View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18944_low_1 (Length: 484)

Name: NF18944_low_1
Description: NF18944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18944_low_1
NF18944_low_1
[»] chr1 (39 HSPs)
chr1 (279-471)||(48953376-48953568)
chr1 (148-209)||(48953687-48953748)
chr1 (148-221)||(946481-946554)
chr1 (148-221)||(15467856-15467929)
chr1 (148-221)||(8224875-8224948)
chr1 (148-211)||(37036842-37036905)
chr1 (155-221)||(49216238-49216304)
chr1 (148-221)||(13181695-13181768)
chr1 (148-221)||(28632479-28632552)
chr1 (148-221)||(31166417-31166490)
chr1 (148-221)||(39887234-39887307)
chr1 (148-224)||(31195560-31195636)
chr1 (153-221)||(41822595-41822663)
chr1 (148-216)||(44570790-44570858)
chr1 (148-224)||(44571305-44571381)
chr1 (148-224)||(47820317-47820392)
chr1 (154-221)||(41822442-41822509)
chr1 (148-221)||(10166606-10166678)
chr1 (148-221)||(34003568-34003641)
chr1 (148-221)||(35491264-35491337)
chr1 (148-221)||(37447252-37447325)
chr1 (148-221)||(37447795-37447868)
chr1 (148-211)||(41823053-41823116)
chr1 (148-210)||(21267704-21267766)
chr1 (153-210)||(49659334-49659391)
chr1 (148-216)||(23956255-23956323)
chr1 (148-224)||(52135518-52135594)
chr1 (150-204)||(32201893-32201947)
chr1 (153-221)||(37448299-37448368)
chr1 (159-211)||(947030-947082)
chr1 (162-210)||(32128148-32128196)
chr1 (170-224)||(42230825-42230879)
chr1 (160-221)||(6470591-6470652)
chr1 (165-221)||(41481335-41481391)
chr1 (154-198)||(43619776-43619820)
chr1 (153-224)||(1902165-1902236)
chr1 (155-221)||(50471857-50471923)
chr1 (150-216)||(51847963-51848028)
chr1 (148-208)||(4937202-4937262)
[»] chr7 (32 HSPs)
chr7 (148-221)||(26416060-26416133)
chr7 (148-221)||(30587782-30587855)
chr7 (148-224)||(40495821-40495897)
chr7 (148-221)||(14603141-14603214)
chr7 (148-224)||(30524359-30524435)
chr7 (148-221)||(28539047-28539120)
chr7 (148-221)||(35455911-35455984)
chr7 (148-221)||(39342521-39342594)
chr7 (148-221)||(40667448-40667521)
chr7 (148-224)||(22391467-22391543)
chr7 (148-224)||(23696010-23696086)
chr7 (148-211)||(23548490-23548553)
chr7 (154-221)||(33310911-33310978)
chr7 (148-221)||(40495337-40495410)
chr7 (148-224)||(14790217-14790293)
chr7 (154-210)||(19865439-19865495)
chr7 (158-221)||(9784820-9784883)
chr7 (148-221)||(13814873-13814946)
chr7 (148-221)||(30080680-30080753)
chr7 (148-221)||(30629164-30629237)
chr7 (150-221)||(3905540-3905611)
chr7 (148-211)||(18938891-18938954)
chr7 (148-210)||(36328674-36328737)
chr7 (149-221)||(25189106-25189178)
chr7 (165-221)||(42816656-42816712)
chr7 (148-224)||(45967051-45967127)
chr7 (170-221)||(23455148-23455199)
chr7 (175-221)||(18926727-18926773)
chr7 (175-221)||(45984447-45984493)
chr7 (175-221)||(45988807-45988853)
chr7 (170-221)||(32650680-32650731)
chr7 (165-221)||(43791197-43791253)
[»] scaffold0318 (1 HSPs)
scaffold0318 (148-221)||(2973-3046)
[»] chr8 (34 HSPs)
chr8 (148-221)||(29257254-29257327)
chr8 (148-221)||(40734004-40734077)
chr8 (148-221)||(26520342-26520415)
chr8 (148-221)||(31980386-31980459)
chr8 (148-221)||(33986111-33986184)
chr8 (148-221)||(14345-14418)
chr8 (148-221)||(29482710-29482783)
chr8 (148-221)||(33377200-33377273)
chr8 (148-221)||(34008888-34008961)
chr8 (152-221)||(44346585-44346654)
chr8 (148-211)||(1088179-1088243)
chr8 (148-224)||(9982740-9982816)
chr8 (148-216)||(15186720-15186788)
chr8 (154-221)||(24045067-24045134)
chr8 (148-210)||(13144701-13144763)
chr8 (148-221)||(7079437-7079510)
chr8 (158-221)||(36625138-36625201)
chr8 (155-221)||(6416291-6416357)
chr8 (148-205)||(29611483-29611540)
chr8 (148-224)||(33422907-33422984)
chr8 (155-224)||(35404652-35404721)
chr8 (148-224)||(7668743-7668819)
chr8 (156-208)||(10593191-10593243)
chr8 (173-211)||(8049371-8049409)
chr8 (148-221)||(15718304-15718377)
chr8 (148-221)||(28324565-28324638)
chr8 (153-221)||(6460794-6460862)
chr8 (155-211)||(24063706-24063762)
chr8 (176-224)||(24510208-24510256)
chr8 (170-221)||(31976507-31976558)
chr8 (165-211)||(10794994-10795040)
chr8 (186-224)||(34388611-34388649)
chr8 (180-224)||(35978942-35978986)
chr8 (154-210)||(43167781-43167836)
[»] chr6 (10 HSPs)
chr6 (148-221)||(8475268-8475341)
chr6 (148-211)||(1195450-1195513)
chr6 (153-221)||(9697569-9697637)
chr6 (148-221)||(31413008-31413081)
chr6 (165-224)||(15616271-15616330)
chr6 (154-224)||(10105143-10105212)
chr6 (154-224)||(26901663-26901733)
chr6 (148-221)||(1368584-1368656)
chr6 (153-221)||(28918272-28918339)
chr6 (148-211)||(6358144-6358207)
[»] chr5 (32 HSPs)
chr5 (148-221)||(6772103-6772176)
chr5 (148-221)||(12480014-12480087)
chr5 (148-221)||(40089707-40089780)
chr5 (148-221)||(41762105-41762178)
chr5 (148-211)||(927418-927481)
chr5 (153-211)||(35379459-35379517)
chr5 (148-221)||(8264615-8264688)
chr5 (148-221)||(15270744-15270817)
chr5 (148-221)||(22303760-22303833)
chr5 (148-221)||(33146280-33146353)
chr5 (148-224)||(17542251-17542327)
chr5 (153-224)||(28489567-28489638)
chr5 (148-221)||(10314756-10314829)
chr5 (148-209)||(22768186-22768247)
chr5 (148-221)||(35111333-35111406)
chr5 (148-224)||(11409285-11409361)
chr5 (153-224)||(32249993-32250064)
chr5 (148-211)||(34105188-34105251)
chr5 (148-210)||(9894212-9894274)
chr5 (148-211)||(8674368-8674430)
chr5 (148-210)||(11601156-11601217)
chr5 (158-210)||(30519121-30519173)
chr5 (158-210)||(30559461-30559513)
chr5 (157-224)||(21541470-21541537)
chr5 (170-221)||(37241510-37241561)
chr5 (170-221)||(14834931-14834982)
chr5 (165-216)||(31316273-31316324)
chr5 (154-221)||(37090722-37090789)
chr5 (148-205)||(24402682-24402740)
chr5 (148-189)||(6955376-6955417)
chr5 (173-210)||(9894067-9894104)
chr5 (165-221)||(17444337-17444393)
[»] chr3 (41 HSPs)
chr3 (148-221)||(48947712-48947785)
chr3 (148-221)||(53129735-53129808)
chr3 (148-224)||(7976652-7976728)
chr3 (148-221)||(26547122-26547195)
chr3 (148-221)||(36397881-36397954)
chr3 (148-221)||(43863843-43863916)
chr3 (148-221)||(53470321-53470394)
chr3 (148-210)||(34396402-34396464)
chr3 (153-211)||(52527153-52527211)
chr3 (148-221)||(671511-671584)
chr3 (148-221)||(2104841-2104914)
chr3 (148-221)||(34088678-34088751)
chr3 (148-221)||(37054501-37054574)
chr3 (148-221)||(42005845-42005918)
chr3 (148-221)||(46635953-46636026)
chr3 (148-224)||(36635986-36636062)
chr3 (148-211)||(21307424-21307487)
chr3 (148-211)||(44288351-44288414)
chr3 (154-224)||(21731005-21731075)
chr3 (154-211)||(6836957-6837014)
chr3 (148-221)||(7302453-7302526)
chr3 (148-210)||(30767412-30767476)
chr3 (148-221)||(46706759-46706832)
chr3 (148-221)||(47767539-47767612)
chr3 (165-221)||(26323463-26323519)
chr3 (148-211)||(30766670-30766733)
chr3 (148-211)||(47336998-47337061)
chr3 (148-221)||(31021787-31021860)
chr3 (165-221)||(35279831-35279887)
chr3 (153-224)||(32665989-32666060)
chr3 (154-221)||(38506774-38506841)
chr3 (148-224)||(28182138-28182213)
chr3 (157-224)||(20634312-20634379)
chr3 (154-211)||(40493186-40493243)
chr3 (160-221)||(55460447-55460508)
chr3 (148-216)||(15760374-15760442)
chr3 (180-224)||(45098241-45098285)
chr3 (150-209)||(1146839-1146897)
chr3 (170-221)||(47284117-47284168)
chr3 (153-224)||(48825024-48825095)
chr3 (158-216)||(31189299-31189357)
[»] chr2 (43 HSPs)
chr2 (148-221)||(1583702-1583775)
chr2 (148-221)||(7309656-7309729)
chr2 (148-221)||(11141412-11141485)
chr2 (148-221)||(39630331-39630404)
chr2 (149-221)||(44255741-44255813)
chr2 (148-211)||(3092399-3092462)
chr2 (148-221)||(769143-769216)
chr2 (148-221)||(8736334-8736407)
chr2 (148-221)||(32840085-32840158)
chr2 (148-221)||(33189150-33189223)
chr2 (148-221)||(45094364-45094437)
chr2 (153-221)||(12263533-12263601)
chr2 (150-221)||(28021999-28022070)
chr2 (148-211)||(35047572-35047635)
chr2 (149-211)||(740821-740883)
chr2 (148-221)||(7167560-7167633)
chr2 (148-221)||(28740703-28740776)
chr2 (148-224)||(14306700-14306776)
chr2 (148-211)||(20935823-20935886)
chr2 (148-210)||(1730170-1730232)
chr2 (148-209)||(2274682-2274743)
chr2 (148-221)||(6749264-6749337)
chr2 (148-221)||(7611781-7611854)
chr2 (148-221)||(30698388-30698461)
chr2 (148-205)||(32839541-32839598)
chr2 (151-211)||(11595406-11595466)
chr2 (148-224)||(41585583-41585659)
chr2 (154-221)||(7227911-7227978)
chr2 (148-210)||(21504568-21504629)
chr2 (154-211)||(11607308-11607365)
chr2 (148-221)||(13017886-13017958)
chr2 (148-221)||(17905760-17905832)
chr2 (163-211)||(42941050-42941098)
chr2 (148-211)||(11606831-11606894)
chr2 (148-223)||(31613919-31613994)
chr2 (158-224)||(11036446-11036512)
chr2 (156-224)||(767277-767345)
chr2 (156-223)||(2701877-2701943)
chr2 (148-211)||(11594926-11594989)
chr2 (165-221)||(2924831-2924887)
chr2 (148-209)||(29278910-29278971)
chr2 (153-221)||(44205555-44205624)
chr2 (152-192)||(14404910-14404950)
[»] chr4 (34 HSPs)
chr4 (148-224)||(47108384-47108460)
chr4 (148-221)||(2125964-2126037)
chr4 (148-221)||(16516279-16516352)
chr4 (148-221)||(35470229-35470302)
chr4 (148-211)||(26534610-26534673)
chr4 (148-211)||(42776136-42776199)
chr4 (148-221)||(29091244-29091317)
chr4 (153-221)||(13088623-13088691)
chr4 (148-224)||(53760683-53760759)
chr4 (148-207)||(13318552-13318611)
chr4 (148-210)||(10354460-10354522)
chr4 (163-224)||(27284570-27284631)
chr4 (148-221)||(40338145-40338218)
chr4 (148-224)||(24705455-24705531)
chr4 (148-224)||(41139577-41139653)
chr4 (149-221)||(46242991-46243063)
chr4 (148-224)||(54566279-54566355)
chr4 (158-221)||(46242447-46242510)
chr4 (149-224)||(52494028-52494102)
chr4 (148-210)||(52294938-52295000)
chr4 (148-221)||(4490134-4490207)
chr4 (153-221)||(56339240-56339308)
chr4 (148-211)||(17727182-17727245)
chr4 (155-221)||(42776744-42776810)
chr4 (148-221)||(29685969-29686042)
chr4 (156-211)||(42775722-42775780)
chr4 (150-212)||(18922467-18922529)
chr4 (148-221)||(24062878-24062951)
chr4 (154-211)||(30303838-30303895)
chr4 (165-221)||(40548128-40548184)
chr4 (165-224)||(17727032-17727091)
chr4 (170-216)||(16300133-16300179)
chr4 (163-213)||(30303210-30303260)
chr4 (163-211)||(39904636-39904684)
[»] scaffold0400 (1 HSPs)
scaffold0400 (148-221)||(4391-4464)
[»] scaffold0365 (1 HSPs)
scaffold0365 (148-221)||(5035-5108)
[»] scaffold0014 (2 HSPs)
scaffold0014 (148-221)||(221089-221162)
scaffold0014 (148-221)||(223642-223715)
[»] scaffold0129 (1 HSPs)
scaffold0129 (148-221)||(19678-19751)
[»] scaffold0417 (1 HSPs)
scaffold0417 (148-224)||(11848-11925)
[»] scaffold0301 (1 HSPs)
scaffold0301 (152-221)||(7258-7327)
[»] scaffold0047 (1 HSPs)
scaffold0047 (148-221)||(50200-50273)
[»] scaffold0169 (1 HSPs)
scaffold0169 (154-221)||(4182-4248)
[»] scaffold0039 (1 HSPs)
scaffold0039 (148-211)||(109147-109210)
[»] scaffold0337 (2 HSPs)
scaffold0337 (159-210)||(15770-15821)
scaffold0337 (170-224)||(16289-16343)
[»] scaffold0065 (2 HSPs)
scaffold0065 (159-210)||(2812-2863)
scaffold0065 (170-221)||(9501-9552)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 279 - 471
Target Start/End: Complemental strand, 48953568 - 48953376
Alignment:
Q  279 actgtaattcgtacatggaatcggtgaaataaaattatgaacaaataatatttgtgacatagtaatccatggcacatctggcagttttcttcaccaggcg 378  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48953568 actgtaattcatacatggaatcggtgaaataaaattatgaacaaataatatttgtgacatagtaatccatggcacatctggcagttttcttcaccaggtg 48953469  T
Q  379 ctggttggttccaaattagattgatgaaaaagttatcattgaggtatttgccaaatccacgagatgaatcataagtagtgacatggacattga 471  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48953468 ttggttggttccaaattagattgatgaaaaagttatcattgaggtatttgccaactccacgagatgaatcataagtagtgacatggacattga 48953376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 48953748 - 48953687
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48953748 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 48953687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 946554 - 946481
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  946554 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 946481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 15467856 - 15467929
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  15467856 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 15467929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 8224948 - 8224875
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  8224948 cttaccttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 8224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 37036842 - 37036905
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  37036842 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 37036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 49216238 - 49216304
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  49216238 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 49216304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 13181768 - 13181695
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  13181768 cttaacttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 13181695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 28632479 - 28632552
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  28632479 cttaacttttagatgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcatttt 28632552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 31166490 - 31166417
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  31166490 cttagcttttagatgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcatttt 31166417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 39887307 - 39887234
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  39887307 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 39887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 31195636 - 31195560
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||  ||| |||||||    
T  31195636 cttagctttcaggtgtcatttcaaattctttaaatttgactttaacaaaatacttcgtaaatttttatcattttaaa 31195560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 41822595 - 41822663
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  41822595 cttttaggtgtcatttgaaattctctaattttaacttgaacaaaatacttcataaatttccatcatttt 41822663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 44570858 - 44570790
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| ||||    
T  44570858 cttaacttttaggtgtcatttgaaattctctatatttaacttgaacaaaatacttcataaatttccatc 44570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 44571381 - 44571305
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  44571381 cttaacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatactttataaatttccatcattttaaa 44571305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 47820392 - 47820317
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||| |||||||    
T  47820392 cttaacttttaggtgtcatttgaaattc-ctaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 47820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 41822442 - 41822509
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  41822442 ttttaggtgtcatttgaaattctctaattttaacttgaacaaaatacttcataaatttccatcatttt 41822509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 10166678 - 10166606
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||| |||||||||    
T  10166678 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaataaaatacttcataaattt-catcgtttt 10166606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 34003641 - 34003568
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| |||| ||||    
T  34003641 cttaacttttaggtgttattttaaattctctaaatttaacttgaacaaaatatttcataaatttccatcatttt 34003568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 35491337 - 35491264
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||| |||| ||||    
T  35491337 cttaacttttaagtgtcatttgaaattctctaaatttaacttgagcaaaatacttcataaatttccatcatttt 35491264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 37447252 - 37447325
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||| ||||    
T  37447252 cttaactttttggtgtcatttgaaattctctaaatttaacttgaaccaaatacttcataaatttccatcatttt 37447325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 37447795 - 37447868
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  37447795 cttaacttttaggtgtcatttgaatttctctacatttaacttgaacaaaatacttcataaatttccatcatttt 37447868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 41823053 - 41823116
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| ||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||    
T  41823053 cttaacttttaggtgttatttgaaattctctacatttaacttgaacaaaatacttcataaattt 41823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 21267704 - 21267766
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||    
T  21267704 cttaacttttaggtgtcatttgaaattctctaaatttaaattgaacaaaattcttcataaatt 21267766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 49659391 - 49659334
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  49659391 cttttagatgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatt 49659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 23956255 - 23956323
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||| |||||| ||||||||| ||||||||||||||| ||||||| ||||||||| |||||||| ||||    
T  23956255 cttaacttttatgtgtcatttgaaattctctaaatttaacttgaataaaatactttataaatttccatc 23956323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 52135518 - 52135594
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||  ||||||| |||||||| || ||| |||||||||||||||||||||||||| |||| |||||||    
T  52135518 cttaacttttagacgtcatttgaaattctcaaactttaacttgaacaaaatacttcataaatttccatcattttaaa 52135594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 32201947 - 32201893
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttca 204  Q
    ||||||||||||||||||| |||||||||| |||| ||| |||||||||||||||    
T  32201947 tagcttttaggtgtcatttgaaattctctatatttaactagaacaaaatacttca 32201893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 37448299 - 37448368
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaa-atacttcataaatttacatcgtttt 221  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||||| ||||||||||||||| |||| ||||    
T  37448299 cttttagatgtcatttgaaattctttaaatttaacttgaacaaatatacttcataaatttccatcatttt 37448368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 947082 - 947030
Alignment:
Q  159 ggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||| ||||||| ||||||| |||||||||||||| |||||||||||    
T  947082 ggtgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaattt 947030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 32128196 - 32128148
Alignment:
Q  162 gtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  32128196 gtcatttgaaattctctaaatttaacttgaacaaaatacctcataaatt 32128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 42230879 - 42230825
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||||| |||| ||||| ||||||||||||||| |||| |||||||    
T  42230879 aaattctctaaatttaacttaaacaagatacttcataaatttccatcattttaaa 42230825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 6470591 - 6470652
Alignment:
Q  160 gtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||| ||||||||||||||| ||||||||||| |  ||||||||||| |||| ||||    
T  6470591 gtgtcatttgaaattctctaaatttaacttgaacaaattttttcataaatttccatcatttt 6470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 41481335 - 41481391
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||| | ||||||| || |||||||||||||||||||||||||||| ||||    
T  41481335 atttgaaattatttaaatttaacctgaacaaaatacttcataaatttacatcatttt 41481391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 43619776 - 43619820
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaat 198  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  43619776 ttttaggtgtcatttgaaattctctaattttaacttgaacaaaat 43619820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 1902236 - 1902165
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||||||| |||||||| |||||| ||||  | ||||||| |||| ||||| |||| |||||||    
T  1902236 cttttaggtgtcatttgaaattctcaaaattttacttcgagaaaatacctcatgaatttccatcattttaaa 1902165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 50471923 - 50471857
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| ||||| ||||||||| | || |||||||||||||| |||||| |||| ||||    
T  50471923 tttatgtgtcatttgaaattttctaaatttaatttcaacaaaatacttcaaaaatttccatcatttt 50471857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 51848028 - 51847963
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    ||||||||||||||||||| ||||||  |||| || |||| |||||||||||| |||||||| ||||    
T  51848028 tagcttttaggtgtcatttgaaattccataaa-ttaacttaaacaaaatacttgataaatttccatc 51847963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 4937262 - 4937202
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaa 208  Q
    ||||| |||||||||  |||| ||||||||||||||||||||  |  ||||||||||||||    
T  4937262 cttagtttttaggtgatatttgaaattctctaaatttgactttgatgaaatacttcataaa 4937202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 26416133 - 26416060
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  26416133 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcctaaatttccatcatttt 26416060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 30587782 - 30587855
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  30587782 cttagcttttaggtgtcatttaaaattctctaaatttgacttgaacaaaatacttcataaatttccatcatttt 30587855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 40495897 - 40495821
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  40495897 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 40495821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 14603141 - 14603214
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  14603141 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 14603214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 30524435 - 30524359
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  30524435 cttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 30524359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 28539047 - 28539120
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  28539047 cttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttccatcatttt 28539120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 35455984 - 35455911
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  35455984 cttagcttttaggtgtcatttaaaattctctaaatttaacttcaacaaaatacttcataaatttccatcatttt 35455911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 39342521 - 39342594
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  39342521 cttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 39342594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 40667521 - 40667448
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  40667521 cttagcttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 40667448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 22391467 - 22391543
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||    
T  22391467 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcagaaatttccatcattttaaa 22391543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 23696086 - 23696010
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  23696086 cttagcttttagatgtcatttgaaattttctaaatttaacttgaacaaaatactttataaattttcatcgttttaaa 23696010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 23548490 - 23548553
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  23548490 cttagcttttaggtgtcatttgaaattttctaaatttaacttgaacaaaatacttcataaattt 23548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 33310978 - 33310911
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  33310978 ttttaggtgtcattttaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 33310911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 40495410 - 40495337
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  40495410 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 40495337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 14790293 - 14790217
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  14790293 cttaacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatactttataaattttcatcattttaaa 14790217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 19865439 - 19865495
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  19865439 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatt 19865495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 9784820 - 9784883
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  9784820 aggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 9784883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 13814873 - 13814946
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  13814873 cttaacttttagatgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 13814946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 30080680 - 30080753
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  30080680 cttaacttttaggtgtcatttgaaattttctaaatttaacttaaacaaaatacttcataaatttccatcatttt 30080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 30629237 - 30629164
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  30629237 cttagtttttaggtgtcatttgaaattttctaaatttaacttgaaaaaaatacttcataaatttccatcatttt 30629164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 3905540 - 3905611
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||| | |||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| ||||    
T  3905540 tagctttttgctgtcatttgaaattctctaaatttaacttgaacaaaataattcataaattttcatcatttt 3905611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 18938891 - 18938954
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||    
T  18938891 cttaacttttaggtgtcatttgagattctctaaatttaatttgaacaaaatacttcataaattt 18938954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 36328674 - 36328737
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgactt-gaacaaaatacttcataaatt 210  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  36328674 cttagcttttaggtgtcatttgaaattctctgaatttaacttagaacaaaatacttcataaatt 36328737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 25189106 - 25189178
Alignment:
Q  149 ttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||| || ||||||||||||||| |||||||||||||||||| ||||||| |||| ||||    
T  25189106 ttagtttttagatgtcacttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcatttt 25189178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 42816712 - 42816656
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  42816712 atttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcatttt 42816656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 45967127 - 45967051
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||| |||||| |||| ||| ||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||    
T  45967127 cttagtttttagttgtcgtttgaaattctttaaatttaacttgaacaaaatatttcataaattttcatcattttaaa 45967051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 23455148 - 23455199
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  23455148 aaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 23455199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 18926727 - 18926773
Alignment:
Q  175 ctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  18926727 ctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 18926773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 45984493 - 45984447
Alignment:
Q  175 ctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  45984493 ctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 45984447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 45988853 - 45988807
Alignment:
Q  175 ctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  45988853 ctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 45988807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 32650731 - 32650680
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  32650731 aaattatctaaatttaacttgaaaaaaatacttcataaatttccatcatttt 32650680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 43791253 - 43791197
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||| |||||||| ||||||||  ||||||| |||| ||||    
T  43791253 atttgaaattctctaaatttaacttgaaccaaatacttattaaatttccatcatttt 43791197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 3046 - 2973
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  3046 cttagctttaaggtgtcatttcaaattctctaaatttgacttgaacaaaatatttcataaatttccatcatttt 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 29257254 - 29257327
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  29257254 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 29257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 40734004 - 40734077
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  40734004 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 40734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 26520342 - 26520415
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  26520342 cttagctttaaagtgtcatttcaaattctctaaatttgacttgaataaaatacttcataaatttccatcatttt 26520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 31980386 - 31980459
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  31980386 cttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 31980459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 33986184 - 33986111
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||| ||||    
T  33986184 cttaacttttaggtgtcatttcaaattctctaaatttgacttgaccaaaatacttcatgaatttccatcatttt 33986111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 14418 - 14345
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| ||||    
T  14418 cttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaagatacttcataaatttccatcatttt 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 29482710 - 29482783
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  29482710 cttagtttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 29482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 33377200 - 33377273
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||| ||||    
T  33377200 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcatttt 33377273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 34008961 - 34008888
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  34008961 cttaacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 34008888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 44346585 - 44346654
Alignment:
Q  152 gcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  44346585 gcttttaggtgtcatttgaaattctctaaatttaacttcaacaaaatacttcataaatttccatcatttt 44346654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 1088179 - 1088243
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaattt-gacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  1088179 cttagcttttaggtgtcatttgaaattctctaaatttaaacttgaacaaaatacttcataaattt 1088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 9982816 - 9982740
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||| |||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||    
T  9982816 cttagtttttagatgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaattttcatcattttaaa 9982740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 15186720 - 15186788
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  15186720 cttaacttttaggtgtcatttaaaaatctctaaatttaacttgaacaaaatacttcataaatttccatc 15186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 24045134 - 24045067
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  24045134 ttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcatttt 24045067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 13144763 - 13144701
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  13144763 cttaccttttaggtgtcatttgaaattctctaaattgaacttgaacaaaatacttcataaatt 13144701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 7079510 - 7079437
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||||||||    
T  7079510 cttaacttttaggtatcatttgaaattctctaaatttaacttgaataaaatacttcttaaattttcatcgtttt 7079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 36625138 - 36625201
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||| |||| ||||    
T  36625138 aggtgtcatttgaaattctttaaatttaacttgatcaaaatacttcataaatttccatcatttt 36625201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 6416357 - 6416291
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| ||||| ||||||||| | |||||||||||||||||||||||| |||| ||||    
T  6416357 tttaagtgtcatttgaaattttctaaatttaagttgaacaaaatacttcataaatttccatcatttt 6416291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 29611540 - 29611483
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcat 205  Q
    ||||||||||| |||| |||| ||||||||||||||| |||||||||||||| |||||    
T  29611540 cttagcttttaagtgttatttgaaattctctaaatttaacttgaacaaaatatttcat 29611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 33422907 - 33422984
Alignment:
Q  148 cttagcttttaggtgtcatttcaaa-ttctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||| |||||||||||| | ||| |||||||| |||||||||||||| | |||||||    
T  33422907 cttatcttttaggtgtcatttgaaaattctctaaatttaatttggacaaaatagttcataaatttacaccattttaaa 33422984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 35404652 - 35404721
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||||  |||||| | ||||| ||||||||||||||||||||||||||  ||| |||||||    
T  35404652 tttaggtgtcatttgtaattctttgaatttaacttgaacaaaatacttcataaatttctatcattttaaa 35404721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 7668819 - 7668743
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||| ||||||||| ||||||||| ||||  |||| ||||||||| ||||||||||| |||| |||||||    
T  7668819 cttaccttttaagtgtcatttgaaattctcttaattaaacttaaacaaaatatttcataaatttccatctttttaaa 7668743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 10593243 - 10593191
Alignment:
Q  156 ttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaa 208  Q
    |||||||| |||| ||||||||||||||| |||||||||||||| ||||||||    
T  10593243 ttaggtgttatttgaaattctctaaatttaacttgaacaaaatatttcataaa 10593191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 8049409 - 8049371
Alignment:
Q  173 ttctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  8049409 ttctctaaatttaacttgaacaaaatacttcataaattt 8049371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 15718377 - 15718304
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||| | |||||| ||||| ||||||||| |||| |||||||| |||| ||||||| |||| ||||    
T  15718377 cttagcttttagatatcatttgaaattatctaaatttaacttaaacaaaatccttcctaaattttcatcatttt 15718304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 28324565 - 28324638
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| |||||| || ||| ||| |||| ||||||||||||||| |||||||||| |||| ||||    
T  28324565 cttaacttttaggtttcatttgaatttccctacatttaacttgaacaaaatacctcataaatttccatcatttt 28324638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 6460794 - 6460862
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||| || || | ||||||| |||||||||||||| ||||||||||| |||| ||||    
T  6460794 ctttcaggtgtcatttgaacttatttaaatttaacttgaacaaaataattcataaatttccatcatttt 6460862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 24063706 - 24063762
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||||| | ||||||||||||||| || ||||||||||| | |||||||||    
T  24063706 tttaggtgtcatatgaaattctctaaatttaacctgaacaaaatattgcataaattt 24063762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 24510208 - 24510256
Alignment:
Q  176 tctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||||||    
T  24510208 tctaaatttaactttaacaaaatacttcataaatttccatcattttaaa 24510256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 31976507 - 31976558
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| | ||||| |||||||||||||||||| |||| ||||    
T  31976507 aaattctctaaatttaatttgaataaaatacttcataaatttccatcatttt 31976558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 10794994 - 10795040
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  10794994 atttgaaattctctaaatttaacttgtacaaaatactttataaattt 10795040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 34388649 - 34388611
Alignment:
Q  186 acttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  34388649 acttgaacaaaatacttcataaatttccatcattttaaa 34388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 35978942 - 35978986
Alignment:
Q  180 aatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||    
T  35978942 aatttaacttgaacaaaatacttcataaattcccatcattttaaa 35978986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 43167836 - 43167781
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||||||||||| ||||| ||||||||| |||| ||||| |||||||| |||||    
T  43167836 ttttaggtgtcatttgaaattgtctaaattt-actttaacaagatacttcaaaaatt 43167781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 8475341 - 8475268
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  8475341 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 8475268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 1195513 - 1195450
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1195513 cttaacttttaggtgtcatttgaaattctctaaatttgacttgaacaaaatacttcataaattt 1195450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 9697637 - 9697569
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  9697637 cttttcggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcatttt 9697569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 31413081 - 31413008
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| |||| ||||    
T  31413081 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaactaaatacttcataaatttccatcatttt 31413008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 15616271 - 15616330
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  15616271 atttaaaattctctaaatttaacttgaacaaaatacttcataaatttgcatcattttaaa 15616330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 10105212 - 10105143
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||| |||| |||| |||||||    
T  10105212 ttttaggtgtcattg-aaattctctaaatttaacttgaataaaatacttcatacatttccatcattttaaa 10105143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 26901663 - 26901733
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||| |||||||| ||||||  ||||||| ||||||||||||||||||||||||||  ||| |||||||    
T  26901663 ttttagatgtcatttgaaattcaataaatttaacttgaacaaaatacttcataaatttctatcattttaaa 26901733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 1368656 - 1368584
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |||| ||||    
T  1368656 cttaacttttaagtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcatttt 1368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 28918339 - 28918272
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| |||| ||||    
T  28918339 cttttaggtgtcatttgaaattctctgaatttaacttgaac-aaatatttcataaatttccatcatttt 28918272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 6358144 - 6358207
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||| ||||||||||| ||||| ||||||| ||| ||||||||    
T  6358144 cttatcttttaggtgtcatttgaaactctctaaatttaacttggacaaaatgcttaataaattt 6358207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 6772103 - 6772176
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6772103 cttagcttttacgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcgtttt 6772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 12480087 - 12480014
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||    
T  12480087 cttagcttttaggtgtcatttcaaattctctaaatttgtcttgaacaaaatacttcatgaatttccatcatttt 12480014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 40089707 - 40089780
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  40089707 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 40089780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 41762105 - 41762178
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  41762105 cttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 41762178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 927481 - 927418
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  927481 cttagcttttaggtgtcatttgaaatcctctaaatttaacttgaacaaaatacttcataaattt 927418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 35379517 - 35379459
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  35379517 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 35379459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 8264688 - 8264615
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  8264688 cttaacttttaggtgtcatttaaaattctctaaatttaacttgaataaaatacttcataaatttccatcatttt 8264615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 15270744 - 15270817
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  15270744 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaatttccatcatttt 15270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 22303760 - 22303833
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  22303760 cttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcatttt 22303833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 33146353 - 33146280
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  33146353 cttaacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 33146280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 17542251 - 17542327
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  17542251 cttaacttttagatgtcatttgaaattctctaaattcaacttgaacaaaatacttcataaatttccatcattttaaa 17542327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 28489638 - 28489567
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||    
T  28489638 cttttagatgtcatttgaaattctctaaatttaacttgaacaaactacttcataaatttccatcattttaaa 28489567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 10314829 - 10314756
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||    
T  10314829 cttaacttttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatcatttt 10314756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 22768247 - 22768186
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 209  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  22768247 cttaacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatacttcataaat 22768186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 35111406 - 35111333
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||    
T  35111406 cttaacttttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatcatttt 35111333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 11409361 - 11409285
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||| ||||||||| ||||||| ||||||| ||||| ||||||||||||| |||||| |||| |||||||    
T  11409361 cttagcttttaagtgtcatttgaaattctttaaatttaacttggacaaaatacttcacaaatttccatcattttaaa 11409285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 32249993 - 32250064
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||  |||| |||||||    
T  32249993 cttttaggtgtcatttaaaattctttaaatttaacttgaataaaatacttcataaattaccatcattttaaa 32250064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 34105251 - 34105188
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||    
T  34105251 cttaacttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcgtaaattt 34105188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 9894212 - 9894274
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| || |||||| ||||| |||||||||||||||||||||||||    
T  9894212 cttaccttttaggtgtcatttgaatttctctgaatttaacttgaacaaaatacttcataaatt 9894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 8674368 - 8674430
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  8674368 cttagtttttatgtgtcatttgaaattctctaaatttaacttgaacaaaata-ttcataaattt 8674430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 11601217 - 11601156
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||| |||||    
T  11601217 cttagcttttaggtgtaattt-aaattgtctaaatttaacttgaacaaaatacttcagaaatt 11601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 30519173 - 30519121
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||||||| ||||||| ||||||  |||||||||||||||||||||||||    
T  30519173 aggtgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaatt 30519121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 30559513 - 30559461
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||||||| ||||||| ||||||  |||||||||||||||||||||||||    
T  30559513 aggtgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaatt 30559461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 21541470 - 21541537
Alignment:
Q  157 taggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||| ||||||||||||||| ||||| |||||||| |||||| ||||  ||| |||||||    
T  21541470 taggtgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatcattttaaa 21541537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 37241510 - 37241561
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  37241510 aaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 37241561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 14834982 - 14834931
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||  |||||| |||||||||||||||||| |||| ||||    
T  14834982 aaattctctaaatttagcttgaaaaaaatacttcataaattttcatcatttt 14834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 31316324 - 31316273
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||| ||||||||||||||| |||| |||||||| |||||||||||| ||||    
T  31316324 atttgaaattctctaaatttaacttaaacaaaatgcttcataaatttccatc 31316273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 37090789 - 37090722
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||  ||| ||||||| ||||||| ||||||| ||||||||||||||| || |||| ||||    
T  37090789 ttttaggtgtggtttaaaattctataaatttaacttgaataaaatacttcataaaattccatcatttt 37090722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 24402682 - 24402740
Alignment:
Q  148 cttagcttttaggtgtcatttc-aaattctctaaatttgacttgaacaaaatacttcat 205  Q
    ||||||||||| |||||||||  ||||||||||||||| |||| || ||||||||||||    
T  24402682 cttagcttttatgtgtcattttgaaattctctaaatttaacttaaataaaatacttcat 24402740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 6955376 - 6955417
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgactt 189  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  6955376 cttagctttttggtgtcatttgaaattctctaaatttaactt 6955417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 9894067 - 9894104
Alignment:
Q  173 ttctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  9894067 ttctataaatttaacttgaacaaaatacttcataaatt 9894104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 17444337 - 17444393
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||| |||   |||||||||||||||||||| |||| ||||    
T  17444337 atttgaaattctctaaatttaactcagacaaaatacttcataaatttccatcatttt 17444393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 48947785 - 48947712
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  48947785 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 48947712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 53129735 - 53129808
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  53129735 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcatttt 53129808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 7976728 - 7976652
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  7976728 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 7976652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 26547195 - 26547122
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  26547195 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 26547122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 36397881 - 36397954
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  36397881 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 36397954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 43863843 - 43863916
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  43863843 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 43863916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 53470321 - 53470394
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  53470321 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 53470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 34396402 - 34396464
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34396402 cttaccttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatt 34396464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 52527211 - 52527153
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  52527211 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 52527153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 671511 - 671584
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  671511 cttagtttttagatgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 671584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 2104914 - 2104841
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  2104914 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 2104841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 34088751 - 34088678
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  34088751 cttagtttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaatttccatcatttt 34088678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 37054574 - 37054501
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  37054574 cttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcatttt 37054501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 42005845 - 42005918
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  42005845 cttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaattttcatcatttt 42005918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 46636026 - 46635953
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||| |||| ||||    
T  46636026 cttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatgcttcataaattttcatcatttt 46635953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 36636062 - 36635986
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||| |||| |||||||    
T  36636062 cttaacttttaggtgtcatttataattctctaaatttaacttgaacaaaatccttcataaatttccatcattttaaa 36635986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 21307424 - 21307487
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  21307424 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaattt 21307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 44288351 - 44288414
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  44288351 cttagctttttggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaattt 44288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 21731075 - 21731005
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||    
T  21731075 ttttagatgtcatttgaaattctctaaatttaacttgaacaaaatagttcataaatttccatcattttaaa 21731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 6836957 - 6837014
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  6836957 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatgcttcataaattt 6837014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 7302526 - 7302453
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||| |||| ||||    
T  7302526 cttaacttttaggtgtcattttaaattctctgcatttaacttgaacaaaatacttcataaatttccatcatttt 7302453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 30767476 - 30767412
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctcta--aatttgacttgaacaaaatacttcataaatt 210  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||    
T  30767476 cttagcttttaggtgtcatttgaaattctctataaatttaacttgaacaaaatacttcataaatt 30767412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 46706832 - 46706759
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  46706832 cttaacttttaggtatcatttgaaattctctaaatttaacttgaaaaaaatacttcataaatttccatcatttt 46706759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 47767612 - 47767539
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||| |||| ||||    
T  47767612 cttaacttttaggtgtcatttgaaattctctacatttaatttgaacaaaatacttcataaatttccatcatttt 47767539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 26323519 - 26323463
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26323519 atttgaaattctctaaatttgacttgaacaaaatacttcataaatttccatcatttt 26323463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 30766733 - 30766670
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||    
T  30766733 cttaacttttaggtgtcatttgaaattcactacatttaacttgaacaaaatacttcataaattt 30766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 47337061 - 47336998
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  47337061 cttaacttttagaagtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 47336998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 31021860 - 31021787
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||| | ||||||| ||||| |||||||||||||||||||| |||| ||||    
T  31021860 cttaacttttaggtgtcatttgaaattttttaaatttaacttggacaaaatacttcataaatttccatcatttt 31021787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 35279831 - 35279887
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  35279831 atttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 35279887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 32666060 - 32665989
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||| |||||||||||||| |||||| ||||  |||||||||||||||||||| || | |||||||    
T  32666060 cttttaggtgacatttcaaattctcaaaatttaactttgacaaaatacttcataaattttcagcattttaaa 32665989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 38506774 - 38506841
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| ||||||| ||| ||| ||||||||||||||||| |||||||| |||| ||||    
T  38506774 ttttaggtgtcatttgaaattctttaattttaacttgaacaaaatactttataaatttccatcatttt 38506841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 28182138 - 28182213
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||||||||  || ||||||||||||||| |||||||| || |||||||||||||| |||| |||||||    
T  28182138 cttaacttttaggtgtctattgaaattctctaaatttaacttgaac-aagtacttcataaatttccatcattttaaa 28182213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 20634379 - 20634312
Alignment:
Q  157 taggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||||| ||||||||||||||| ||||| |||||||| |||||| ||||  ||| |||||||    
T  20634379 taggtgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatcattttaaa 20634312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 40493243 - 40493186
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||| |||| |||||||||  || ||||||||||| |||||||||||    
T  40493243 ttttaggtgtcatttgaaatactctaaattgaacatgaacaaaatagttcataaattt 40493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 55460508 - 55460447
Alignment:
Q  160 gtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||| ||||||| |||| || |||||||||||||||||| ||||||| |||| ||||    
T  55460508 gtgtcatttgaaattctttaaaattaacttgaacaaaatacttcgtaaatttccatcatttt 55460447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 15760374 - 15760442
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||| ||||||| |||||||| ||| ||| ||||||| || |||||||||||||| |||||||| ||||    
T  15760374 cttaacttttagatgtcatttgaaaatctttaaatttaacctgaacaaaatacttaataaatttccatc 15760442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 45098285 - 45098241
Alignment:
Q  180 aatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||    
T  45098285 aatttaactagaacaaaatacttcataaattttcatcgttttaaa 45098241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 1146839 - 1146897
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 209  Q
    |||||||||| |||||||| ||||||||||||||| ||||  || |||||||||||||||    
T  1146839 tagcttttagatgtcatttgaaattctctaaatttaacttcgac-aaatacttcataaat 1146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 47284117 - 47284168
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||    
T  47284117 aaattctttaaatttaacttgaataaaatacttcataaatttccatcatttt 47284168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 48825024 - 48825095
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||| ||||| || ||||||| ||||||| |||||||||||||| || ||||||||  ||| |||||||    
T  48825024 cttttagatgtcagttgaaattctttaaatttaacttgaacaaaatattttataaatttttatcattttaaa 48825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 31189299 - 31189357
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||||| |||| ||||||| ||||||| |||| ||||||||||||||||| ||| ||||    
T  31189299 aggtgttatttgaaattctataaatttaacttaaacaaaatacttcataagtttccatc 31189357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 1583702 - 1583775
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  1583702 cttagcttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 1583775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 7309656 - 7309729
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  7309656 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 7309729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 11141485 - 11141412
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  11141485 cttagcttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 11141412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 39630404 - 39630331
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  39630404 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 39630331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 44255813 - 44255741
Alignment:
Q  149 ttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  44255813 ttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 44255741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 3092462 - 3092399
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  3092462 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 3092399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 769216 - 769143
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  769216 cttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 769143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 8736334 - 8736407
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  8736334 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 8736407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 32840085 - 32840158
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| ||||    
T  32840085 cttagcttttaggtgttatttcaaattctctaaatttgacttgaccaaaatacttcatgaatttccatcatttt 32840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 33189150 - 33189223
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  33189150 cttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 33189223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 45094364 - 45094437
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  45094364 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 45094437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 12263601 - 12263533
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  12263601 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 12263533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 28021999 - 28022070
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| |||| ||||    
T  28021999 tagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacctcataaattttcatcatttt 28022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 35047572 - 35047635
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  35047572 cttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaattt 35047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 740883 - 740821
Alignment:
Q  149 ttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  740883 ttagcttttaggtctcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 740821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 7167560 - 7167633
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  7167560 cttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcatttt 7167633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 28740776 - 28740703
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  28740776 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 28740703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 14306700 - 14306776
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||    
T  14306700 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaataattcataaattttcatcattttaaa 14306776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 20935886 - 20935823
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  20935886 cttaacttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaattt 20935823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 1730232 - 1730170
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  1730232 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaatt 1730170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 2274682 - 2274743
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 209  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  2274682 cttagcttttatgtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaat 2274743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 6749337 - 6749264
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  6749337 cttaactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 6749264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 7611781 - 7611854
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| |||| ||||    
T  7611781 cttaacttttaggtgtcatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcatttt 7611854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 30698461 - 30698388
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||| |||| ||||    
T  30698461 cttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcacaaatttccatcatttt 30698388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 32839541 - 32839598
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcat 205  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  32839541 cttaacttttaggtgtcacttcaaattctctaaatttgacttgaccaaaatacttcat 32839598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 11595466 - 11595406
Alignment:
Q  151 agcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  11595466 agcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaattt 11595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 41585583 - 41585659
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||| ||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||| |||||||    
T  41585583 cttaactttaaggtgtcatttgaaattctttaaatttaacttcaacaaaatacttcataaatttccatcattttaaa 41585659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 7227911 - 7227978
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||| |||| ||||    
T  7227911 ttttaggtgtcatttgaaattttctacatttaacttgaacaaaatacttcataaatttccatcatttt 7227978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 21504629 - 21504568
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  21504629 cttaacttttaggtgtcatttgaaat-ctctaaatttaacttgaacaaaatacttcataaatt 21504568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 11607365 - 11607308
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  11607365 ttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaattt 11607308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 13017958 - 13017886
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |||| ||||    
T  13017958 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaattttcatcatttt 13017886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 17905832 - 17905760
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |||| ||||    
T  17905832 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcatttt 17905760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 42941098 - 42941050
Alignment:
Q  163 tcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  42941098 tcatttgaaattctctaaatttaacttgaacaaaatacttcataaattt 42941050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 11606894 - 11606831
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||| |||||||||| ||||||||    
T  11606894 cttaacttttaggtgtcatttgaaattctataaatttaacttgagcaaaatacttaataaattt 11606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 31613994 - 31613919
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaa 223  Q
    |||| ||||||||||||||||  |||||| ||||||  |||||||||||||||||| ||||||| |||| ||||||    
T  31613994 cttaacttttaggtgtcatttttaattctgtaaattaaacttgaacaaaatacttcgtaaattttcatcattttaa 31613919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 11036512 - 11036446
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||| ||||||| ||||||  |||||||||||||||||||||||||| |||| |||||||    
T  11036512 aggtatcattttaaattctttaaattatacttgaacaaaatacttcataaatttccatcattttaaa 11036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 767345 - 767277
Alignment:
Q  156 ttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||| |||||||| |||||  ||||| |||||| ||||||||||||| |||| |||||||    
T  767345 ttaggtgtcatttgaaattctcaaaattgaacttggacaaaaaacttcataaatttccatcattttaaa 767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 2701877 - 2701943
Alignment:
Q  156 ttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaa 223  Q
    ||||||||||||| ||| ||||||||||| | |||||||||||| ||||||||||| |||| ||||||    
T  2701877 ttaggtgtcatttaaaactctctaaatttaatttgaacaaaata-ttcataaattttcatcattttaa 2701943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 11594989 - 11594926
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||| |||||||||| ||| ||||    
T  11594989 cttaacttttaggtgtcatttgaaattctataaatttaacttgagcaaaatacttaatatattt 11594926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 2924887 - 2924831
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||||||| |||| ||||    
T  2924887 atttgaaattctctaattttaacttgaacaaaatacttaataaattttcatcatttt 2924831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 29278910 - 29278971
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaat 209  Q
    |||||||||||| |  ||||| | |||||| |||||| ||||||| ||||||||||||||||    
T  29278910 cttagcttttagataccatttgatattctcgaaatttaacttgaataaaatacttcataaat 29278971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 44205555 - 44205624
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaa-caaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||| | ||||||| |||||||  |||| ||||||||||||| |||| ||||    
T  44205555 cttttaggtgtcatttgaaattttttaaatttaacttgaataaaaacacttcataaatttccatcatttt 44205624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 14404910 - 14404950
Alignment:
Q  152 gcttttaggtgtcatttcaaattctctaaatttgacttgaa 192  Q
    ||||||||||||||||| ||||||| ||||||| |||||||    
T  14404910 gcttttaggtgtcatttaaaattctttaaatttaacttgaa 14404950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 47108460 - 47108384
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  47108460 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaattttcatcgttttaaa 47108384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 2126037 - 2125964
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  2126037 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 2125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 16516352 - 16516279
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  16516352 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcatttt 16516279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 35470302 - 35470229
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  35470302 cttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 35470229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 26534673 - 26534610
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  26534673 cttagcttttaggtgtcatttcaaattttctaaatttgacttaaacaaaatacttcatgaattt 26534610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 42776136 - 42776199
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  42776136 cttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaattt 42776199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 29091317 - 29091244
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  29091317 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcatttt 29091244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 13088623 - 13088691
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  13088623 cttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaattttcatcatttt 13088691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 53760683 - 53760759
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||    
T  53760683 cttaactttttggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 53760759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 13318552 - 13318611
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataa 207  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13318552 cttagattttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataa 13318611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 10354522 - 10354460
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    ||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  10354522 cttaggttttaggtgtcatttgaaattctctatatttgtcttgaacaaaatacttcataaatt 10354460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 27284570 - 27284631
Alignment:
Q  163 tcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  27284570 tcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaa 27284631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 40338145 - 40338218
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  40338145 cttaacttttaggtgtcatttgaaattttctaaatttaacttgaataaaatacttcataaatttccatcatttt 40338218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 24705531 - 24705455
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||  ||| |||||||    
T  24705531 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaatttctatcattttaaa 24705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 41139653 - 41139577
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||||||||| ||||| |||||||||||||||  ||| ||||||||||||||||||||| |||| |||||||    
T  41139653 cttaacttttaggtgccatttgaaattctctaaatttagcttaaacaaaatacttcataaattttcatcattttaaa 41139577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 46242991 - 46243063
Alignment:
Q  149 ttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||| ||||    
T  46242991 ttagcttttagatgtcattttaaattctctaaatttaacttgaataaaatacttcttaaatttccatcatttt 46243063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 54566355 - 54566279
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||  ||| |||||||    
T  54566355 cttaactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttcgatcattttaaa 54566279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 46242447 - 46242510
Alignment:
Q  158 aggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  46242447 aggtgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcatttt 46242510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 52494102 - 52494028
Alignment:
Q  149 ttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||| |||| |||||||    
T  52494102 ttagtttttaggtgtcatttgaaattctctaaatttaacttgaagaaaatacttcat-aatttccatccttttaaa 52494028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 52294938 - 52295000
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||| |||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  52294938 cttaccttttaggtgtcatttgaaattctctacatttaacttgaacacaatacttcataaatt 52295000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 4490207 - 4490134
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||| |||| |||| ||||||||||||||| ||||||||||||||| |||||||||| |||| ||||    
T  4490207 cttaacttttatgtgtaatttgaaattctctaaatttaacttgaacaaaatacatcataaatttccatcatttt 4490134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 56339308 - 56339240
Alignment:
Q  153 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||||||||||||||| |||| ||||    
T  56339308 cttttaggtgttatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcatttt 56339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 17727245 - 17727182
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| ||||||| |||||||| ||||||||||||||| |||| ||||||||||||| |||||||    
T  17727245 cttaacttttagttgtcatttgaaattctctaaatttaactttaacaaaatacttcgtaaattt 17727182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 42776810 - 42776744
Alignment:
Q  155 tttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||| ||||| ||||||||| | |||||||||||||||||||||||| |||| ||||    
T  42776810 tttatgtgtcatttgaaattatctaaatttaatttgaacaaaatacttcataaatttccatcatttt 42776744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 29685969 - 29686042
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||  ||||||||||||||  || |||||||||||||| |||||||| |||| ||||    
T  29685969 cttaacttttaggtgtcattagaaattctctaaattcaacatgaacaaaatactttataaatttccatcatttt 29686042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 42775780 - 42775722
Alignment:
Q  156 ttaggtgtcatttcaaattctctaaatttgacttgaac---aaaatacttcataaattt 211  Q
    ||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||||    
T  42775780 ttaggtgtcatttgaaattctctaaatttaacttgaacaaaaaaatacttcataaattt 42775722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 18922467 - 18922529
Alignment:
Q  150 tagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattta 212  Q
    |||||||||| | |||||| ||||||||||||||| ||||| |||||||| ||| ||||||||    
T  18922467 tagcttttagatatcatttgaaattctctaaatttaacttggacaaaatatttcgtaaattta 18922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 24062951 - 24062878
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||| ||||| |||||||| ||||||||||||||| | ||| || |||||||||| |||||| |||| ||||    
T  24062951 cttagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatttccatcatttt 24062878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 30303895 - 30303838
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||| |||| ||||||||||||||| | ||| | ||||||||||||||||||    
T  30303895 ttttaggtgttatttgaaattctctaaatttaagttggataaaatacttcataaattt 30303838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 40548128 - 40548184
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| ||||||||||||||| |||||||||||||| ||| ||||||| |||| ||||    
T  40548128 atttgaaattctctaaatttaacttgaacaaaatatttcctaaatttccatcatttt 40548184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 17727091 - 17727032
Alignment:
Q  165 atttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||| ||||||||||||||  | |||||||||||| ||||||||||| |||| |||||||    
T  17727091 atttaaaattctctaaattcaatttgaacaaaatatttcataaattttcatcattttaaa 17727032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 16300133 - 16300179
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatc 216  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||    
T  16300133 aaattctctatatttaacttgtacaaaatacttcataaattttcatc 16300179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 30303260 - 30303210
Alignment:
Q  163 tcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttac 213  Q
    |||||| ||||| ||||||||| |||||| ||||||| |||||||||||||    
T  30303260 tcatttgaaattttctaaatttaacttgatcaaaatagttcataaatttac 30303210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 39904636 - 39904684
Alignment:
Q  163 tcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||||||||||| ||||||||| | ||| |||||| |||||||||||||    
T  39904636 tcatttcaaattttctaaatttaaattgcacaaaacacttcataaattt 39904684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 4391 - 4464
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  4391 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 4464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 5035 - 5108
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  5035 cttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 5108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 221089 - 221162
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  221089 cttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 221162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 223642 - 223715
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  223642 cttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcatttt 223715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 19678 - 19751
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| ||||    
T  19678 cttaacttttaggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaatttccatcatttt 19751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 11848 - 11925
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgac-ttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    ||||||||||||||| ||||| |||||||||||||||  | |||||||||||||||||||||||| |||| |||||||    
T  11848 cttagcttttaggtgccatttgaaattctctaaatttatctttgaacaaaatacttcataaattttcatcattttaaa 11925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 7327 - 7258
Alignment:
Q  152 gcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| |||| ||||    
T  7327 gcttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcgtaaatttccatcatttt 7258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 50200 - 50273
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||| |||||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||||| |||| ||||    
T  50200 cttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaagtacttcataaatttccatcatttt 50273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 4248 - 4182
Alignment:
Q  154 ttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    ||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||| |||| ||||    
T  4248 ttttaggtgtcatttgaaattctctaattttaactt-aacaaaatacttcataaatttccatcatttt 4182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 109210 - 109147
Alignment:
Q  148 cttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaattt 211  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||    
T  109210 cttaacttttaggtgtcatttgaaattatctaaatttaacttgaataaaatactttataaattt 109147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 15770 - 15821
Alignment:
Q  159 ggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||||||||| || |||||||||||| |||||||||| ||||||||||||||    
T  15770 ggtgtcatttgaagttctctaaatttaacttgaacaatatacttcataaatt 15821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 16289 - 16343
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgttttaaa 224  Q
    |||||||||| |||| ||||||||||||||||| |||||||| |||| |||||||    
T  16289 aaattctctacatttaacttgaacaaaatactttataaatttccatcattttaaa 16343  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 2812 - 2863
Alignment:
Q  159 ggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatt 210  Q
    |||||||||| || || ||||||||| |||||||||| ||||||||||||||    
T  2812 ggtgtcatttgaagttatctaaatttaacttgaacaatatacttcataaatt 2863  T

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Target: scaffold0065; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 9501 - 9552
Alignment:
Q  170 aaattctctaaatttgacttgaacaaaatacttcataaatttacatcgtttt 221  Q
    |||||||||| |||| ||||||||||||||||| |||||||| |||| ||||    
T  9501 aaattctctacatttaacttgaacaaaatactttataaatttccatcatttt 9552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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