View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18941_low_15 (Length: 246)
Name: NF18941_low_15
Description: NF18941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18941_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 4710220 - 4709982
Alignment:
| Q |
1 |
aatcaacctagttagcgattcaaatcacctttgtatttttggatcatgtttcttcatcagagagtcataatttaaatcgaccacgtaatgtgactcaaat |
100 |
Q |
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| T |
4710220 |
aatcaacctagttagcgattcaaatcacctttgtatttttggatcatgtttcttaatcagagagtcataatttaaatcgaccacgtaatgtgactcaaat |
4710121 |
T |
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| Q |
101 |
caacttgataaaaaatgattattcgaatccacctaataatgtgatttaaatcatgcacatgatttttcagatttttaatgcataagaattgtatactcat |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4710120 |
caacttgataaaaagtgattattcgaatccacctaataatgtgatttaaatcatgcacatgatttttcagatttttaatgcataagaattgtatactcat |
4710021 |
T |
|
| Q |
201 |
aactctgattcattctcatgttaatacttgaacattcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
4710020 |
aactctgattcattctcatgttaatacttgaacattcat |
4709982 |
T |
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