View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18947_high_60 (Length: 249)
Name: NF18947_high_60
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18947_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1771484 - 1771249
Alignment:
| Q |
1 |
tggacttatatttcaattatgaataaatggagttatctgttgtttttacttcattcttttgtttcaacattaaggtgtttgttattcctctatttgatgt |
100 |
Q |
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| T |
1771484 |
tggacttatatttcaattatgaataaatggagttatctgttgtttttacttcattcttttgtttcaacattaaggtgtttgttattcctctatttgatgt |
1771385 |
T |
|
| Q |
101 |
atagttgataatataatcatgtagtgtaattgtttcttaaatgttcttaactttcacaatctagtccttgcaccgcctccttgctcttctagggtttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1771384 |
atagttgataatataatcatgtagtgtaattgtttcttaaatgttcttaactttcacaatctagtccttgcaccgcctccttgctcttctagggtttgtt |
1771285 |
T |
|
| Q |
201 |
agggttttggtgtatagggttttatataatcagttt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
1771284 |
agggttttggtgtatagggttttatataatcagttt |
1771249 |
T |
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