View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18947_high_23 (Length: 421)

Name: NF18947_high_23
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18947_high_23
NF18947_high_23
[»] chr2 (47 HSPs)
chr2 (1-406)||(2336457-2336862)
chr2 (108-403)||(2323462-2323746)
chr2 (102-208)||(30313209-30313314)
chr2 (101-186)||(39693911-39693990)
chr2 (179-247)||(13154479-13154547)
chr2 (140-208)||(33561510-33561578)
chr2 (141-247)||(31385729-31385835)
chr2 (140-208)||(30323495-30323563)
chr2 (102-208)||(29873558-29873664)
chr2 (137-232)||(33599616-33599711)
chr2 (111-234)||(13766789-13766914)
chr2 (142-208)||(29874084-29874150)
chr2 (19-80)||(2336847-2336908)
chr2 (163-208)||(33953853-33953898)
chr2 (169-247)||(25389983-25390061)
chr2 (143-208)||(3594240-3594305)
chr2 (137-233)||(18012501-18012595)
chr2 (140-197)||(28531373-28531430)
chr2 (140-197)||(37105966-37106023)
chr2 (163-208)||(41678449-41678494)
chr2 (140-208)||(962629-962697)
chr2 (140-208)||(28254296-28254364)
chr2 (140-208)||(42514680-42514748)
chr2 (175-238)||(20062462-20062525)
chr2 (140-195)||(36005939-36005994)
chr2 (114-228)||(2803199-2803313)
chr2 (140-197)||(14745726-14745783)
chr2 (140-197)||(15511554-15511611)
chr2 (140-197)||(15880305-15880362)
chr2 (140-205)||(30312823-30312888)
chr2 (140-197)||(36178664-36178721)
chr2 (140-197)||(38796679-38796736)
chr2 (144-197)||(41283538-41283591)
chr2 (105-170)||(2313878-2313945)
chr2 (108-184)||(24968021-24968096)
chr2 (106-233)||(25390293-25390420)
chr2 (105-152)||(45634826-45634873)
chr2 (124-205)||(37842551-37842633)
chr2 (140-197)||(5543057-5543114)
chr2 (140-197)||(6421427-6421484)
chr2 (107-208)||(7598259-7598360)
chr2 (103-248)||(18204406-18204550)
chr2 (163-208)||(28254194-28254239)
chr2 (140-197)||(36178230-36178287)
chr2 (140-197)||(37106230-37106287)
chr2 (151-195)||(31899496-31899540)
chr2 (140-196)||(40679688-40679744)
[»] chr8 (36 HSPs)
chr8 (103-247)||(40991745-40991889)
chr8 (103-181)||(11442911-11442990)
chr8 (140-208)||(4154340-4154407)
chr8 (140-208)||(4154725-4154793)
chr8 (144-208)||(9620739-9620803)
chr8 (66-178)||(30737602-30737715)
chr8 (140-197)||(45121969-45122026)
chr8 (163-247)||(5172870-5172954)
chr8 (107-205)||(7480224-7480322)
chr8 (163-209)||(34219215-34219261)
chr8 (107-168)||(11970313-11970373)
chr8 (142-234)||(4715281-4715373)
chr8 (143-198)||(5274816-5274871)
chr8 (140-197)||(3038349-3038406)
chr8 (140-197)||(3669729-3669786)
chr8 (111-184)||(5870399-5870472)
chr8 (130-227)||(6104582-6104679)
chr8 (140-185)||(33113426-33113471)
chr8 (140-197)||(34835251-34835308)
chr8 (140-197)||(45122666-45122723)
chr8 (135-195)||(25561870-25561930)
chr8 (140-208)||(40518613-40518681)
chr8 (142-197)||(20870634-20870689)
chr8 (163-197)||(8918846-8918880)
chr8 (143-197)||(9482666-9482720)
chr8 (126-184)||(35224721-35224779)
chr8 (140-197)||(9483246-9483303)
chr8 (140-197)||(18372053-18372110)
chr8 (140-197)||(34835517-34835574)
chr8 (140-197)||(34835783-34835840)
chr8 (180-209)||(40417618-40417647)
chr8 (103-208)||(40417738-40417843)
chr8 (140-197)||(40518113-40518170)
chr8 (163-208)||(41972189-41972234)
chr8 (163-207)||(33832010-33832054)
chr8 (150-234)||(34218806-34218890)
[»] chr4 (53 HSPs)
chr4 (103-231)||(29802549-29802677)
chr4 (105-248)||(41603213-41603356)
chr4 (103-183)||(2041137-2041217)
chr4 (143-247)||(7147702-7147805)
chr4 (103-195)||(31957544-31957636)
chr4 (84-233)||(23630310-23630459)
chr4 (103-234)||(37660829-37660960)
chr4 (103-208)||(15841388-15841493)
chr4 (103-208)||(760220-760324)
chr4 (103-172)||(30788285-30788354)
chr4 (135-208)||(34544137-34544210)
chr4 (85-195)||(53667333-53667443)
chr4 (163-208)||(28034260-28034305)
chr4 (103-159)||(31894663-31894719)
chr4 (103-206)||(10452335-10452438)
chr4 (151-202)||(11348396-11348447)
chr4 (113-184)||(9965910-9965980)
chr4 (108-205)||(23210821-23210916)
chr4 (138-195)||(36572063-36572120)
chr4 (157-214)||(43119434-43119491)
chr4 (140-197)||(49880202-49880259)
chr4 (140-197)||(50002468-50002525)
chr4 (140-197)||(50630812-50630869)
chr4 (113-205)||(18975836-18975927)
chr4 (103-234)||(30249707-30249839)
chr4 (140-208)||(36629268-36629336)
chr4 (126-197)||(52884929-52885001)
chr4 (111-194)||(18637151-18637234)
chr4 (103-138)||(19958056-19958091)
chr4 (126-197)||(22028004-22028075)
chr4 (163-198)||(44620701-44620736)
chr4 (178-225)||(53203749-53203796)
chr4 (150-208)||(23556933-23556991)
chr4 (140-197)||(2741113-2741170)
chr4 (140-197)||(3340849-3340906)
chr4 (140-197)||(3341170-3341227)
chr4 (140-197)||(4955374-4955431)
chr4 (186-247)||(10370108-10370169)
chr4 (171-208)||(15841072-15841109)
chr4 (163-208)||(31249938-31249983)
chr4 (140-185)||(31691206-31691251)
chr4 (140-197)||(39404060-39404117)
chr4 (140-197)||(45496847-45496904)
chr4 (116-245)||(45834451-45834580)
chr4 (120-233)||(53204129-53204242)
chr4 (140-197)||(54108955-54109011)
chr4 (140-197)||(54936238-54936295)
chr4 (140-208)||(3244508-3244576)
chr4 (111-159)||(17675225-17675273)
chr4 (105-209)||(21376698-21376802)
chr4 (103-159)||(53211557-53211613)
chr4 (142-197)||(54108578-54108634)
chr4 (140-196)||(55933181-55933237)
[»] chr3 (38 HSPs)
chr3 (105-238)||(41857425-41857558)
chr3 (103-177)||(50329354-50329428)
chr3 (137-234)||(2417322-2417419)
chr3 (107-231)||(32930695-32930820)
chr3 (104-208)||(47964541-47964645)
chr3 (105-233)||(33153563-33153690)
chr3 (103-183)||(45717831-45717911)
chr3 (142-200)||(39336290-39336348)
chr3 (103-173)||(50329645-50329715)
chr3 (105-206)||(25317191-25317292)
chr3 (171-231)||(30399664-30399724)
chr3 (107-169)||(1454938-1455001)
chr3 (103-205)||(21867968-21868071)
chr3 (163-201)||(12749207-12749245)
chr3 (102-199)||(39335991-39336088)
chr3 (140-197)||(32589745-32589802)
chr3 (140-197)||(43346850-43346907)
chr3 (140-208)||(12114621-12114689)
chr3 (140-208)||(21832402-21832470)
chr3 (140-208)||(47964974-47965042)
chr3 (140-191)||(4823703-4823754)
chr3 (126-197)||(35946564-35946635)
chr3 (143-206)||(46546387-46546450)
chr3 (107-197)||(41359791-41359881)
chr3 (140-197)||(3384325-3384382)
chr3 (142-195)||(15772898-15772951)
chr3 (140-197)||(22304611-22304668)
chr3 (149-198)||(26605729-26605778)
chr3 (140-197)||(33362352-33362409)
chr3 (140-197)||(37991036-37991093)
chr3 (140-197)||(42342447-42342504)
chr3 (140-185)||(52634994-52635039)
chr3 (103-135)||(6087777-6087809)
chr3 (145-193)||(9240195-9240243)
chr3 (108-184)||(39183131-39183206)
chr3 (154-234)||(39903662-39903742)
chr3 (142-198)||(39914293-39914349)
chr3 (108-184)||(40056592-40056667)
[»] chr6 (34 HSPs)
chr6 (83-247)||(34661611-34661775)
chr6 (103-214)||(5034843-5034954)
chr6 (102-208)||(12092503-12092609)
chr6 (142-208)||(6071163-6071229)
chr6 (107-205)||(20848353-20848452)
chr6 (140-205)||(8481960-8482025)
chr6 (111-204)||(28033236-28033328)
chr6 (107-208)||(10074389-10074490)
chr6 (140-197)||(3409301-3409358)
chr6 (107-207)||(10073642-10073742)
chr6 (103-191)||(5035343-5035431)
chr6 (175-238)||(11328889-11328952)
chr6 (105-148)||(34900626-34900669)
chr6 (126-208)||(10074036-10074118)
chr6 (103-172)||(405043-405112)
chr6 (140-197)||(2377796-2377853)
chr6 (140-197)||(2578502-2578559)
chr6 (119-160)||(3624849-3624890)
chr6 (142-195)||(16454619-16454672)
chr6 (140-197)||(35210246-35210303)
chr6 (101-157)||(3075926-3075982)
chr6 (142-197)||(1846790-1846845)
chr6 (126-197)||(2579917-2579988)
chr6 (169-208)||(33605685-33605724)
chr6 (140-197)||(14748397-14748454)
chr6 (107-168)||(29028161-29028222)
chr6 (140-197)||(29518545-29518602)
chr6 (140-197)||(29518962-29519019)
chr6 (143-208)||(31714701-31714765)
chr6 (140-197)||(32460639-32460696)
chr6 (140-197)||(32741221-32741278)
chr6 (150-206)||(1475262-1475318)
chr6 (103-159)||(18089922-18089978)
chr6 (180-208)||(33606006-33606034)
[»] chr7 (31 HSPs)
chr7 (107-160)||(23714886-23714939)
chr7 (164-209)||(42282101-42282146)
chr7 (128-232)||(28855780-28855884)
chr7 (107-197)||(7517622-7517712)
chr7 (126-197)||(37533056-37533126)
chr7 (140-197)||(1085675-1085732)
chr7 (140-197)||(37533423-37533480)
chr7 (105-197)||(3114464-3114556)
chr7 (127-195)||(36939779-36939847)
chr7 (142-197)||(11845233-11845288)
chr7 (107-197)||(19122773-19122863)
chr7 (140-197)||(22566721-22566778)
chr7 (144-197)||(22567102-22567155)
chr7 (140-197)||(29157607-29157664)
chr7 (140-197)||(30245119-30245176)
chr7 (137-194)||(33773281-33773338)
chr7 (163-208)||(37345949-37345994)
chr7 (140-197)||(45434678-45434735)
chr7 (168-208)||(10341863-10341903)
chr7 (163-247)||(42730308-42730392)
chr7 (142-209)||(4124149-4124216)
chr7 (140-195)||(6054604-6054659)
chr7 (107-197)||(30244312-30244402)
chr7 (126-205)||(45679478-45679557)
chr7 (106-184)||(22768538-22768616)
chr7 (105-159)||(32567963-32568017)
chr7 (100-221)||(40639585-40639707)
chr7 (140-197)||(23436-23493)
chr7 (107-168)||(7192786-7192847)
chr7 (123-200)||(45335508-45335585)
chr7 (176-204)||(15902335-15902363)
[»] chr5 (28 HSPs)
chr5 (96-214)||(32445910-32446028)
chr5 (131-233)||(31866026-31866128)
chr5 (152-208)||(31509654-31509710)
chr5 (152-208)||(31509762-31509818)
chr5 (140-208)||(41632813-41632881)
chr5 (137-232)||(2828061-2828156)
chr5 (103-197)||(26074654-26074748)
chr5 (143-206)||(26590972-26591035)
chr5 (140-197)||(9498713-9498770)
chr5 (105-234)||(9510544-9510673)
chr5 (140-208)||(19275560-19275627)
chr5 (135-197)||(26075216-26075278)
chr5 (150-247)||(10351242-10351339)
chr5 (140-197)||(18603179-18603236)
chr5 (140-208)||(36521955-36522023)
chr5 (166-209)||(6557471-6557514)
chr5 (140-195)||(25327979-25328034)
chr5 (142-197)||(33747813-33747868)
chr5 (163-234)||(36522319-36522390)
chr5 (105-184)||(38015864-38015943)
chr5 (107-197)||(35150049-35150138)
chr5 (163-208)||(1028599-1028644)
chr5 (144-197)||(6224238-6224291)
chr5 (114-159)||(9048710-9048755)
chr5 (140-197)||(15370141-15370198)
chr5 (140-197)||(40296374-40296431)
chr5 (140-197)||(41170676-41170733)
chr5 (103-195)||(4958262-4958353)
[»] chr1 (39 HSPs)
chr1 (101-208)||(1188608-1188715)
chr1 (107-197)||(26661548-26661638)
chr1 (85-232)||(2229264-2229416)
chr1 (101-184)||(47057726-47057809)
chr1 (143-205)||(1187426-1187488)
chr1 (140-197)||(17294619-17294676)
chr1 (142-207)||(24448309-24448374)
chr1 (82-178)||(30208187-30208284)
chr1 (96-205)||(30576598-30576707)
chr1 (140-208)||(5320024-5320092)
chr1 (140-208)||(10351191-10351259)
chr1 (128-232)||(17996014-17996118)
chr1 (114-184)||(8240396-8240467)
chr1 (127-197)||(44290870-44290941)
chr1 (103-231)||(50081077-50081207)
chr1 (107-205)||(8240630-8240728)
chr1 (142-208)||(19283516-19283582)
chr1 (114-184)||(43400621-43400691)
chr1 (114-159)||(7373363-7373408)
chr1 (144-209)||(12772902-12772967)
chr1 (163-208)||(22793309-22793354)
chr1 (140-197)||(32594775-32594832)
chr1 (140-197)||(41157033-41157090)
chr1 (140-197)||(48588547-48588604)
chr1 (140-208)||(22077554-22077622)
chr1 (149-197)||(41184493-41184541)
chr1 (162-197)||(44091936-44091971)
chr1 (157-247)||(3458679-3458767)
chr1 (142-208)||(22077171-22077237)
chr1 (96-214)||(30207834-30207948)
chr1 (105-150)||(3808930-3808975)
chr1 (140-197)||(14318909-14318966)
chr1 (140-197)||(26661957-26662014)
chr1 (140-197)||(31767220-31767277)
chr1 (140-197)||(34364967-34365024)
chr1 (140-197)||(40082449-40082505)
chr1 (140-197)||(44290517-44290574)
chr1 (108-184)||(7844554-7844629)
chr1 (140-192)||(45839678-45839730)
[»] scaffold0078 (1 HSPs)
scaffold0078 (142-197)||(5399-5454)
[»] scaffold0702 (1 HSPs)
scaffold0702 (140-197)||(573-630)
[»] scaffold0807 (1 HSPs)
scaffold0807 (149-209)||(3108-3168)
[»] scaffold0734 (1 HSPs)
scaffold0734 (146-197)||(5819-5870)
[»] scaffold0450 (2 HSPs)
scaffold0450 (123-177)||(13003-13055)
scaffold0450 (123-182)||(13709-13766)
[»] scaffold0045 (1 HSPs)
scaffold0045 (103-156)||(41496-41550)
[»] scaffold0113 (1 HSPs)
scaffold0113 (171-208)||(39487-39524)
[»] scaffold0002 (1 HSPs)
scaffold0002 (107-184)||(15436-15513)
[»] scaffold0391 (1 HSPs)
scaffold0391 (144-192)||(1754-1802)


Alignment Details
Target: chr2 (Bit Score: 386; Significance: 0; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 2336862 - 2336457
Alignment:
Q  1 gtcacgaggggagtctagccattataacaggacggaagataagtaaagtctagccaagtggtggatcacgaggggagtctggtgatcatcgacactgggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2336862 gtcacgaggggagtctagccattataacaggacggaagataagtaaagtctagccaagtggtggatcacgaggggagtctggtgatcatcgacattgggt 2336763  T
Q  101 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336762 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 2336663  T
Q  201 cttttctaagcaatttgaaacttctaactcacacatgcaacacaacaccaccaagcattgctccaccttggatttgaactcaaatgttcccgaatgtgaa 300  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  2336662 cttttctaagcaatttgaaacttctaactcacacatgctacacaacaccaccaaggattgctccacccaggatttgaactcaaatgttcccgaatgtgaa 2336563  T
Q  301 ccacttgagccgagccatttagttggacgaaaaataggtctgtaaccaaatatgaaccccaggttgtttatcccttattgcaataatttaaggatatctt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336562 ccacttgagccgagccatttagttggacgaaaaataggtctgtaaccaaatatgaaccccaggttgtttatcccttattgcaataatttaaggatatctt 2336463  T
Q  401 gcatga 406  Q
    ||||||    
T  2336462 gcatga 2336457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 108 - 403
Target Start/End: Complemental strand, 2323746 - 2323462
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttct 207  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||| ||||||||| ||||||    
T  2323746 aaccatacaagtgagttggacaccacatcttaacctaaaaccttaaggcattgg-tttatggatcctctcacttataaagtgtccaacctccatttttct 2323648  T
Q  208 aagcaatttgaaacttctaactcacacatgcaacacaacaccaccaagcattgctccaccttggatttgaactcaaatgttcccgaatgtgaaccacttg 307  Q
    || |||   || |||||||| |||||| | | |||||||||||   || |||||| || |   ||||||||||||||| ||||| | |||| ||||| ||    
T  2323647 aaacaaagcgagacttctaattcacaccttctacacaacacca---aggattgcttcagccaagatttgaactcaaatattcccaagtgtggaccacatg 2323551  T
Q  308 agccgagccatttagttggacgaaaaataggtctgtaaccaaatatgaaccccaggttgttta-tcccttattgcaataatttaaggatatcttgca 403  Q
    |||  ||||       |||||||||| ||||| |||||||||  |||| ||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  2323550 agcaaagcc-------tggacgaaaactaggt-tgtaaccaaggatgatccccatgttgtttattcccttgttgcaataattttaggatatcttgca 2323462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 30313314 - 30313209
Alignment:
Q  102 cagagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||||||||||||||||||   ||| ||||| ||||| ||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||    
T  30313314 cagagcaaccacacaagtgagagagacgccacactctta-cccaaaatcttaaggcaatgagtttttgggtcctctcacttat-aagtgttcaacctcca 30313217  T
Q  201 cttttcta 208  Q
    ||||||||    
T  30313216 cttttcta 30313209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 39693990 - 39693911
Alignment:
Q  101 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaa 186  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    ||||||||||||||    
T  39693990 tcagagcaaccaca--agtgagttggacaccacatcttaacccaaaatcttaaggcattgagtttatg----ctctcacttataaa 39693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 13154479 - 13154547
Alignment:
Q  179 cttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| || ||| ||||||||    
T  13154479 cttataaagtgttcaacctccacttttctaagcaatgtgagacttctaactcatacttgctacacaaca 13154547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 33561510 - 33561578
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| |||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33561510 acccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttcta 33561578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 31385835 - 31385729
Alignment:
Q  141 cccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaa 240  Q
    ||||||| ||||||||| ||  |||||||||||| |||||||||| ||| |||||||||| |||||||| | || | | ||||||||||||||| ||| |    
T  31385835 cccaaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacctccatttttctaaccgatgtcagacttctaactcacacttgcta 31385736  T
Q  241 cacaaca 247  Q
    |||||||    
T  31385735 cacaaca 31385729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 30323563 - 30323495
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||| ||| ||||| ||||||||||||| |||||||||||||||||| |||||||    
T  30323563 acccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttcta 30323495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 29873558 - 29873664
Alignment:
Q  102 cagagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||||||||||||||||||   |||  |||| ||||| | ||||| ||||||||| ||| |||||| |||||| |||||||||| |||||||||||||    
T  29873558 cagagcaaccacacaagtgagagagacgtcacactctta-ctcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctcca 29873656  T
Q  201 cttttcta 208  Q
    ||||||||    
T  29873657 cttttcta 29873664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 33599616 - 33599711
Alignment:
Q  137 ttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcac 232  Q
    |||||||| || |||||| ||| ||||||||||||||||||| ||||| | |  ||||||| ||||||||||| |||| |||||||||| ||||||    
T  33599616 ttaacccataaccttaagacatcgaatttatgggtcctctcatttatatatttctcaaccttcacttttctaaacaatgtgaaacttcttactcac 33599711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 13766914 - 13766789
Alignment:
Q  111 cacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcactt--ataaagtgttcaacctccacttttcta 208  Q
    |||||||  ||||| |||||||||| ||||| ||||| |||||| |||||| |||||  ||| ||||||||  ||||| |  ||||||||||||||||||    
T  13766914 cacacaaaagagttagacaccacattttaacacaaaaccttaagtcattgagtttattagtcatctcacttttataaaataatcaacctccacttttcta 13766815  T
Q  209 agcaatttgaaacttctaactcacac 234  Q
    | |||| | | |||||||||||||||    
T  13766814 aacaatgttagacttctaactcacac 13766789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 29874084 - 29874150
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| ||||||||| ||  ||||||||||||| || |||||||||||||||||||||||||||||    
T  29874084 ccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttcta 29874150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 2336908 - 2336847
Alignment:
Q  19 ccattataacaggacggaagataagtaaagtctagccaagtggtggatcacgaggggagtct 80  Q
    ||||||||||  ||| | |||||||||||||||||||||||||||| |||||||||||||||    
T  2336908 ccattataacccgacagcagataagtaaagtctagccaagtggtgggtcacgaggggagtct 2336847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 33953853 - 33953898
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  33953853 tttatgggtcctctcacttatatagtgttcaacctccacttttcta 33953898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 25389983 - 25390061
Alignment:
Q  169 ggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    |||| |||||||||| ||||||| |||||||| ||||||||||||| ||| | |||||||||| || ||| ||||||||    
T  25389983 ggtcttctcacttattaagtgttaaacctccatttttctaagcaatgtgagatttctaactcaaacttgctacacaaca 25390061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 3594240 - 3594305
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||||| ||| ||  ||||||| |||| ||||||||||||||||| |||||||||||||||    
T  3594240 caaaatcttaaagcaatgtgtttatggatcctatcacttataaagtgttcgacctccacttttcta 3594305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 18012595 - 18012501
Alignment:
Q  137 ttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcaca 233  Q
    ||||||||||||||||||| | |||| ||||||| ||||||| ||||  |||||||||  |||| |||| ||| |||| |||||||| |||||||||    
T  18012595 ttaacccaaaatcttaaggtaatgaaattatgggccctctcatttat--agtgttcaatgtccaattttttaaacaatgtgaaacttataactcaca 18012501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 28531373 - 28531430
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| ||| |||||||| ||||| |||||||| |||||||||||    
T  28531373 acccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacct 28531430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 37106023 - 37105966
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||| |||||||||||    
T  37106023 acccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacct 37105966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 41678449 - 41678494
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  41678449 tttatgggtcctctcacttataaagtgtttaacctccccttttcta 41678494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 962697 - 962629
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| |||||| || ||  ||||||||||||||||||||||| |||||||||||  |||||||||    
T  962697 acccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttcta 962629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 28254296 - 28254364
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||  ||||||||||  |||||||||    
T  28254296 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttcta 28254364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 42514748 - 42514680
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||||  ||  |||||||||||||| |||||||| |||||||||||  |||||||||    
T  42514748 acccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttcta 42514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 20062462 - 20062525
Alignment:
Q  175 ctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgc 238  Q
    ||||||||||||||||||||  |||| ||| ||||||||| ||| |||| ||||||||||||||    
T  20062462 ctcacttataaagtgttcaaattccattttactaagcaatgtgatacttgtaactcacacatgc 20062525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 36005939 - 36005994
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||    
T  36005939 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 36005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 2803199 - 2803313
Alignment:
Q  114 acaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaa 213  Q
    |||||||||||||||| ||||  || ||||||||  ||||| |||| | |||||||||| ||||  ||||| | |||||||||||||||| | ||| |||    
T  2803199 acaagtgagttggacatcacacttttacccaaaacgttaagacattaagtttatgggtcatctcttttatagaatgttcaacctccacttctttaaacaa 2803298  T
Q  214 tttgaaacttctaac 228  Q
    | ||| |||| ||||    
T  2803299 tgtgagacttttaac 2803313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 14745726 - 14745783
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  14745726 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 14745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 15511554 - 15511611
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||||| || ||  |||||||||||||| |||||||| |||||||||||    
T  15511554 acccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacct 15511611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 15880362 - 15880305
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  15880362 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 15880305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 30312888 - 30312823
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    |||||||| ||||||| | | | |||||||||| ||| | ||||||||||||||||||||||||||    
T  30312888 acccaaaaccttaaggaaataagtttatgggtcatctaagttataaagtgttcaacctccactttt 30312823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 36178664 - 36178721
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  36178664 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 36178721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 38796679 - 38796736
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||||||||   |||||||||||||| |||||||| |||||||||||    
T  38796679 acccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacct 38796736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 41283538 - 41283591
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  41283538 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 41283591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 2313945 - 2313878
Alignment:
Q  105 agcaaccacacaagtgagttg--gacaccacatcttaacccaaaatcttaaggcattgaatttatggg 170  Q
    |||||||| ||||||||||||  |||||||||||||| |  ||||||||||||| ||| |||||||||    
T  2313945 agcaaccatacaagtgagttgtggacaccacatcttagcataaaatcttaaggcgttggatttatggg 2313878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 24968096 - 24968021
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||| ||||||||||||| |||| ||| |||||| |||| ||| |||||||  | |||||||||    
T  24968096 aaccacacaagtgagtttgacaccacatcttcaccctaaaccttaagtcatt-aatatatgggttatatcacttata 24968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 25390293 - 25390420
Alignment:
Q  106 gcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    |||| |||||| |||||||||||||||||  |  |||||||| |||||| || |   |||||||||| ||| | |||||||| |  ||||||| ||||||    
T  25390293 gcaatcacacatgtgagttggacaccacacttctacccaaaaccttaagacaataggtttatgggtcttcttagttataaagggcccaacctctactttt 25390392  T
Q  206 ctaagcaatttgaaacttctaactcaca 233  Q
    || | ||  |||| ||||||||||||||    
T  25390393 ctgaacatcttgagacttctaactcaca 25390420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 45634873 - 45634826
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatctta 152  Q
    |||||| ||||||||| ||| |||||||||||||||||||||| ||||    
T  45634873 agcaacaacacaagtgtgttagacaccacatcttaacccaaaacctta 45634826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 37842633 - 37842551
Alignment:
Q  124 tggacaccacatcttaacccaaaatc-ttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||| ||||| | |||||||| | ||||| |||||| |||||| ||||||||||||||  | ||||||||||| ||||||    
T  37842633 tggacacaacatcattacccaaaaccattaagacattgagtttatgtgtcctctcacttatgcattgttcaacctctactttt 37842551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 5543057 - 5543114
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| |   ||||||| |||||| |||||||| |||||||||||    
T  5543057 acccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacct 5543114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 6421484 - 6421427
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| || |||||| ||| |||||| ||||||| |||||||| |||||||||||    
T  6421484 acccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacct 6421427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 7598360 - 7598259
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttc 206  Q
    ||||| ||||||||||   ||||||| ||  | |||||||| ||||||||  ||| |||||||||||||| | |||||| ||||| |||||  |||||||    
T  7598360 caaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttc 7598261  T
Q  207 ta 208  Q
    ||    
T  7598260 ta 7598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 18204406 - 18204550
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||||||| |||||| ||||   |||||||||| || ||| ||||  ||||  || ||| |||||||||||| ||| |||| || || |||| |||| ||    
T  18204406 agagcaacaacacaaatgagagagacaccacatttttacctaaaacattaaaacaatgagtttatgggtcctttcatttattaaatgctcaatctccgct 18204505  T
Q  203 tttctaagcaatttgaaacttctaactcacacatgcaacacaacac 248  Q
    ||||||| | | |||  ||||||||||||||| ||| |||||||||    
T  18204506 tttctaaccgacttgggacttctaactcacacttgc-acacaacac 18204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 28254194 - 28254239
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| ||||||| ||||||||||||||||||||  |||||||||    
T  28254194 tttatgagtcctcttacttataaagtgttcaacctttacttttcta 28254239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 36178230 - 36178287
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| ||  ||||||||| | || |||||||| |||||||||||    
T  36178230 acccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacct 36178287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 37106287 - 37106230
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||| | ||  |||||||||||||| |||||||| |||||||||||    
T  37106287 acccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacct 37106230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 31899496 - 31899540
Alignment:
Q  151 taaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    ||||||| ||| |||||||||||||| |||||||| |||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaac 31899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 40679688 - 40679744
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacc 196  Q
    |||||||||||||||||  ||  ||||||||| |||| |||||||| ||||||||||    
T  40679688 acccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacc 40679744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 40991889 - 40991745
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  40991889 agagcaaccacacaggtgagttggacaccacatcttaacccaaaaccttgaggcattgggtttatgggtcctctcacttatgaagtgttcaacctccact 40991790  T
Q  203 tttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    |||||||||||| ||  ||||||||||||||| | | ||||||||    
T  40991789 tttctaagcaatgtgggacttctaactcacacttcctacacaaca 40991745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 11442990 - 11442911
Alignment:
Q  103 agagcaaccacacaagtgag-ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcactt 181  Q
    |||||||||||||||||||| ||||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||    
T  11442990 agagcaaccacacaagtgagattggacaccacatattcacccaaaaccttaaggcattgagtttatgggtcctctcactt 11442911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 4154340 - 4154407
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  4154340 acccaaaatattaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccacttttcta 4154407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 4154725 - 4154793
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| |||  |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  4154725 acccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttcta 4154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 9620739 - 9620803
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  9620739 aaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttcta 9620803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 30737602 - 30737715
Alignment:
Q  66 tcacgaggggag-tctggtgatcatcgacactgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatt 164  Q
    ||||| |||||| ||||| ||||||| ||| |||| | |||||||||| |||| ||||||||||||| ||  ||||||||||| |||| | |||||  ||    
T  30737602 tcacgtggggagctctggggatcatctacattgggattagagcaaccatacaattgagttggacaccgcactttaacccaaaaccttatgacattgggtt 30737701  T
Q  165 tatgggtcctctca 178  Q
    ||||||||||||||    
T  30737702 tatgggtcctctca 30737715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 45121969 - 45122026
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  45121969 acccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacct 45122026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 5172954 - 5172870
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    |||||||||| || || |||| ||||||||||||| |||||||||||||||| |   ||||||||||||||| ||| ||||||||    
T  5172954 tttatgggtcttcccatttatgaagtgttcaaccttcacttttctaagcaatatatgacttctaactcacacttgctacacaaca 5172870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 7480224 - 7480322
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    |||| ||| ||||||||||||||||||||||  ||| |||| |||||||||||  |||| | |||  ||| | |||||||||||| |||||||||||||    
T  7480224 caacaacataagtgagttggacaccacatctgtacctaaaaccttaaggcattagatttgtaggttttcttatttataaagtgttaaacctccactttt 7480322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 34219215 - 34219261
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  34219215 tttatggatcctctctcttataaagtgttcaacctccacttttctaa 34219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 11970373 - 11970313
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatg 168  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  11970373 caaccacgcaagt-agttgggcaccacatcttaacccaaaatctaaaggcattgagtttatg 11970313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 4715373 - 4715281
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacac 234  Q
    |||||||||||||  | ||| ||||| | || ||||| |||||||||||||||||||||||||||| | ||||   | |||||||||||||||    
T  4715373 ccaaaatcttaagataatgagtttatagatcgtctcatttataaagtgttcaacctccacttttcttaacaatgcaagacttctaactcacac 4715281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 5274871 - 5274816
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctc 198  Q
    ||||||||||||||| ||| |||||||||| || || |||||||||||||||||||    
T  5274871 caaaatcttaaggcaatgattttatgggtcttcccatttataaagtgttcaacctc 5274816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 3038349 - 3038406
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||| | ||||||||||||||||||||    
T  3038349 acccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacct 3038406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3669786 - 3669729
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||| |||||| ||||||| |||||||| |||||||||||    
T  3669786 acccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacct 3669729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 5870472 - 5870399
Alignment:
Q  111 cacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||| | ||||||| |||||||| |||| |||||| |||||  ||||| ||||||||| ||||||||||||    
T  5870472 cacacaaataagttggataccacatcataactcaaaattttaagatattgagtttatgggttctctcacttata 5870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 6104582 - 6104679
Alignment:
Q  130 ccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaa 227  Q
    ||||||||| ||  |||| ||||||| ||||| |||||||||  ||||||||||||| |  ||| ||| |||||||| || ||||||||||| |||||    
T  6104582 ccacatctttacttaaaaccttaaggtattgagtttatgggtattctcacttataaattaatcatccttcacttttccaaacaatttgaaacatctaa 6104679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 33113426 - 33113471
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataa 185  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||    
T  33113426 acccaaaatcttaaggcaatgagtttatgggtcctcttacttataa 33113471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 34835308 - 34835251
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||  |||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  34835308 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 34835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 45122723 - 45122666
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  45122723 acccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacct 45122666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 25561870 - 25561930
Alignment:
Q  135 tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    ||||| ||||||| |||||| || ||| |||||||||||||| |||||||| |||||||||    
T  25561870 tcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaac 25561930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 40518681 - 40518613
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| |||||| |||||  |||||||||||||| | |||||| |||||||||||  |||||||||    
T  40518681 acccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttcta 40518613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 20870634 - 20870689
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||  ||||||||||    
T  20870634 ccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacct 20870689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 8918846 - 8918880
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||| ||||||||||||||||||||    
T  8918846 tttatgggtcctcttacttataaagtgttcaacct 8918880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 9482666 - 9482720
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||| ||||| ||  |||||||||||||| |||||||| |||||||||||    
T  9482666 caaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 9482720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35224721 - 35224779
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||| ||||||||||||||||||||   |||||| ||| ||||| |||||    
T  35224721 gacaccacatcttcacccaaaatcttaaggcattatgtttatgcgtcatctcagttata 35224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 9483246 - 9483303
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || ||  |||||||||||||| |||||||| |||||||||||    
T  9483246 acccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacct 9483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 18372053 - 18372110
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||| ||| ||| ||||||| |||||| |||||||| |||||||||||    
T  18372053 acccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacct 18372110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 34835574 - 34835517
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||  |||||||| ||| |||||||||||||| |||||||| ||||| |||||    
T  34835574 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 34835840 - 34835783
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||  |||||||| ||| |||||||||||||| |||||||| ||||| |||||    
T  34835840 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 209
Target Start/End: Original strand, 40417618 - 40417647
Alignment:
Q  180 ttataaagtgttcaacctccacttttctaa 209  Q
    ||||||||||||||||||||||||||||||    
T  40417618 ttataaagtgttcaacctccacttttctaa 40417647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 40417738 - 40417843
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    ||||||| ||||||||||||   |||||||||  || | |||||||||||| ||| || ||||| | ||| ||| ||||||||||| | ||||||||  |    
T  40417738 agagcaatcacacaagtgagagagacaccacacttttatccaaaatcttaacgcaatggatttacgagtcatcttacttataaagtatccaacctccttt 40417837  T
Q  203 tttcta 208  Q
    ||||||    
T  40417838 tttcta 40417843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 40518170 - 40518113
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||||||  |||||||||||  | |||||||| |||||||||||    
T  40518170 acccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacct 40518113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 41972234 - 41972189
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||    
T  41972234 tttatgggtcctatcacttataaggtgttcaacctttacttttcta 41972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 33832054 - 33832010
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttct 207  Q
    ||||| |||||||| |||||||||||||||||| || ||||||||    
T  33832054 tttataggtcctcttacttataaagtgttcaacttctacttttct 33832010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 34218806 - 34218890
Alignment:
Q  150 ttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacac 234  Q
    ||||| || |||||||||| ||  |||| |||||| | |||||||| |||||||||||||   || ||| |||||||||||||||    
T  34218806 ttaagacaatgaatttatgtgttatctctcttatataatgttcaacatccacttttctaatagatatgagacttctaactcacac 34218890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 29802677 - 29802549
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||  |||||||||||||||| || | ||||| ||||||||||||    
T  29802677 agagcaaccacacaagtgagttggacaccatatcttaacacaaaaccttaaggcattgggtttatgggtcctctcagttgtcaagtgctcaacctccact 29802578  T
Q  203 tttctaagcaatttgaaacttctaactca 231  Q
    ||   ||||||| ||| ||||||||||||    
T  29802577 ttatcaagcaatgtgagacttctaactca 29802549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 248
Target Start/End: Original strand, 41603213 - 41603356
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    |||||||| |||||||| ||| |||||| ||||| |||||||| |||||| || |   |||||||||| |||||||||||||||| ||||||||||||||    
T  41603213 agcaaccatacaagtgaattgtacaccaaatctttacccaaaaccttaagacactatgtttatgggtcttctcacttataaagtgctcaacctccacttt 41603312  T
Q  205 tctaagcaatttgaaacttctaactcacacatgcaacacaacac 248  Q
    || ||||||  ||  ||||||||||||||  ||| |||||||||    
T  41603313 tccaagcaacgtgggacttctaactcacatttgctacacaacac 41603356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 2041217 - 2041137
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttat 183  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||| ||||| ||||||||||    
T  2041217 agagcaaccacacaagtgagttggacaccacatcttcacccaaaaccttaaggcaatggatttacgggtcatctcacttat 2041137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 7147702 - 7147805
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaaca 242  Q
    ||||| |||||| |||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||  ||    
T  7147702 caaaaccttaagacattgggtttacgggtcctctcactta-aaagtgttcaacctccacttttctaagcaatgtgagacttctaactcacacttgctgca 7147800  T
Q  243 caaca 247  Q
    |||||    
T  7147801 caaca 7147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 31957636 - 31957544
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||   ||||||| | |||||||||||| | ||||||||    
T  31957636 agagcaaccacgcaagtgagttggacaccacatcttaacccaaaaccttaaggcattttgtttatggattctctcacttatatattgttcaac 31957544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 233
Target Start/End: Complemental strand, 23630459 - 23630310
Alignment:
Q  84 gatcatcgacactgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttat 183  Q
    ||||||| ||| ||| | |||||||| ||||||||||||  ||| | ||||  || ||||||| ||||||| | |||| |||||| ||| ||||||||||    
T  23630459 gatcatccacattggatgcagagcaagcacacaagtgagagggaaatcacacttttacccaaagtcttaagacgttgagtttatgagtcgtctcacttat 23630360  T
Q  184 aaagtgttcaacctccacttttctaagcaatttgaaacttctaactcaca 233  Q
    |||||||||||| | ||||||| |||||||| |   ||||||||||||||    
T  23630359 aaagtgttcaactttcacttttgtaagcaatgtagtacttctaactcaca 23630310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 37660829 - 37660960
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||| |||| ||||||||||||| |||||| || |||| |||||| ||||  |  ||| |||||| ||||||||||||||||   |||||||||| ||||    
T  37660829 agagtaaccgcacaagtgagttgaacaccatatattaatccaaaaccttatagagttggatttattggtcctctcacttatatgttgttcaaccttcact 37660928  T
Q  203 tttctaagcaatttgaaacttctaactcacac 234  Q
    |||  ||||||||||  |||||||||||||||    
T  37660929 ttttcaagcaatttgggacttctaactcacac 37660960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 15841388 - 15841493
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccac 201  Q
    ||||||||||||||||||||   |||| |||| ||||| ||||||| ||||||||| ||  ||||||  |||||||||||| ||||||||||||||||||    
T  15841388 agagcaaccacacaagtgagagagacatcacactctta-cccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctccac 15841486  T
Q  202 ttttcta 208  Q
    |||||||    
T  15841487 ttttcta 15841493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 760324 - 760220
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    ||||||||||||||| ||||   |||||||||  || ||| |||||||||||||| ||| ||||||||||||||||||||||||||  ||||||| || |    
T  760324 agagcaaccacacaaatgagagagacaccacacttttacc-aaaatcttaaggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatt 760226  T
Q  203 tttcta 208  Q
    ||||||    
T  760225 tttcta 760220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 30788354 - 30788285
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtc 172  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| |||||| ||||| |||||||||||    
T  30788354 agagcaaccactcaattgagttgaacaccacatcttaacccaaaaccttaagacattggatttatgggtc 30788285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 34544210 - 34544137
Alignment:
Q  135 tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||| || |||| ||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  34544210 tcttacccaaaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccacttttcta 34544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 53667333 - 53667443
Alignment:
Q  85 atcatcgacactgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    |||||| ||| |||| |||||||||| || |||||||||| |||||||||  | |||| |||| ||||| |||||| ||||||||||| | |||||||||    
T  53667333 atcatccacattgggctcagagcaacaacgcaagtgagttagacaccacacttcaacctaaaaccttaatgcattggatttatgggtcttgtcacttata 53667432  T
Q  185 aagtgttcaac 195  Q
    || | ||||||    
T  53667433 aaatattcaac 53667443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 28034305 - 28034260
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  28034305 tttatgggttctctcacttataaagtgttcaacctccacttttcta 28034260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 31894719 - 31894663
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||    
T  31894719 agagcaaccacacaagtgaattggacacaacatcttaacctaaaaacttaaggcatt 31894663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 10452335 - 10452438
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||||||||| |||||||||||| ||||||||| |||||  ||||  |||||||||  | |||||||||||||||  ||||| |||||| ||| |||| |    
T  10452335 agagcaaccatacaagtgagttgaacaccacattttaactaaaaactttaaggcatgaagtttatgggtcctctcttttatatagtgttaaacatccatt 10452434  T
Q  203 tttc 206  Q
    ||||    
T  10452435 tttc 10452438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 11348396 - 11348447
Alignment:
Q  151 taaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  11348396 taaggcaatgaatatatggatcctctcacttataaagtgttcaacctccact 11348447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 9965980 - 9965910
Alignment:
Q  113 cacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||||||||||| ||  |||||||||||  |||||||||||||  ||||||||| ||||    
T  9965980 cacaagtgagttggacaccacatctcaa-acaaaatcttaatccattgaatttatgtatcctctcacatata 9965910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 23210821 - 23210916
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||| ||||| | ||| ||||| | | ||||||| |||||||||| |||| ||||    
T  23210821 aaccatacaagtgagttggacatcacatcttaa-cctaaatcttaagacattg-agttacgggtcttataacttatatagtgttcaacatccattttt 23210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 36572120 - 36572063
Alignment:
Q  138 taacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||||||| ||||||||| || ||||||||||| ||| |||||||| |||||||||    
T  36572120 taacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaac 36572063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 43119434 - 43119491
Alignment:
Q  157 attgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaat 214  Q
    |||||||||||| ||| | ||| |||||||||||||||| |||| |||||||||||||    
T  43119434 attgaatttatgagtcttttcatttataaagtgttcaacatccaattttctaagcaat 43119491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 49880259 - 49880202
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  49880259 acccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacct 49880202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 50002525 - 50002468
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || || ||||||||||||||| ||||| ||||||||||||||    
T  50002525 acccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacct 50002468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 50630812 - 50630869
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  50630812 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacct 50630869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 18975836 - 18975927
Alignment:
Q  113 cacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||| ||||||  ||||||||| || | ||||||||||| |   |||||||||| | || ||||| ||||||||||||||||||||||||||    
T  18975836 cacaattgagttaaacaccacatatttatccaaaatcttacgtg-ttgaatttatagatcatctcatttataaagtgttcaacctccactttt 18975927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 30249839 - 30249707
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatctt-aaggcattgaatttatgggtcctctcacttataaagtgttcaacctccac 201  Q
    ||||||||||||||||||| ||||||| |||   ||||||||||| ||| ||| || ||| ||| || ||  ||| ||||||||| | | |||||||||     
T  30249839 agagcaaccacacaagtgatttggacatcactctttaacccaaaaccttaaagacaatgagtttttgagttatctaacttataaaatatccaacctccaa 30249740  T
Q  202 ttttctaagcaatttgaaacttctaactcacac 234  Q
    || | |||||||| || ||||||||||| ||||    
T  30249739 ttatttaagcaatgtggaacttctaacttacac 30249707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 36629336 - 36629268
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||| ||||| ||| |  |||||||||    
T  36629336 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttcta 36629268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 52885001 - 52884929
Alignment:
Q  126 gacaccacat-cttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||| |||| ||||||| ||||||||| ||  ||||||| |||||| |||||||| |||||||||||    
T  52885001 gacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacct 52884929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 18637234 - 18637151
Alignment:
Q  111 cacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaa 194  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||  |||   ||||||| || |||||||||||| | |||||||    
T  18637234 cacacaagtgacttgaacattacatcttaacccaaaatcttaatacatcagatttatgagttctctcacttatacattgttcaa 18637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 19958091 - 19958056
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatctt 138  Q
    |||||||||||||| |||||||||||||||||||||    
T  19958091 agagcaaccacacatgtgagttggacaccacatctt 19958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 22028004 - 22028075
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||  | |||||||| ||||||||| |   |||||||||||||| |||||||| |||||||||||    
T  22028004 gacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacct 22028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 44620736 - 44620701
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctc 198  Q
    |||||||||||||| |||||||||||||||||||||    
T  44620736 tttatgggtcctcttacttataaagtgttcaacctc 44620701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 53203796 - 53203749
Alignment:
Q  178 acttataaagtgttcaacctccacttttctaagcaatttgaaacttct 225  Q
    ||||||||| |||| |||||||||||||||||||||| || |||||||    
T  53203796 acttataaaatgtttaacctccacttttctaagcaatgtgtaacttct 53203749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 23556933 - 23556991
Alignment:
Q  150 ttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||| ||||||| | |||| | ||||||| |||||||||||||||||||||    
T  23556933 ttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttttcta 23556991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 2741170 - 2741113
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| || | ||||||||||||| |||||||| || ||||||||    
T  2741170 acccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacct 2741113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3340906 - 3340849
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| ||| |||||||    
T  3340906 acccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacct 3340849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3341227 - 3341170
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||||  || |||  ||||||||||||| |||||||||||||| |||||    
T  3341227 acccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacct 3341170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 4955374 - 4955431
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||| ||||||| |||||||| |||||||||||    
T  4955374 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacct 4955431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 10370108 - 10370169
Alignment:
Q  186 agtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    ||||| |||||||||| ||||||| | || || |||||||||||||||| ||| ||||||||    
T  10370108 agtgtccaacctccacgtttctaaccgatgtggaacttctaactcacacttgctacacaaca 10370169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 15841072 - 15841109
Alignment:
Q  171 tcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  15841072 tcctctcacttataaaatgttcagcctccacttttcta 15841109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 31249938 - 31249983
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||| |||||||||||||||||| | ||| ||||||    
T  31249938 tttatgggtcctctaacttataaagtgttcaacattcacctttcta 31249983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 31691251 - 31691206
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataa 185  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  31691251 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataa 31691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 39404117 - 39404060
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||| ||  ||| |||||| ||||||| ||||||||||||||||||||    
T  39404117 acccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacct 39404060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 45496904 - 45496847
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || ||| ||||| |||||||| |||||||| |||||||||||    
T  45496904 acccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacct 45496847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 45834580 - 45834451
Alignment:
Q  116 aagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatt 215  Q
    ||||||||| |||||||||  | |||||| ||||||||||||  ||  ||||  |||  |||||||||||| |  |||||||||| |||||||| ||||     
T  45834580 aagtgagttagacaccacacttcaacccagaatcttaaggcaacgagcttataagtctgctcacttataaaataatcaacctccatttttctaaacaata 45834481  T
Q  216 tgaaacttctaactcacacatgcaacacaa 245  Q
    ||| |||| ||||  |||| ||| ||||||    
T  45834480 tgagacttttaaccaacacttgctacacaa 45834451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 53204129 - 53204242
Alignment:
Q  120 gagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaa 219  Q
    ||||| |||| |||||||| ||  || |||||||||||||   |||||| ||| ||||| ||||||| |||| ||||| | |||||||||  | | |||     
T  53204129 gagtttgacatcacatctttacgtaacatcttaaggcattaggtttatgagtcgtctcatttataaaatgtttaaccttcccttttctaaatattgtgag 53204228  T
Q  220 acttctaactcaca 233  Q
    ||||||||||||||    
T  53204229 acttctaactcaca 53204242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 54109011 - 54108955
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  54109011 acccaaaa-cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 54108955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 54936295 - 54936238
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||| || |||||||||||    
T  54936295 acccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacct 54936238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 3244508 - 3244576
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||  ||||| || ||| |||||||||||||| ||||||||  ||||||||||  |||||||||    
T  3244508 acccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttcta 3244576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 17675225 - 17675273
Alignment:
Q  111 cacacaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    |||||||||||||| ||||||||||||| |||| ||| |||||| ||||    
T  17675225 cacacaagtgagtttgacaccacatcttcaccctaaaccttaagtcatt 17675273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 21376802 - 21376698
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||| |||| |||||| ||||| | ||||||||||| | |||||||||| ||||   |||||| |  || ||| ||||||| |||||||| ||| ||||    
T  21376802 agcaagcacataagtgaattggatatcacatcttaactccaaatcttaagacattaggtttatgagagctttcatttataaaatgttcaacgtccgcttt 21376703  T
Q  205 tctaa 209  Q
    |||||    
T  21376702 tctaa 21376698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 53211557 - 53211613
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    |||||||||||||||||||||| ||||  ||||||| | ||||||  ||||||||||    
T  53211557 agagcaaccacacaagtgagttagacattacatcttcatccaaaacattaaggcatt 53211613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 54108634 - 54108578
Alignment:
Q  142 ccaaaatcttaaggcattgaattt-atgggtcctctcacttataaagtgttcaacct 197  Q
    |||||| ||||||||| ||||||| ||||||||| | |||||||| |||||||||||    
T  54108634 ccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacct 54108578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 55933181 - 55933237
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacc 196  Q
    ||||||||  |||||||| ||  |||||||||||||| |||||||| ||||||||||    
T  55933181 acccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc 55933237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 41857558 - 41857425
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  ||||| |||||| |||||||||  | ||| ||||||| |||| |||||| |  ||    
T  41857558 agcaaccacacaagtgagttgaacatcacatcttaacccaaaactttaagtcattgagtttatgggtgttatcatttataaaatgttaaacctctatatt 41857459  T
Q  205 tctaagcaatttgaaacttctaactcacacatgc 238  Q
    ||| | |||| ||||||||||| |||||||||||    
T  41857458 tcttaacaatgtgaaacttctatctcacacatgc 41857425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 50329354 - 50329428
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctc 177  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  50329354 agagcaaccaaacaagtgagtttgacaccacgtcttaacccaaaaccttaaggcattggatttatgggtcctctc 50329428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 2417419 - 2417322
Alignment:
Q  137 ttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacac 234  Q
    |||| |||||| ||||| ||||||| ||||| | | |||||||||||||| ||||||| ||||||||||||||||||   || |||||||||||||||    
T  2417419 ttaatccaaaaccttaaagcattgagtttatagattctctcacttataaaatgttcaatctccacttttctaagcaacaagagacttctaactcacac 2417322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 32930820 - 32930695
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatct-taaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||||  ||||||| ||||||||  | ||| |||||||| |||| |||||| |||||| ||| ||||||||||||| |||||||| || ||||||    
T  32930820 caaccacacatatgagttgaacaccacacgtaaactcaaaatctctaagacattgagtttatgagtcatctcacttataaaatgttcaacttctactttt 32930721  T
Q  206 ctaagcaatttgaaacttctaactca 231  Q
    |||| |||| | | ||||||||||||    
T  32930720 ctaaacaatataagacttctaactca 32930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 47964541 - 47964645
Alignment:
Q  104 gagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    |||||||||||||||||||   ||| ||||| ||||| ||||||| ||||||||| |   |||||||||||||||||||||| || |||||||||||||     
T  47964541 gagcaaccacacaagtgagagagacgccacactctta-cccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccaca 47964639  T
Q  203 tttcta 208  Q
    ||||||    
T  47964640 tttcta 47964645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 33153690 - 33153563
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||| ||||||||||||||||| |||| || ||||   ||||| ||||| || ||| ||| ||  |  |||  ||||||||||||||||||||||||||    
T  33153690 agcaaacacacaagtgagttggataccatattttaatttaaaattttaagacaatgagtttttgaattatcttgcttataaagtgttcaacctccacttt 33153591  T
Q  205 tctaagcaatttgaaacttctaactcaca 233  Q
    || ||||||| ||| ||||||||||||||    
T  33153590 tc-aagcaatatgagacttctaactcaca 33153563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 45717831 - 45717911
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttat 183  Q
    |||||||||| |||||| |||||||||||||||||| || ||||| | |||||||||  |||||||| || ||||||||||    
T  45717831 agagcaaccatacaagtaagttggacaccacatcttcactcaaaaccctaaggcatttgatttatggatcatctcacttat 45717911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 39336290 - 39336348
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||| ||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  39336290 ccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctcca 39336348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 50329715 - 50329645
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcc 173  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||   ||||| |||||| |||||    
T  50329715 agagcaaccacacaagtgggttggacaccacatcttcacccaaaagcttacaacattggatttattggtcc 50329645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 25317292 - 25317191
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||||||||||||||||    |||| |||  || |||||||| |||||||||   | |||||||||||||||| ||| |||||| ||||||||||||||    
T  25317292 agcaaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaacaagtttatgggtcctctcagttacaaagtgctcaacctccacttt 25317193  T
Q  205 tc 206  Q
    ||    
T  25317192 tc 25317191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 30399664 - 30399724
Alignment:
Q  171 tcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactca 231  Q
    |||||||||||||||| ||||||||||||| |||| ||| |||| || |||||||||||||    
T  30399664 tcctctcacttataaaatgttcaacctccaattttttaaacaatgtggaacttctaactca 30399724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 1454938 - 1455001
Alignment:
Q  107 caaccacacaagtgag-ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgg 169  Q
    |||| ||||||||||| ||| |||| ||||||| ||||||||||||||| ||||||||||||||    
T  1454938 caacaacacaagtgagattgaacacaacatctttacccaaaatcttaagacattgaatttatgg 1455001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 21867968 - 21868071
Alignment:
Q  103 agagcaaccacacaa-gtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccac 201  Q
    ||||||| ||||||| ||||||||||||||||||||| | |  ||| ||||||||||||  ||| ||||||||||||| ||||   || |||||||| ||    
T  21867968 agagcaatcacacaaagtgagttggacaccacatcttcatcacaaaccttaaggcattggctttgtgggtcctctcacctatatgttgctcaacctcgac 21868067  T
Q  202 tttt 205  Q
    ||||    
T  21868068 tttt 21868071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 12749245 - 12749207
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccac 201  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  12749245 tttatgggtcctcacacttataaagtgttcaacctccac 12749207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 39335991 - 39336088
Alignment:
Q  102 cagagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcc 199  Q
    |||||||| |||||||| |||   ||||||||| ||||| ||||||| ||||||||| ||| |||||| ||| | ||| ||||||||||||||||||||    
T  39335991 cagagcaatcacacaagcgagagagacaccacactctta-cccaaaaccttaaggcaatgattttatgagtcttatcatttataaagtgttcaacctcc 39336088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 32589802 - 32589745
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  32589802 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 32589745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 43346850 - 43346907
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||| ||||||||| |||| |||||||| |||||||||||    
T  43346850 acccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacct 43346907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 12114621 - 12114689
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| |||||| || ||  |||||||||||||| |||||||| |||||||||||  |||||||||    
T  12114621 acccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttcta 12114689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 21832402 - 21832470
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||  ||| |||||| ||||||| |||||||| |||||||||||  |||||||||    
T  21832402 acccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttcta 21832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 47964974 - 47965042
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||||| ||   ||||| | ||||||||||||| | |||| ||||||||||||||||    
T  47964974 acccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttcta 47965042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 4823754 - 4823703
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgtt 191  Q
    |||||||||||||||||| ||| |||||||||||||  |||||||| |||||    
T  4823754 acccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtt 4823703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 35946635 - 35946564
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||  || |||||||| |||||||||  |  |||||||||||||| |||||||| |||||||||||    
T  35946635 gacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacct 35946564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 46546387 - 46546450
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttc 206  Q
    ||||| ||||||||| ||  ||||||| | |||| |||||||||||||||||||||||| ||||    
T  46546387 caaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacctccacatttc 46546450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 41359791 - 41359881
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||| |||   ||| ||||||  | |||||||| ||||||||| ||  |||||||||||||| |||||||| || ||||||||    
T  41359791 caaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacct 41359881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 3384325 - 3384382
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||  |||||||||| | ||||||||||||||  ||||||||||||| |||||    
T  3384325 acccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacct 3384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 15772951 - 15772898
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||| ||||| ||| ||| |||||||||||||| |||||||| |||||||||    
T  15772951 ccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaac 15772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 22304668 - 22304611
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| || ||||||||    
T  22304668 acccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacct 22304611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 26605729 - 26605778
Alignment:
Q  149 cttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctc 198  Q
    ||||||||||||||||| || |||||||||||||||   |||||||||||    
T  26605729 cttaaggcattgaatttttgtgtcctctcacttatacgttgttcaacctc 26605778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 33362352 - 33362409
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||| | ||  |||||||||||||| |||||||| || ||||||||    
T  33362352 acccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacct 33362409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 37991036 - 37991093
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||  ||| ||||| |||||||| |||||||| |||||||||||    
T  37991036 acccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacct 37991093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 42342447 - 42342504
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || || ||||||||||||||| |||||||| ||||| |||||    
T  42342447 acccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacct 42342504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 52635039 - 52634994
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataa 185  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||||    
T  52635039 acccaaaatcttaaggcaatgagtttatgggtcctcttatttataa 52634994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 6087777 - 6087809
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacat 135  Q
    |||||||||||||||||||||| ||||||||||    
T  6087777 agagcaaccacacaagtgagtttgacaccacat 6087809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 9240243 - 9240195
Alignment:
Q  145 aaatcttaaggcattgaatttatgggtcctctcacttataaagtgttca 193  Q
    ||||||||||| | || ||||||||||||||| |||||||| |||||||    
T  9240243 aaatcttaaggtaatggatttatgggtcctcttacttataaggtgttca 9240195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 39183206 - 39183131
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||| | ||||||||||| |||| ||| |||||| |||| ||| |||||||  | |||||||||    
T  39183206 aaccacacaagtgagtttggcaccacatcttcaccctaaaccttaagtcatt-aatatatgggttatatcacttata 39183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 39903742 - 39903662
Alignment:
Q  154 ggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacac 234  Q
    |||| ||||||||| |||| || ||||| |||| ||||||| ||||||||||||||   || ||| |||| ||||||||||    
T  39903742 ggcagtgaatttataggtcatcacacttgtaaaatgttcaatctccacttttctaattgatatgagacttttaactcacac 39903662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 39914349 - 39914293
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctc 198  Q
    ||||||| ||||||||||   |||||||||||||| | |||||| ||||||||||||    
T  39914349 ccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctc 39914293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 40056667 - 40056592
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||| ||||||||||||| |||  ||| |||||| |||| ||| |||||||  | |||||||||    
T  40056667 aaccacacaagtgagtttgacaccacatcttcaccataaaccttaagtcatt-aatatatgggttatatcacttata 40056592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 34661611 - 34661775
Alignment:
Q  83 tgatcatcgacactgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcactta 182  Q
    |||||||| | | ||||||||||||||||| |||||||||   | |||||||  |||||  |||| |||||| || |  || ||||||| |||| |||||    
T  34661611 tgatcatccatattgggttcagagcaaccatacaagtgagacagccaccacactttaacgtaaaaccttaagacaatatatgtatgggttctcttactta 34661710  T
Q  183 taaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    ||||||| |||||||||||||||||||| ||| ||| | ||||||||||||| ||| ||||||||    
T  34661711 taaagtgatcaacctccacttttctaagtaatgtgagatttctaactcacacttgctacacaaca 34661775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 214
Target Start/End: Original strand, 5034843 - 5034954
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccact 202  Q
    ||||||||||||||||||| ||| |||||| || || | |||||| |||||  |||||| || ||||||| |||||||||||||||| ||||||||||||    
T  5034843 agagcaaccacacaagtgaattgtacaccatatttttatccaaaaccttaaaacattgagttgatgggtcatctcacttataaagtggtcaacctccact 5034942  T
Q  203 tttctaagcaat 214  Q
    |||| |||||||    
T  5034943 tttccaagcaat 5034954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 12092503 - 12092609
Alignment:
Q  102 cagagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||||||| ||||||||||   ||||||||| ||||| | ||||| ||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||    
T  12092503 cagagcaacctcacaagtgagagagacaccacagtctta-ctcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctcca 12092601  T
Q  201 cttttcta 208  Q
    ||||||||    
T  12092602 cttttcta 12092609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 6071229 - 6071163
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  6071229 ccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttttcta 6071163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 20848452 - 20848353
Alignment:
Q  107 caaccacacaagtgagttggacaccacatctt-aacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||||| |||||| |||||||||| || || ||| ||||||||| ||||| ||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  20848452 caaccacacaaatgagtttgacaccacatttttaatccagaatcttaagacattggatttatgcgtcctcttacttataaaatgttcaacctccattttt 20848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 8482025 - 8481960
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||    
T  8482025 acccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccactttt 8481960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 28033236 - 28033328
Alignment:
Q  111 cacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||||||| ||||||||||  | ||||||||||||||||||||| |||| ||||||||||| ||  |||||||||||||||| |||| |||||    
T  28033236 cacacaagttagttggacactgcgtcttaacccaaaatcttaaggtattg-atttatgggtcttcgtacttataaagtgttcagcctctacttt 28033328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 10074389 - 10074490
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||| ||||||   ||||||||| ||||| ||||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||  ||||||    
T  10074389 caaccacactagtgagagagacaccacactctta-cccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactttt 10074487  T
Q  206 cta 208  Q
    |||    
T  10074488 cta 10074490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3409358 - 3409301
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  3409358 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 3409301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 10073642 - 10073742
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||| ||||||   ||||||||| ||||| |||||||||||||| || ||| ||||||| |||||| |||||||| |||||||||||  ||||||    
T  10073642 caaccacactagtgagagagacaccacactctta-cccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttactttt 10073740  T
Q  206 ct 207  Q
    ||    
T  10073741 ct 10073742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 5035343 - 5035431
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgtt 191  Q
    |||||||| |||||||||||||| |||||||||||| | |||||| |||||   |||| |||| ||| | |||||||||||||| ||||    
T  5035343 agagcaacaacacaagtgagttgaacaccacatctttatccaaaaacttaaaatattgtatttgtggattctctcacttataaaatgtt 5035431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 11328952 - 11328889
Alignment:
Q  175 ctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgc 238  Q
    ||||||||||||||||||||  |||| ||| ||||||||| ||| |||| ||||||||||||||    
T  11328952 ctcacttataaagtgttcaaattccattttactaagcaatgtgatacttgtaactcacacatgc 11328889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 34900626 - 34900669
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaat 148  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  34900626 agcaaccacacaagtgagttggacaccacatcttcacctaaaat 34900669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 10074036 - 10074118
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||  || |||||||| ||||||||| ||  |||||||||||||| |||||||| ||||||||| |  |||||||||    
T  10074036 gacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttcta 10074118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 405043 - 405112
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtc 172  Q
    |||||||||||  |||||||||| |||||||| ||||||| ||||  ||||||| |||| ||||||||||    
T  405043 agagcaaccactaaagtgagttgaacaccacaccttaacctaaaactttaaggctttgattttatgggtc 405112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 2377853 - 2377796
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  2377853 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 2377796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 2578502 - 2578559
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||  ||  |||||||||||||| ||||||||||||||||||||    
T  2578502 acccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacct 2578559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 3624890 - 3624849
Alignment:
Q  119 tgagttggacaccacatcttaacccaaaatcttaaggcattg 160  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  3624890 tgagttggacaccacgtcttaacccaaaattttaaggcattg 3624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 16454672 - 16454619
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||||||||||||| ||  |||||||||||||| |||||||| |||||||||    
T  16454672 ccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 16454619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 35210303 - 35210246
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  35210303 acccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacct 35210246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 3075926 - 3075982
Alignment:
Q  101 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggca 157  Q
    ||||||||||||||| | |||||||||||| |||  ||||| |||||||||||||||    
T  3075926 tcagagcaaccacacgattgagttggacacgacactttaactcaaaatcttaaggca 3075982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 1846845 - 1846790
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||| ||||||||| || |||||||||| |||| |||||||| |||||||||||    
T  1846845 ccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacct 1846790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 2579917 - 2579988
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||  | |||||||| ||||||||  ||  |||||||||||||| |||||||| |||||||||||    
T  2579917 gacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacct 2579988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 33605724 - 33605685
Alignment:
Q  169 ggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  33605724 ggtcttctcaattataaagtgttcaacctccacttttcta 33605685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 14748397 - 14748454
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||| ||| ||| |||||||||||||| | |||||| |||||||||||    
T  14748397 acccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacct 14748454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 29028222 - 29028161
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatg 168  Q
    |||||| |||||| ||||||||||||||||||||| |||||  ||| | |||||| ||||||    
T  29028222 caaccatacaagtaagttggacaccacatcttaactcaaaacattaggacattgagtttatg 29028161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 29518602 - 29518545
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||| | ||  |||||||||||||| |||||||| |||||||||||    
T  29518602 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacct 29518545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 29519019 - 29518962
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||| | ||  |||||||||||||| |||||||| |||||||||||    
T  29519019 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacct 29518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 31714765 - 31714701
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||| ||||||||| ||| || ||||||||||||| ||||| |  ||||||||||||||||||||    
T  31714765 caaaaccttaaggcaatgagttaatgggtcctctca-ttatataacgttcaacctccacttttcta 31714701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 32460639 - 32460696
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||| ||||||| |||||||| |||||||||||    
T  32460639 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacct 32460696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 32741278 - 32741221
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||| | ||  |||||||||||||| |||||||| |||||||||||    
T  32741278 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacct 32741221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 1475262 - 1475318
Alignment:
Q  150 ttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttc 206  Q
    ||||||||||  |||||| |||||| ||||||||||| |||||||| | ||||||||    
T  1475262 ttaaggcattagatttataggtcctttcacttataaaatgttcaacattcacttttc 1475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 18089922 - 18089978
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    |||||||| ||| | ||||| | ||||||||||||| |||||||| |||||||||||    
T  18089922 agagcaactacagaggtgagattgacaccacatcttcacccaaaaccttaaggcatt 18089978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 208
Target Start/End: Complemental strand, 33606034 - 33606006
Alignment:
Q  180 ttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||||||||||||||||||    
T  33606034 ttataaagtgttcaacctccacttttcta 33606006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 23714886 - 23714939
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattg 160  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23714886 caaccacacaagtgagttggacaccacatcttcacccaaaatcttaaggcattg 23714939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 42282101 - 42282146
Alignment:
Q  164 ttatgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42282101 ttatgggtcctttcacttataaagtgttcaacctccacttttctaa 42282146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 28855780 - 28855884
Alignment:
Q  128 caccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaa 227  Q
    ||||||||||| |||| ||| |||||||||||  ||||||| | | | |||||||||||||  ||||||| |||||||| ||||||| | | ||||||||    
T  28855780 caccacatctttacccgaaaccttaaggcattagatttatgaggcatgtcacttataaagtactcaaccttcacttttccaagcaatgtcagacttctaa 28855879  T
Q  228 ctcac 232  Q
    |||||    
T  28855880 ctcac 28855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 7517712 - 7517622
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||||||   ||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  7517712 caaccacacaagtgagacagacaccacactctta-cccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 7517622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 37533056 - 37533126
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||| ||| |||||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  37533056 gacaccaca-ctttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 37533126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 1085675 - 1085732
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||||||    
T  1085675 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacct 1085732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 37533423 - 37533480
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| || ||||||||||||||| |||||||| |||||||||||    
T  37533423 acccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacct 37533480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3114464 - 3114556
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||||||||||||||||||  |||| ||||||| |||| ||||| | || ||||||   || ||||||||| ||||||||||    
T  3114464 agcaaccatacaagtgagttggacaccacactttaatccaaaatattaaagcatttagttcatgggtttccttacttataaattgttcaacct 3114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 36939779 - 36939847
Alignment:
Q  127 acaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    ||||||||  || |||||||| ||||||||| || ||||||||||||||| |||||||| |||||||||    
T  36939779 acaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaac 36939847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 11845288 - 11845233
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||| ||||||||| || ||||||||||||||| |||||||| |||||||||||    
T  11845288 ccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacct 11845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 19122863 - 19122773
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||  || | ||||||||| ||||| ||||||| ||||||||| || ||||||| ||||||| |||||||| |||||||||||    
T  19122863 caaccacacaagcaagatagacaccacactctta-cccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacct 19122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 22566721 - 22566778
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  22566721 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 22566778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 22567102 - 22567155
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  22567102 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 22567155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 29157664 - 29157607
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| || ||||||||||| ||| |||||||| |||||||||||    
T  29157664 acccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacct 29157607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 30245176 - 30245119
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||| |||||||||| ||| |||||||| |||||||||||    
T  30245176 acccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacct 30245119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 33773338 - 33773281
Alignment:
Q  137 ttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaa 194  Q
    |||||||||||||||||  ||||  |||||||||||||||||| ||||||| ||||||    
T  33773338 ttaacccaaaatcttaaaacattagatttatgggtcctctcacatataaagcgttcaa 33773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 37345994 - 37345949
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  37345994 tttatgggtcttctcacttataaaatgtttaacctccacttttcta 37345949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 45434735 - 45434678
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| | | |||||||||||||| |||||||| |||||||||||    
T  45434735 acccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacct 45434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 10341903 - 10341863
Alignment:
Q  168 gggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  10341903 gggttctcccacttataaagtgttcaacctccacttttcta 10341863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 42730392 - 42730308
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    |||||||||| | ||| ||||||| || |||||||||||||||| || | || || ||||||||||||| || ||| ||||||||    
T  42730392 tttatgggtcttttcatttataaaatgatcaacctccacttttcaaaccgatgtggaacttctaactcagacttgctacacaaca 42730308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 4124149 - 4124216
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    |||||| ||||| ||| ||| ||||| ||||||||||||||||||||||  |||||| | ||||||||    
T  4124149 ccaaaaccttaatgcaatgagtttattggtcctctcacttataaagtgtcaaacctcaaattttctaa 4124216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 6054659 - 6054604
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||    
T  6054659 acccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaac 6054604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 30244402 - 30244312
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||||||   ||||||||| |||| |||||||| ||||||||| ||  |||||| ||||||| |||||||| || ||||||||    
T  30244402 caaccacacaagtgagagagacaccacactctt-acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacct 30244312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 45679478 - 45679557
Alignment:
Q  126 gacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||||  ||||||||||  |||||| ||| | ||||| |||||||||||||||||||| | |||| |||| ||||    
T  45679478 gacaccacattataacccaaaactttaaggtattaagtttataggtcctctcacttataaagtatccaacatccattttt 45679557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 22768538 - 22768616
Alignment:
Q  106 gcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    |||||||||||| |||||| |||||||||| || |  ||||| ||||||||||||  | || ||||||||||| |||||    
T  22768538 gcaaccacacaaatgagttagacaccacatgttcaatcaaaaccttaaggcattgggtatacgggtcctctcatttata 22768616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 32567963 - 32568017
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    ||||||||  ||||||  |||||||||||||||||||| |||| |||||||||||    
T  32567963 agcaaccatgcaagtggattggacaccacatcttaacctaaaaccttaaggcatt 32568017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 40639707 - 40639585
Alignment:
Q  100 ttcagagcaaccacacaagtgagttggacaccacatctt-aacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctc 198  Q
    |||| |||| ||||| |||||||||| | || ||| ||| ||||||||| || |||  ||||||||||| | |||| ||| || |||| ||||||| |||    
T  40639707 ttcaaagcagccacataagtgagttgaatactacacctttaacccaaaacctaaagatattgaatttattgatcctatcaattctaaaatgttcaatctc 40639608  T
Q  199 cacttttctaagcaatttgaaac 221  Q
    | ||||||||| |||| ||||||    
T  40639607 cccttttctaatcaatgtgaaac 40639585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 23436 - 23493
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| |   |||||||||||||| |||||||| |||||||||||    
T  23436 acccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacct 23493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 7192847 - 7192786
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatg 168  Q
    ||||| || |||||||||||||| |||||||| || ||||| |||||| |||||| ||||||    
T  7192847 caacctcagaagtgagttggacatcacatctttactcaaaaccttaagacattgagtttatg 7192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 45335508 - 45335585
Alignment:
Q  123 ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||||||||||||||   || || ||||||||||    ||||||||| ||||||||||||||||| ||||| ||||    
T  45335508 ttggacaccacatcttaggtcacaaccttaaggcataatgtttatgggttctctcacttataaagtgctcaacatcca 45335585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 15902363 - 15902335
Alignment:
Q  176 tcacttataaagtgttcaacctccacttt 204  Q
    |||||||||||||||||||||||||||||    
T  15902363 tcacttataaagtgttcaacctccacttt 15902335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 32446028 - 32445910
Alignment:
Q  96 tgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||| |||||||||  |||||||||   |||||||||  ||||||||||| |||||||| |||  ||||||||||||||||||| |||||||  | ||    
T  32446028 tgggttgagagcaacctaacaagtgagagagacaccacactttaacccaaaaccttaaggcgttgggtttatgggtcctctcacttgtaaagtgcaccac 32445929  T
Q  196 ctccacttttctaagcaat 214  Q
    |||| ||| ||||||||||    
T  32445928 ctcctcttctctaagcaat 32445910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 31866026 - 31866128
Alignment:
Q  131 cacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactc 230  Q
    |||||||| | |||||| ||||||| |||||||||||||||| ||||||||||||| ||||  || ||||||||   ||||||| ||| |||| ||||||    
T  31866026 cacatctttatccaaaaccttaaggaattgaatttatgggtcttctcacttataaaatgtttcacttccactttcacaagcaatgtgagacttttaactc 31866125  T
Q  231 aca 233  Q
    |||    
T  31866126 aca 31866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 31509710 - 31509654
Alignment:
Q  152 aaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttcta 31509654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 31509818 - 31509762
Alignment:
Q  152 aaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  31509818 aaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttcta 31509762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 41632881 - 41632813
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||| |||||||||||  |||||||||    
T  41632881 acccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttcta 41632813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 2828156 - 2828061
Alignment:
Q  137 ttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcac 232  Q
    ||||||||||| |||||||||||  | |||||| |  | ||||||||||||||| ||||||||||||||||||   || ||| |||||||||||||    
T  2828156 ttaacccaaaaccttaaggcattagacttatggattatttcacttataaagtgtacaacctccacttttctaaatcatgtgacacttctaactcac 2828061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 26074748 - 26074654
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||||||| ||||||   ||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  26074748 agagcaaccacactagtgagagagacaccacactctta-cccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 26074654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 26590972 - 26591035
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttc 206  Q
    ||||| ||||||||||||||||||||| |||||| |||||||| |||||||||||  |||||||    
T  26590972 caaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttc 26591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 9498713 - 9498770
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  9498713 acccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 9498770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 9510544 - 9510673
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttt 204  Q
    ||||||||||||||| ||   ||||| | || || ||| ||||| ||||||||||   ||||||| ||||||||||||||||    ||||||||||||||    
T  9510544 agcaaccacacaagtaagagagacactatatttttacctaaaattttaaggcattaggtttatggctcctctcacttataaatgactcaacctccacttt 9510643  T
Q  205 tctaagcaatttgaaacttctaactcacac 234  Q
    ||||  |||| |||||| | ||||||||||    
T  9510644 tctattcaatgtgaaacatataactcacac 9510673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 19275627 - 19275560
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||||||||| || |||||||||||||| |||  ||||| |||||||||||||| |||||||||    
T  19275627 acccaaaatcttaagacaatgaatttatgggtcttcttccttat-aagtgttcaacctctacttttcta 19275560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 26075216 - 26075278
Alignment:
Q  135 tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||| |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  26075216 tctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 26075278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 10351242 - 10351339
Alignment:
Q  150 ttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    ||||| || ||| |||||||||| | |||| |||||| |||||||||||| ||||| ||  |||| ||| |||||||||| |||| ||| ||||||||    
T  10351242 ttaagacaatgagtttatgggtcatttcacgtataaaatgttcaacctccgcttttttagccaatgtgagacttctaacttacacttgccacacaaca 10351339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 18603179 - 18603236
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  18603179 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 18603236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 36521955 - 36522023
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||| |   |||||||||||||||| ||| | ||||||||||||| |||||||||    
T  36521955 acccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaacttttcta 36522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 6557471 - 6557514
Alignment:
Q  166 atgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||    
T  6557471 atggatcctctcacttataaagtgctcaacctacacttttctaa 6557514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 25328034 - 25327979
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||||||| |||||||||||   |||||||||||||| |||||||| |||||||||    
T  25328034 acccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaac 25327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 33747868 - 33747813
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||||||| || |||||    
T  33747868 ccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacct 33747813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 36522319 - 36522390
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacac 234  Q
    ||||| |||||||||||||||||| |||||||| |||| |||||||  |||| ||| || | ||||||||||    
T  36522319 tttattggtcctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatataactcacac 36522390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 38015864 - 38015943
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||| |||||||||||| | |||| |||| ||| ||||||||||||||| ||||  || |||| ||| |||||||||||    
T  38015864 agcaagcacacaagtgagattgacatcacaacttcacccaaaatcttaagtcattagatatatgagtcatctcacttata 38015943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 35150138 - 35150049
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||| ||||||   |||||||||  || |||||||| |||||| || || |||||||||| |||| |||||||| |||||||||||    
T  35150138 caaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaacct 35150049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 1028599 - 1028644
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||    
T  1028599 tttatgggtcctcttacttataaagtgttcatcctttacttttcta 1028644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 6224291 - 6224238
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||| ||||||||  ||| |||||||||||||| |||||||| |||||||||||    
T  6224291 aaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacct 6224238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 9048755 - 9048710
Alignment:
Q  114 acaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    ||||||||| | ||||||||||||| | ||||||||||||||||||    
T  9048755 acaagtgagattgacaccacatcttcatccaaaatcttaaggcatt 9048710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 15370198 - 15370141
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||  || ||||||||||||||| ||||||||  ||||||||||    
T  15370198 acccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacct 15370141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 40296374 - 40296431
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| || |||||| ||  |||||||||||||| |||||||| |||||||||||    
T  40296374 acccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 40296431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 41170733 - 41170676
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||  ||||||||||    
T  41170733 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacct 41170676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 4958353 - 4958262
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    ||||||| ||||||||||||||| |  | ||| ||| ||||||||||||||| |||  | ||||||||||||| || ||||| | ||||||||    
T  4958353 agagcaatcacacaagtgagttgaagtc-acacctttacccaaaatcttaagacatgaagtttatgggtcctcacatttatatattgttcaac 4958262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 1188608 - 1188715
Alignment:
Q  101 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    |||||||||||||| |||||||   ||| |||||  || |||||||| ||||| ||| ||| |||||| ||| ||||||||||||| | |||||||||||    
T  1188608 tcagagcaaccacataagtgagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctcca 1188707  T
Q  201 cttttcta 208  Q
    ||||||||    
T  1188708 cttttcta 1188715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 26661548 - 26661638
Alignment:
Q  107 caaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||| |||   ||||||||| |||| |||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  26661548 caaccacacaagcgagagagacaccacactctt-acccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacct 26661638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 2229264 - 2229416
Alignment:
Q  85 atcatcgacactgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    |||||| ||| | |||| ||||||||||||||| | ||| | ||||||||||||||| |||||  ||||||||||   |||||| |||||||||||||||    
T  2229264 atcatctacattaggttgagagcaaccacacaactcagtcgaacaccacatcttaactcaaaactttaaggcatttggtttatgagtcctctcacttata 2229363  T
Q  185 a-----agtgttcaacctccacttttctaagcaatttgaaacttctaactcac 232  Q
    |     |||| |||||||| | ||||||||| ||  ||  |||||||||||||    
T  2229364 atataaagtggtcaacctcaaattttctaagtaacgtgggacttctaactcac 2229416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 47057726 - 47057809
Alignment:
Q  101 tcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||||||||||| | |||||||||| ||||||||  ||||| | |||  | ||| ||||||||||||||||    
T  47057726 tcagagcaaccacacaagtgagttgtataccacatcttcacccaaaactttaagactttgggtatataggtcctctcacttata 47057809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 1187426 - 1187488
Alignment:
Q  143 caaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    ||||||||||||| | ||| |||||||||| ||||||||||||| |||| |||||||||||||    
T  1187426 caaaatcttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctccactttt 1187488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 17294676 - 17294619
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||||||    
T  17294676 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacct 17294619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 24448374 - 24448309
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttct 207  Q
    ||||||||||||| || ||| |||||| | ||||||||||||||| |||||||| |||||||||||    
T  24448374 ccaaaatcttaagacaatgagtttatgagccctctcacttataaaatgttcaacttccacttttct 24448309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 30208284 - 30208187
Alignment:
Q  82 gtgatcatcgacactgggttcagagcaaccacacaagtgagtt-ggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctca 178  Q
    |||| |||| ||| |||| |||||||||||   |||||||||| ||||||||||  ||||||||||| ||||| ||||||| |||| |||||||||||    
T  30208284 gtgaccatccacattgggctcagagcaacctggcaagtgagtttggacaccacactttaacccaaaaccttaatgcattgagtttaagggtcctctca 30208187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 30576598 - 30576707
Alignment:
Q  96 tgggttcagagcaaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaac 195  Q
    |||| |||||||||| |||||||||||   ||||  |||| || ||||||||  ||||| ||||   | |||||||||||||||| ||||||||||||||    
T  30576598 tgggctcagagcaacaacacaagtgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaac 30576697  T
Q  196 ctccactttt 205  Q
    ||| ||||||    
T  30576698 ctctactttt 30576707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 5320024 - 5320092
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| |  |||||||||    
T  5320024 acccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttcta 5320092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 10351259 - 10351191
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||||||||| | | ||  ||||||||| |||||||||||||||||||||||||| | |||||||    
T  10351259 acccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctctatttttcta 10351191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 17996014 - 17996118
Alignment:
Q  128 caccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaa 227  Q
    ||||||||||| |||| ||| |||||||||||  ||||||| | | | || ||||||||||  ||||||| |||||||| ||||||| | | ||||||||    
T  17996014 caccacatctttacccgaaaccttaaggcattagatttatgaggcatgtcgcttataaagtactcaaccttcacttttccaagcaatgtcagacttctaa 17996113  T
Q  228 ctcac 232  Q
    |||||    
T  17996114 ctcac 17996118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 8240396 - 8240467
Alignment:
Q  114 acaagtgagttggacaccacatcttaacccaaaatct-taaggcattgaatttatgggtcctctcacttata 184  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||| | |||| | |||| |||||||||    
T  8240396 acaagtgagttggacaccacatcttaacccaaaacctgaaaggcattggacttattgatcctttcacttata 8240467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 44290870 - 44290941
Alignment:
Q  127 acaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||| |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  44290870 acaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 44290941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 50081077 - 50081207
Alignment:
Q  103 agagcaaccacacaagtgagttggacac--cacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 200  Q
    ||||||||||||||||||||||||||||  ||||  |||||| ||||  || || || |   |||||  ||  ||||||||||||| |||||| ||||||    
T  50081077 agagcaaccacacaagtgagttggacacaccacactttaacctaaaactttgagacagtaggtttataagttttctcacttataaaatgttcagcctcca 50081176  T
Q  201 cttttctaagcaatttgaaacttctaactca 231  Q
    |||||  ||||||| || |||||||||||||    
T  50081177 ctttttcaagcaatgtggaacttctaactca 50081207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 8240630 - 8240728
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccactttt 205  Q
    |||||||| || ||||||||| |||||||||||||| || | ||||||  ||||||||||||  || | |||||||||   |||||||||| |||||||    
T  8240630 caaccacataaatgagttggataccacatcttaacctaataccttaagttattgaatttatgactcgtttcacttatatcttgttcaaccttcactttt 8240728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 19283516 - 19283582
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| ||||||||  ||| |||||| ||||||||| ||| |||||| ||||||||||||||||||    
T  19283516 ccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttcta 19283582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 43400621 - 43400691
Alignment:
Q  114 acaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||| ||||||||||| ||| |||| |||||  ||||||||||||| ||| | |||||||||    
T  43400621 acaagtgagttggtcaccacatcttcaccaaaaaccttaaaacattgaatttatgagtcatatcacttata 43400691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 7373408 - 7373363
Alignment:
Q  114 acaagtgagttggacaccacatcttaacccaaaatcttaaggcatt 159  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  7373408 acaagtgagttggacaccacatcttaaccaaaaattttaagacatt 7373363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 12772967 - 12772902
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    |||| |||||| || ||||||||||| | ||||||||||||||| |||||||||| | ||||||||    
T  12772967 aaaaccttaagacaatgaatttatggattctctcacttataaagcgttcaacctcaagttttctaa 12772902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 22793354 - 22793309
Alignment:
Q  163 tttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  22793354 tttatggatcctctcacttataaagttttcaacctctacttttcta 22793309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 32594775 - 32594832
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  32594775 acccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacct 32594832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 41157090 - 41157033
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||| ||| ||| |||||||||||||| |||||||| |||||||||||    
T  41157090 acccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacct 41157033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 48588547 - 48588604
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| |||||||| ||||| ||| |||||||| |||||||||||    
T  48588547 acccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacct 48588604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 22077554 - 22077622
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||||| ||||||||   || |||||||||||||| |||||||| |||||||||||  |||||||||    
T  22077554 acccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttcta 22077622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 41184493 - 41184541
Alignment:
Q  149 cttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    ||||||||| ||  |||||||||||||| ||||||||||||||||||||    
T  41184493 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacct 41184541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 44091971 - 44091936
Alignment:
Q  162 atttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||| |||||||||||||||||||||||||    
T  44091971 atttatgggttctctcacttataaagtgttcaacct 44091936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 3458679 - 3458767
Alignment:
Q  157 attgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaagcaatttgaaacttctaactcacacatgcaacacaaca 247  Q
    ||||||||||||| || ||||| |||||| ||| |||||||||| |||||| |||||| || ||||| |||||| ||| ||| ||||||||    
T  3458679 attgaatttatggatcatctcatttataacgtgctcaacctccatttttct-agcaatgtgtaacttttaactc-cacttgccacacaaca 3458767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 22077171 - 22077237
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 208  Q
    |||||| |||| |||| ||| |||||||||||||| |||||||| || ||||||||  |||||||||    
T  22077171 ccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttcta 22077237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 30207948 - 30207834
Alignment:
Q  96 tgggttcagagcaaccacacaagtgag-ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaa 194  Q
    |||| |||||||||||||||| ||||| ||||| ||||||   |||||||||| ||||||||| ||  ||||||| |||||||||    |||||| ||||    
T  30207948 tgggctcagagcaaccacacaggtgagtttggataccacactgtaacccaaaaccttaaggcagtg-gtttatggatcctctcac----aaagtgctcaa 30207854  T
Q  195 cctccacttttctaagcaat 214  Q
    ||| ||||||| ||| ||||    
T  30207853 ccttcacttttataaacaat 30207834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 3808930 - 3808975
Alignment:
Q  105 agcaaccacacaagtgagttggacaccacatcttaacccaaaatct 150  Q
    |||||| | |||||||||||||||||||||| || |||||||||||    
T  3808930 agcaactatacaagtgagttggacaccacatgttcacccaaaatct 3808975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 14318966 - 14318909
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| |  ||||||||||| ||| |||||||| |||||||||||    
T  14318966 acccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacct 14318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 26661957 - 26662014
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| |   |||||||||| |||||||||||| |||||||||||    
T  26661957 acccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacct 26662014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 31767220 - 31767277
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| |||||||||||   || ||||||||||| |||||||| |||||||||||    
T  31767220 acccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacct 31767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 34365024 - 34364967
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||  ||  |||||||||||||| |||||||| |||||||||||    
T  34365024 acccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacct 34364967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 40082505 - 40082449
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||||||||||  |||||| |||||||| |||||||||||    
T  40082505 acccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacct 40082449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 44290517 - 44290574
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||  ||||||||||    
T  44290517 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacct 44290574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 7844554 - 7844629
Alignment:
Q  108 aaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    ||||||||||||||||| ||||||||||||| || | ||| |||||| |||| ||| |||||||  | |||||||||    
T  7844554 aaccacacaagtgagtttgacaccacatcttcactctaaaccttaagtcatt-aatatatgggttatatcacttata 7844629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 45839730 - 45839678
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttc 192  Q
    |||||||| |||||||||||  ||||||||||| ||| |||||||| ||||||    
T  45839730 acccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttc 45839678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 5454 - 5399
Alignment:
Q  142 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  5454 ccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 5399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 573 - 630
Alignment:
Q  140 acccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  573 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 3168 - 3108
Alignment:
Q  149 cttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttctaa 209  Q
    ||||||||| ||| ||||| | | ||||||||||||||||||  |||||||||||||||||    
T  3168 cttaaggcaatgagtttattgatgctctcacttataaagtgtataacctccacttttctaa 3108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 5870 - 5819
Alignment:
Q  146 aatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacct 197  Q
    |||||||||||| ||  |||||||||||||| |||||||| |||||||||||    
T  5870 aatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 5819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 13003 - 13055
Alignment:
Q  123 ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctc 177  Q
    |||||||||||||||||||| ||||||||||| ||  || |||||||||||||||    
T  13003 ttggacaccacatcttaaccaaaaatcttaagaca--gagtttatgggtcctctc 13055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 13709 - 13766
Alignment:
Q  123 ttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcactta 182  Q
    ||||||| |||||||||||| ||||||||| | ||  || ||||||||||||||||||||    
T  13709 ttggacagcacatcttaaccaaaaatcttatgaca--gagtttatgggtcctctcactta 13766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 41496 - 41550
Alignment:
Q  103 agagcaaccacacaagtgagttggacaccacatctt-aacccaaaatcttaaggc 156  Q
    |||||||||| |||||| ||||||| |||||||||| ||||||||| ||||||||    
T  41496 agagcaaccatacaagttagttggataccacatctttaacccaaaaccttaaggc 41550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 39524 - 39487
Alignment:
Q  171 tcctctcacttataaagtgttcaacctccacttttcta 208  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  39524 tcctctcacttataaggagttcaacctccacttttcta 39487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 15436 - 15513
Alignment:
Q  107 caaccacacaagtgagttggacaccacatcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttata 184  Q
    |||||| |||||  |||||||| ||||||||| | ||||||||||||| || ||||||||| | |||| | |||||||    
T  15436 caaccatacaagcaagttggacgccacatctttatccaaaatcttaagacaatgaatttatcgatccttttacttata 15513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 1754 - 1802
Alignment:
Q  144 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttc 192  Q
    |||| ||||||||| ||  ||||||||||||||||||||||| ||||||    
T  1754 aaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University