829
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||| | || ||||||||||||| ||||| |||||||||| |||||||||||    
T  39284921 caaccctaatttctacccatttttccaatctcaccaatgaacaagatactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 39284829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 42362384 - 42362296
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  42362384 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 42362296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 33162582 - 33162676
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||||||||||| |||||||  ||| |||||||||||||||||| || |||||||||| || ||||| |||||||||| |||||||||||||    
T  33162582 caaccctaatttctacccattttcctaatttcaccaatgaacaagacactcgatgattttcaatcacccaaggtgtttacaa-tgtttcccaactc 33162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 2334550 - 2334641
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  2334550 caacccttatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 2334641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 14633962 - 14634050
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  14633962 cctaatttctacccattttaccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 14634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 11151728 - 11151815
Alignment:
Q  37 ctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||| ||||||| |||| |||||||||||||||| | || ||||||||||||| ||||| |||||||||| |||||||||||    
T  11151728 ctaatttctacccattttcccaatttcaccaatgaacaagagactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11151815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 723880 - 723968
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| || |||  ||||||||| ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  723880 cctaatttctacccagttttccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 5723392 - 5723478
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| | ||||||||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  5723392 cctaatttctaccc-ttttctcaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 5723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 11067341 - 11067249
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| ||||||||||| ||||||  |||| ||||||||||| |||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  11067341 caacactaatttctacccatttttccaatttcaccaatgaataagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 11067249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24885693 - 24885605
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| |||| | || ||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  24885693 cctaatttctactcattttcccaattttacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 24885605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 5700271 - 5700347
Alignment:
Q  49 cattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| ||||||||||||||| || ||| |||||| || |||||||||||||||| |||||| ||||    
T  5700271 cattttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctcaac 5700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 45099791 - 45099699
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  45099791 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 45099699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 36205796 - 36205887
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||| | |||||||||||    
T  36205796 caaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacca-tgtttcccaac 36205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 7815407 - 7815498
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| || | |||||||||||||||||||||||||||||  | ||||||||||| | || || |||||||||| |||||| ||||    
T  7815407 aaccctaatttcaac-ctttttctcaatctcaccaatgaacaagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaac 7815498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 11049584 - 11049493
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||| ||| |||||||  |||||||||||  ||||||||| ||| |||||||||||  ||||| |||||||||| |||||||||||    
T  11049584 aaccctaatttatac-cattttcctaatctcaccaaaaaacaagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 6595138 - 6595221
Alignment:
Q  32 caaccctaatttctacgcattttctc--aatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaatt 114  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||||||  | |||||| ||||||| |||||||||||||||||    
T  6595138 caaccctaatttctac-cattttttcctaatctcaccaatgaacaagacacccaatgattctcactct-ccaaagtgtttacaatt 6595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 12123717 - 12123809
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| ||||||| ||| ||||||| ||||||| | ||||||||||||| || |||||||||||||  |||| ||||||| || |||||||||||    
T  12123717 caactctaatttatactcattttc-caatctctcaaatgaacaagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaac 12123809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 33648074 - 33647993
Alignment:
Q  152 tttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||||| ||||||||||||||||||||||| | || | || || |||| ||| ||||| ||||||| |||||| |||||    
T  33648074 tttgatttccctaaggatcttctcttttggttttataagactcgcctaagtagctaacaaatgactctctactcatatgttt 33647993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 36988208 - 36988299
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||||  ||||| ||||||||||||||||| || |||||||||||||  |||| |||||||| | |||||||||||    
T  36988208 caaccctaatttctacccttttttccaatcccaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacta-tgtttcccaac 36988299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 4503264 - 4503356
Alignment:
Q  32 caaccctaatttctacgcattttctc--aatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||| ||  |||||| ||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  4503264 caaccctaatttctac-cattttttcccaatctctccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 4503356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 7451158 - 7451123
Alignment:
Q  198 caagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7451158 caagttgctcacaaatgactctccactcatgtgttt 7451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 30833381 - 30833290
Alignment:
Q  32 caaccctaatttctacgcattt-tctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | ||| || |||||||||||| |||||||||| ||| |||||| ||||| || ||||||||||||| |||||||||||    
T  30833381 caaccctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatgatttacactcacc-aaagtgtttacaa-tgtttcccaac 30833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 43731051 - 43730991
Alignment:
Q  152 tttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaa 213  Q
    ||||||||| ||| |||| |||| |||||||||| ||| |||||||||| ||||||||||||    
T  43731051 tttgatttc-ctacggatattctattttggtttcccaagattcacccaaattgctcacaaaa 43730991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 17490283 - 17490368
Alignment:
Q  39 aatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||| | ||||  |||||| ||| ||||| |||||||    
T  17490283 aatttctac-cattttc-caatctcaacaatgaacaagacattcaatgattttcacccacccactgtgtttgcaa-tgttttccaactc 17490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 4283560 - 4283345
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||      
T  4283560 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgattttcactctcctaaggtgtttacaattgtttcccaactctagaa 4283461  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||| |    
T  4283460 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaaagacttt 4283361  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  4283360 ccactcatgtgtttcc 4283345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 40328811 - 40328600
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa---- 131  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||        
T  40328811 cctaatttctacccattttcccaatctcacaaatgaacaagacattcatgattttcactctcccaagatgtttacaattgtttcccaactctagaatcta 40328712  T
Q  132 --------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccac 223  Q
            |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  40328711 acccccaaaagagaaccaactcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacac 40328612  T
Q  224 tcatgtgtttcc 235  Q
    ||||||||||||    
T  40328611 tcatgtgtttcc 40328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 42435123 - 42435338
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||      
T  42435123 caaccctaatttctacccatttttccaatctcaccaatgaacaagacactcatgattttcactctcccaaagtgtttacaattgtttaccaactctagaa 42435222  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  42435223 tctaaccctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagactct 42435322  T
Q  220 ccactcatgtgtttcc 235  Q
    ||| |||| |||||||    
T  42435323 ccattcatatgtttcc 42435338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 40221781 - 40221566
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||  |||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40221781 caaccctaatttctacccattttaccaatctcaccaaagaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaa 40221682  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||||||||||    
T  40221681 tctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaagactct 40221582  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||||||||||||||    
T  40221581 ccactcatgtgtttcc 40221566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 11384021 - 11383807
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    |||||||||||||||| ||||||  ||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  11384021 caaccctaatttctacccatttttccaatctcat-aatgaacaagacactcatgattttcactctcccaaggtgtttacaattatttcccaactctagaa 11383923  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |    
T  11383922 tctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttt 11383823  T
Q  220 ccactcatgtgtttcc 235  Q
    ||||| |||| |||||    
T  11383822 ccacttatgtatttcc 11383807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 44353829 - 44353615
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||| | ||| ||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  44353829 caaccctaatttctacccattttcccaatctcacaaatgaacaagatactcaatgatttttactcacccaatgtgtttacaattgtttcccaactctaga 44353730  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            |||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||  | |||||    
T  44353729 atctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttttcttttggtttcacaagactcacccaagttgctcaccgatgactc 44353630  T
Q  219 tccactcatgtgttt 233  Q
    |||||||||||||||    
T  44353629 tccactcatgtgttt 44353615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 18655436 - 18655246
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| || |||||      
T  18655436 caaccttaatttctacccattttctcaatctcaccaatgaacaaaacactcatgattttcactctcccaaggtgtttacaattgtttcctaagtctagaa 18655337  T
Q  130 ---------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaa 211  Q
             ||||||| | |||||| |||| ||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  18655336 tctaaccccaaaagagtatcaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 10930331 - 10930424
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaact 125  Q
    |||||||||||||||  ||||||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  10930331 caaccctaatttctatccattttcccaatctcaccgatgaacaagacactcatgattttcactctcccaaaatgtttacaattgtttcccaact 10930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 15212822 - 15212730
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||    
T  15212822 caaccctaatttctacccattttcccaatctcaccaatgaacaagacattcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 15212730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 4731694 - 4731602
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  4731694 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 4731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 18141853 - 18141764
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  18141853 cctaatttctacccattttcacaatctcaccaatgaacaagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaac 18141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 30291638 - 30291549
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| || ||||| |||||||||| |||||||||||    
T  30291638 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaac 30291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 43036459 - 43036367
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  43036459 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 43036367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 1345503 - 1345597
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| | |||||||||||    
T  1345503 caaccctaatttctacacattttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttacaa-tatttcccaactc 1345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 27811314 - 27811232
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  27811314 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaat 27811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 8965825 - 8965914
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttccca 122  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||    
T  8965825 aaccctaatttctac-ctttttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 33352186 - 33352094
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||| || ||||| |||||||||| |||||||||||    
T  33352186 caaccctaatttttacccattttcccaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaa-tgtttcccaac 33352094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 40321116 - 40321022
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||||| || |||||||||| || | ||| |||||||||| |||||||||||||    
T  40321116 caaccctaatttctacccattttcccaatctcacctatgaacaagacactcaatgattttcagtcactcaaggtgtttacaa-tgtttcccaactc 40321022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 9765781 - 9765693
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||   | |||||||| ||||| |||||||||| |||||||||||    
T  9765781 caaccctaatttctacccattttcccaatctcaccaatgaacaagacactc---aatttcactcacccaaggtgtttacaa-tgtttcccaac 9765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 19491835 - 19491922
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||  |||||||||| |||||  ||||||| | |||||||||||    
T  19491835 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatattttcactcacccaagatgtttacga-tgtttcccaac 19491922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 30143376 - 30143286
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| ||||||| ||||||  |||||||||||||||   ||||||||||||| ||||| |||||||||| |||||||||||    
T  30143376 caaccctaatttctacccattttcccaatctggccaatgaacaagaca-caatgattttcactcacccaatgtgtttacaa-tgtttcccaac 30143286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 6599002 - 6598916
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| | ||| |||||||||| |||||||||||    
T  6599002 taatttctacccattttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 6598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 6674455 - 6674369
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||| | ||| |||||||||| |||||||||||    
T  6674455 taatttctacccattttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 6674369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 8153798 - 8153705
Alignment:
Q  33 aaccctaatttctacgcattttctcaatctcaccaatgaacaagaca---ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||   |  |||||||||||||  |||| |||| ||||| |||||||||||    
T  8153798 aaccctaatttctac-cattttctcaatctcaccaatgaacatgacacactcaatgattttcactcatccaaggtgtatacaaatgtttcccaac 8153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 1292601 - 1292687
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| |||||||||||||||||||| |||||||||| || || |||||||||| ||||| ||||| || | |||||||||||    
T  1292601 taatttctacccattttctcaatctcaccaaagaacaagacactcaataattttcactcacccaaggtgttcac-agtgtttcccaac 1292687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 3303808 - 3303894
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| ||||||| ||||||||||||| ||||||| | || ||||||||||||| | ||| |||||||||| |||||||||||    
T  3303808 taatttctacccattttcccaatctcaccaataaacaagatactcaatgattttcactcactcaaggtgtttacaa-tgtttcccaac 3303894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 4743345 - 4743427
Alignment:
Q  42 ttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||| ||||||  ||||||||||||||||||||||| || ||||||||| ||| ||||| |||||||||| |||||||||||    
T  4743345 ttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcgctcacccaaggtgtttacaa-tgtttcccaac 4743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 40585650 - 40585561
Alignment:
Q  130 aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctcc 221  Q
    |||||||||||||||| |||  ||||||||| ||||||||||||||||||||| |  ||| | |||||||| |||||||| |||||||||||    
T  40585650 aaaagagaaccaacccttagtctttgatttc-ctaaggatcttctcttttggtctaccaatactcacccaaattgctcac-aaagactctcc 40585561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 17982689 - 17982597
Alignment:
Q  32 caaccctaatttctacgcatttt-ctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  17982689 caaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 17982597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 34254463 - 34254543
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||||    
T  34254463 caaccctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaat 34254543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 41366752 - 41366837
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaa 123  Q
    |||||||||| ||||||||||||||||    ||||||||||| || ||||||||||||| ||||| |||||||||| ||||||||||    
T  41366752 taatttctacccattttctcaatctcagtcttgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaa 41366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 5689301 - 5689213
Alignment:
Q  38 taatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactc 126  Q
    |||||||||| ||||||  ||||||||  ||||||||||||| ||| |||||||||||| ||||| |||||||||| ||||||| |||||    
T  5689301 taatttctacccatttttccaatctcattaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttccaaactc 5689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 31218293 - 31218201
Alignment:
Q  32 caaccctaatttctacgcattttctc--aatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |||||| ||  |||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  31218293 caaccctaatttctac-cattttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 31218201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 1746370 - 1746442
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||| |||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  1746370 ttttttcaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 1746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 9633816 - 9633882
Alignment:
Q  167 gatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctccactcatgtgttt 233  Q
    ||||||||| |||||||||  || |||||||||||||||||||||| |||||||  || ||||||||    
T  9633816 gatcttctcgtttggtttcctaagattcacccaagttgctcacaaatgactctcatcttatgtgttt 9633882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 12702790 - 12702862
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagaca-ttcatgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  12702790 ttttcccaatctcaccaatgaacaagacacttaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 12702862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 34256639 - 34256700
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcac 93  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| || |||||||||||    
T  34256639 caaccctaatttctac-catttttccaatctcaccaatgaacaagacactcaatgattttcac 34256700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 44303870 - 44303798
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  44303870 ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 44303798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 33655548 - 33655628
Alignment:
Q  131 aaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaa 212  Q
    ||||||||||||||| || | ||||||||  ||||||||||||||||||| | ||  || |||||||||| |||||||||||    
T  33655548 aaagagaaccaacccttaacctttgatttt-ctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaa 33655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 41364983 - 41365071
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||||||||||  |||||| ||||||||    ||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||    
T  41364983 cctaatttctaccaattttcccaatctcagtcttgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaac 41365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 3772224 - 3772164
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactc 95  Q
    |||||||||||   |||||||||||||||||||||||||||||| || || ||||||||||    
T  3772224 cctaatttctatcaattttctcaatctcaccaatgaacaagacactcaatcattttcactc 3772164  T

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Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 19945512 - 19945574
Alignment:
Q  51 ttttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||||    
T  19945512 ttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaat 19945574  T

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Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 42498230 - 42498149
Alignment:
Q  32 caaccctaatttcta-cgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaa 112  Q
    ||||||||||||||| |   ||||| ||||||||||||||||||||||| || |||||||||||||  |||| ||||||||||    
T  42498230 caaccctaatttctacctttttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa 42498149  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 18106235 - 18106302
Alignment:
Q  57 caatctcaccaatgaacaagacattcatga-ttttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||| |||||||||||| |||  | ||||||||| ||||| |||||||||| |||||||||||    
T  18106235 caatctcaccgatgaacaagacactcaacaattttcactcacccaaggtgtttacaa-tgtttcccaac 18106302  T

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Target: scaffold0466 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 7363 - 7151
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaa 131  Q
    ||||| |||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  7363 caaccttaatttctacccatttttccaatctcaccaatgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcc-agctctagaa 7265  T
Q  132 ------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
                |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7264 tctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 7165  T
Q  220 ccactcatgtgttt 233  Q
    ||||||||||||||    
T  7164 ccactcatgtgttt 7151  T

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Target: scaffold0014 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 80415 - 80630
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactctag-- 129  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||||      
T  80415 caaccctaatttctacccattttcccaatctcagcaatgaacaagacactcatgattttcactctcccaaggtgttcacaattgtttcctaactctagaa 80514  T
Q  130 ----------aaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactct 219  Q
              |||| ||||||||||| |||| |||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||||||||||||||||    
T  80515 tctaacccccaaaatagaaccaacccttagcctttgatttcactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaagactct 80614  T
Q  220 ccactcatgtgtttcc 235  Q
    || |||||||||||||    
T  80615 ccgctcatgtgtttcc 80630  T

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Target: scaffold0176 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 18135 - 18346
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattcatgattttcactctcccaaagtgtttacaattgtttcccaactcta--- 128  Q
    ||||||||||||||||  |||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||       
T  18135 caaccctaatttctaccaattttcccactctcaccaatgaacaaaacactcatgattttcactctcccaaagtgtttacaattgttt-ccaactctataa 18233  T
Q  129 --------gaaaagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactctc 220  Q
             |||||||||||||| | |||  ||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||  ||||||    
T  18234 tctaaccccaaaagagaaccaactcttagtctttgatttcactaaggatcttctcttttggttttacaagactcactcaagttgctcacaaataactctc 18333  T
Q  221 cactcatgtgttt 233  Q
    |||||||||||||    
T  18334 cactcatgtgttt 18346  T

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Target: scaffold0286 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 11593 - 11379
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattca-tgattttcactctcccaaagtgtttacaattgtttcccaactctaga 130  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||||| ||| |||||||||||| || || ||||||||||| ||||||||||||||||    
T  11593 caaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacaat-gtttcccaactctaga 11496  T
Q  131 a------------aagagaaccaacccatagcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaaaagactc 218  Q
    |            ||||||| |||||  |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| ||| |||||    
T  11495 atctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactc 11396  T
Q  219 tccactcatgtgtttcc 235  Q
    |||||||||||||||||    
T  11395 tccactcatgtgtttcc 11379  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 114638 - 114547
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  114638 caaccttaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 114547  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 149229 - 149311
Alignment:
Q  32 caaccctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||||||||  | ||||| ||||||||| ||||||||||||| || ||||||||||||  ||||| |||||||||||    
T  149229 caaccctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttacaat 149311  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 20551 - 20629
Alignment:
Q  36 cctaatttctacgcattttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaat 113  Q
    |||||||||| | ||||||| |||||||||||||||| || | | || ||||||||||||| ||||| |||||||||||    
T  20551 cctaatttctgctcattttcccaatctcaccaatgaataataaactcaatgattttcactcacccaaggtgtttacaat 20629  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 434569 - 434504
Alignment:
Q  32 caaccctaatttctacgcattttctc-aatctcaccaatgaacaagacattc-atgattttcactc 95  Q
    |||||||||||||||| | ||||| | |||||||||||||||||||||| || |||||||||||||    
T  434569 caaccctaatttctaccctttttccccaatctcaccaatgaacaagacactcaatgattttcactc 434504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 1667 - 1729
Alignment:
Q  148 agcttttgatttcactaaggatcttctcttttggtttcacaacattcacccaagttgctcacaa 211  Q
    ||||||||||||| ||||||||||||||||||| | || ||| | || ||||||||||||||||    
T  1667 agcttttgatttc-ctaaggatcttctcttttgatctcccaagactcgcccaagttgctcacaa 1729  T

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Target: scaffold1519 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 952 - 861
Alignment:
Q  32 caaccctaatttctacgc-attttctcaatctcaccaatgaacaagacattc-atgattttcactctcccaaagtgtttacaattgtttcccaac 124  Q
    |||||||||||||||| |  ||||| |||||||||||| |||||||||| || |||||||||||||  |||| |||||||||| |||||||||||    
T  952 caaccctaatttctacccttttttcccaatctcaccaa-gaacaagacactcaatgattttcactc-accaaggtgtttacaa-tgtttcccaac 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 25032 - 25000
Alignment:
Q  88 tttcactctcccaaagtgtttacaattgtttcc 120  Q
    |||||||||||||| ||||||||||||||||||    
T  25032 tttcactctcccaaggtgtttacaattgtttcc 25000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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