View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18946_high_4 (Length: 449)
Name: NF18946_high_4
Description: NF18946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18946_high_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 22879464 - 22879886
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttccc-tacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
22879464 |
ttttccaacactcaaacacactatcaaccaaaattacacattcattttcccctacattagcaataggccctcttccacaagcaacctcaagaagaaatgc |
22879563 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22879564 |
accaaaagaaaacatatcagaaaatttagtcgccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttttgtgagga |
22879663 |
T |
|
| Q |
200 |
tctgcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaag |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22879664 |
tctgcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccatttttcatgaagataaaccacacctgaag |
22879763 |
T |
|
| Q |
300 |
caacacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcata |
399 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22879764 |
caacacctttgatgattctaaatctttcactccaattcaacttcacttttggttggttatatagatagttgtctaaacttccatttggcatgtaatcata |
22879863 |
T |
|
| Q |
400 |
aaccaaaagtaactccctttttc |
422 |
Q |
| |
|
||||||||||||||| ||||||| |
|
|
| T |
22879864 |
aaccaaaagtaactcgctttttc |
22879886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22814102 - 22814331
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814102 |
gcattaaattcagaatctaataacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
22814201 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814202 |
cacctttgatgattctatatctttgactccaattcaaccttacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
22814301 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
22814302 |
caaaagtaactcgctttttcgcctgcaata |
22814331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22888373 - 22888602
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888373 |
gcattaaatccagaatctaacaacacattactagcctttatgtctctatgaataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
22888472 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888473 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
22888572 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
22888573 |
caaaagtaactcgctttttcgcctgcaata |
22888602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22804411 - 22804640
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
22804411 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcgtgaagataaaccacagctgaagcaa |
22804510 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22804511 |
cacctttgatgattctaaatctttgactccaactcaacctcacttttggttggttgtatagatagttgtctaaacttccattcggcatgtaatcataaac |
22804610 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
22804611 |
caaaagtaactcgctttttcgcctgcaata |
22804640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22839127 - 22839356
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22839127 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccaaacctgaagcaa |
22839226 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22839227 |
cacctttgatgattctaaatctttgaatccaattcaacctcacttttggttcgttgtataaatagttgtctaaacttccattcggcatgtaatcataaac |
22839326 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
22839327 |
caaaagtaactcactttttcgcctgcaata |
22839356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22893028 - 22893257
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22893028 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaattacaactttctcccattcttcatgaagataaaccacgcctgaagcaa |
22893127 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22893128 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttgtataaatatttgtctaaacttccattcggcatgtaatcataaac |
22893227 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
22893228 |
caaaagtaactcgctttttcgcctgcaata |
22893257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22808695 - 22808924
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
22808695 |
gcattaaattcagaatctaacaacacattactagcctttatgtctcgatgaattacaactttctcccattcttcgtgtagataaaccacacctgacgcaa |
22808794 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22808795 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttgcttgtatagatagttgtctaaacttccatttggcatgtaatcataaac |
22808894 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |
|
|
| T |
22808895 |
caaaagtaactccctttttcgcctgcaata |
22808924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 209 - 432
Target Start/End: Original strand, 22830112 - 22830335
Alignment:
| Q |
209 |
aattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaacacctt |
308 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| || ||||||||||||||||| |||| ||||| |
|
|
| T |
22830112 |
aattcagaatctaacaacacattactagcctttatgtctctatgaatcacaactttctcccattcttcgtgtagataaaccacacctgacgcaatacctt |
22830211 |
T |
|
| Q |
309 |
tgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaaccaaaag |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830212 |
tgatgattctaaatctttgactccaattcaacctcacttttggttggttgaatagatagttgtctaaacttccattcggcatgtaatcataaaccaaaag |
22830311 |
T |
|
| Q |
409 |
taactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||| ||||||| ||||||||| |
|
|
| T |
22830312 |
taactcgctttttcgcctgcaata |
22830335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 203 - 432
Target Start/End: Original strand, 22875003 - 22875232
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
22875003 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaatcacaactttttcccattcttcatgtagataaaccaaacctgaagcaa |
22875102 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22875103 |
cacctttgatgattttaaatctttgaatccaattcaacctcacttttggttccttgtataaatagttgtctaaacttccatttggcatgtaatcataaac |
22875202 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |
|
|
| T |
22875203 |
caaaagtaactccctttttcgcctgcaata |
22875232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22813854 - 22814059
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttcccta-cattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22813854 |
ttttccaacactcaaatacacaatcaaccaaaattacactttcattttccccaacattagaaataggccttctaccacaagcaacctcaagaagaaatgc |
22813953 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22813954 |
accaaaagaaaacatatcagaaaatttagtggccttacctgttctaatatgttcaggagcaagataaccaattgttccagccaaatgagttgtgtgagga |
22814053 |
T |
|
| Q |
200 |
tctgca |
205 |
Q |
| |
|
|||||| |
|
|
| T |
22814054 |
tctgca |
22814059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22874755 - 22874956
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttccc-tacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22874755 |
ttttccaacactcaaatacacaatcaaccaaaattacacattcattttcccctacattggcaataggccttctaccacaagcaacctcaagaagaaatgc |
22874854 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22874855 |
accaaaagaaaacacatcagaaaatttagtagccttaccagttctaatatgttccggagcaagataaccaatagttccagccaaatgagttgtgtgagga |
22874954 |
T |
|
| Q |
200 |
tc |
201 |
Q |
| |
|
|| |
|
|
| T |
22874955 |
tc |
22874956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22892780 - 22892985
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttcccta-cattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22892780 |
ttttccaacactcaaatacacaatcaaccaaaattacactttcattttccccaacattagaaataggccttctaccacaagcaacctcaagaagaaatgc |
22892879 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
22892880 |
accaaaagaaaacacatcagaaaatttagtagccttacctgttctaatatgttccggagcaagataaccaatagttccagccaaatgagtcgtgtgatga |
22892979 |
T |
|
| Q |
200 |
tctgca |
205 |
Q |
| |
|
|||||| |
|
|
| T |
22892980 |
tctgca |
22892985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22897096 - 22897297
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttcc-ctacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22897096 |
ttttccaacactcaaagacacaatcaaccaaaattacgcattcattttccgctacattttcaataggccttctaccacaagcaacctcgagaagaaatgc |
22897195 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| | || ||||| || | ||||||| |||||||||||||||||||| |
|
|
| T |
22897196 |
accaaaagaaaacacatcagaaaatttagtagccttacctgttctagtatgttcaggtgctagataccctacagttccaaccaaatgagttgtgtgagga |
22897295 |
T |
|
| Q |
200 |
tc |
201 |
Q |
| |
|
|| |
|
|
| T |
22897296 |
tc |
22897297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 22829922 - 22830063
Alignment:
| Q |
64 |
aggccttctaccacaagcaacctcaagaagaaatgcaccaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaaga |
163 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||||| |||||||| |
|
|
| T |
22829922 |
aggcctcctaccacaaacaacctcaagaagaaatgcaccaaaagaaaacacatcagaaaattttgtagccttacctgttctaatatgttcaggagcaaga |
22830021 |
T |
|
| Q |
164 |
taaccaatagttccagccaaatgagttgtgtgaggatctgca |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830022 |
taaccaatagttccagccaaatgagttgtgtgaggatctgca |
22830063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 22888129 - 22888326
Alignment:
| Q |
5 |
ccaacactcaaacacaaaatcaaccaaaattacacattcattttc-cctacattaacaataggccttctaccacaagcaacctcaagaagaaatgcacca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||| | ||||| || ||||| || |||||| | | |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
22888129 |
ccaacattcaaacacagaatcaactagaattagactctcattgtctcctacacgacctataggcctcctaccacaaacaacctcaagaagaaatgcacca |
22888228 |
T |
|
| Q |
104 |
aaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
201 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888229 |
aaagaaaacacatcagaaaatttagtagccttacctcttctaatatgttcaggagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
22888326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22808447 - 22808652
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttc-cctacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||| ||||||||| ||||||| | ||||| || |||||||| || ||| | | |||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
22808447 |
ttttccaacattcaaacacataatcaactagaattagactctcattttctcccacacgacctataggcctccgaccacaaacaacctcaagaagaaatgc |
22808546 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22808547 |
accaaaagaaaacacatcagaaaatttagtagccttacctgttctaatatgctcaggggcaagataaccaatagttccaaccaaatgagttgtgtgagga |
22808646 |
T |
|
| Q |
200 |
tctgca |
205 |
Q |
| |
|
|||||| |
|
|
| T |
22808647 |
tctgca |
22808652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22838879 - 22839080
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttc-cctacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||| || |||| ||| |||||| | | |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
22838879 |
ttttccaacactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctcctaccacaaacaacctcaagaagaaatgc |
22838978 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
22838979 |
accaaaagaaaacacatcagaaaatttagtagccttacctgttctaatatgatcaggagcaagataaccaaaagttccaaccaaatgagtagtgtgagga |
22839078 |
T |
|
| Q |
200 |
tc |
201 |
Q |
| |
|
|| |
|
|
| T |
22839079 |
tc |
22839080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 204 - 432
Target Start/End: Original strand, 22897345 - 22897573
Alignment:
| Q |
204 |
cattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaac |
303 |
Q |
| |
|
|||| |||||| |||||| |||||||| ||||| |||||||||||||| || ||||| | |||||||||||| || ||||||| || ||| ||||||| |
|
|
| T |
22897345 |
cattcaattcaccatctaataacacattgctagcctttatgtctctatgaatcacaacctgctcccattcttcgtgtagataaaacaaacccaaagcaac |
22897444 |
T |
|
| Q |
304 |
acctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaacc |
403 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
22897445 |
acctttgatgattcgaaatctttgactccaattcaaggtcactcttggttggttgtatagataattgtctagacttccattaggcatgtaatcatagacc |
22897544 |
T |
|
| Q |
404 |
aaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
| ||| ||||| | ||||| ||||||||| |
|
|
| T |
22897545 |
agaagcaactcaccttttcgcctgcaata |
22897573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 22804225 - 22804364
Alignment:
| Q |
62 |
ataggccttctaccacaagcaacctcaagaagaaatgcaccaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaa |
161 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||| |||||| |
|
|
| T |
22804225 |
ataggcctcctaccacaaacaacctcaagaagaaatgcaccaaaagaaaacacatcagaaaatttagtagccttacctgttctaatatgatcaggagcaa |
22804324 |
T |
|
| Q |
162 |
gataaccaatagttccagccaaatgagttgtgtgaggatc |
201 |
Q |
| |
|
||||||||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
22804325 |
gataaccaaaagttccaaccaaatgagtagtgtgaggatc |
22804364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 429
Target Start/End: Original strand, 22912754 - 22912969
Alignment:
| Q |
217 |
atctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaacacctttgatgatt |
316 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||||||||| | ||||| || ||| |||||||||||||| |||||| |
|
|
| T |
22912754 |
atctaataaaacattactagctttaatgtctctatgaataacaacttgttcccattcttcatgtaaataaaacaaaccagaagcaacacctttaatgatt |
22912853 |
T |
|
| Q |
317 |
ctaaatctttgactccaattcaacctcacttttggttg---gttatatagatagttgtctaaacttccattcggcatgtaatcataaaccaaaagtaact |
413 |
Q |
| |
|
||||| |||||||||||||| || | | | || |||| | | | || ||| |||||||||||||||||| |||||||||| || || | |||||||| |
|
|
| T |
22912854 |
ctaaacctttgactccaatttaaggtaaatctttgttgtttggtgtgtaaatatttgtctaaacttccattctgcatgtaatcgtagacaagaagtaact |
22912953 |
T |
|
| Q |
414 |
ccctttttctcctgca |
429 |
Q |
| |
|
| | ||||| |||||| |
|
|
| T |
22912954 |
cgccttttcgcctgca |
22912969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 22825473 - 22825562
Alignment:
| Q |
343 |
cacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaaccaaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||| |
|
|
| T |
22825473 |
cacttttggtgggttatgtagataattgtctaaacttccattcggcatgtaatcataaatcaaaagtaactcgctttttcgcctgtaata |
22825562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 203 - 432
Target Start/End: Complemental strand, 21151639 - 21151410
Alignment:
| Q |
203 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
21151639 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaattacaactttctcccattcttcatgtagataaaccacacttgaagcaa |
21151540 |
T |
|
| Q |
303 |
cacctttgatgattctaaatctttgactccaattcaacctcacttttggttggttatatagatagttgtctaaacttccattcggcatgtaatcataaac |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21151539 |
cacctttgatgattctaaatctttgactccaattcaacctcgcttttggttggttgtatagatagttgtctaaacttccatttggcatgtaatcataaac |
21151440 |
T |
|
| Q |
403 |
caaaagtaactccctttttctcctgcaata |
432 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |
|
|
| T |
21151439 |
caaaagtaactcgctttttcgcctgcaata |
21151410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21151887 - 21151682
Alignment:
| Q |
1 |
ttttccaacactcaaacacaaaatcaaccaaaattacacattcattttc-cctacattaacaataggccttctaccacaagcaacctcaagaagaaatgc |
99 |
Q |
| |
|
|||||||||| ||||||||| ||||||| | ||||| || || || || || |||| | | |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
21151887 |
ttttccaacattcaaacacataatcaactagaattagactctcgttgtctccgacatgacctataggcctcctaccacaaacaacctcaagaagaaatgc |
21151788 |
T |
|
| Q |
100 |
accaaaagaaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgagga |
199 |
Q |
| |
|
|||||||||||| | ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151787 |
accaaaagaaaacacatcagaagatttagtagccttacctgttctaatatgttccggagcaagataaccaatagttccagccaaatgagttgtgtgagga |
21151688 |
T |
|
| Q |
200 |
tctgca |
205 |
Q |
| |
|
|||||| |
|
|
| T |
21151687 |
tctgca |
21151682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 15627142 - 15627187
Alignment:
| Q |
60 |
caataggccttctaccacaagcaacctcaagaagaaatgcaccaaa |
105 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||| ||||||||| |
|
|
| T |
15627142 |
caataggccttctcccacaagctacctcaagcagaagtgcaccaaa |
15627187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 4979142 - 4979106
Alignment:
| Q |
372 |
ctaaacttccattcggcatgtaatcataaaccaaaag |
408 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
4979142 |
ctaaacttccattaggcatgtactcataaaccaaaag |
4979106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 40404169 - 40404205
Alignment:
| Q |
372 |
ctaaacttccattcggcatgtaatcataaaccaaaag |
408 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
40404169 |
ctaaacttccattaggcatgtactcataaaccaaaag |
40404205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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