View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18947_high_29 (Length: 386)
Name: NF18947_high_29
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18947_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 14821680 - 14821856
Alignment:
| Q |
38 |
tacacaacaatttccataaccaaattatttggttctatttatgtttgagatgattaattttgtttttctttctgtaaatgcaaagcagggtgaagaagac |
137 |
Q |
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| T |
14821680 |
tacacaacaatttccataaccaaattatttggttctatttatgtttgagatgactgattttgtttttctttctgtaaatgcaaagcagggtgaagaagac |
14821779 |
T |
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| Q |
138 |
caaagagagtaatggctggggcattcaaaaagtgcatgatgctgtgttgcacaagcaagattgtctcggtatgttgt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14821780 |
caaagagagtaatggctggggcattcaaaaagtgcatgatgctgtgttgcacaagcaagattgtctcggtatgttgt |
14821856 |
T |
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