View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18947_high_47 (Length: 281)
Name: NF18947_high_47
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18947_high_47 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 2 - 262
Target Start/End: Original strand, 8902178 - 8902439
Alignment:
| Q |
2 |
gtgggtagattat-acttagtcacggtcatgtataaatattatatgtgattatgattacattaagaagtgaatttaacgcaaagatgaagaaaattagtc |
100 |
Q |
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| T |
8902178 |
gtgggtaaattatgacttagtcacggtcatgtataaatattatatgtgattatgattacattaagaagtgaatttaacgcaaagatgaagaaaattagtc |
8902277 |
T |
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| Q |
101 |
atggtcatatacattatatttggatgatgtcatatatcacggtaagaaaattataattataattattttgtttggcatgatggacctaaagtttgaaaca |
200 |
Q |
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| T |
8902278 |
atggtcatatacattatatttggatgatgtcatatatcacggtaagaaaattataattataattattttgtttggcatgatggacctaaagtttgaaaca |
8902377 |
T |
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| Q |
201 |
catgaattggaactcattatttttccatttgtttttaacctttttatggtcataaaagatta |
262 |
Q |
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| T |
8902378 |
catgaattggaactcattatttttccatttgtttttaacctttttatggtcataaaagatta |
8902439 |
T |
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