View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18947_high_46 (Length: 289)

Name: NF18947_high_46
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18947_high_46
NF18947_high_46
[»] chr2 (47 HSPs)
chr2 (74-282)||(39362013-39362221)
chr2 (1-54)||(13613166-13613219)
chr2 (1-57)||(32008958-32009014)
chr2 (1-53)||(43408584-43408636)
chr2 (1-59)||(12779604-12779662)
chr2 (1-55)||(18551326-18551380)
chr2 (1-59)||(23858030-23858088)
chr2 (1-59)||(37552231-37552289)
chr2 (1-57)||(13788128-13788184)
chr2 (1-57)||(23388451-23388507)
chr2 (1-57)||(28319652-28319708)
chr2 (1-57)||(30783344-30783400)
chr2 (1-57)||(32300457-32300513)
chr2 (1-57)||(41637624-41637680)
chr2 (1-57)||(41736178-41736234)
chr2 (1-55)||(27523019-27523073)
chr2 (4-57)||(28262370-28262423)
chr2 (1-57)||(1141542-1141598)
chr2 (1-53)||(7093578-7093630)
chr2 (5-57)||(8430302-8430354)
chr2 (1-57)||(15636808-15636864)
chr2 (1-57)||(29749476-29749532)
chr2 (1-57)||(31266360-31266416)
chr2 (5-57)||(32185838-32185890)
chr2 (1-57)||(37724065-37724121)
chr2 (1-57)||(37802451-37802507)
chr2 (1-53)||(44476448-44476500)
chr2 (2-57)||(27327622-27327677)
chr2 (1-55)||(14757194-14757248)
chr2 (1-55)||(28841415-28841469)
chr2 (1-57)||(18916473-18916529)
chr2 (1-57)||(20065147-20065203)
chr2 (5-57)||(21293788-21293840)
chr2 (1-57)||(22140437-22140493)
chr2 (5-53)||(26243398-26243446)
chr2 (3-57)||(26687766-26687820)
chr2 (19-57)||(27058407-27058445)
chr2 (1-55)||(36550844-36550898)
chr2 (1-55)||(44722940-44722994)
chr2 (4-57)||(9004384-9004437)
chr2 (2-54)||(29998633-29998685)
chr2 (5-57)||(8763640-8763692)
chr2 (1-35)||(35697483-35697517)
chr2 (3-57)||(40018808-40018862)
chr2 (20-57)||(22192198-22192235)
chr2 (1-57)||(18609520-18609576)
chr2 (5-53)||(38362348-38362396)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-59)||(22219-22277)
[»] chr8 (59 HSPs)
chr8 (1-59)||(5670242-5670300)
chr8 (1-59)||(11938751-11938809)
chr8 (1-59)||(24636658-24636716)
chr8 (1-58)||(19256219-19256276)
chr8 (1-57)||(3823141-3823197)
chr8 (2-53)||(33413044-33413095)
chr8 (1-59)||(30467027-30467085)
chr8 (3-57)||(43431634-43431688)
chr8 (1-57)||(8555377-8555433)
chr8 (1-57)||(17103938-17103994)
chr8 (1-57)||(17824689-17824745)
chr8 (1-57)||(19240875-19240931)
chr8 (1-57)||(19314059-19314115)
chr8 (1-57)||(21350486-21350542)
chr8 (1-53)||(25273400-25273452)
chr8 (1-53)||(26399080-26399132)
chr8 (1-57)||(30687944-30688000)
chr8 (1-53)||(32247921-32247973)
chr8 (1-57)||(40289494-40289549)
chr8 (1-59)||(25000504-25000562)
chr8 (4-57)||(6817062-6817115)
chr8 (1-57)||(4330986-4331042)
chr8 (1-57)||(4647828-4647884)
chr8 (5-57)||(5879212-5879264)
chr8 (1-53)||(8824837-8824889)
chr8 (1-53)||(23752359-23752411)
chr8 (1-53)||(31399581-31399633)
chr8 (1-57)||(32961667-32961723)
chr8 (1-57)||(37992107-37992163)
chr8 (1-55)||(17810308-17810362)
chr8 (1-55)||(18010133-18010187)
chr8 (1-55)||(22939323-22939377)
chr8 (1-55)||(27869248-27869302)
chr8 (3-57)||(29345079-29345133)
chr8 (1-55)||(29350933-29350987)
chr8 (1-53)||(19493728-19493781)
chr8 (3-55)||(6816458-6816510)
chr8 (1-57)||(9915113-9915169)
chr8 (1-53)||(13061004-13061056)
chr8 (1-57)||(24193269-24193325)
chr8 (4-55)||(27910840-27910891)
chr8 (4-55)||(27957259-27957310)
chr8 (1-55)||(24576097-24576151)
chr8 (1-55)||(33652577-33652631)
chr8 (1-50)||(25655931-25655980)
chr8 (1-57)||(15251610-15251666)
chr8 (1-53)||(19488134-19488186)
chr8 (3-53)||(10917839-10917889)
chr8 (1-54)||(31344245-31344298)
chr8 (1-49)||(16062012-16062060)
chr8 (1-45)||(21219313-21219357)
chr8 (10-54)||(25651089-25651133)
chr8 (1-32)||(8789873-8789904)
chr8 (4-55)||(24479874-24479925)
chr8 (5-58)||(6084321-6084374)
chr8 (1-57)||(9631411-9631468)
chr8 (4-57)||(17003270-17003323)
chr8 (5-57)||(3692248-3692300)
chr8 (1-57)||(18844617-18844673)
[»] chr4 (55 HSPs)
chr4 (1-59)||(13028889-13028947)
chr4 (1-57)||(19839187-19839243)
chr4 (1-57)||(32175810-32175866)
chr4 (1-57)||(55309286-55309342)
chr4 (5-59)||(4586835-4586889)
chr4 (1-59)||(25026563-25026621)
chr4 (1-59)||(45091280-45091338)
chr4 (1-57)||(5473857-5473913)
chr4 (1-53)||(14944758-14944810)
chr4 (1-57)||(19680497-19680553)
chr4 (1-57)||(37761915-37761971)
chr4 (1-57)||(45532652-45532708)
chr4 (1-53)||(9670552-9670604)
chr4 (5-57)||(13564992-13565044)
chr4 (1-57)||(18051847-18051903)
chr4 (1-57)||(22128385-22128441)
chr4 (1-57)||(25147729-25147785)
chr4 (1-57)||(27040098-27040154)
chr4 (1-53)||(29625337-29625389)
chr4 (1-53)||(30507999-30508051)
chr4 (1-57)||(36689685-36689741)
chr4 (5-53)||(38619859-38619907)
chr4 (1-53)||(38645762-38645814)
chr4 (1-57)||(46286302-46286358)
chr4 (4-59)||(18714908-18714963)
chr4 (1-55)||(2275751-2275805)
chr4 (3-57)||(5399617-5399671)
chr4 (1-55)||(12071972-12072026)
chr4 (1-55)||(22156674-22156728)
chr4 (1-59)||(54539292-54539350)
chr4 (1-57)||(8878891-8878947)
chr4 (5-57)||(18744147-18744199)
chr4 (1-57)||(30269061-30269117)
chr4 (1-57)||(30283072-30283128)
chr4 (1-57)||(33914067-33914123)
chr4 (1-57)||(37378696-37378752)
chr4 (1-57)||(38223518-38223574)
chr4 (5-59)||(4627155-4627209)
chr4 (1-50)||(9238698-9238747)
chr4 (1-54)||(9913269-9913322)
chr4 (1-57)||(1638455-1638511)
chr4 (5-53)||(7112023-7112071)
chr4 (1-53)||(9239354-9239406)
chr4 (5-57)||(30568076-30568128)
chr4 (2-53)||(4606903-4606954)
chr4 (1-55)||(22168278-22168332)
chr4 (1-50)||(9059025-9059074)
chr4 (6-53)||(12105995-12106042)
chr4 (1-47)||(24682400-24682446)
chr4 (4-57)||(29238431-29238484)
chr4 (1-57)||(16915377-16915433)
chr4 (1-53)||(42055409-42055461)
chr4 (1-54)||(3613006-3613059)
chr4 (4-57)||(34557191-34557244)
chr4 (1-53)||(6553816-6553868)
[»] chr3 (84 HSPs)
chr3 (1-59)||(29236048-29236106)
chr3 (1-59)||(48404864-48404922)
chr3 (1-57)||(11007756-11007812)
chr3 (1-57)||(11915764-11915820)
chr3 (1-57)||(13921331-13921387)
chr3 (1-57)||(27449094-27449150)
chr3 (1-59)||(21816725-21816783)
chr3 (1-57)||(1311032-1311088)
chr3 (1-57)||(5260943-5260999)
chr3 (1-53)||(13905111-13905163)
chr3 (1-57)||(19269937-19269993)
chr3 (1-57)||(19545516-19545572)
chr3 (1-53)||(23773487-23773539)
chr3 (8-59)||(35579605-35579656)
chr3 (1-55)||(18091620-18091674)
chr3 (3-57)||(28859597-28859651)
chr3 (1-53)||(1745560-1745612)
chr3 (1-53)||(3461383-3461435)
chr3 (1-57)||(4393423-4393479)
chr3 (1-57)||(9652584-9652640)
chr3 (1-57)||(17582374-17582430)
chr3 (1-57)||(18539810-18539866)
chr3 (5-57)||(19223455-19223507)
chr3 (1-57)||(19610344-19610400)
chr3 (1-57)||(28389979-28390035)
chr3 (1-57)||(49915457-49915513)
chr3 (3-57)||(29451100-29451154)
chr3 (4-57)||(23217284-23217337)
chr3 (1-57)||(7623604-7623660)
chr3 (5-57)||(8110345-8110397)
chr3 (1-57)||(8543475-8543531)
chr3 (1-57)||(10803726-10803782)
chr3 (1-57)||(11085415-11085471)
chr3 (1-57)||(11219144-11219200)
chr3 (1-57)||(16299867-16299923)
chr3 (1-57)||(18104603-18104659)
chr3 (1-53)||(21490107-21490159)
chr3 (1-53)||(26098823-26098875)
chr3 (1-57)||(26830515-26830571)
chr3 (1-57)||(29215998-29216054)
chr3 (1-57)||(30219344-30219400)
chr3 (3-54)||(21020074-21020125)
chr3 (5-55)||(25882578-25882628)
chr3 (1-50)||(6718723-6718772)
chr3 (1-54)||(46942496-46942549)
chr3 (5-57)||(1628221-1628273)
chr3 (1-53)||(5565732-5565784)
chr3 (1-53)||(5744426-5744478)
chr3 (1-53)||(5781385-5781437)
chr3 (1-53)||(15064065-15064117)
chr3 (5-57)||(18380030-18380082)
chr3 (5-57)||(26963326-26963378)
chr3 (1-57)||(27212854-27212910)
chr3 (1-57)||(27968921-27968977)
chr3 (1-57)||(29704105-29704161)
chr3 (1-57)||(29956378-29956434)
chr3 (1-57)||(30005533-30005589)
chr3 (1-57)||(31250094-31250150)
chr3 (1-57)||(36543755-36543811)
chr3 (5-53)||(43329840-43329888)
chr3 (1-53)||(50665709-50665761)
chr3 (4-55)||(17762650-17762701)
chr3 (4-55)||(19063970-19064021)
chr3 (5-55)||(8428179-8428229)
chr3 (1-43)||(8546265-8546307)
chr3 (1-55)||(10941738-10941792)
chr3 (1-59)||(47263338-47263396)
chr3 (4-53)||(6088304-6088353)
chr3 (1-57)||(10772127-10772183)
chr3 (5-53)||(11837291-11837339)
chr3 (1-53)||(17269677-17269729)
chr3 (1-57)||(21088758-21088814)
chr3 (1-53)||(23233236-23233288)
chr3 (1-53)||(46012801-46012853)
chr3 (4-55)||(26390710-26390761)
chr3 (5-47)||(31433753-31433795)
chr3 (4-57)||(20088406-20088459)
chr3 (1-57)||(15490041-15490096)
chr3 (1-57)||(36564512-36564568)
chr3 (5-59)||(15501629-15501683)
chr3 (5-35)||(37283551-37283581)
chr3 (8-57)||(27182736-27182785)
chr3 (5-57)||(20615420-20615472)
chr3 (1-29)||(27711241-27711269)
[»] chr1 (70 HSPs)
chr1 (1-59)||(4340415-4340473)
chr1 (1-59)||(41120810-41120868)
chr1 (1-57)||(41071908-41071964)
chr1 (1-59)||(46786031-46786089)
chr1 (1-57)||(22603558-22603614)
chr1 (1-57)||(29549428-29549484)
chr1 (1-57)||(9464113-9464169)
chr1 (1-57)||(12161824-12161880)
chr1 (1-57)||(15243095-15243151)
chr1 (1-57)||(22158812-22158868)
chr1 (1-57)||(23457907-23457963)
chr1 (1-53)||(28229528-28229580)
chr1 (1-57)||(50845403-50845459)
chr1 (1-57)||(52183688-52183744)
chr1 (1-55)||(6459229-6459283)
chr1 (1-55)||(9110048-9110102)
chr1 (1-59)||(9177108-9177166)
chr1 (1-55)||(12720821-12720875)
chr1 (1-55)||(41752445-41752499)
chr1 (1-55)||(45839304-45839358)
chr1 (1-54)||(13523034-13523087)
chr1 (1-57)||(9259256-9259312)
chr1 (1-57)||(12370014-12370070)
chr1 (1-57)||(13102326-13102382)
chr1 (1-57)||(14760877-14760933)
chr1 (1-57)||(18894973-18895029)
chr1 (1-53)||(19865258-19865310)
chr1 (1-57)||(20408233-20408289)
chr1 (1-57)||(32046886-32046942)
chr1 (1-57)||(41063207-41063263)
chr1 (1-53)||(46790014-46790066)
chr1 (1-55)||(6412126-6412180)
chr1 (1-55)||(12174839-12174893)
chr1 (4-57)||(7181631-7181684)
chr1 (1-53)||(41359001-41359054)
chr1 (4-57)||(50092374-50092427)
chr1 (1-57)||(7830041-7830097)
chr1 (5-53)||(8941071-8941119)
chr1 (5-57)||(9985404-9985456)
chr1 (1-57)||(14486705-14486761)
chr1 (1-57)||(17661060-17661116)
chr1 (1-57)||(18890622-18890678)
chr1 (1-57)||(38531243-38531299)
chr1 (2-57)||(13195593-13195648)
chr1 (1-55)||(46339518-46339572)
chr1 (1-54)||(11917799-11917852)
chr1 (5-54)||(19081741-19081790)
chr1 (5-54)||(19129629-19129678)
chr1 (5-54)||(26825253-26825302)
chr1 (1-53)||(9882110-9882162)
chr1 (1-57)||(22789664-22789720)
chr1 (1-57)||(51973434-51973490)
chr1 (3-57)||(16258561-16258615)
chr1 (1-35)||(25788070-25788104)
chr1 (1-54)||(20580922-20580975)
chr1 (1-53)||(13308893-13308945)
chr1 (5-57)||(16913654-16913706)
chr1 (1-57)||(17200083-17200139)
chr1 (5-57)||(20290397-20290449)
chr1 (1-57)||(29093627-29093683)
chr1 (5-57)||(30673504-30673556)
chr1 (1-57)||(39748943-39748999)
chr1 (2-57)||(46865253-46865308)
chr1 (1-52)||(48522533-48522584)
chr1 (3-57)||(25687355-25687409)
chr1 (5-53)||(12806914-12806963)
chr1 (3-52)||(45918979-45919028)
chr1 (2-58)||(6091330-6091386)
chr1 (1-57)||(12989862-12989918)
chr1 (5-57)||(17734031-17734083)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-58)||(15063-15120)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-57)||(7515-7571)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-57)||(3752-3808)
scaffold0007 (1-57)||(202784-202840)
scaffold0007 (1-57)||(276207-276263)
[»] chr7 (59 HSPs)
chr7 (1-57)||(10050909-10050965)
chr7 (1-57)||(31425584-31425640)
chr7 (1-55)||(21917407-21917461)
chr7 (2-59)||(21623029-21623086)
chr7 (1-57)||(1842904-1842960)
chr7 (1-53)||(3904551-3904603)
chr7 (1-57)||(45664778-45664834)
chr7 (1-49)||(2650901-2650949)
chr7 (1-57)||(6849284-6849340)
chr7 (5-57)||(9698615-9698667)
chr7 (1-57)||(11036517-11036573)
chr7 (1-57)||(18217839-18217895)
chr7 (1-57)||(20174030-20174086)
chr7 (1-57)||(22486404-22486460)
chr7 (1-57)||(23577262-23577318)
chr7 (5-57)||(23750813-23750865)
chr7 (1-57)||(24605848-24605904)
chr7 (1-57)||(36636516-36636572)
chr7 (1-57)||(40847508-40847564)
chr7 (1-55)||(15014478-15014532)
chr7 (1-55)||(28800890-28800944)
chr7 (1-55)||(47523723-47523777)
chr7 (4-53)||(3872263-3872312)
chr7 (1-57)||(816264-816320)
chr7 (5-57)||(20429475-20429527)
chr7 (1-57)||(32267357-32267413)
chr7 (5-57)||(37135362-37135414)
chr7 (1-57)||(39979697-39979753)
chr7 (2-57)||(22501604-22501659)
chr7 (1-55)||(23232051-23232105)
chr7 (5-55)||(27806030-27806080)
chr7 (1-55)||(42926493-42926547)
chr7 (4-57)||(20924034-20924087)
chr7 (1-54)||(31042264-31042317)
chr7 (1-57)||(687887-687943)
chr7 (1-57)||(1907365-1907421)
chr7 (5-53)||(2093439-2093487)
chr7 (1-57)||(2457680-2457736)
chr7 (1-53)||(26577279-26577331)
chr7 (1-57)||(38057642-38057698)
chr7 (1-55)||(7733385-7733439)
chr7 (5-55)||(15969796-15969846)
chr7 (1-51)||(23539248-23539298)
chr7 (1-53)||(1824273-1824325)
chr7 (1-53)||(4514779-4514831)
chr7 (1-57)||(10222702-10222758)
chr7 (1-57)||(14786708-14786764)
chr7 (1-57)||(23699898-23699954)
chr7 (5-57)||(24140460-24140512)
chr7 (5-53)||(33427704-33427752)
chr7 (1-57)||(48933146-48933202)
chr7 (1-57)||(21871582-21871634)
chr7 (4-54)||(11852021-11852071)
chr7 (5-54)||(26415437-26415486)
chr7 (5-57)||(25777189-25777241)
chr7 (2-42)||(27304895-27304935)
chr7 (5-57)||(36993830-36993882)
chr7 (1-57)||(27130344-27130398)
chr7 (8-40)||(5235420-5235452)
[»] chr6 (65 HSPs)
chr6 (1-57)||(25398012-25398068)
chr6 (1-57)||(28364921-28364977)
chr6 (1-59)||(15448393-15448451)
chr6 (1-57)||(495700-495756)
chr6 (1-57)||(9892973-9893029)
chr6 (1-57)||(15364531-15364587)
chr6 (1-57)||(21990247-21990303)
chr6 (5-53)||(5192266-5192314)
chr6 (1-53)||(12499230-12499282)
chr6 (1-53)||(12506559-12506611)
chr6 (1-53)||(12509619-12509671)
chr6 (1-57)||(20182155-20182211)
chr6 (1-53)||(20692884-20692936)
chr6 (1-57)||(21140949-21141005)
chr6 (1-57)||(22153780-22153836)
chr6 (1-57)||(22579422-22579478)
chr6 (1-57)||(23281796-23281852)
chr6 (1-57)||(27705432-27705488)
chr6 (1-55)||(2992627-2992681)
chr6 (1-55)||(6598476-6598530)
chr6 (1-55)||(26939599-26939653)
chr6 (1-57)||(343636-343692)
chr6 (1-57)||(2669319-2669375)
chr6 (1-57)||(12845013-12845069)
chr6 (1-57)||(12951718-12951774)
chr6 (5-57)||(14886571-14886623)
chr6 (1-53)||(15961480-15961532)
chr6 (1-57)||(18033598-18033654)
chr6 (1-53)||(19175850-19175902)
chr6 (1-57)||(22083848-22083904)
chr6 (3-55)||(27796909-27796961)
chr6 (1-57)||(30834033-30834089)
chr6 (1-48)||(5360428-5360475)
chr6 (4-55)||(26224440-26224491)
chr6 (1-55)||(11049824-11049878)
chr6 (5-55)||(12160923-12160973)
chr6 (4-53)||(14872133-14872182)
chr6 (1-53)||(11077663-11077715)
chr6 (1-53)||(11350196-11350248)
chr6 (5-57)||(11530235-11530287)
chr6 (1-53)||(13145016-13145068)
chr6 (1-57)||(14036630-14036686)
chr6 (1-57)||(16250875-16250931)
chr6 (1-49)||(17919554-17919602)
chr6 (1-57)||(18492379-18492435)
chr6 (1-55)||(24661082-24661136)
chr6 (1-55)||(33250781-33250835)
chr6 (1-54)||(21691569-21691622)
chr6 (1-53)||(6605569-6605621)
chr6 (1-57)||(12351659-12351715)
chr6 (5-57)||(12680261-12680313)
chr6 (1-53)||(28668114-28668166)
chr6 (5-48)||(12205262-12205305)
chr6 (1-51)||(1939315-1939365)
chr6 (3-57)||(9885253-9885307)
chr6 (5-55)||(12200706-12200756)
chr6 (5-54)||(5270405-5270454)
chr6 (5-57)||(3673210-3673262)
chr6 (1-57)||(18048798-18048854)
chr6 (1-53)||(33547560-33547612)
chr6 (1-44)||(6978300-6978343)
chr6 (3-57)||(11431715-11431769)
chr6 (5-35)||(15509188-15509218)
chr6 (5-57)||(13668071-13668123)
chr6 (1-57)||(16118156-16118212)
[»] chr5 (51 HSPs)
chr5 (1-57)||(23408990-23409046)
chr5 (1-59)||(24138914-24138972)
chr5 (1-59)||(26708658-26708716)
chr5 (1-59)||(26978392-26978450)
chr5 (1-57)||(8886924-8886980)
chr5 (1-53)||(10494751-10494803)
chr5 (1-53)||(40484058-40484110)
chr5 (1-53)||(746941-746993)
chr5 (1-57)||(5982655-5982711)
chr5 (5-57)||(7888807-7888859)
chr5 (5-57)||(12045737-12045789)
chr5 (1-57)||(17039704-17039760)
chr5 (1-57)||(23975645-23975701)
chr5 (1-57)||(25652656-25652712)
chr5 (1-57)||(27428085-27428141)
chr5 (1-57)||(28265548-28265604)
chr5 (1-57)||(33818634-33818690)
chr5 (1-53)||(38837744-38837796)
chr5 (1-55)||(618306-618360)
chr5 (3-57)||(23423831-23423885)
chr5 (4-53)||(16631950-16631999)
chr5 (4-57)||(36831966-36832019)
chr5 (1-57)||(15060983-15061039)
chr5 (1-53)||(17772041-17772093)
chr5 (1-53)||(25397861-25397913)
chr5 (1-57)||(36196404-36196460)
chr5 (4-55)||(16121915-16121966)
chr5 (1-56)||(17036485-17036540)
chr5 (1-55)||(2472787-2472841)
chr5 (1-55)||(12328299-12328353)
chr5 (1-55)||(35620416-35620470)
chr5 (1-54)||(11927859-11927912)
chr5 (1-53)||(4125261-4125313)
chr5 (1-57)||(8108933-8108989)
chr5 (1-57)||(13620200-13620256)
chr5 (1-57)||(17079415-17079471)
chr5 (5-57)||(20959518-20959570)
chr5 (1-57)||(33816831-33816887)
chr5 (6-57)||(13974156-13974207)
chr5 (1-55)||(17986741-17986795)
chr5 (1-57)||(7003803-7003857)
chr5 (1-57)||(20188014-20188070)
chr5 (5-57)||(22649406-22649458)
chr5 (1-57)||(25673301-25673357)
chr5 (1-57)||(32726799-32726855)
chr5 (5-53)||(36597417-36597465)
chr5 (1-54)||(10420325-10420378)
chr5 (5-57)||(36716277-36716329)
chr5 (10-57)||(29727928-29727975)
chr5 (1-48)||(31853161-31853208)
chr5 (4-57)||(3080772-3080825)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-59)||(10736-10794)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-55)||(26495-26549)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-57)||(6052-6108)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-57)||(9302-9358)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-57)||(74614-74670)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-57)||(58592-58648)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-53)||(84747-84799)
scaffold0006 (1-54)||(121060-121113)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-53)||(439977-440029)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-55)||(992-1046)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-55)||(19615-19669)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-55)||(173456-173510)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-55)||(8183-8237)
scaffold0001 (1-55)||(21915-21969)
scaffold0001 (4-57)||(84313-84366)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-57)||(7466-7522)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-57)||(37860-37916)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-57)||(10168-10224)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-53)||(182544-182596)
scaffold0009 (1-55)||(219648-219702)
scaffold0009 (16-53)||(215744-215781)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-57)||(12663-12718)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-57)||(43927-43983)
[»] scaffold0161 (1 HSPs)
scaffold0161 (3-57)||(6805-6859)
[»] scaffold0023 (1 HSPs)
scaffold0023 (3-49)||(39778-39824)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-48)||(3235-3282)
[»] scaffold0024 (1 HSPs)
scaffold0024 (3-57)||(112338-112392)
[»] scaffold0035 (1 HSPs)
scaffold0035 (5-55)||(74794-74845)
[»] scaffold0502 (1 HSPs)
scaffold0502 (4-57)||(10902-10955)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 74 - 282
Target Start/End: Original strand, 39362013 - 39362221
Alignment:
Q  74 tgaaccgcagccaccaacacaaacatttgcgccatcttgaagaacccatctccgtataagattatctctagttgtgtaagcgaataagttatttgcaaaa 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  39362013 tgaaccacagccaccaacacaaacatttgcgccatcttgaagaacccatctccgcacaagattatctctggttgtgtaagcgaataagttatttgcaaaa 39362112  T
Q  174 tattaaaaatgttaaaataagacggataaatccatcgatcaaataatttattttgtttctatcaatttttgataaataacttgattgaggcagctaaaaa 273  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  39362113 tattaaaaatgttaacataagacggataaatccatcgatcaaataatttattttgtttctattaatttttgataaataacttgattgaggcagctacaaa 39362212  T
Q  274 tattcttcg 282  Q
    |||| ||||    
T  39362213 tattattcg 39362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13613166 - 13613219
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13613166 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 13613219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32009014 - 32008958
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32009014 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcattaaattt 32008958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43408584 - 43408636
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43408584 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 43408636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12779662 - 12779604
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  12779662 tcgcaaaatttagtgacgaaattagagaggaattttacgttttccctcactaaatttag 12779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18551326 - 18551380
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18551326 tcgcaaaatttagtgacggaattagagagggattttatgttttccctcactaaat 18551380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23858030 - 23858088
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  23858030 tcgcaaaatttagtgacggaattagagaatgattttacgttttccctcactaaatttag 23858088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37552289 - 37552231
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37552289 tcgcaaaatttaatgacggaattagagagggattttacattttccctcactaaatttag 37552231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13788128 - 13788184
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  13788128 tcgcaaaatttagtgacgaaattagagagggattttacattttccctcactaaattt 13788184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23388451 - 23388507
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23388451 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 23388507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28319652 - 28319708
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  28319652 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 28319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30783400 - 30783344
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  30783400 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 30783344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32300513 - 32300457
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32300513 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 32300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41637680 - 41637624
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  41637680 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 41637624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41736234 - 41736178
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  41736234 tcgcaaaatttagtgacgaaattagagagggattttacattttccctcactaaattt 41736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27523073 - 27523019
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  27523073 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 27523019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 28262423 - 28262370
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  28262423 caaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 28262370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1141598 - 1141542
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  1141598 tcgcaaaatttagtgacagaattagagagggatttcacgttttccctcacaaaattt 1141542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7093630 - 7093578
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  7093630 tcgcaaaatttagtgacaaaattagagagggattttacgttttccctcactaa 7093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8430354 - 8430302
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8430354 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 8430302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15636808 - 15636864
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  15636808 tcgcaaaatttagtgacgaaattagagagggatttcacgttttccctcacaaaattt 15636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29749476 - 29749532
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  29749476 tcgcaaaatttagtgacggaattagggagggatttcatgttttccctcactaaattt 29749532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31266416 - 31266360
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  31266416 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcgctaaattt 31266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32185890 - 32185838
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32185890 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 32185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37724065 - 37724121
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  37724065 tcgcaaaatttagtgacggtattagcgagggatttcacgttttccctcactaaattt 37724121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37802451 - 37802507
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  37802451 tcgcaaaatttagtgacggaattagagactgattttacgttttccctctctaaattt 37802507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44476448 - 44476500
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  44476448 tcgcaaaatttagtgacggaattagagagagattttacgttttccttcactaa 44476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27327677 - 27327622
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  27327677 cgcaaaatttagtgacggaattaaagagggatttcatgttttccctcactaaattt 27327622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14757194 - 14757248
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  14757194 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaaat 14757248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28841415 - 28841469
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  28841415 tcgcaaaatttagtgacggaattagagagggatttcatgttttcccacactaaat 28841469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18916473 - 18916529
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||    
T  18916473 tcgcaaaatttagtgactgaattagagagggatttcatgttttccctccctaaattt 18916529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20065147 - 20065203
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||    
T  20065147 tcgcaaaatttagtgactgaattagagagggatttcacgtttttcctcacaaaattt 20065203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 21293788 - 21293840
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  21293788 aaaatttagtgacggaattagagagagatttcacgttttccctcacaaaattt 21293840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22140437 - 22140493
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||    
T  22140437 tcgcaaaatttagtgacggaattagagagggatttcacgttttctttcacaaaattt 22140493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 26243398 - 26243446
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  26243398 aaaatttagtgacggaattagagaggaattttacgtttttcctcactaa 26243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 26687766 - 26687820
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||| | ||||||| |||||||||||    
T  26687766 gcaaaatttagtgacggaattagagatggatttcatgttttccgtcactaaattt 26687820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 27058407 - 27058445
Alignment:
Q  19 gaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27058407 gaattagagagggattttacgttttccctcactaaattt 27058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36550898 - 36550844
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||    
T  36550898 tcgcaaaatttagtgatggaattatagagggatttcatgttttccctcactaaat 36550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44722994 - 44722940
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||    
T  44722994 tcgcaaaatttagtgacggaattagagagggatttcatattttctctcactaaat 44722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 9004384 - 9004437
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||    
T  9004384 caaaatttagtgatggaattagagagaaattttacattttccctcactaaattt 9004437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 29998633 - 29998685
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| || |||||    
T  29998633 cgcaaaatttagtgacggaattagagaaggatttcacgttttccttctctaaa 29998685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8763692 - 8763640
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||| |||||| | ||||||| |||||||||||    
T  8763692 aaaatttaatgacggaattagagatggatttcatgttttccttcactaaattt 8763640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35697517 - 35697483
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattt 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  35697517 tcgcaaaatttagtgacggaattagagaggaattt 35697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 40018862 - 40018808
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| |||||  ||||||||||| ||||| | |||||||||||||||||||    
T  40018862 gcaaaattcagtgagagaattagagagagatttcatgttttccctcactaaattt 40018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 22192235 - 22192198
Alignment:
Q  20 aattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| | |||||||||||||||||||    
T  22192235 aattagagagggatttcatgttttccctcactaaattt 22192198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18609576 - 18609520
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| || | | ||||||||||| |||| | |||||||||||||||||||    
T  18609576 tcgcaaaattttgtcatgaaattagagaggtatttcatgttttccctcactaaattt 18609520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 38362348 - 38362396
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||| |||||| |||||||| | ||||||||||||||||||| ||||    
T  38362348 aaaattaagtgacagaattagaaaaggattttacgttttccctcgctaa 38362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22277 - 22219
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22277 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 22219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5670242 - 5670300
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5670242 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 5670300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11938809 - 11938751
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11938809 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 11938751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24636716 - 24636658
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24636716 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 24636658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19256276 - 19256219
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19256276 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 19256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3823197 - 3823141
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3823197 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 3823141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 33413044 - 33413095
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33413044 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 33413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30467027 - 30467085
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  30467027 tcgcaaaatttagtgatggaattagagagagattttacgttttccctcactaaatttag 30467085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 43431634 - 43431688
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43431634 gcaaaatttagtgacgaaattagagagggattttacgttttccctcactaaattt 43431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8555377 - 8555433
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  8555377 tcgcaaaatttagtgacggaattagagagagattttatgttttccctcactaaattt 8555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17103938 - 17103994
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  17103938 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 17103994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17824689 - 17824745
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  17824689 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 17824745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19240931 - 19240875
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19240931 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcacaaaattt 19240875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19314115 - 19314059
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19314115 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcacaaaattt 19314059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21350542 - 21350486
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  21350542 tcgcaaaatttagtgacggaattagagatggattttacgtttttcctcactaaattt 21350486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25273400 - 25273452
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25273400 tcgcaaaatttagtgacagaattagagagggattttacgttttccctcactaa 25273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26399080 - 26399132
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26399080 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 26399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30688000 - 30687944
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  30688000 tcgcaaaatttagtgacggaattagagagggattttacattttccttcactaaattt 30687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32247973 - 32247921
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32247973 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 32247921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40289494 - 40289549
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40289494 tcgcaaaatttagtgacggaattag-gagggattttacgttttccctcactaaattt 40289549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25000504 - 25000562
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  25000504 tcgcagaattttgtgacggaattagagagggatgttacgttttccctcactaaatttag 25000562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6817115 - 6817062
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  6817115 caaaatttagtgacggaattagagagagattttacattttccctcactaaattt 6817062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4331042 - 4330986
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  4331042 tcgcaaaatttagtgacggaattagagaggaatttcacgttttccctcacaaaattt 4330986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4647828 - 4647884
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  4647828 tcgcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaattt 4647884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 5879264 - 5879212
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  5879264 aaaatttagtgacggaattagagaggcattttacgtttttcctcactaaattt 5879212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8824889 - 8824837
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  8824889 tcgcaaaatttagtgacggaattagagagggattttacatttttcctcactaa 8824837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23752359 - 23752411
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  23752359 tcgcaaaatttagtgacggaattagagagtgattttacattttccctcactaa 23752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31399581 - 31399633
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  31399581 tcgcaaaatttagtgacggaattagagatggatttcacgttttccctcactaa 31399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32961723 - 32961667
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  32961723 tcgcaaagtttagtgacggaattagagaggaattttacattttccctcactaaattt 32961667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37992163 - 37992107
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  37992163 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaaattt 37992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17810362 - 17810308
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  17810362 tcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcactaaat 17810308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18010133 - 18010187
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  18010133 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcaataaat 18010187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22939377 - 22939323
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  22939377 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaaat 22939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27869302 - 27869248
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  27869302 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaaat 27869248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 29345133 - 29345079
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  29345133 gcaaaatttagtgacggaattagggagggatttcacgttttccctctctaaattt 29345079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29350987 - 29350933
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  29350987 tcgcaaaatttagtgacgcaattagagagggatttcatgttttccctcactaaat 29350933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19493728 - 19493781
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagaggga-ttttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  19493728 tcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaa 19493781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 6816458 - 6816510
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  6816458 gcaaaatttagtggcggaattagagagggatttcatgttttccctcactaaat 6816510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9915113 - 9915169
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||||    
T  9915113 tcgcaaaatttagtgacaggattagagagggatttcacgttttccctcacaaaattt 9915169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13061004 - 13061056
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  13061004 tcgcaaaatttagtgacagaattagagagggatttcatgttttccctcactaa 13061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24193269 - 24193325
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||    
T  24193269 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcacaaaattt 24193325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 27910840 - 27910891
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  27910840 caaaatttagtgacggaattagagagggatttcatgttttccctcagtaaat 27910891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 27957259 - 27957310
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  27957259 caaaatttagtgacggaattagagagggatttcatgttttccctcagtaaat 27957310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24576097 - 24576151
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||    
T  24576097 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcgctaaat 24576151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33652631 - 33652577
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||| ||||||| |||||| | |||||||||||||||||    
T  33652631 tcgcaaaatttagtgacggagttagagaaggatttcatgttttccctcactaaat 33652577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25655931 - 25655980
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcac 50  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  25655931 tcgcaaaatttagtgatagaattagagagggatttcacgttttccctcac 25655980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15251666 - 15251610
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||  |||||||    
T  15251666 tcgcaaaatttagtgacagaattagagaaggatttcacgttttccctctttaaattt 15251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19488134 - 19488186
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||| |||| |  ||||||||||||||    
T  19488134 tcgcaaaatttagtgacggaattagagaggaatttcatattttccctcactaa 19488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 10917889 - 10917839
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||  | ||||| |||||||||    
T  10917889 gcaaaatttagtgacggaattagagagggattgcatgtttttcctcactaa 10917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31344245 - 31344298
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||| ||||||||||||||||| |||| || ||||||||| |||||    
T  31344245 tcgcaaaatttaatgacggaattagagaggaatttcacattttccctctctaaa 31344298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16062012 - 16062060
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctca 49  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  16062012 tcgcaaaatgtagtgacggaattagagagtgatttcacgtttttcctca 16062060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21219313 - 21219357
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttcc 45  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||    
T  21219313 tcgcaaaatttagtgatggaattagagagggatttcacgtattcc 21219357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 25651133 - 25651089
Alignment:
Q  10 ttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||||| || |||||||||||| ||||||||    
T  25651133 ttagtgacggaattagagagagactttacgttttccttcactaaa 25651089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 8789904 - 8789873
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagaggga 32  Q
    ||||||||||||||||||||||||||||||||    
T  8789904 tcgcaaaatttagtgacggaattagagaggga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24479874 - 24479925
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||| |||||||||||| |||| ||||||||| || ||||||    
T  24479874 caaaatttagtgacagaattagagaggaatttcacgttttccttctctaaat 24479925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6084321 - 6084374
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 58  Q
    ||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  6084321 aaaatttagtgacggaattagagagagatttgacattttcagtctctaaattta 6084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9631468 - 9631411
Alignment:
Q  1 tcgcaaaatttagtgacgg-aattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||| ||||||||||  |||| ||||||||| |||| ||||||    
T  9631468 tcgcaaaatttagtgacgggaattagagagaaatttcacgttttccttcacaaaattt 9631411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 17003323 - 17003270
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||| |||| | |||||||||  ||||||||||||||||| ||||||||    
T  17003323 caaaatttaatgactgtattagagagcaattttacgttttccctctctaaattt 17003270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3692248 - 3692300
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||  |||||||    
T  3692248 aaaatttagtaatggaattagagaaggattttacgttttacctctataaattt 3692300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18844617 - 18844673
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| | ||  |||||||||||||||| | ||||||| |||||||||||    
T  18844617 tcgcaaaatttaataacaaaattagagagggatttcatgttttccttcactaaattt 18844673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13028889 - 13028947
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13028889 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 13028947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19839243 - 19839187
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19839243 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 19839187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32175810 - 32175866
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32175810 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 32175866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 55309286 - 55309342
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55309286 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 55309342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 4586835 - 4586889
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4586835 aaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 4586889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25026621 - 25026563
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25026621 tcgcaaaatttagtgacggaattagagagagattttacgttttccctcactaaatttag 25026563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45091338 - 45091280
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45091338 tcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttag 45091280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5473913 - 5473857
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5473913 tcgcaaaatttagtgacggaattaaagagggattttacgttttccctcactaaattt 5473857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14944810 - 14944758
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14944810 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 14944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19680497 - 19680553
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19680497 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcacaaaattt 19680553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37761915 - 37761971
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37761915 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattt 37761971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45532652 - 45532708
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45532652 tcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaaattt 45532708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9670552 - 9670604
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9670552 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaa 9670604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 13564992 - 13565044
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13564992 aaaatttagtgacggaattagagaggaattttacgttttccctcactaaattt 13565044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18051903 - 18051847
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18051903 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22128385 - 22128441
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  22128385 tcgcaaaatttagtgacagaattagagagggatttcacgttttccctcactaaattt 22128441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25147785 - 25147729
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25147785 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 25147729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27040098 - 27040154
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  27040098 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 27040154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29625389 - 29625337
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29625389 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 29625337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30508051 - 30507999
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30508051 tcgcaaaatttagtgacggaattagagagggattttacattttccctcactaa 30507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36689741 - 36689685
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  36689741 tcgcaaaatttagtgacggaattagagagggatttcacgttttcccacactaaattt 36689685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 38619907 - 38619859
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38619907 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 38619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38645814 - 38645762
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38645814 tcgcaaaatttagtgacggagttagagagggattttacgttttccctcactaa 38645762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46286302 - 46286358
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  46286302 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 46286358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 18714963 - 18714908
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  18714963 caaaatttagtgacggaattagagagggattttacgtttttccttactaaatttag 18714908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2275751 - 2275805
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2275751 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 2275805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5399671 - 5399617
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  5399671 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 5399617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12072026 - 12071972
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  12072026 tcgcaaaatttagtgacggaattagagagggattttatgttttccttcactaaat 12071972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22156674 - 22156728
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22156674 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 22156728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 54539350 - 54539292
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  54539350 tcgcaaaatttagtgacgcaattaaagagtgattttacgttttccctcactaaatttag 54539292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8878947 - 8878891
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  8878947 tcgcaaaatttagtgacagaattagagagggatttcatgttttccctcactaaattt 8878891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 18744147 - 18744199
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18744147 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18744199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30269061 - 30269117
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  30269061 tcgcaaaatttagtgacggaattagagagagattttacattttccctcgctaaattt 30269117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30283128 - 30283072
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  30283128 tcgcaaaatttagtgacggaattagagagagattttacattttccctcgctaaattt 30283072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33914123 - 33914067
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  33914123 tcgcaaaatttagtgacggaattagagagggatttcatgtttttcctcactaaattt 33914067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37378696 - 37378752
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  37378696 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaattt 37378752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38223574 - 38223518
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  38223574 tcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaattt 38223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 4627155 - 4627209
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  4627155 aaaatttagtgacgaaattagagagagattttacattttccctcactaaatttag 4627209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9238698 - 9238747
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcac 50  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9238698 tcgcaaaatttagtgacggaattagagagaaattttacgttttccctcac 9238747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9913322 - 9913269
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  9913322 tcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 9913269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1638511 - 1638455
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||    
T  1638511 tcgcaaaatttagtgacggaattagggaggaatttcatgttttccctcactaaattt 1638455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7112023 - 7112071
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  7112023 aaaatttagtgacggaattatagagggattttacattttccctcactaa 7112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9239354 - 9239406
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  9239354 tcgcaaaattgaatgacggaattagagagggatttcacgttttccctcactaa 9239406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30568076 - 30568128
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  30568076 aaaatttaatgacggaattagagagagattttacgttttccctcacaaaattt 30568128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 4606903 - 4606954
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  4606903 cgcaaaatttagtgacggaattagagagtgatttcactttttccctcactaa 4606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22168332 - 22168278
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||| |||||||||||||| |||| | |||||||||||||||||    
T  22168332 tcgcaaaatttagtgccggaattagagaggaatttcatgttttccctcactaaat 22168278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9059025 - 9059074
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcac 50  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  9059025 tcgcaaaatttaatgacggaattagagagggatttcatgttttccctcac 9059074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 12106042 - 12105995
Alignment:
Q  6 aaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||    
T  12106042 aaatttagtgacggaattagagaggggtttcatgttttccctcactaa 12105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24682400 - 24682446
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccct 47  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||    
T  24682400 tcgcaaaatttagtggtggaattagagagggatttcacgttttccct 24682446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 29238484 - 29238431
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||| || ||||||| ||||| |||||||||||||    
T  29238484 caaaatttagtgacagaattagatagagattttatgtttttcctcactaaattt 29238431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16915433 - 16915377
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||  |||||||||| ||||| |  ||||||||||||||||||    
T  16915433 tcgcaaaatttagtgacaaaattagagagagatttcatattttccctcactaaattt 16915377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42055461 - 42055409
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||| |||||||||| ||| |||||||| |||| |||||||||    
T  42055461 tcgcaaaatttagtaacggaattagtgagtgattttacatttttcctcactaa 42055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3613059 - 3613006
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||| |||||||||| ||||||||||| |||| ||||||| |||| |||||    
T  3613059 tcgcaaattttagtgacgaaattagagaggaatttcacgtttttcctctctaaa 3613006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34557244 - 34557191
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||| ||||||||||| |||  |||||||| ||||||||| ||||||||    
T  34557244 caaaatttaatgacggaattaaagacagattttaccttttccctcgctaaattt 34557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6553868 - 6553816
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||| ||  |||||||||||||||| | ||| |||||||||||    
T  6553868 tcgcaaaatttagtaacataattagagagggatttcatgttatccctcactaa 6553816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29236106 - 29236048
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29236106 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 29236048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48404922 - 48404864
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48404922 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 48404864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11007756 - 11007812
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11007756 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 11007812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11915820 - 11915764
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11915820 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 11915764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13921387 - 13921331
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13921387 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27449150 - 27449094
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449150 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 27449094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21816783 - 21816725
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21816783 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttag 21816725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1311032 - 1311088
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1311032 tcgcaaaatttagtgacggaattagagagggattttacgttttccatcactaaattt 1311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5260999 - 5260943
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5260999 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatattt 5260943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13905111 - 13905163
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13905111 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 13905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19269937 - 19269993
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19269937 tcgcaaaatttagtgacggaattaaagagggattttacgttttccctcactaaattt 19269993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19545572 - 19545516
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19545572 tcgcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaattt 19545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23773539 - 23773487
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23773539 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 23773487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 35579605 - 35579656
Alignment:
Q  8 atttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35579605 atttagtgacggaattagagagggattttacgttttccctcactaaatttag 35579656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18091620 - 18091674
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18091620 tcgcaaaatttagtgacggaattagagagggattttatgttttccctcactaaat 18091674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 28859651 - 28859597
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28859651 gcaaaatttagtgacggaattagagagggattttacgttttacctcactaaattt 28859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1745560 - 1745612
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1745560 tcgcaaaatttagtgacggaattagagagagattttacgttttccctcactaa 1745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3461383 - 3461435
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3461383 tcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaa 3461435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4393423 - 4393479
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4393423 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 4393479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9652640 - 9652584
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9652640 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 9652584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17582374 - 17582430
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  17582374 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 17582430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18539866 - 18539810
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18539866 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18539810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 19223507 - 19223455
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19223507 aaaatttagtgacggaattagagagggattttacgttttcccccactaaattt 19223455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19610400 - 19610344
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  19610400 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 19610344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28390035 - 28389979
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28390035 tcgcaaaatttagtgacggaattagagaaggatttcacgttttccctcactaaattt 28389979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49915513 - 49915457
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  49915513 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 49915457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 29451154 - 29451100
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  29451154 gcaaaattttgggacggaattagagagggattttacgttttccctcactaaattt 29451100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 23217284 - 23217337
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  23217284 caaaatttagtgacggaattagagagggatttcacgttttccctctctaaattt 23217337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7623604 - 7623660
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  7623604 tcgcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaattt 7623660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8110397 - 8110345
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8110397 aaaatttaatgacggaattagagaggaattttacgttttccctcactaaattt 8110345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8543531 - 8543475
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  8543531 tcgcaaaatttaatgacggaattagagagggatttcacgttttccctcacaaaattt 8543475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10803782 - 10803726
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  10803782 tcgcaaaatttaatgacggaattaaagaggaattttacgttttccctcactaaattt 10803726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11085415 - 11085471
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  11085415 tcgcaaaatttagtgacggaattagagagggatttcacaatttccctcactaaattt 11085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11219200 - 11219144
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  11219200 tcgcaaaatttaatgacggaattagagagggatttcacgttttccctcacaaaattt 11219144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16299923 - 16299867
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  16299923 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcaccaaattt 16299867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18104603 - 18104659
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  18104603 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaattt 18104659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21490107 - 21490159
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  21490107 tcgcaaaatttagtgacagaattagagagggattttacattttccctcactaa 21490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26098875 - 26098823
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  26098875 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaa 26098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26830515 - 26830571
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  26830515 tcgcaaaattttgtgacggaattagagagggatttcacgttttccctctctaaattt 26830571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29216054 - 29215998
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  29216054 tcgcaaaatttagtgatggaattagagagggatttcatgttttccctcactaaattt 29215998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30219400 - 30219344
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  30219400 tcgcaaaatttagtgacggaattagagagggatttcatgtttttcctcactaaattt 30219344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21020125 - 21020074
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  21020125 gcaaaatttagtgacggaattagagaaggattttatgttttccctcactaaa 21020074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 25882628 - 25882578
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25882628 aaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 25882578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6718772 - 6718723
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcac 50  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6718772 tcgcaaaatttagtgacggaattagaaagggatttcacgttttccctcac 6718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46942549 - 46942496
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  46942549 tcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 46942496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1628273 - 1628221
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  1628273 aaaatttagtgacgaaattagagagggatttcacgttttccctctctaaattt 1628221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5565784 - 5565732
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  5565784 tcgcaaaatttagtgacataattagagagggatttcacgttttccctcactaa 5565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5744478 - 5744426
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  5744478 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaa 5744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5781437 - 5781385
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  5781437 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaa 5781385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15064065 - 15064117
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  15064065 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaa 15064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 18380082 - 18380030
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  18380082 aaaatttagtgacggaattaaagagggattttacattttccctcattaaattt 18380030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 26963326 - 26963378
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  26963326 aaaatttagtaacggaattagagaggaattttacattttccctcactaaattt 26963378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27212854 - 27212910
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||    
T  27212854 tcgcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaattt 27212910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27968977 - 27968921
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||||||    
T  27968977 tcgcaaaatttaatgacagaattagagagggatttcatgttttccctcactaaattt 27968921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29704105 - 29704161
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  29704105 tcgcaaaatttagtgacggaattaaagagggatttcacgttttctctcacaaaattt 29704161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29956434 - 29956378
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||    
T  29956434 tcgcaaaatttagtgacggaattagaaagggatttcacattttccctcacaaaattt 29956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30005589 - 30005533
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||    
T  30005589 tcgcaaaatttagtgacggaattagaaagggatttcacattttccctcacaaaattt 30005533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31250150 - 31250094
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||    
T  31250150 tcgcaaaatttagtgacagaattagagagggattttgtgttttccctctctaaattt 31250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36543811 - 36543755
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||    
T  36543811 tcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcacaaaattt 36543755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 43329840 - 43329888
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43329840 aaaatttagtgacggaattagagaaggattttacattttccctcactaa 43329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50665709 - 50665761
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  50665709 tcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcactaa 50665761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17762701 - 17762650
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  17762701 caaaatttagtgacggaattagagagcgatttcatgttttccctcactaaat 17762650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 19064021 - 19063970
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  19064021 caaaatttagtgacggaattagagagcgatttcatgttttccctcactaaat 19063970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 8428229 - 8428179
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  8428229 aaaatttagtgacggaattagagagagatttcatgttttccctcactaaat 8428179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8546307 - 8546265
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgtttt 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  8546307 tcgcaaaatttagtgacggaattagagagggatttcacgtttt 8546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10941738 - 10941792
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  10941738 tcgcaaaatttagtgatggaattagagagggatttcatgttttccctcattaaat 10941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47263338 - 47263396
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||||| || ||||| ||  ||||||||||||||||||||||||||||    
T  47263338 tcgcaaaatttagtgacagagttagatagaaattttacgttttccctcactaaatttag 47263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 6088304 - 6088353
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  6088304 caaaatttaataacggaattagagatggattttacgttttccctcactaa 6088353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10772127 - 10772183
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||||| |||||||||||||||| |  ||||||||||||||||||    
T  10772127 tcgcaaaatttaatgacgaaattagagagggatttcatattttccctcactaaattt 10772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11837291 - 11837339
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||    
T  11837291 aaaatttagtgacggaattagagaggaatttcatgttttccctcactaa 11837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17269677 - 17269729
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| |  |||| |||||||||    
T  17269677 tcgcaaaatttagtgacggaattagagagggatttcatatttttcctcactaa 17269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21088814 - 21088758
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||  |||||||||| ||||||||||| | |||||||||||||||||||    
T  21088814 tcgcaaaatttgatgacggaattcgagagggatttcatgttttccctcactaaattt 21088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23233236 - 23233288
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| |||||| |||||| |||| |||||||||||||||||    
T  23233236 tcgcaaaatttagtgaaggaatttgagaggaatttcacgttttccctcactaa 23233288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46012801 - 46012853
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||  |||||||||||||||| | |||||||||||||||    
T  46012801 tcgcaaaatttagtgacaaaattagagagggatttcatgttttccctcactaa 46012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26390710 - 26390761
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||| ||||    
T  26390710 caaaatttagtgacggaattagagagggatttcatgttatccctcacaaaat 26390761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 31433795 - 31433753
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccct 47  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  31433795 aaaatttagtgacggaattagagaggaatttcacgttttccct 31433753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 20088459 - 20088406
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||| ||||||||||| |||||| | ||||| |||||||||||||    
T  20088459 caaaatttagtgatggaattagagaaggatttcatgttttgcctcactaaattt 20088406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15490096 - 15490041
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||  ||||| |||||||||| |||||||| ||||||||||||    
T  15490096 tcgcaaaatttagtgaca-aattaaagagggatttcacgttttctctcactaaattt 15490041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36564512 - 36564568
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||| |||||||||||| |||||||||||||||| | | |||||||||| ||||||    
T  36564512 tcgcagaatttagtgacgaaattagagagggatttcatgctttccctcacaaaattt 36564568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 15501629 - 15501683
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||| |||||||||||||| | ||||||| ||||||| || |||||||||    
T  15501629 aaaatttagggacggaattagagatgaattttacattttcccacattaaatttag 15501683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 37283581 - 37283551
Alignment:
Q  5 aaaatttagtgacggaattagagagggattt 35  Q
    |||||||||||||||||||||||||||||||    
T  37283581 aaaatttagtgacggaattagagagggattt 37283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 27182736 - 27182785
Alignment:
Q  8 atttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| |||||||||| |||||   |||||||||||||||||||    
T  27182736 atttagtgacgaaattagagagagatttcttgttttccctcactaaattt 27182785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 20615420 - 20615472
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| |||| |||||||||||| |||| ||||||||| || ||||||||    
T  20615420 aaaatttaatgacagaattagagaggaatttcacgttttccttctctaaattt 20615472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 27711241 - 27711269
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagag 29  Q
    |||||||||||||||||||||||||||||    
T  27711241 tcgcaaaatttagtgacggaattagagag 27711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4340473 - 4340415
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4340473 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 4340415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41120810 - 41120868
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41120810 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 41120868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41071908 - 41071964
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41071908 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 41071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46786031 - 46786089
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46786031 tcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaaatttag 46786089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22603614 - 22603558
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22603614 tcgcaaaatttagtgacggaattagagagcgattttacgttttccctcactaaattt 22603558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29549484 - 29549428
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29549484 tcgcgaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 29549428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9464169 - 9464113
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9464169 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 9464113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12161880 - 12161824
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  12161880 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 12161824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15243151 - 15243095
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15243151 tcgcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaattt 15243095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22158868 - 22158812
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22158868 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 22158812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23457963 - 23457907
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23457963 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 23457907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28229528 - 28229580
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28229528 tcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaa 28229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 50845403 - 50845459
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  50845403 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 50845459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52183744 - 52183688
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  52183744 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 52183688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6459283 - 6459229
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  6459283 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 6459229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9110048 - 9110102
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  9110048 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 9110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9177166 - 9177108
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  9177166 tcgcaaaatttagtgacgaaattaaagagggattttacgtttttcctcactaaatttag 9177108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12720875 - 12720821
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  12720875 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 12720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41752499 - 41752445
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  41752499 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 41752445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45839358 - 45839304
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  45839358 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 45839304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13523034 - 13523087
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  13523034 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaa 13523087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9259256 - 9259312
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  9259256 tcgcaaaatttagtgacggaattagagagagatttcacgttttccctcacaaaattt 9259312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12370014 - 12370070
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  12370014 tcgcaaaatttagtgacggaattagagaaggattttatgttttcccttactaaattt 12370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13102382 - 13102326
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  13102382 tcgcaaaatttagtgacggaattagaaagagattttatgttttccctcactaaattt 13102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14760933 - 14760877
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  14760933 tcgcaaaatttagtgacggaattagtgagggatttcatgttttccctcactaaattt 14760877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18894973 - 18895029
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  18894973 tcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcactaaattt 18895029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19865310 - 19865258
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  19865310 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaa 19865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20408233 - 20408289
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  20408233 tcgcaaaatttagtaacggaattagagagggatttcacgttttccctcacaaaattt 20408289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32046942 - 32046886
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  32046942 tcgcaaaatttagtgtcggaattagagagagattttacgttttccctcactatattt 32046886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41063263 - 41063207
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  41063263 tcgcaaaatttagtgacggaattagagagagattttatgtttttcctcactaaattt 41063207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 46790066 - 46790014
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  46790066 tcgcaaaatttaatgacggaattagaaagggattttacgttttccctcactaa 46790014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6412126 - 6412180
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  6412126 tcgcaaaatttagtgacggaattaaagagggatttcatgttttccctcactaaat 6412180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12174839 - 12174893
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  12174839 tcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaat 12174893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7181631 - 7181684
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  7181631 caaaatttagtgacggaattagagagggatttcacgttttcccttacaaaattt 7181684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41359054 - 41359001
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagaggga-ttttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41359054 tcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaa 41359001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 50092374 - 50092427
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  50092374 caaaatttagtgacggaattagagagggatttcatgttttccctcacaaaattt 50092427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7830097 - 7830041
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  7830097 tcgcaaaatttagtgacgaaattagggagggatttcatgttttccctcactaaattt 7830041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8941071 - 8941119
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  8941071 aaaatttagcgacggaattagagaggaattttacgttttccctcactaa 8941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 9985404 - 9985456
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  9985404 aaaatttattgacggaattagagagggattttacgtttttcctcacaaaattt 9985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14486705 - 14486761
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||    
T  14486705 tcgcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattt 14486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17661116 - 17661060
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||| ||||||    
T  17661116 tcgcaaaatttagtgatggaattagagaggaatttcacgttttccctcacaaaattt 17661060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18890622 - 18890678
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||    
T  18890622 tcgcaaaatttagtaacggaattagagagggatttcacgttttctctcacaaaattt 18890678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38531243 - 38531299
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||    
T  38531243 tcgcaaaatttagtgatggaattagagagagatttcacgttttccctctctaaattt 38531299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 13195648 - 13195593
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||    
T  13195648 cgcaaaatttagtgacagaattagagagggattttgcattttccctctctaaattt 13195593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46339518 - 46339572
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  46339518 tcgcaaaatttagtgacggaattagagagagatttcatgttttcccttactaaat 46339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11917852 - 11917799
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||| |||||    
T  11917852 tcgcaaaatttagtgacggaattagaaagggagttcacgttttccctctctaaa 11917799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 19081790 - 19081741
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  19081790 aaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 19081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 19129678 - 19129629
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  19129678 aaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 19129629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26825302 - 26825253
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  26825302 aaaatttagtgacggaattagagaggaatttcacgttttccctctctaaa 26825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9882110 - 9882162
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||| |||| | ||||| |||||||||    
T  9882110 tcgcaaaatttagtgacggaattagagaggaatttaatgtttttcctcactaa 9882162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22789664 - 22789720
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||||| || ||||| |||||||||||| ||||||||    
T  22789664 tcgcaaaatttagtgactgaattagatagagatttcacgttttccctctctaaattt 22789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51973490 - 51973434
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||  |||| || ||||||||||| ||||||    
T  51973490 tcgcaaaatttagtgacggaattagagagaaatttcacattttccctcacaaaattt 51973434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 16258561 - 16258615
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||| |||||| ||| ||||||| |||| ||||||||    
T  16258561 gcaaaatttagtgacggaattatagagggttttcacgtttttcctctctaaattt 16258615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 25788070 - 25788104
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  25788070 tcgcaaaatttagtgacggaattagagagggattt 25788104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20580975 - 20580922
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||| | ||| |||||||||||||||| |||||||||||| |||||    
T  20580975 tcgcaaaatttaattacgaaattagagagggatttcacgttttccctctctaaa 20580922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13308893 - 13308945
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| | |||||||||||||||| | ||||| |||||||||    
T  13308893 tcgcaaaatttagtgatgaaattagagagggatttcatgtttttcctcactaa 13308945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 16913654 - 16913706
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| | |||||||||||||||||||| | |||||||||| ||||||||    
T  16913654 aaaatttaataacggaattagagagggatttcatgttttccctctctaaattt 16913706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17200083 - 17200139
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| ||| | ||||||  |||| |||||||||||||    
T  17200083 tcgcaaaatttagtgacggaattaaagaagaattttatatttttcctcactaaattt 17200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 20290397 - 20290449
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||  ||||| |||||||| ||||| ||||||    
T  20290397 aaaatttagtgacggaattagagaatgatttcacgttttctctcacaaaattt 20290449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29093627 - 29093683
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||| ||||||||||||| ||||||| |||||| || ||||||||    
T  29093627 tcgcaaaatttaatgatggaattagagaggaattttacattttccatctctaaattt 29093683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30673556 - 30673504
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| |  ||||||||||||||||| | |||||||||||||||||||    
T  30673556 aaaatttagtaatagaattagagagggatttcatgttttccctcactaaattt 30673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39748999 - 39748943
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||| ||| ||||||| | ||||||| |||||||||||    
T  39748999 tcgcaaaatttagtgacgaaatttgagggggatttcatgttttccttcactaaattt 39748943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 46865308 - 46865253
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||| | |||||||||||||||||| ||||| |||||| || |||||    
T  46865308 cgcaaaatttagtaatggaattagagagggatttcacgttctccctctctgaattt 46865253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48522584 - 48522533
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcacta 52  Q
    |||||||||||||||||||||||  ||||| |||| | ||||||||||||||    
T  48522584 tcgcaaaatttagtgacggaatttaagaggaatttcatgttttccctcacta 48522533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 25687355 - 25687409
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||||||||||| | | ||||||| || ||||||||    
T  25687355 gcaaaatttagtgaaggaattagagagggatgtaatgttttccttctctaaattt 25687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12806914 - 12806963
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacg-ttttccctcactaa 53  Q
    |||||||||||||||||||| |||||||||| | | ||||||||||||||    
T  12806914 aaaatttagtgacggaattatagagggatttcaagtttttccctcactaa 12806963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45918979 - 45919028
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcacta 52  Q
    |||||||||||| || ||||||||||||||||| | ||| ||||||||||    
T  45918979 gcaaaatttagtaacagaattagagagggatttgatgttatccctcacta 45919028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6091330 - 6091386
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 58  Q
    |||||||||  ||||| |||||||| ||| |||||||||||||| || |||||||||    
T  6091330 cgcaaaattctgtgacagaattagataggaattttacgttttccatctctaaattta 6091386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12989918 - 12989862
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| ||||||||| ||||||| ||| ||||| |||||||||||| | ||||||    
T  12989918 tcgcaaagtttagtgactgaattagggagagatttcacgttttccctctcaaaattt 12989862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 17734031 - 17734083
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||| |||||||| ||| ||||| | |||||||||||||||||||    
T  17734031 aaaatttaatgatggaattagcgagagatttcatgttttccctcactaaattt 17734083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15063 - 15120
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15063 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 15120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7571 - 7515
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7571 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 7515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3808 - 3752
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3808 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 202840 - 202784
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  202840 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattt 202784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 276207 - 276263
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  276207 tcgcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaattt 276263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10050909 - 10050965
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10050909 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 10050965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31425584 - 31425640
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31425584 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 31425640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21917407 - 21917461
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21917407 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 21917461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 21623086 - 21623029
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21623086 cgcaaaatttagtgatggaattagagagggattttacgttttccctcactaaatttag 21623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1842960 - 1842904
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1842960 tcgcaaaatttagtgacggaattagggagggattttacgttttccctcactaaattt 1842904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3904551 - 3904603
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3904551 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 3904603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45664834 - 45664778
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45664834 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatattt 45664778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2650901 - 2650949
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctca 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2650901 tcgcaaaatttagtgacggaattagagagggattttacgttttccctca 2650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6849284 - 6849340
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  6849284 tcgcaaaatttagtgacggaattagagagagattttacgttttacctcactaaattt 6849340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 9698615 - 9698667
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9698615 aaaatttagtgacggaattagagaggaattttacgttttccctcactaaattt 9698667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11036573 - 11036517
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11036573 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 11036517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18217895 - 18217839
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  18217895 tcgcaaaatttagtgacgaaattagagagggattttacgtttttcctcactaaattt 18217839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20174086 - 20174030
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20174086 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 20174030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22486460 - 22486404
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  22486460 tcgcaaaatttagtgacggaattagagagggatttcacgttttccgtcactaaattt 22486404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23577262 - 23577318
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23577262 tcgcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaattt 23577318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 23750813 - 23750865
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23750813 aaaatttagtgacggaattagagagggattttacattttccctcactaaattt 23750865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24605904 - 24605848
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  24605904 tcgcaaaatttagtgacggaattagagagagatttcacgttttccctcactaaattt 24605848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36636572 - 36636516
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  36636572 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 36636516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40847508 - 40847564
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  40847508 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 40847564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15014478 - 15014532
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  15014478 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 15014532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28800944 - 28800890
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  28800944 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 28800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47523723 - 47523777
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  47523723 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 47523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 3872263 - 3872312
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3872263 caaaatttagtgacggaattagagagagattttacgttttccctcactaa 3872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 816264 - 816320
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  816264 tcgcaaaatttagtgacggaattagagagggatttcacgttttccatctctaaattt 816320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20429527 - 20429475
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20429527 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 20429475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32267413 - 32267357
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  32267413 tcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaattt 32267357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 37135362 - 37135414
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  37135362 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 37135414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39979697 - 39979753
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  39979697 tcgcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaattt 39979753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 22501659 - 22501604
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  22501659 cgcaaaatttaatgacggaattagagagggatttcacgttttccctctctaaattt 22501604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23232105 - 23232051
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  23232105 tcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaat 23232051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 27806080 - 27806030
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  27806080 aaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 27806030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42926493 - 42926547
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  42926493 tcgcaaaatttagtgacggaattagagagggatttcatgtttttcctcactaaat 42926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20924034 - 20924087
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  20924034 caaaatttagtgacagaattagagagggatttcatgttttccctcactaaattt 20924087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31042317 - 31042264
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  31042317 tcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 31042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 687943 - 687887
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  687943 tcgcaaagtttagtgacagaattagagaaggattttacattttccctcactaaattt 687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1907421 - 1907365
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  1907421 tcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcactagattt 1907365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2093439 - 2093487
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  2093439 aaaatttagtgacggaattagagagagatttgacgttttccctcactaa 2093487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2457736 - 2457680
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||    
T  2457736 tcgcaaaatttagtgacggaatttgagagggatttcatgttttccctcacaaaattt 2457680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26577331 - 26577279
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  26577331 tcgcaaaatttagtgacggtattagagagggatttcatgttttccctcactaa 26577279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38057698 - 38057642
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  38057698 tcgcaaagtttagtgacggaattaaagagggatttcacgttttccctcgctaaattt 38057642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7733385 - 7733439
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||    
T  7733385 tcgcaaaatttagagacggaattagagagggatttcatgttttacctcactaaat 7733439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 15969846 - 15969796
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  15969846 aaaatttagtgacggaattagagaggaatttcatgttttccctcactaaat 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23539298 - 23539248
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcact 51  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  23539298 tcgcaaaatttaatgacggaattagagagggatttcacgtattccctcact 23539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1824273 - 1824325
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||| |||| |  ||||||||||||||    
T  1824273 tcgcaaaatttagtgacggaattagagaggaatttcatattttccctcactaa 1824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4514831 - 4514779
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| |||||||||||||||||| |  ||||||||||||||    
T  4514831 tcgcaaaatttagtgaaggaattagagagggatttcatattttccctcactaa 4514779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10222702 - 10222758
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||| ||||||||||||||||||||||||||  || ||||||||    
T  10222702 tcgcaaaatttaatgacagaattagagagggattttacgttttctttctctaaattt 10222758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14786708 - 14786764
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||  |||||||    
T  14786708 tcgcaaaatttagtgacggaattaaaaaggaattttacgttttccctcgttaaattt 14786764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23699898 - 23699954
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||||||| ||||||    
T  23699898 tcgcaaaatttagtgacagaattaaagagggatttcacattttccctcacaaaattt 23699954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 24140512 - 24140460
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||||||||    
T  24140512 aaaatttaatgacggaattggagaaggattttatgttttccctcactaaattt 24140460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 33427752 - 33427704
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||    
T  33427752 aaaatttagtgacggaattagagaggaatttcatgttttccctcactaa 33427704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48933202 - 48933146
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||| ||||||    
T  48933202 tcgcaaaatttagtgacggaattagagaggaatttcacgttttttctcacaaaattt 48933146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21871634 - 21871582
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||    |||||||| ||||||||||||||||||    
T  21871634 tcgcaaaatttagtgacggaattaga----gattttacattttccctcactaaattt 21871582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 11852071 - 11852021
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||| |||||| | |||||||||| |||||    
T  11852071 caaaatttagtgacggaattagagaaggatttcaggttttccctctctaaa 11852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26415486 - 26415437
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||| ||||| |||||||||||||||||| |||| |||||    
T  26415486 aaaatttagtgacgaaattaaagagggattttacgtttttcctctctaaa 26415437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25777189 - 25777241
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| | |||||||||| ||||| |||||||||||| ||||||||    
T  25777189 aaaatttagtgatgaaattagagagtgatttcacgttttccctctctaaattt 25777241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 27304935 - 27304895
Alignment:
Q  2 cgcaaaatttagtgacggaattagagagggattttacgttt 42  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  27304935 cgcaaaatttagtgacggaattagagagggatgtcacgttt 27304895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 36993882 - 36993830
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  36993882 aaaatttagtgacggaattagaaagagatttcatgtttttcctcactaaattt 36993830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27130398 - 27130344
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||  |||||||||| || ||||||||| ||||||||    
T  27130398 tcgcaaaagttagtgacggaatt--agagggatttcacattttccctctctaaattt 27130344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 5235420 - 5235452
Alignment:
Q  8 atttagtgacggaattagagagggattttacgt 40  Q
    |||||||||||||||||||||||||||| ||||    
T  5235420 atttagtgacggaattagagagggatttcacgt 5235452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25398068 - 25398012
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398068 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 25398012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28364977 - 28364921
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364977 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 28364921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15448451 - 15448393
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15448451 tcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaaatttag 15448393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 495700 - 495756
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  495700 tcgcaaaatttagtgacggaattagagagtgattttacgttttccctcactaaattt 495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9893029 - 9892973
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9893029 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattt 9892973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15364531 - 15364587
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15364531 tcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaattt 15364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21990247 - 21990303
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21990247 tcgcaaaaattagtgacggaattagagagggattttacgttttccctcactaaattt 21990303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 5192266 - 5192314
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5192266 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 5192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12499282 - 12499230
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12499282 tcgcaaaatttagtgacggagttagagagggattttacgttttccctcactaa 12499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12506611 - 12506559
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12506611 tcgcaaaatttagtgacggagttagagagggattttacgttttccctcactaa 12506559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12509619 - 12509671
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12509619 tcgcaaaatttagtgacggagttagagagggattttacgttttccctcactaa 12509671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20182211 - 20182155
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20182211 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 20182155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20692884 - 20692936
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20692884 tcgcaaaatttagtgacgaaattagagagggattttacgttttccctcactaa 20692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21141005 - 21140949
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  21141005 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 21140949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22153780 - 22153836
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22153780 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 22153836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22579422 - 22579478
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22579422 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 22579478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23281852 - 23281796
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23281852 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 23281796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27705488 - 27705432
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  27705488 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 27705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2992681 - 2992627
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2992681 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 2992627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6598530 - 6598476
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  6598530 tcgcaaaatttagtgacggaattagagagggatttcaagttttccctcactaaat 6598476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26939653 - 26939599
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26939653 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 26939599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 343636 - 343692
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  343636 tcgcaaattttagtgacagaattagagagggattttacgttttccctcattaaattt 343692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2669375 - 2669319
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  2669375 tcgcaaaatttagtgacggaattagagaggaattttacgtttttccacactaaattt 2669319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12845069 - 12845013
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  12845069 tcgcaaaatttagtgacggaattagagagagatttcacgttttccctctctaaattt 12845013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12951774 - 12951718
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  12951774 tcgcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaattt 12951718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 14886623 - 14886571
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  14886623 aaaatttagtgacggaattagagagggatttgatgttttccctcactaaattt 14886571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15961480 - 15961532
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15961480 tcgcaaaatttagtaacggaattagagaggaattttacgttttccctcactaa 15961532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18033598 - 18033654
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  18033598 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcattaaattt 18033654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19175850 - 19175902
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  19175850 tcgcaaaatttagtgacggaattagagaggaattttacattttccctcactaa 19175902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22083904 - 22083848
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  22083904 tcgcaaaattttgtgacggaattagagagggatttcatgttttccctcactaaattt 22083848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 27796909 - 27796961
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  27796909 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 27796961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30834033 - 30834089
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  30834033 tcgcaaaatttaatgacagaattagagagggattttacgttctccctcactaaattt 30834089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5360475 - 5360428
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctc 48  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5360475 tcgcaaaatttagtgacggaattagagagagattttacgttttccctc 5360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 26224491 - 26224440
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  26224491 caaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 26224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11049824 - 11049878
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  11049824 tcgcaaaatttagtgacggaattagagagagatttcatgttttccctcactaaat 11049878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12160923 - 12160973
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12160923 aaaatttagtgacgaaattagagagggattttatgttttccctcactaaat 12160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 14872182 - 14872133
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  14872182 caaaatttagtgacggaattagagagggatttcatgttttccctcactaa 14872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11077715 - 11077663
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  11077715 tcgcaaaatttagtgacggtattagagagggatttcatgttttccctcactaa 11077663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11350248 - 11350196
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  11350248 tcgcaaaatttagtgacagaattagagagcgattttatgttttccctcactaa 11350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11530287 - 11530235
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  11530287 aaaatttagtgacggaattagagatggatttcatgttttccctcactaaattt 11530235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13145068 - 13145016
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  13145068 tcgcaaaatttagtgacggaattaaagagagatttcacgttttccctcactaa 13145016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14036686 - 14036630
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||    
T  14036686 tcgcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaattt 14036630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16250875 - 16250931
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  16250875 tcgcaaaatttagtgacagaattagagagagatttcacgttttccctcacaaaattt 16250931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17919602 - 17919554
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctca 49  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  17919602 tcgcaaaatttagtgacggaattagagagggattttacagtttccctca 17919554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18492435 - 18492379
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||    
T  18492435 tcgcaaaatttagtgacggaattagagtgggatttcacgttttcccttacaaaattt 18492379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24661082 - 24661136
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||| |||||||||||||||| ||||| | |||||||||||||||||    
T  24661082 tcgcaaaatttaatgacggaattagagagagatttcatgttttccctcactaaat 24661136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33250781 - 33250835
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||| ||||||||||||| |||| | |||||||||||||||||    
T  33250781 tcgcaaaatttagtgatggaattagagaggaatttcatgttttccctcactaaat 33250835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21691569 - 21691622
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||| |||||    
T  21691569 tcgcaaaatttagtgacgaaattagagagggatttcacgtttttcctctctaaa 21691622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6605569 - 6605621
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||| ||||||||||||||||||| ||||| | |||||||||||||||    
T  6605569 tcgcaaaatatagtgacggaattagagagagatttcatgttttccctcactaa 6605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12351659 - 12351715
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||||||||||||||||  |||| |||||||||||| ||||||||    
T  12351659 tcgcaaaatttaatgacggaattagagagaaatttcacgttttccctctctaaattt 12351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12680261 - 12680313
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||||| |||| |||||||||||| ||||||||    
T  12680261 aaaatttaatgacggaattagagaggaatttcacgttttccctctctaaattt 12680313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28668166 - 28668114
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||| ||||||||||||| |||||||||||  |||||||||||||    
T  28668166 tcgcaaaatttaatgacggaattagaaagggattttacaatttccctcactaa 28668114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 12205262 - 12205305
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctc 48  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||    
T  12205262 aaaatttagtgacggaattagtgagggatttcacgttttccctc 12205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1939315 - 1939365
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcact 51  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||||||    
T  1939315 tcgcaaaatttaatgacggaattagagagggatttcatgttttctctcact 1939365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 9885307 - 9885253
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||  ||||| |||||||||| | |||||||||||||||||||    
T  9885307 gcaaaatttagtgacaaaattaaagagggatttcatgttttccctcactaaattt 9885253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 12200756 - 12200706
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||| |||||||||||||||||| |  ||||||||||||||||    
T  12200756 aaaatttagtgagggaattagagagggatttcatattttccctcactaaat 12200706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 5270454 - 5270405
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||||||||||| |||| || ||||||||| |||||    
T  5270454 aaaatttagtgacggaattagagaggaatttcacattttccctctctaaa 5270405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3673210 - 3673262
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||   ||||||| |||| |||||||||||||    
T  3673210 aaaatttagtgacggaattagagaaaaattttacatttttcctcactaaattt 3673262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18048854 - 18048798
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||  ||||||| ||||||||| | ||||| |||||||||||||    
T  18048854 tcgcaaaatttagtgagagaattagggagggatttcatgtttttcctcactaaattt 18048798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33547612 - 33547560
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||  ||||||| |||||||| | |||||||||||||||    
T  33547612 tcgcaaaatttagtgacaaaattagatagggatttcatgttttccctcactaa 33547560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6978343 - 6978300
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttc 44  Q
    |||||||||||||||||||||||||||||| |||| | ||||||    
T  6978343 tcgcaaaatttagtgacggaattagagaggaatttcatgttttc 6978300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 11431715 - 11431769
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||| |||||||| |  |||||| |||| ||||||||    
T  11431715 gcaaaatttagtgacggaattaaagagggatatcgcgtttttcctctctaaattt 11431769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 15509218 - 15509188
Alignment:
Q  5 aaaatttagtgacggaattagagagggattt 35  Q
    |||||||||||||||||||||||||||||||    
T  15509218 aaaatttagtgacggaattagagagggattt 15509188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 13668071 - 13668123
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||| |||||||||| || |||| |||||||||||| ||||||||    
T  13668071 aaaatttaatgatggaattagaggggaatttcacgttttccctctctaaattt 13668123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16118212 - 16118156
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| ||||| |||||||||| ||||| | ||| ||||||| |||||||    
T  16118212 tcgcaaaatttaatgacgaaattagagagagatttcatgttctccctcattaaattt 16118156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23409046 - 23408990
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23409046 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 23408990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24138914 - 24138972
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24138914 tcgcaaaatttagtgacggaattagagagagattttacgttttccctcactaaatttag 24138972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26708658 - 26708716
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26708658 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttag 26708716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26978392 - 26978450
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26978392 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttag 26978450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8886924 - 8886980
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8886924 tcgcaaaatttagtgacggaattagagagggattttacattttccctcactaaattt 8886980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10494803 - 10494751
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10494803 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 10494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40484110 - 40484058
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40484110 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 40484058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 746941 - 746993
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  746941 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5982711 - 5982655
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5982711 tcgcaaagtttagtgacggaattagagagggattttaggttttccctcactaaattt 5982655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 7888859 - 7888807
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7888859 aaaatttagtgacggagttagagagggattttacgttttccctcactaaattt 7888807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 12045789 - 12045737
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12045789 aaaatttagtgacggaattagagaaggattttacgttttccctcactaaattt 12045737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17039704 - 17039760
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  17039704 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactatattt 17039760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23975701 - 23975645
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23975701 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 23975645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25652656 - 25652712
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  25652656 tcgcaaaattttgtgacggaattagagagggattttacattttccctcactaaattt 25652712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27428085 - 27428141
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  27428085 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaattt 27428141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28265548 - 28265604
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  28265548 tcgcaaaatttagtgacggaattagagagggattttacgtcttccctcacaaaattt 28265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33818634 - 33818690
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  33818634 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 33818690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38837744 - 38837796
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38837744 tcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaa 38837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 618360 - 618306
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  618360 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 23423831 - 23423885
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  23423831 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 23423885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16631950 - 16631999
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16631950 caaaatttagtgacggaattagagagggattttacgttttccttcactaa 16631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 36831966 - 36832019
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36831966 caaaatttagtgatggaattagagagggattttacattttccctcactaaattt 36832019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15061039 - 15060983
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  15061039 tcgcaaaatttagtgacggaattagagagggatttcacgtttttcctcacaaaattt 15060983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17772041 - 17772093
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17772041 tcgcaaaatttagtgacggaattagagagagattttatgttttccctcactaa 17772093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25397861 - 25397913
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  25397861 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaa 25397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36196460 - 36196404
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  36196460 tcgcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaattt 36196404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 16121915 - 16121966
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16121915 caaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 16121966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17036485 - 17036540
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  17036485 tcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatt 17036540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2472787 - 2472841
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||||||||    
T  2472787 tcgcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaat 2472841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12328299 - 12328353
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  12328299 tcgcaaaatttagtgacggaattagagaggaatttcatgttttccctcactaaat 12328353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35620416 - 35620470
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  35620416 tcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaat 35620470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11927859 - 11927912
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  11927859 tcgcaaaatttagtgacggaattagagagggatttcacgttttccgtctctaaa 11927912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4125261 - 4125313
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  4125261 tcgcaaaatttagtgacggaattagagagagatttcacattttccctcactaa 4125313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8108933 - 8108989
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||    
T  8108933 tcgcaaaatttagtgacggaattagagaggaatttcatgttttccctcacaaaattt 8108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13620200 - 13620256
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||    
T  13620200 tcgcaaaattttgtgacagaattagagagggatttcatgttttccctcactaaattt 13620256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17079471 - 17079415
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||    
T  17079471 tcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaattt 17079415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20959570 - 20959518
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  20959570 aaaatttagtgacggaattagagagagatttcacgttttccctctctaaattt 20959518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33816831 - 33816887
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||    
T  33816831 tcgcaaaatttagtgacggaattagaaaggaatttcatgttttccctcactaaattt 33816887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 13974156 - 13974207
Alignment:
Q  6 aaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  13974156 aaatttagtgacggaatcagagagggatttcacgttttccctcacaaaattt 13974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17986795 - 17986741
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||||||||||    
T  17986795 tcgcaaaatttagtgacggaattagagaagaatttcatgttttccctcactaaat 17986741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7003803 - 7003857
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  7003803 tcgcaaaatttagtgacggaattagaga--gatttcacgttttccctcacaaaattt 7003857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20188014 - 20188070
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||| ||||||||||||    
T  20188014 tcgcaaaatttaatgacagaattagagagtgattctacgttttctctcactaaattt 20188070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22649406 - 22649458
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| ||||||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctctctaaattt 22649458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25673301 - 25673357
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| |||||||||||||||||||||||| | ||||||  |||||||||||    
T  25673301 tcgcaaaattcagtgacggaattagagagggatttcatgttttctgtcactaaattt 25673357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32726799 - 32726855
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||  |||| || ||||||||| ||||||||    
T  32726799 tcgcaaaatttagtgacggaattagagagaaatttcacattttccctctctaaattt 32726855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36597417 - 36597465
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  36597417 aaaatttagtgacagaattagagaggaattttatgttttccctcactaa 36597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10420325 - 10420378
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    |||||||||||||||||  |||||||||||||||| | |||||||||| |||||    
T  10420325 tcgcaaaatttagtgacaaaattagagagggatttcatgttttccctctctaaa 10420378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 36716277 - 36716329
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||| ||| ||||||||||| |||||| |||||||||||||| ||||||    
T  36716277 aaaatttaatgaaggaattagagaaggatttcacgttttccctcacaaaattt 36716329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 29727928 - 29727975
Alignment:
Q  10 ttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||| |||| |||||||||||| | ||||||    
T  29727928 ttagtgacggaattagagaggaatttcacgttttccctcgcaaaattt 29727975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31853161 - 31853208
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctc 48  Q
    ||||||||||||||||||||||||||||| ||||| | ||||| ||||    
T  31853161 tcgcaaaatttagtgacggaattagagagagatttcatgtttttcctc 31853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3080772 - 3080825
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||| ||||||| | |||| ||||||||||| | |||||||||||||||||||    
T  3080772 caaaacttagtgatgaaatttgagagggatttcatgttttccctcactaaattt 3080825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10736 - 10794
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttag 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10736 tcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttag 10794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26549 - 26495
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26549 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 26495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6052 - 6108
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6052 tcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaaattt 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9302 - 9358
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9302 tcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaattt 9358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 74614 - 74670
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  74614 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 74670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 58648 - 58592
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  58648 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattt 58592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 84747 - 84799
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  84747 tcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaa 84799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 121060 - 121113
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaa 54  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  121060 tcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaa 121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 440029 - 439977
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  440029 tcgcaaaatttagtgacggaattagagagggattttacattttccctcactaa 439977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 992 - 1046
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  992 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19669 - 19615
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  19669 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 19615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 173510 - 173456
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  173510 tcgcaaaatttagtgacggaattagagagtgattttatgttttccctcactaaat 173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8183 - 8237
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  8183 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 8237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21915 - 21969
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21915 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaat 21969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 84366 - 84313
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  84366 caaaatttagtgacggaattagagagggatttcacattttccctcacaaaattt 84313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7522 - 7466
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7522 tcgcaaagtttagtgacagaattagagagggatttcacgttttccctcactaaattt 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37860 - 37916
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  37860 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaattt 37916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10224 - 10168
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  10224 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcagtaaattt 10168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 182596 - 182544
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  182596 tcgcaaaatttagtgacggaattagagagggattttacaatttccctcactaa 182544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 219702 - 219648
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaat 55  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  219702 tcgcaaaatttagtaacggaattagagagggatttcatgttttccctcactaaat 219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 215744 - 215781
Alignment:
Q  16 acggaattagagagggattttacgttttccctcactaa 53  Q
    ||||||||||||||||||||||||||||||||||||||    
T  215744 acggaattagagagggattttacgttttccctcactaa 215781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12718 - 12663
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||    
T  12718 tcgcaaaatttagtgacggaattagagaggga-ttcacgttttccctcacaaaattt 12663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43983 - 43927
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||    
T  43983 tcgcaaaatttaataacggaattagagaagaattttacgttttccctcactaaattt 43927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6859 - 6805
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| ||||||||||||||||| |||| | |||||||||||||||||||    
T  6859 gcaaaatttaatgacggaattagagaggaatttcatgttttccctcactaaattt 6805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 39778 - 39824
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctca 49  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39778 gcaaaatttagtgacggaattagagagagatttcacgttttccctca 39824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3235 - 3282
Alignment:
Q  1 tcgcaaaatttagtgacggaattagagagggattttacgttttccctc 48  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  3235 tcgcaaaatttagtgacagaattagtgagggatttcacgttttccctc 3282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 112392 - 112338
Alignment:
Q  3 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||| || |||||    
T  112392 gcaaaatttaatgacggaattagagagggatttaacgtttttcctctctgaattt 112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 74794 - 74845
Alignment:
Q  5 aaaatttagtgacggaattagagagggattttacg-ttttccctcactaaat 55  Q
    ||||||||||||| ||||||||||||||||| | | ||||||||||||||||    
T  74794 aaaatttagtgacagaattagagagggatttcatgtttttccctcactaaat 74845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 10955 - 10902
Alignment:
Q  4 caaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 57  Q
    |||||||||||||| |||||||||||| |||| | ||||| ||||| |||||||    
T  10955 caaaatttagtgacagaattagagaggaatttcatgtttttcctcagtaaattt 10902  T

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