View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18945_low_25 (Length: 264)
Name: NF18945_low_25
Description: NF18945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18945_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 7705483 - 7705719
Alignment:
| Q |
15 |
aacctgtgtatcagaaattaaattttaccgtgattcaaatcatgtagaatgttttgccaatgtcattcttcaatagcaatataaaccatgtagatccttt |
114 |
Q |
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| T |
7705483 |
aacctgtgtatcagaaattaaattttacagtgattcaaatcatgtagaatgttttgccaatgtcattcttcaatagcaatataagccatgtagatccttt |
7705582 |
T |
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| Q |
115 |
aagcaataaaattattaattgttaatgcttatcgctaattctaaccagtgcatcatattggattacgtaaggaa-----------agggatgaaatatga |
203 |
Q |
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| T |
7705583 |
aagcaataaaattattaattgttaatgcttatcgctaatgccaatcagtgcataata------tacgtaaggaagggatgaaatgaggaatgatatatga |
7705676 |
T |
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| Q |
204 |
aaaggaaattaagaaataaatagaggaaaatggaagtaattga |
246 |
Q |
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| T |
7705677 |
aaaggaaattaagaaataaatagaggaaaatggaagtaattga |
7705719 |
T |
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