View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18941_high_7 (Length: 290)
Name: NF18941_high_7
Description: NF18941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18941_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 35450217 - 35450443
Alignment:
| Q |
16 |
actaaactaatttccccaattttgtactacaactgtatggttaaactctgcacatggaaaaaggatagctaaattataactagaccttaatcataattca |
115 |
Q |
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| T |
35450217 |
actaaactaatttccccaattttgtactacaactgtatggttaaactctgcacatggaaaaaggatagctaaattataactagaccttaatcataattca |
35450316 |
T |
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| Q |
116 |
tgaatctatgatttctttatttagcagaacaaaatatcaagaatcaaatgaatattacaaatataacaactgaaatttcaatcaagttagatactgtagc |
215 |
Q |
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||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35450317 |
tgaatctttgatttctttattcagcagaacaaaatatcaagaatcaaatgaatattacaaatataacaactgaaatttcaatcaagttagatactgtagc |
35450416 |
T |
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| Q |
216 |
ataatacataaaaagtctaaggccaag |
242 |
Q |
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||||||||||||||||||||||||||| |
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| T |
35450417 |
ataatacataaaaagtctaaggccaag |
35450443 |
T |
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