View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18947_high_75 (Length: 226)

Name: NF18947_high_75
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18947_high_75
NF18947_high_75
[»] chr1 (75 HSPs)
chr1 (1-213)||(14094036-14094248)
chr1 (65-216)||(11135736-11135887)
chr1 (65-216)||(11430438-11430588)
chr1 (68-215)||(41917995-41918142)
chr1 (65-216)||(32848615-32848766)
chr1 (69-216)||(41095641-41095788)
chr1 (107-213)||(24436502-24436608)
chr1 (83-212)||(28109883-28110011)
chr1 (64-192)||(44739114-44739242)
chr1 (104-213)||(13388372-13388483)
chr1 (96-216)||(50773143-50773263)
chr1 (64-213)||(13114705-13114854)
chr1 (109-204)||(29418522-29418617)
chr1 (95-210)||(50424904-50425019)
chr1 (71-199)||(4578625-4578752)
chr1 (86-176)||(22540386-22540476)
chr1 (98-216)||(43832299-43832417)
chr1 (61-166)||(9165295-9165400)
chr1 (86-176)||(15523228-15523318)
chr1 (86-176)||(15531222-15531312)
chr1 (86-176)||(19101673-19101763)
chr1 (63-137)||(41095601-41095675)
chr1 (106-213)||(15660931-15661036)
chr1 (69-175)||(18157039-18157145)
chr1 (85-166)||(28941839-28941920)
chr1 (65-166)||(43851117-43851218)
chr1 (61-173)||(6133699-6133811)
chr1 (65-137)||(13388331-13388403)
chr1 (98-176)||(2225254-2225332)
chr1 (98-212)||(41958113-41958226)
chr1 (107-173)||(50308822-50308888)
chr1 (65-137)||(11135853-11135925)
chr1 (86-173)||(24911483-24911568)
chr1 (92-166)||(32211866-32211940)
chr1 (64-137)||(11430555-11430627)
chr1 (87-176)||(28218120-28218209)
chr1 (87-176)||(37553021-37553110)
chr1 (106-166)||(50539162-50539222)
chr1 (64-151)||(25543336-25543423)
chr1 (109-187)||(5848086-5848164)
chr1 (182-216)||(11430476-11430510)
chr1 (65-171)||(26980339-26980445)
chr1 (64-137)||(29418595-29418669)
chr1 (127-213)||(30678947-30679032)
chr1 (106-176)||(36566934-36567004)
chr1 (64-149)||(39019571-39019650)
chr1 (182-216)||(41918030-41918064)
chr1 (107-213)||(41948182-41948287)
chr1 (86-176)||(44271936-44272026)
chr1 (63-137)||(50773103-50773177)
chr1 (180-213)||(4578686-4578719)
chr1 (182-215)||(13388450-13388483)
chr1 (85-170)||(14340999-14341084)
chr1 (60-213)||(21977179-21977332)
chr1 (107-176)||(33193089-33193158)
chr1 (68-176)||(3872706-3872813)
chr1 (109-173)||(8741298-8741362)
chr1 (182-214)||(9165339-9165371)
chr1 (65-137)||(14093995-14094067)
chr1 (88-212)||(15928575-15928698)
chr1 (86-176)||(10659840-10659931)
chr1 (94-209)||(43275801-43275916)
chr1 (182-216)||(11135774-11135808)
chr1 (182-216)||(32848694-32848728)
chr1 (182-216)||(41095720-41095754)
chr1 (86-151)||(46335112-46335180)
chr1 (83-133)||(50308772-50308822)
chr1 (186-216)||(50308792-50308822)
chr1 (182-215)||(14094112-14094145)
chr1 (143-208)||(14562604-14562669)
chr1 (62-102)||(13889292-13889332)
chr1 (184-216)||(28109903-28109935)
chr1 (92-176)||(29673499-29673583)
chr1 (61-133)||(39039470-39039542)
chr1 (85-137)||(43832383-43832435)
[»] chr5 (48 HSPs)
chr5 (65-215)||(42224624-42224774)
chr5 (104-216)||(24915091-24915203)
chr5 (106-216)||(24990924-24991034)
chr5 (65-213)||(40971488-40971636)
chr5 (64-216)||(4959274-4959426)
chr5 (65-216)||(13456197-13456346)
chr5 (84-216)||(17568734-17568866)
chr5 (69-213)||(8912511-8912655)
chr5 (85-216)||(26072120-26072251)
chr5 (85-216)||(6263900-6264029)
chr5 (92-216)||(32050331-32050455)
chr5 (64-206)||(31542284-31542427)
chr5 (104-213)||(34818222-34818331)
chr5 (58-137)||(42224578-42224657)
chr5 (86-176)||(27592524-27592614)
chr5 (86-176)||(30325946-30326036)
chr5 (68-138)||(32050420-32050490)
chr5 (107-176)||(5413809-5413878)
chr5 (104-176)||(10142048-10142120)
chr5 (87-166)||(32401136-32401215)
chr5 (64-176)||(28490794-28490906)
chr5 (65-136)||(26072218-26072289)
chr5 (85-138)||(4959391-4959444)
chr5 (85-169)||(10253161-10253243)
chr5 (144-213)||(27726833-27726902)
chr5 (65-209)||(34368357-34368500)
chr5 (65-137)||(40971447-40971519)
chr5 (86-176)||(17537174-17537264)
chr5 (64-137)||(24915169-24915240)
chr5 (64-137)||(24991000-24991071)
chr5 (143-213)||(32153766-32153836)
chr5 (62-176)||(39246602-39246716)
chr5 (65-150)||(32309477-32309562)
chr5 (65-137)||(6263995-6264067)
chr5 (65-137)||(17568696-17568768)
chr5 (92-176)||(25710544-25710628)
chr5 (85-137)||(34818300-34818352)
chr5 (127-166)||(10666770-10666809)
chr5 (64-138)||(1649546-1649620)
chr5 (182-216)||(40971564-40971598)
chr5 (182-216)||(42224702-42224736)
chr5 (106-176)||(43405431-43405501)
chr5 (63-132)||(25001998-25002067)
chr5 (106-171)||(34384768-34384833)
chr5 (87-176)||(37455368-37455457)
chr5 (87-176)||(41330465-41330554)
chr5 (182-218)||(10142087-10142123)
chr5 (64-176)||(10299881-10299993)
[»] chr2 (74 HSPs)
chr2 (54-214)||(42182875-42183035)
chr2 (65-216)||(28898069-28898220)
chr2 (64-210)||(1110194-1110340)
chr2 (65-216)||(4964705-4964856)
chr2 (69-216)||(37228499-37228647)
chr2 (65-216)||(31395477-31395628)
chr2 (65-218)||(15508911-15509064)
chr2 (107-213)||(24895302-24895408)
chr2 (107-210)||(6315697-6315800)
chr2 (140-216)||(37719869-37719945)
chr2 (84-159)||(10339782-10339857)
chr2 (86-212)||(10981536-10981661)
chr2 (85-215)||(33746953-33747082)
chr2 (85-153)||(1107055-1107123)
chr2 (87-210)||(9470100-9470222)
chr2 (65-212)||(26767798-26767944)
chr2 (68-151)||(45554567-45554650)
chr2 (65-174)||(18511283-18511392)
chr2 (112-189)||(38104292-38104369)
chr2 (65-137)||(42183003-42183075)
chr2 (65-212)||(12989188-12989334)
chr2 (86-212)||(6980157-6980282)
chr2 (85-166)||(8009530-8009611)
chr2 (140-209)||(21447176-21447245)
chr2 (64-137)||(37228613-37228686)
chr2 (88-213)||(44274254-44274378)
chr2 (87-212)||(11539442-11539569)
chr2 (68-175)||(19427320-19427425)
chr2 (165-216)||(27968953-27969004)
chr2 (165-216)||(28091583-28091634)
chr2 (165-216)||(28101815-28101866)
chr2 (92-171)||(42579734-42579813)
chr2 (64-137)||(37719830-37719903)
chr2 (86-210)||(19639111-19639234)
chr2 (86-210)||(19837704-19837827)
chr2 (168-216)||(20951639-20951687)
chr2 (63-151)||(41805873-41805961)
chr2 (65-192)||(23463882-23464009)
chr2 (94-213)||(37398849-37398968)
chr2 (64-175)||(42669803-42669914)
chr2 (82-152)||(8163556-8163626)
chr2 (64-137)||(20951602-20951673)
chr2 (64-130)||(27968914-27968980)
chr2 (64-130)||(28091607-28091673)
chr2 (64-130)||(28101839-28101905)
chr2 (182-216)||(28898148-28898182)
chr2 (86-176)||(34142211-34142301)
chr2 (182-216)||(42182924-42182958)
chr2 (95-156)||(17188092-17188153)
chr2 (68-137)||(28898034-28898103)
chr2 (69-176)||(3804585-3804693)
chr2 (86-166)||(25730521-25730601)
chr2 (115-155)||(32701517-32701557)
chr2 (134-210)||(36094023-36094098)
chr2 (85-157)||(43400150-43400222)
chr2 (69-176)||(16719502-16719609)
chr2 (182-216)||(1107073-1107107)
chr2 (182-216)||(4964784-4964818)
chr2 (65-115)||(19193497-19193547)
chr2 (97-175)||(19953424-19953502)
chr2 (182-216)||(31395556-31395590)
chr2 (86-176)||(38464181-38464271)
chr2 (65-171)||(41546105-41546210)
chr2 (182-216)||(45554602-45554636)
chr2 (92-137)||(31395466-31395511)
chr2 (64-137)||(37398807-37398880)
chr2 (65-134)||(40535104-40535173)
chr2 (72-132)||(6420456-6420516)
chr2 (71-123)||(20459031-20459083)
chr2 (113-216)||(25238310-25238413)
chr2 (159-211)||(27183395-27183447)
chr2 (159-211)||(27832937-27832989)
chr2 (104-176)||(37652317-37652389)
chr2 (109-173)||(44674585-44674649)
[»] chr6 (33 HSPs)
chr6 (64-216)||(19090247-19090399)
chr6 (71-213)||(35128758-35128900)
chr6 (62-196)||(6531350-6531484)
chr6 (87-213)||(19737470-19737596)
chr6 (64-213)||(10060855-10061004)
chr6 (92-216)||(4595766-4595890)
chr6 (87-213)||(373418-373544)
chr6 (85-212)||(12794850-12794977)
chr6 (86-176)||(21987310-21987400)
chr6 (61-212)||(34905329-34905479)
chr6 (87-173)||(445837-445923)
chr6 (143-215)||(6992304-6992376)
chr6 (86-176)||(5106316-5106406)
chr6 (86-212)||(10133195-10133320)
chr6 (164-216)||(9940393-9940445)
chr6 (86-176)||(31116196-31116286)
chr6 (65-137)||(19090209-19090281)
chr6 (63-174)||(25326826-25326937)
chr6 (63-174)||(26159361-26159472)
chr6 (64-137)||(10060973-10061046)
chr6 (92-170)||(12327283-12327361)
chr6 (65-175)||(12690249-12690359)
chr6 (67-137)||(19737431-19737501)
chr6 (182-215)||(6531409-6531442)
chr6 (92-137)||(9940382-9940427)
chr6 (64-157)||(29610328-29610421)
chr6 (182-216)||(4595777-4595811)
chr6 (110-176)||(12785011-12785077)
chr6 (182-216)||(19090326-19090360)
chr6 (182-216)||(19737546-19737580)
chr6 (93-175)||(26170964-26171046)
chr6 (65-166)||(12753842-12753943)
chr6 (111-176)||(12780831-12780896)
[»] chr7 (65 HSPs)
chr7 (69-216)||(13919781-13919928)
chr7 (64-216)||(26703472-26703622)
chr7 (66-213)||(45909453-45909601)
chr7 (62-214)||(17354561-17354713)
chr7 (66-210)||(22786149-22786293)
chr7 (68-216)||(25428511-25428659)
chr7 (66-213)||(19494374-19494521)
chr7 (104-216)||(19840917-19841029)
chr7 (64-213)||(24539158-24539307)
chr7 (84-216)||(14759659-14759791)
chr7 (64-213)||(17749690-17749839)
chr7 (65-212)||(33008101-33008247)
chr7 (65-208)||(10619433-10619574)
chr7 (87-176)||(22189958-22190047)
chr7 (127-213)||(26189962-26190048)
chr7 (141-206)||(21963172-21963237)
chr7 (87-175)||(7775019-7775107)
chr7 (85-204)||(42887673-42887791)
chr7 (117-211)||(46067987-46068079)
chr7 (94-213)||(47822017-47822136)
chr7 (63-137)||(13919894-13919968)
chr7 (68-177)||(14795131-14795240)
chr7 (68-177)||(15242123-15242232)
chr7 (64-213)||(27888278-27888426)
chr7 (64-176)||(31502536-31502648)
chr7 (64-212)||(32205075-32205219)
chr7 (86-176)||(44511008-44511098)
chr7 (87-176)||(11824090-11824179)
chr7 (65-134)||(19840879-19840948)
chr7 (143-212)||(26459068-26459137)
chr7 (132-204)||(31959860-31959933)
chr7 (67-137)||(26703436-26703506)
chr7 (64-133)||(2520629-2520698)
chr7 (104-161)||(41508362-41508419)
chr7 (68-176)||(46517293-46517399)
chr7 (91-175)||(29310443-29310527)
chr7 (109-176)||(11692220-11692287)
chr7 (111-206)||(34280965-34281060)
chr7 (67-177)||(48374510-48374618)
chr7 (182-216)||(26703551-26703585)
chr7 (85-139)||(31959966-31960020)
chr7 (71-137)||(45909570-45909636)
chr7 (87-212)||(6442184-6442308)
chr7 (64-137)||(37549620-37549693)
chr7 (167-216)||(37549659-37549708)
chr7 (64-212)||(1687980-1688126)
chr7 (182-218)||(7775033-7775069)
chr7 (65-137)||(14759757-14759829)
chr7 (86-146)||(19422936-19422996)
chr7 (98-138)||(31874061-31874101)
chr7 (113-213)||(46994398-46994498)
chr7 (104-151)||(8073385-8073432)
chr7 (106-157)||(38065409-38065460)
chr7 (182-216)||(11824106-11824140)
chr7 (86-176)||(12271004-12271093)
chr7 (182-212)||(19494450-19494480)
chr7 (182-216)||(22189974-22190008)
chr7 (61-151)||(32212966-32213056)
chr7 (71-132)||(20954798-20954859)
chr7 (64-137)||(25428472-25428545)
chr7 (63-132)||(27888400-27888469)
chr7 (85-154)||(32055593-32055662)
chr7 (110-159)||(32828760-32828809)
chr7 (105-137)||(17354561-17354593)
chr7 (85-133)||(26190021-26190069)
[»] chr3 (50 HSPs)
chr3 (64-216)||(37600162-37600314)
chr3 (85-216)||(54140925-54141056)
chr3 (65-216)||(10769757-10769908)
chr3 (65-212)||(27243042-27243189)
chr3 (67-213)||(38928044-38928190)
chr3 (85-213)||(24748945-24749073)
chr3 (85-204)||(46237090-46237209)
chr3 (98-213)||(357790-357905)
chr3 (85-206)||(50661564-50661685)
chr3 (88-204)||(43657040-43657156)
chr3 (65-212)||(37776740-37776886)
chr3 (65-166)||(21232604-21232705)
chr3 (65-212)||(28529250-28529394)
chr3 (64-212)||(46575944-46576092)
chr3 (64-202)||(13809078-13809215)
chr3 (86-176)||(20791314-20791404)
chr3 (57-212)||(46450056-46450209)
chr3 (145-209)||(29775179-29775243)
chr3 (87-176)||(14236038-14236127)
chr3 (63-212)||(20493482-20493630)
chr3 (64-176)||(46160945-46161055)
chr3 (86-176)||(26310518-26310608)
chr3 (64-212)||(24734701-24734848)
chr3 (65-176)||(5452132-5452243)
chr3 (65-212)||(41451932-41452078)
chr3 (106-212)||(18427187-18427292)
chr3 (86-144)||(45515599-45515657)
chr3 (64-176)||(52124028-52124140)
chr3 (65-176)||(55452087-55452196)
chr3 (106-213)||(37926569-37926676)
chr3 (65-175)||(49720075-49720185)
chr3 (68-137)||(38928006-38928075)
chr3 (65-137)||(37600124-37600196)
chr3 (65-137)||(54140887-54140959)
chr3 (85-137)||(357874-357924)
chr3 (65-133)||(29775136-29775202)
chr3 (62-163)||(52951370-52951471)
chr3 (92-176)||(3313985-3314069)
chr3 (85-137)||(24748924-24748976)
chr3 (86-166)||(40715944-40716024)
chr3 (86-212)||(10948597-10948722)
chr3 (182-216)||(28529288-28529322)
chr3 (182-216)||(37600241-37600275)
chr3 (143-213)||(42780708-42780778)
chr3 (143-213)||(46156696-46156766)
chr3 (182-216)||(54141004-54141038)
chr3 (64-157)||(7640686-7640779)
chr3 (65-137)||(10769719-10769791)
chr3 (116-176)||(19345072-19345132)
chr3 (65-133)||(52951475-52951543)
[»] chr8 (54 HSPs)
chr8 (85-216)||(35689497-35689628)
chr8 (64-213)||(7599457-7599606)
chr8 (70-216)||(1205829-1205975)
chr8 (65-216)||(33417680-33417830)
chr8 (96-204)||(28211930-28212038)
chr8 (85-189)||(43026310-43026412)
chr8 (63-213)||(6387558-6387706)
chr8 (87-213)||(13407359-13407485)
chr8 (64-212)||(1977210-1977357)
chr8 (124-216)||(34303470-34303562)
chr8 (86-176)||(23685149-23685239)
chr8 (87-204)||(23142859-23142984)
chr8 (86-176)||(9952829-9952919)
chr8 (86-176)||(32072115-32072205)
chr8 (64-173)||(34861262-34861369)
chr8 (86-173)||(28413944-28414031)
chr8 (87-176)||(8903871-8903960)
chr8 (127-212)||(25915088-25915175)
chr8 (143-210)||(12212163-12212230)
chr8 (143-210)||(12456591-12456658)
chr8 (65-136)||(35689595-35689666)
chr8 (93-176)||(45246459-45246542)
chr8 (86-176)||(31301133-31301223)
chr8 (66-175)||(5979878-5979987)
chr8 (64-209)||(8914767-8914911)
chr8 (92-212)||(17499270-17499389)
chr8 (140-211)||(902410-902481)
chr8 (65-175)||(45524949-45525059)
chr8 (64-212)||(43506534-43506678)
chr8 (64-176)||(16983390-16983502)
chr8 (117-213)||(35188401-35188497)
chr8 (87-137)||(1205941-1205991)
chr8 (106-204)||(10197762-10197860)
chr8 (107-176)||(11962753-11962822)
chr8 (63-171)||(45218594-45218700)
chr8 (92-176)||(17741599-17741683)
chr8 (127-166)||(9192060-9192099)
chr8 (117-192)||(11310422-11310497)
chr8 (65-136)||(13407318-13407389)
chr8 (57-132)||(24683690-24683765)
chr8 (106-176)||(17716889-17716959)
chr8 (63-136)||(23142810-23142880)
chr8 (117-175)||(28485454-28485512)
chr8 (143-212)||(31703823-31703892)
chr8 (182-216)||(34861298-34861332)
chr8 (97-147)||(39023459-39023509)
chr8 (87-136)||(25915146-25915195)
chr8 (92-137)||(33417796-33417841)
chr8 (87-176)||(35797414-35797503)
chr8 (180-213)||(44709309-44709342)
chr8 (108-136)||(902410-902438)
chr8 (182-214)||(31301152-31301184)
chr8 (64-132)||(38091469-38091537)
chr8 (93-137)||(44709296-44709340)
[»] chr4 (54 HSPs)
chr4 (64-216)||(42862453-42862605)
chr4 (85-211)||(16178601-16178726)
chr4 (85-213)||(13069958-13070085)
chr4 (65-215)||(44832460-44832610)
chr4 (69-216)||(37315564-37315708)
chr4 (85-216)||(30866964-30867095)
chr4 (66-216)||(47237773-47237923)
chr4 (63-215)||(40812032-40812184)
chr4 (104-216)||(51206079-51206191)
chr4 (64-216)||(39016659-39016811)
chr4 (95-213)||(2088700-2088818)
chr4 (85-213)||(2187849-2187976)
chr4 (93-212)||(25719149-25719268)
chr4 (59-137)||(44832577-44832655)
chr4 (107-208)||(41278658-41278759)
chr4 (86-212)||(43771144-43771269)
chr4 (65-176)||(20225413-20225522)
chr4 (92-212)||(722181-722300)
chr4 (69-176)||(8108957-8109064)
chr4 (86-175)||(34129473-34129562)
chr4 (117-212)||(19447180-19447275)
chr4 (66-137)||(51206157-51206228)
chr4 (60-134)||(42862410-42862484)
chr4 (86-176)||(50164413-50164503)
chr4 (85-178)||(21776915-21777008)
chr4 (140-213)||(49738959-49739032)
chr4 (86-170)||(22592322-22592406)
chr4 (64-176)||(24834574-24834686)
chr4 (94-209)||(51475188-51475303)
chr4 (86-212)||(754617-754742)
chr4 (86-176)||(49242188-49242278)
chr4 (86-176)||(50571882-50571972)
chr4 (86-171)||(50879474-50879559)
chr4 (104-176)||(49682863-49682935)
chr4 (69-136)||(30866930-30866997)
chr4 (65-212)||(39471154-39471300)
chr4 (182-216)||(8108991-8109025)
chr4 (64-146)||(40991691-40991773)
chr4 (86-167)||(29699507-29699588)
chr4 (68-137)||(37315674-37315743)
chr4 (64-137)||(39016777-39016850)
chr4 (107-176)||(52671869-52671938)
chr4 (132-192)||(5545642-5545702)
chr4 (86-213)||(20454558-20454682)
chr4 (115-210)||(19484532-19484626)
chr4 (185-216)||(40812072-40812103)
chr4 (111-153)||(15626358-15626400)
chr4 (106-208)||(24938456-24938557)
chr4 (69-175)||(27654478-27654584)
chr4 (182-216)||(42862532-42862566)
chr4 (98-159)||(38636367-38636428)
chr4 (116-176)||(4138913-4138973)
chr4 (65-137)||(13070054-13070126)
chr4 (52-176)||(49077233-49077357)
[»] scaffold0099 (1 HSPs)
scaffold0099 (115-216)||(27360-27463)
[»] scaffold0054 (2 HSPs)
scaffold0054 (104-216)||(30945-31057)
scaffold0054 (64-137)||(30906-30979)
[»] scaffold0543 (1 HSPs)
scaffold0543 (92-176)||(9688-9772)
[»] scaffold0492 (1 HSPs)
scaffold0492 (92-176)||(11234-11318)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-212)||(27848-27955)
[»] scaffold0147 (1 HSPs)
scaffold0147 (106-209)||(28334-28437)
[»] scaffold0155 (1 HSPs)
scaffold0155 (106-165)||(35632-35691)
[»] scaffold0190 (1 HSPs)
scaffold0190 (92-174)||(2409-2491)
[»] scaffold0005 (1 HSPs)
scaffold0005 (69-175)||(296837-296943)


Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14094248 - 14094036
Alignment:
Q  1 cattttgtatggttagattagagcattcctcccaagtttaccatggtctatatgtatttaattagaggaatgctagcgactctatcttttgaacactctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  14094248 cattttgtatggttagattagagcattcctcccaagtttaccatggtctatatgtatttgattagaggaatgctagcgacattatcttttgaacactctc 14094149  T
Q  101 tccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaat 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  14094148 tccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcactcaat 14094049  T
Q  201 aaaagagtgagtg 213  Q
     ||| ||||||||    
T  14094048 caaaaagtgagtg 14094036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 11135736 - 11135887
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || || |||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11135835  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11135836 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgcta 11135887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 11430438 - 11430588
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | || || |||||||| |||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11430537  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  11430538 ttccaaagtgtaggtcctacattgaattca-ccaataaaagagtgagtgcta 11430588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 41917995 - 41918142
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || || |||||||| ||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  168 caaagtgtatgtcctacattgatttcacccaataaaagagtgagtgct 215  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  41918095 caaagtgtaggtcctacattgattttacccaataaaagagtgagtgct 41918142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 32848766 - 32848615
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | || || |||||||||||||||||| |||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccat 32848667  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    || ||||||||| |||||||||||| |||| ||||||||||||| |||||||    
T  32848666 tttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgcta 32848615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 41095788 - 41095641
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || || |||||||| ||||||||| ||||||||||  ||||||||||||||||||||||| ||||| |||| | |||||||||||||| |    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttc 41095689  T
Q  169 aaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||    
T  41095688 aaagtgtaggtcctacattgatttcacccaataaataagtgagtgcta 41095641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 24436608 - 24436502
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||    
T  24436608 actcacttttttatctgatgaaatcaatgtatatcccaccactttatgtgggttctattttcaaagtgtgggtcctacattgatttcacccaataaaaga 24436509  T
Q  207 gtgagtg 213  Q
    | |||||    
T  24436508 gggagtg 24436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 28109883 - 28110011
Alignment:
Q  83 tatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcct 182  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||| |||||||||  ||||    
T  28109883 tatcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccattt-caaagtgtagatcct 28109981  T
Q  183 acattgatttcacccaataaaagagtgagt 212  Q
    | | |||||||| ||||||||| |||||||    
T  28109982 agaatgatttcatccaataaaaaagtgagt 28110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 44739114 - 44739242
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    ||||||||| |||| || || |||||||||||||||||| |||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||| |||  |    
T  44739114 agaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgta 44739213  T
Q  164 tttccaaagtgtatgtcctacattgattt 192  Q
    ||||||||||||| |||||||||| ||||    
T  44739214 tttccaaagtgtaggtcctacattaattt 44739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 13388483 - 13388372
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttat--gtgggttccatttccaaagtgtatgtcctacattgatttcacccaata 201  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||||  ||||||| ||||| ||||||||| || |||||||||||||| ||||||    
T  13388483 agcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaata 13388384  T
Q  202 aaagagtgagtg 213  Q
    ||| ||||||||    
T  13388383 aaaaagtgagtg 13388372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 50773263 - 50773143
Alignment:
Q  96 ctctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcac 195  Q
    ||||||| | |||||||| ||||||||| | |||||||| ||| | |||||||||||||||||||||||||||||| | || |||||||||| |||| ||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccatttccaaaatataggtcctacattaattttac 50773164  T
Q  196 ccaataaaagagtgagtgcta 216  Q
    ||||||||||| |||||||||    
T  50773163 ccaataaaagaatgagtgcta 50773143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 13114854 - 13114705
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| |||||||||||| || ||||||| |||||||||| | |||||||| ||||||| | | |||||||| ||| |||||||||||||| ||| |||||    
T  13114854 agagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattcca 13114755  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||| |||||  || |||||||||| ||||||| | | ||||||||    
T  13114754 tttccaaaatgtataacccacattgatttaacccaatgagatagtgagtg 13114705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 29418522 - 29418617
Alignment:
Q  109 tcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaa 204  Q
    ||||| ||||||||| | |||| |||||||||| |||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  29418522 tcactcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataaaa 29418617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 50425019 - 50424904
Alignment:
Q  95 actctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttca 194  Q
    |||||||| | |||||||| ||||||||| | ||||||||  ||| |||||||||||||||  ||||||||||||||||||||| || |||||||||| |    
T  50425019 actctctctaacactcactcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccacattgatttaa 50424920  T
Q  195 cccaataaaagagtga 210  Q
    |||||||||| |||||    
T  50424919 cccaataaaaaagtga 50424904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 4578752 - 4578625
Alignment:
Q  71 tgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatg-tgggttccatttcca 169  Q
    ||||||| || || |||||| ||||||||||  | |||||||| |||||||||||||||||||||||  |||||||||||||||  |||| |||||||||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtcccaccactttatgcggggtcccatttcca 4578655  T
Q  170 aagtgtatgtcctacattgatttcacccaa 199  Q
    ||||||| | || |||||||||||||||||    
T  4578654 aagtgtaggacccacattgatttcacccaa 4578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 22540386 - 22540476
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  22540386 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgta 22540476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 43832299 - 43832417
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcaccc 197  Q
    ||||| |||||||| | |||||||| || | |||||| |||||| ||  |||||||||||||| |||||||||||||||  ||||||||||||||| ||     
T  43832299 ctctctagcactcaatattttattgagtaagatcaatatatatctcattactttatgtgggtttcatttccaaagtgtagatcctacattgatttcgccg 43832398  T
Q  198 aataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||    
T  43832399 aataaaagagtgaatgcta 43832417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 9165295 - 9165400
Alignment:
Q  61 attagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggtt 160  Q
    ||||||||||||||| | || || |||||||| |||||| ||  ||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||    
T  9165295 attagaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtatgtcctaccactttatgtgagtt 9165394  T
Q  161 ccattt 166  Q
     |||||    
T  9165395 tcattt 9165400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 15523228 - 15523318
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| ||||| ||||||||    
T  15523228 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15523318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 15531222 - 15531312
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| ||||| ||||||||    
T  15531222 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15531312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 19101763 - 19101673
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| |||| |||||||||    
T  19101763 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgta 19101673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 41095601 - 41095675
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||||| || || |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  41095601 tagaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 15660931 - 15661036
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    |||||||| ||||||||| | ||||||||| || ||||||||||||||| |||||  ||||||||| |||||| |  |||||||||| ||||||||| ||    
T  15660931 cactcactcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatgac--acattgatttaacccaataatag 15661028  T
Q  206 agtgagtg 213  Q
    ||||||||    
T  15661029 agtgagtg 15661036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 18157039 - 18157145
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    |||||||| ||| || |||||| ||||||||||| | ||| |||||||||||||| |||||| ||||||| ||||||||||||| ||||    |||||||    
T  18157039 aatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccactttaagtggaacacatttcc 18157138  T
Q  169 aaagtgt 175  Q
    |||||||    
T  18157139 aaagtgt 18157145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 28941839 - 28941920
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||||| | ||||| ||||||||  |||||||||||||||||    
T  28941839 tcttttgaacactctctccaatactcatttttttattggatgaaattattgtatgtcccaccatattatgtgggttccattt 28941920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 43851218 - 43851117
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||| |||| || || |||||| | | | ||||| || |||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  43851218 gaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttccat 43851119  T
Q  165 tt 166  Q
    ||    
T  43851118 tt 43851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 6133811 - 6133699
Alignment:
Q  61 attagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggtt 160  Q
    ||||||||||||||||| || ||  ||||| |||| |||||| |||||||||  ||||||||| |||||||||| ||| ||||||||  || ||||||||    
T  6133811 attagaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggtt 6133712  T
Q  161 ccatttccaaagt 173  Q
    | |||| ||||||    
T  6133711 caattttcaaagt 6133699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 13388331 - 13388403
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || ||||||||| |||||||| | |||||||||||||||||| |||||||||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 2225254 - 2225332
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||| |||| ||||||||| |||||||||||||| |||||||||||| |||||||||  ||| |||||||||    
T  2225254 ctctctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgta 2225332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 41958113 - 41958226
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcaccc 197  Q
    ||||| ||||||||||  |||||||| |||||||||||||| |||||||| ||| || |||||| |||| ||||||||| | || ||| |||||| | ||    
T  41958113 ctctcaagcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgta-gacccacagtgatttaaacc 41958211  T
Q  198 aataaaagagtgagt 212  Q
    ||||| |||||||||    
T  41958212 aataagagagtgagt 41958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 50308888 - 50308822
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||| ||| |||| |||||||    
T  50308888 actcacttttttattgggtgaaatcaatatatgtcccaccattttatgtgagtttcattaccaaagt 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 11135925 - 11135853
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||| |||||||| || || ||||||||  |||||||| |||||||||| |||||||||||||||||||||||    
T  11135925 gagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 24911483 - 24911568
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    ||||||||||||||||  |||||||| | ||||||| | ||||||| |||||| |||||||||||| ||||||||  |||||||||||    
T  24911483 cttttgaacactctct--agcactcattcttttattcgatgaaatccatgtatgtcccaccactttttgtgggttttatttccaaagt 24911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 32211940 - 32211866
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||| ||| || ||||| |||| |||| ||||    
T  32211940 aacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaattt 32211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 11430627 - 11430555
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||| || || |||||||| ||||||||| |||||||||| ||||||| |||||| ||||||||    
T  11430627 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttatt-ggtgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 28218209 - 28218120
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||| ||||||  |||| ||||| ||||||||| |||||||||||||| || ||||||||| ||||| ||| |||| |||||||||    
T  28218209 ttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgta 28218120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 37553110 - 37553021
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||||||||||| |||||| ||||| ||||||| |||||| ||||| | ||||| ||||||  |||||||  |||| |||||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgta 37553021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 50539162 - 50539222
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    |||||||| ||||||||| ||||||||| |||| | |||||||||||||||||||| ||||    
T  50539162 cactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattt 50539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 25543336 - 25543423
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||||||||||| || ||  ||||| ||||||||||| | |||| ||| ||||||| | |||||||||| ||| ||||||||||||    
T  25543336 agaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccacttt 25543423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 5848086 - 5848164
Alignment:
Q  109 tcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacatt 187  Q
    ||||| |||||| ||||||||| ||||||| || ||| | ||||||||||||||||||  |||||||| || |||||||    
T  5848086 tcactcttttatggggtgaaattaatgtatgtctcactattttatgtgggttccatttttaaagtgtaggttctacatt 5848164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 11430510 - 11430476
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  11430510 tacattgatttcacccaataaaagagtgagtgcta 11430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 26980445 - 26980339
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | || ||  ||||| ||||||||||| |  ||||||| | ||||||| |||||||||||||| |||||||| ||| |||| |||| ||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaat 26980346  T
Q  165 ttccaaa 171  Q
    || ||||    
T  26980345 tttcaaa 26980339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 29418669 - 29418595
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcactttttt-attgggtgaaatcaatgta 137  Q
    |||||||||||||| ||  | |||||||| ||||||||  | ||||||||||||| |||||||||||||||||||    
T  29418669 agaggaatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgta 29418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 30679032 - 30678947
Alignment:
Q  127 aaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||| |||||||||||| ||||||||| |||| ||||||||| | |  ||| |||||| | ||||||| ||||||||||    
T  30679032 aaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgta-gactcacaatgatttaagccaataagagagtgagtg 30678947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 36566934 - 36567004
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||| ||||||||| |||||||||||||| || || |||||||| ||||||| |||| |||||||||    
T  36566934 cacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgta 36567004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 39019571 - 39019650
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccact 149  Q
    |||||||||||||| || || |||||| ||||||||||| | |||||      |||||||||||||||||||||| ||||||||||    
T  39019571 agaggaatgctagcaacactctcttttcaacactctctcaaacactc------ttattgggtgaaatcaatgtatgtcccaccact 39019650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 41918064 - 41918030
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  41918064 tacattgatttcacccaataaaagagtgagtgcta 41918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 41948287 - 41948182
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||| ||||||||| | |||||||||||||| | |||||||| ||| ||||| |||| |||||||||  ||| ||| |||||| |  |||||| |||    
T  41948287 actcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatcc-acaatgatttaaatcaataagaga 41948189  T
Q  207 gtgagtg 213  Q
    |||||||    
T  41948188 gtgagtg 41948182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 44271936 - 44272026
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||  |||||| ||| ||||||||  |||||||||||||| | |||||| ||| ||| ||||| |||| |||||||||    
T  44271936 cttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgta 44272026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 50773103 - 50773177
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||| ||||||||| |  || |||||||||||||||||| |||||||| | ||||||||||| |||| ||||||    
T  50773103 tagagaaatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgta 50773177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 4578686 - 4578719
Alignment:
Q  180 cctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||||||||||||||||||||||||||||    
T  4578686 cctacattgatttcacccaataaaagagtgagtg 4578719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 13388450 - 13388483
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgct 215  Q
    ||||||||||||||||||||||||||||||||||    
T  13388450 tacattgatttcacccaataaaagagtgagtgct 13388483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 14341084 - 14340999
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaa 170  Q
    |||||| ||||||||||| | |||||| ||||||||||| |||||  ||| ||| ||||||||||||| ||||   ||||||||||    
T  14341084 tcttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccactttaagtggaacccatttccaa 14340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 21977179 - 21977332
Alignment:
Q  60 aattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggt 159  Q
    |||||||| |||||||| |||  | |||||| ||||||||||| |  ||||||||| ||||| | |||||  ||||||| |||||| |||||| ||||      
T  21977179 aattagagtaatgctagggacattctcttttcaacactctctctaaaactcactttcttatttgatgaaactaatgtatgtcccactactttaagtggaa 21977278  T
Q  160 tccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
     |||||||||| ||||  | ||||  ||||||| | ||||||| | ||||||||    
T  21977279 cccatttccaatgtgtgagacctatcttgatttaaaccaataataaagtgagtg 21977332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 33193089 - 33193158
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||| |||||||| |||||||||||||| | |||||| ||| || |||||| |||| |||||||||    
T  33193089 actcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgta 33193158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 3872813 - 3872706
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || ||  ||||| ||||||||||| |||||||||| || ||||   | |||||||| ||| || ||||||||| ||| ||||| |||||    
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttc 3872715  T
Q  168 caaagtgta 176  Q
    |||||||||    
T  3872714 caaagtgta 3872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 8741362 - 8741298
Alignment:
Q  109 tcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    ||||||||||||||| |||||||||||||| || ||| | ||| ||||||||| |||| ||||||    
T  8741362 tcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagt 8741298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 9165371 - 9165339
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgc 214  Q
    |||||||||||||||||||||||||||||||||    
T  9165371 tacattgatttcacccaataaaagagtgagtgc 9165339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 14093995 - 14094067
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||| |||| || || ||||||||||||||| |  | |||||||||||| |||| ||||||||||||||    
T  14093995 gaggaatgttagcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgta 14094067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 15928575 - 15928698
Alignment:
Q  88 tttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacatt 187  Q
    ||||||||||||||| ||||| |||| ||||||| | || |||  |||||| || ||||| ||| |||| |||| |||| ||| ||||| | | |||| |    
T  15928575 tttgaacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgta-gacttacagt 15928673  T
Q  188 gatttcacccaataaaagagtgagt 212  Q
    ||||| | |||||||||||||||||    
T  15928674 gatttaaaccaataaaagagtgagt 15928698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 10659931 - 10659840
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattggg-tgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| || |||||||| | |||||||||||||  |||| ||||||||||| || ||| |||||||| ||| ||||| |||| |||||||||    
T  10659931 cttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgta 10659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 43275801 - 43275916
Alignment:
Q  94 cactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttc 193  Q
    ||||||||||| ||||||||||||||||| |||||||  ||||   || ||| | |||||||||| |||||||| ||| | |    || |||| |||| |    
T  43275801 cactctctccaacactcacttttttattgagtgaaattcatgtgggtctcacgattttatgtgggatccatttcgaaaatctggtacccacatggattcc 43275900  T
Q  194 acccaataaaagagtg 209  Q
    ||||||||||||||||    
T  43275901 acccaataaaagagtg 43275916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 11135808 - 11135774
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  11135808 tacattgatttcacccaataaaatagtgagtgcta 11135774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 32848694 - 32848728
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| ||||||||||||||||||||||||||||||    
T  32848694 tacaatgatttcacccaataaaagagtgagtgcta 32848728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 41095720 - 41095754
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||| ||||||||||||    
T  41095720 tacattgatttcacccaataaatgagtgagtgcta 41095754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 46335112 - 46335180
Alignment:
Q  86 cttttgaacactctctccagcactcac---ttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||||||||||| || |||||||||   | ||||||||| |||||||||| ||||||| ||||||||    
T  46335112 cttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccacttt 46335180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 50308772 - 50308822
Alignment:
Q  83 tatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    |||||||| | || |||||| |||||||||| |||||||||||||||||||    
T  50308772 tatcttttaagcattctctctagcactcactcttttattgggtgaaatcaa 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 50308822 - 50308792
Alignment:
Q  186 ttgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||    
T  50308822 ttgatttcacccaataaaagagtgagtgcta 50308792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 14094112 - 14094145
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgct 215  Q
    ||||||||||||||||||||||| ||||||||||    
T  14094112 tacattgatttcacccaataaaaaagtgagtgct 14094145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 14562604 - 14562669
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagt 208  Q
    |||||||||||||||| ||||||||||||||||    |||||||  ||||||| |||||| |||||    
T  14562604 caccactttatgtgggatccatttccaaagtgtggtacctacataaatttcactcaataagagagt 14562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 13889332 - 13889292
Alignment:
Q  62 ttagaggaatgctagcgactctatcttttgaacactctctc 102  Q
    |||||||||||||||| || || ||||||||||||||||||    
T  13889332 ttagaggaatgctagcaacactctcttttgaacactctctc 13889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 28109935 - 28109903
Alignment:
Q  184 cattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||||| |||||||||||    
T  28109935 cattgatttcacccaataaaaaagtgagtgcta 28109903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 29673499 - 29673583
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||| | |||||| | ||||||||| | |||||||| ||| |||||||| ||| ||| | ||| |||| |||||||||    
T  29673499 aacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgta 29673583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 39039542 - 39039470
Alignment:
Q  61 attagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    |||| |||||||||||| || ||  ||||| |||||||| |  |||||||||| ||||||||| |||||||||    
T  39039542 attaaaggaatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 43832435 - 43832383
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||||| || |||| ||||| ||||||| || ||||||||||||    
T  43832435 tcttttgaacactctttctagcattcactcttttattcggcgaaatcaatgta 43832383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 42224774 - 42224624
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || || |||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42224675  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgct 215  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42224674 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgct 42224624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 24915091 - 24915203
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    ||||||| || ||||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24915091 agcactcgctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaa 24915190  T
Q  204 agagtgagtgcta 216  Q
    |||||||||||||    
T  24915191 agagtgagtgcta 24915203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 24990924 - 24991034
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    ||||| || |||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24990924 cactcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaag 24991023  T
Q  206 agtgagtgcta 216  Q
    |||||||||||    
T  24991024 agtgagtgcta 24991034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 40971636 - 40971488
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | || || |||||||| ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||||||  ||| |||    
T  40971636 gaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttcat 40971537  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  40971536 ttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtg 40971488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 4959274 - 4959426
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || || |||||||| ||||||||| |  || |||| |||||||||||||||||||||||| || || || |||||||||||| ||    
T  4959274 agaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttaca 4959373  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||| ||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  4959374 ttttcaaagtgtaggtgatacattgatttcccccaataaaagagtgagtgcta 4959426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 13456346 - 13456197
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||||||||  | || |||||||| ||||||||  |  ||||||| |||||| || |||||||||||||| |||||||| ||||||||||||||||    
T  13456346 gaggaatgctagcagcactttcttttgagcactctct--attactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccat 13456249  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    || ||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  13456248 tttcaaagtgtaggacctacattgatttcacctaataaaagagtgagtgcta 13456197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 17568866 - 17568734
Alignment:
Q  84 atcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtccta 183  Q
    |||||||||  |||||| | |||||||||| |||||||| ||||||||||| ||| ||||||||||||| || ||||| |||||||||||||| ||||||    
T  17568866 atcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtccta 17568767  T
Q  184 cattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| |||||| |||||||||||||| ||||||    
T  17568766 cattaatttcatccaataaaagagtgggtgcta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 8912511 - 8912655
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || || |||||| |||||| | || |||||||||| ||||||| ||| |||| ||| ||| |||| ||||||| |||||||| |||||||    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttcc 8912610  T
Q  169 aaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  8912611 aaagtgtatgtcatatattgatttcacctaataaaagagtgagtg 8912655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 26072120 - 26072251
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| |||||| || |  ||||| | |||| ||||||||||||||||||| || |||||||||||||||  | ||||||||||||||| |||| ||    
T  26072120 tcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtctcaccactttatgtggaattcatttccaaagtgtaggtcccac 26072219  T
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    |||| |||||||||||||||||||||||||||    
T  26072220 attgttttcacccaataaaagagtgagtgcta 26072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 6263900 - 6264029
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||| | ||||||||  |||||||||| |||||||| ||| |||||||||||||  ||||||||| |||||||||||   || |||    
T  6263900 tcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccacttta--tgggttccagttccaaagtgttgatcttac 6263997  T
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||| |||||||||||||||||    
T  6263998 attgatttcacccactaaaagagtgagtgcta 6264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 32050331 - 32050455
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatt 191  Q
    ||||||||||| |||| ||| | |||||||||||||||| ||| ||| || || ||||||||||||||||||||| ||||||||    | ||||||||||    
T  32050331 aacactctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgtggaacatacattgatt 32050430  T
Q  192 tcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||    
T  32050431 tcacccaataaaaaagtgagtgcta 32050455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 31542427 - 31542284
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| ||||||||| |  ||||||||||| ||||||||| | |||||| || ||||||||||||||| ||||||  ||||| |||||||||||| |||||    
T  31542427 agagaaatgctagcaaaactatcttttgagcactctctctaacactcatttatttattgggtgaaattaatgtacgtcccatcactttatgtggattcca 31542328  T
Q  164 -tttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
     |||| ||| |||  |||||||| ||||||||||||||||||||    
T  31542327 ttttctaaaatgtgggtcctacagtgatttcacccaataaaaga 31542284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 34818222 - 34818331
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    |||||||||| |||||||  || |||||||||||| |  |||| |||||||||||||||||||| ||||| || ||||||||||||||| ||| ||||||    
T  34818222 agcactcactcttttattaagtaaaatcaatgtatgtgtcaccgctttatgtgggttccatttctaaagtataggtcctacattgattttaccaaataaa 34818321  T
Q  204 agagtgagtg 213  Q
    | ||||||||    
T  34818322 aaagtgagtg 34818331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 42224578 - 42224657
Alignment:
Q  58 ttaattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||| |||||||||||||| || || ||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  42224578 ttaataagaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 27592614 - 27592524
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| || |||||||||||| | |||| ||||||||||||||    
T  27592614 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgta 27592524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 30326036 - 30325946
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| || |||||||||||| | |||| || |||||||||||    
T  30326036 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgta 30325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 32050490 - 32050420
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtat 138  Q
    |||||||||| || || |||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtat 32050420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 5413878 - 5413809
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||| |||| |||||||||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgta 5413809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 10142120 - 10142048
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||||| ||||||||| | |||||||||||| |||||||||||| ||| |||||||||| |||||||||    
T  10142120 agcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgta 10142048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 32401136 - 32401215
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    |||| ||||||||||| | |||| ||| | |||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  32401136 ttttcaacactctctcaaacacttactctcttattgagtgaaattaatgtatattccaccactttatgtgggttccattt 32401215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 28490906 - 28490794
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| ||  |  ||||| || |||||||| |||| ||||||||||||||| ||||||||| |||| |||||||||||| |||  |||| |    
T  28490906 agaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaa 28490807  T
Q  164 tttccaaagtgta 176  Q
    |||  ||||||||    
T  28490806 ttttgaaagtgta 28490794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 26072289 - 26072218
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    ||||||||||||| || || |||||||| || |||||| |||||||||| ||||||||||||||| ||||||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 4959444 - 4959391
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtat 138  Q
    |||||||| ||||||||| |||||||||| |||||||||| |||||||||||||    
T  4959444 tcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 10253243 - 10253161
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcca 169  Q
    ||||||||| |||||||  | |||||||| || |||||| |||||| ||||||| ||||||||||||||||| |||| |||||||    
T  10253243 tcttttgaatactctct--aacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctatttcca 10253161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 27726902 - 27726833
Alignment:
Q  144 accactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||  |||||  |||||||||||||||| | || ||||| |||||||||||||||||||||||||    
T  27726902 accactttgagtgggacccatttccaaagtgtaggacccacattaatttcacccaataaaagagtgagtg 27726833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 34368357 - 34368500
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||   ||||||||||| |||| | |||||||| ||| ||||| | ||| |||||||| | |||||||||| |||||||||  |    
T  34368357 gaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatt 34368456  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtg 209  Q
    || ||||||||| | || ||| |||||| | ||||||| ||||||    
T  34368457 tttcaaagtgta-gacccacaatgatttaaaccaataagagagtg 34368500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 40971447 - 40971519
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||| ||||||| || || ||||||||||||||| || | |||||||| ||||||||||| |||||||||||    
T  40971447 gaggagtgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgta 40971519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 17537264 - 17537174
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| | |||||||| ||||||| | | |||||||||||| |||||||| ||| ||| ||||  |||| |||||||||    
T  17537264 cttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgta 17537174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 24915240 - 24915169
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||| ||||| || || |||||| | ||||||||  |||||||||| |||||||||||||||||||||||    
T  24915240 agaggaatactagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgta 24915169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 24991071 - 24991000
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||| ||||| || || |||||| | ||||||||  |||||||||| |||||||||||||||||||||||    
T  24991071 agaggaatactagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgta 24991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 32153766 - 32153836
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||||||| ||||||||||||||||  |  | |||| | ||||||||||||| ||||||||||    
T  32153766 caccactttatgtgggatccatttccaaagtgtgggatccacatgggtttcacccaataagagagtgagtg 32153836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 39246602 - 39246716
Alignment:
Q  62 ttagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttc 161  Q
    |||||||||||||||| ||  |  ||||||| ||  ||||| | || ||||||| ||||||| | |||||||||||| |||||||||||| |||| ||||    
T  39246602 ttagaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttc 39246701  T
Q  162 catttccaaagtgta 176  Q
      ||| |||||||||    
T  39246702 agttttcaaagtgta 39246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 32309477 - 32309562
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactt 150  Q
    |||||||||||| ||| || |||||| |||| |||||| |||||||||| | ||||||| | |||| ||||||| ||| |||||||    
T  32309477 gaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 6264067 - 6263995
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||| ||||||| || || |||||| | |||||| || |||||||||| ||||| |||||||||||||||||    
T  6264067 gaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgta 6263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 17568696 - 17568768
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || |||||||| ||||||| | ||||| |||| ||||||||| |||||| ||||||    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 25710628 - 25710544
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||  | |||||||| |||||||| ||||||||||||||| ||| |||||||  | || |||| |||| |||||||||    
T  25710628 aacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgta 25710544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 34818352 - 34818300
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||| ||||||||| | |||||||||||||||| ||| |||||||||||    
T  34818352 tcttttgagcactctctctaacactcacttttttatttggtaaaatcaatgta 34818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 10666809 - 10666770
Alignment:
Q  127 aaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  10666809 aaatcattgtatatcctaccactttatgtgggttccattt 10666770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 1649546 - 1649620
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtat 138  Q
    ||||||||| ||| ||| || |||||| ||||||||||| | |||||||| | ||||||| |||||| |||||||    
T  1649546 agaggaatgttagggacactctcttttcaacactctctctaacactcactatcttattggatgaaattaatgtat 1649620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 40971564 - 40971598
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||| ||||||||||||||||||||    
T  40971564 tacattgatttcactcaataaaagagtgagtgcta 40971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 42224702 - 42224736
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||| |||||||||||||||||||    
T  42224702 tacattgatttcacctaataaaagagtgagtgcta 42224736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 43405431 - 43405501
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||| ||||||||  |||||||||||||| || ||||||||| | |  |||| ||||||||||||||    
T  43405431 cactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgta 43405501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 25001998 - 25002067
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    |||||||||| ||| ||| || |||||| ||||||||||||| |||||||||| | ||||| | ||||||    
T  25001998 tagaggaatgatagggacactctcttttcaacactctctccaacactcactttctaattggtttaaatca 25002067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 34384833 - 34384768
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaa 171  Q
    |||||| | |||||||||||||||||||||||| |||||| | ||| |||| |||| |||| ||||    
T  34384833 cactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaa 34384768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 37455368 - 37455457
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||||||||||| ||||| ||||  |||||| | | |||||||||||| | |||||| ||| || |||||| |||| |||||||||    
T  37455368 tttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgta 37455457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 41330554 - 41330465
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||||| |  ||||  |||| ||||||| | |||||| ||||||| ||||| |||||| ||| ||||| |||| |||||||||    
T  41330554 ttttgaacactctttgtagcatccactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgta 41330465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 10142087 - 10142123
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgctata 218  Q
    ||||||||||| | |||||||||||||||||||||||    
T  10142087 tacattgattttatccaataaaagagtgagtgctata 10142123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 10299881 - 10299993
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| |||||||| ||  || |||||| |||||||||| || |||||| | | ||||||| ||||  ||||| ||  |||||||||||  |||||  |||    
T  10299881 agagaaatgctagggatactctcttttcaacactctcttcaacactcattctcttattggatgaacccaatgcatgacccaccacttttagtgggaccca 10299980  T
Q  164 tttccaaagtgta 176  Q
    |||||||||||||    
T  10299981 tttccaaagtgta 10299993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 42182875 - 42183035
Alignment:
Q  54 gtatttaattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttat 153  Q
    |||| ||| |||| |||||||||| || || |||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  42182875 gtatataaatagatgaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttat 42182974  T
Q  154 gtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgc 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  42182975 gtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagttagtgc 42183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 28898220 - 28898069
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || || | |||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  28898220 gaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcat 28898121  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  28898120 ttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgcta 28898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 1110194 - 1110340
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || || ||||| || || |||||| | |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1110194 agaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttcca 1110293  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1110294 tttccaaagtatatgtcctacattgatttcacccaataaaagagtga 1110340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 4964856 - 4964705
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| ||  | ||||||||  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||    
T  4964856 gaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcat 4964757  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    || ||||||||| ||||||||||||| | | |||||||||||||||||||||    
T  4964756 tttcaaagtgtaggtcctacattgatcttatccaataaaagagtgagtgcta 4964705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 37228499 - 37228647
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaa-tcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    ||||||||| || || |||||||| ||||||||| |||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||| |||     
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgtttt 37228598  T
Q  168 caaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  37228599 caaagtgcaggtcctacattgatttcacccaataaaaaagtgagtgcta 37228647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 31395628 - 31395477
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||| |||| || || |||||||| ||||||||  ||||||||||  ||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccat 31395529  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||| |||||| |||||||||| |||||||||||||||||| |||||||||    
T  31395528 ttccatagtgtaggtcctacatttatttcacccaataaaagattgagtgcta 31395477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 15508911 - 15509064
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||| |||| || || ||||||||||||||| || | |||||||| |||||||| ||||||||||||||| |||||||| ||| ||||||||||||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccat 15509010  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgctata 218  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| |||| ||||    
T  15509011 ttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtgatata 15509064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 24895408 - 24895302
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||| ||||| ||| | |||||||||||||| |||||| |||||||| ||||||||||||||||||||| || |||||||||| ||||||| |||||    
T  24895408 actcactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaaga 24895309  T
Q  207 gtgagtg 213  Q
    |||||||    
T  24895308 gtgagtg 24895302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 6315697 - 6315800
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||||||||| ||| |||||||||||||| | |||||||||||| | |||||||||||||||||||| |||||||||| ||||   |||||||||||    
T  6315697 actcacttttttactggatgaaatcaatgtatgttccaccactttatataggttccatttccaaagtgtaggtcctacattaattttttccaataaaaga 6315796  T
Q  207 gtga 210  Q
    ||||    
T  6315797 gtga 6315800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 37719945 - 37719869
Alignment:
Q  140 tcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  37719945 tcccaccattttaagtggattccatttctaaagtgtatgtcctacattgatttcatccaataaaagagtgagtgcta 37719869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 10339782 - 10339857
Alignment:
Q  84 atcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggt 159  Q
    ||||||||||||||||||| |||||||||| ||||||||||  ||||||||| || ||||||||||||||||||||    
T  10339782 atcttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccactttatgtgggt 10339857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 10981536 - 10981661
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||||||||||||||| | ||||||||||| |||||  |||||  ||||||| |||||||||||| ||||||||| |||||||| ||||| | || |||    
T  10981536 cttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgta-gacccaca 10981634  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||| | ||||||| |||||||||    
T  10981635 atgatttaaaccaataagagagtgagt 10981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 33747082 - 33746953
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||||||||||||  ||  |||||| ||||||||  |||||||||| ||| |||||||||||||| | ||||||||||| ||||| || || | ||    
T  33747082 tcttttgaacactctctttagacctcactcttttattga-tgaaatcaatatatgtcccaccactttatattggttccatttctaaagtataggttccac 33746984  T
Q  185 attgatttcacccaataaaagagtgagtgct 215  Q
    |||| ||||| ||||||||| ||||||||||    
T  33746983 attgttttcatccaataaaaaagtgagtgct 33746953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 1107055 - 1107123
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttat 153  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  1107055 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttat 1107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 9470100 - 9470222
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacat 186  Q
    |||| ||| ||||||| | |||||||| ||||||||| |||||||||||||| |||||||||||| | ||||||| |||| ||||||||| | || |||     
T  9470100 ttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgta-gacccacaa 9470198  T
Q  187 tgatttcacccaataaaagagtga 210  Q
    |||||| | ||||||| |||||||    
T  9470199 tgatttaaaccaataagagagtga 9470222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 26767944 - 26767798
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| |||| |||||| |||||| ||| ||||| ||| |||||||||||||| |||||||||||| || |||||| ||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaat 26767845  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    || |||| |||| | |  ||| |||||| | |||||||||||||||||    
T  26767844 tttcaaattgta-gactcacaatgatttaaaccaataaaagagtgagt 26767798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 45554567 - 45554650
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||||||| || ||  ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccacttt 45554650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 174
Target Start/End: Complemental strand, 18511392 - 18511283
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| ||||||||| | | |||||||| ||||||||| | |||||||||||| |||||| | ||||||||||||| ||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaat 18511293  T
Q  165 ttccaaagtg 174  Q
    || |||||||    
T  18511292 tttcaaagtg 18511283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 38104292 - 38104369
Alignment:
Q  112 cttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattga 189  Q
    |||||||||||| | |||||||||||| | |||||||||||| ||||||||||| |||||||||||| || |||||||    
T  38104292 cttttttattggataaaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattga 38104369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 42183075 - 42183003
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||  || || ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  42183075 gaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgta 42183003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 12989188 - 12989334
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| ||||||||||    |||||||| ||| ||||| |||||||||||||| |||||||||||| | ||| ||| ||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctat 12989287  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||| ||||||| | || ||| |||||| | ||||||| |||||||||    
T  12989288 ttccgaagtgta-gacccacaatgatttaaaccaataagagagtgagt 12989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 6980282 - 6980157
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| ||||||||||| |||||||||| ||||||||| ||||||||| |||| | | |||||||| |||| |||| |||| |||||| || | || |||    
T  6980282 cttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtata-gacccaca 6980184  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||||| | ||||| |||||||||    
T  6980183 atgatttcaactaataagagagtgagt 6980157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 8009530 - 8009611
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||||||||||||| || | ||||||||||||| |||| |||||||||  ||| || ||||||||||||||| ||||||||    
T  8009530 tcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtttccattt 8009611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 21447176 - 21447245
Alignment:
Q  140 tcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtg 209  Q
    |||||||| ||||||||||  |||||||||||||||| | || ||||||||||||| |||||||||||||    
T  21447176 tcccaccattttatgtgggacccatttccaaagtgtaagacccacattgatttcacacaataaaagagtg 21447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 37228686 - 37228613
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||| |||| | || || |||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  37228686 agaggaaggctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 44274254 - 44274378
Alignment:
Q  88 tttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacatt 187  Q
    ||||| ||||||||| | || ||||| ||| ||||| | |||||||||||| |||||||||||| ||||||||| | || |||||||||  ||| ||| |    
T  44274254 tttgagcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatcc-acaat 44274352  T
Q  188 gatttcacccaataaaagagtgagtg 213  Q
    ||||| | ||||||| ||||||||||    
T  44274353 gatttaaaccaataacagagtgagtg 44274378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 11539442 - 11539569
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatca--atgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    ||||||||||||| || |||||||||| ||||||||| ||||||||  |||||| | ||| |||||| |||| |||| |||| |||||||||  |||       
T  11539442 ttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccaga 11539541  T
Q  185 attgatttcacccaataaaagagtgagt 212  Q
    |||||||| | ||||||| |||||||||    
T  11539542 attgatttaaaccaataagagagtgagt 11539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 19427425 - 19427320
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || || |||||| ||||||||||  |||||||||| | | ||||| ||||||||||||  |  ||||||||||||||||| |||||||     
T  19427425 gaatgctagcaacactctctttttaacactctct--agcactcactctatcattggatgaaatcaatgtggactccaccactttatgtgggatccatttt 19427328  T
Q  168 caaagtgt 175  Q
    ||||||||    
T  19427327 caaagtgt 19427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 27969004 - 27968953
Alignment:
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  27969004 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgcta 27968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 28091583 - 28091634
Alignment:
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  28091583 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgcta 28091634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 28101815 - 28101866
Alignment:
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  28101815 ttccaaagtgtaggtcctacactaatttcacccaataaaagagtgagtgcta 28101866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 42579813 - 42579734
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaa 171  Q
    ||||||||||| | |||||||| ||||||||| |||||||||| |||||| || ||||||| ||||||| ||||| ||||    
T  42579813 aacactctctcaaacactcactcttttattggatgaaatcaatatatatctcatcactttacgtgggtttcattttcaaa 42579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 37719830 - 37719903
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||| ||  | |||||||| |||||| || |||||||||| ||||||||| |||||||||||||    
T  37719830 agaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 19639111 - 19639234
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| |||||||||||||||| ||||| ||||||| | |||||||||||||| || || ||| |  |||| |||| |||| ||||||| | | ||||||    
T  19639111 ctttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgca-gacctaca 19639209  T
Q  186 ttgatttcacccaataaaagagtga 210  Q
     |||||| | ||||||| |||||||    
T  19639210 atgatttaaaccaataagagagtga 19639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 19837704 - 19837827
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| |||||||||||||||| ||||| ||||||| | |||||||||||||| || || ||| |  |||| |||| |||| ||||||| | | ||||||    
T  19837704 ctttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgca-gacctaca 19837802  T
Q  186 ttgatttcacccaataaaagagtga 210  Q
     |||||| | ||||||| |||||||    
T  19837803 atgatttaaaccaataagagagtga 19837827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 20951687 - 20951639
Alignment:
Q  168 caaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  20951687 caaagtgtaggtcctacattgatttcacccaataaaagaataagtgcta 20951639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 41805961 - 41805873
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    ||||||||||||||| || || | ||||| ||||| |||  | |||||||| ||||||||| | |||||||||||| ||||||||||||    
T  41805961 tagaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 23464009 - 23463882
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| ||  | |||||| || |||||||| | || ||||| | |||||| |||||||||||||||||||| | | ||||  || ||| |||    
T  23464009 gaggaatgctagcaacattctctttttaatactctctcaaacattcactatcttattgagtgaaatcaatgtatatcccgctattttaaatgagtttcat 23463910  T
Q  165 ttccaaagtgtatgtcctacattgattt 192  Q
    || |||| |||||| || ||||||||||    
T  23463909 tttcaaattgtatgacccacattgattt 23463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 37398968 - 37398849
Alignment:
Q  94 cactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttc 193  Q
    ||||||||| |  ||||| | |||||||| ||||||||||| ||| |  ||||| ||||| || |||  |||| ||||||||| ||||||||| ||||||    
T  37398968 cactctctctaatactcaatcttttattgagtgaaatcaatatatgtttcaccattttatatgagttttattttcaaagtgtaggtcctacatggatttc 37398869  T
Q  194 acccaataaaagagtgagtg 213  Q
    | ||||||||| ||| ||||    
T  37398868 atccaataaaaaagtaagtg 37398849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 42669914 - 42669803
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    ||||||||| ||| ||| || |||||| |||||||||| || |||||| ||| ||||||| |  |||||||||||  |||||||||||| |||    |||    
T  42669914 agaggaatgttagggacgctctcttttcaacactctcttcaacactcattttcttattggatagaatcaatgtatgacccaccactttaagtgaaaccca 42669815  T
Q  164 tttccaaagtgt 175  Q
    ||||||||||||    
T  42669814 tttccaaagtgt 42669803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 8163626 - 8163556
Alignment:
Q  82 ctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttta 152  Q
    ||||||||| |||||||| | || |||||| ||||||||||| | ||||||||||||  ||||||||||||    
T  8163626 ctatctttttaacactcttttcaacactcatttttttattggataaaatcaatgtatgacccaccacttta 8163556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 20951602 - 20951673
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||| || || |||||||| ||||||||  |||||| | | |||||||||||||||||||||||    
T  20951602 agaggaatgctagcaacactctcttttgagcactctct--agcacttattcttttattgggtgaaatcaatgta 20951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 27968914 - 27968980
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaat 130  Q
    |||| ||||||||| || || ||||||||  |||||||| |||||||||| ||||||||||||||||    
T  27968914 agagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 28091673 - 28091607
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaat 130  Q
    |||| ||||||||| || || ||||||||  |||||||| |||||||||| ||||||||||||||||    
T  28091673 agagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 28101905 - 28101839
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaat 130  Q
    |||| ||||||||| || || ||||||||  |||||||| |||||||||| ||||||||||||||||    
T  28101905 agagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 28898148 - 28898182
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  28898148 tacattgatttcacccaataaaagagtgagtgcta 28898182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 34142301 - 34142211
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| |||| |||||| | || ||||||||||||||| ||||||  |||||| || ||| ||||| ||||||||| |||| |||||||||    
T  34142301 cttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgta 34142211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 42182958 - 42182924
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  42182958 tacattgatttcacccaataaaagagtgagtgcta 42182924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 17188092 - 17188153
Alignment:
Q  95 actctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtg 156  Q
    |||||||| | |||||||| ||||||||| |||||||||||| |||| ||||||||| ||||    
T  17188092 actctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtg 17188153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||| || || ||||||||  |||||||  |||||||||| ||||||||| |||||||||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 3804585 - 3804693
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatat-cccaccactttatgtgggttccatttc 167  Q
    ||||||||| || ||  ||||| ||||||||||  | || ||||| ||||||||| |||||||||||||| | |||| |||||||||| ||||  ||||     
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaatttt 3804684  T
Q  168 caaagtgta 176  Q
    |||||||||    
T  3804685 caaagtgta 3804693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 25730601 - 25730521
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    |||||||||||||| || | |||||||||||||||||| || |||  |||||| || |||||  |||||||||||| ||||    
T  25730601 cttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctattt 25730521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 32701517 - 32701557
Alignment:
Q  115 ttttattgggtgaaatcaatgtatatcccaccactttatgt 155  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  32701517 ttttattggataaaatcaatgtatatcccaccactttatgt 32701557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 36094098 - 36094023
Alignment:
Q  134 tgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    ||||| |||||  |||||||||||||| |||||||||| ||||  ||| |||||||||| | |||||||||||||||    
T  36094098 tgtatgtcccattactttatgtgggtttcatttccaaattgtaaatcc-acattgatttaaaccaataaaagagtga 36094023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 43400150 - 43400222
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgg 157  Q
    |||||| ||||||||||| | |||||||||| ||||||| |||||  | ||||| ||||||||||||| ||||    
T  43400150 tcttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccactttaagtgg 43400222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 16719609 - 16719502
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || ||  ||||| |||||| |||  |||||  ||| ||||||| | ||||||||||||||||||||||| || |||| ||||| |||| |    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttc 16719510  T
Q  169 aaagtgta 176  Q
    ||| ||||    
T  16719509 aaaatgta 16719502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 1107107 - 1107073
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||| ||||||    
T  1107107 tacattgatttcacccaataaaagagtgggtgcta 1107073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 4964784 - 4964818
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  4964784 tacattgatttcacccaataaaaaagtgagtgcta 4964818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 19193497 - 19193547
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttt 115  Q
    ||||||||||||| || || |||||| ||||||||||||| ||||||||||    
T  19193497 gaggaatgctagcaacactctcttttcaacactctctccaacactcacttt 19193547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 19953424 - 19953502
Alignment:
Q  97 tctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    ||||| || |||||| | ||||||||| ||||| ||||||||  |||||||||||| ||||   |||||||||||||||    
T  19953424 tctcttcaacactcattcttttattggatgaaaccaatgtatgacccaccactttaagtggaacccatttccaaagtgt 19953502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 31395556 - 31395590
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||| ||||||||||||    
T  31395556 tacattgatttcacccaataaaggagtgagtgcta 31395590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 38464181 - 38464271
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| |||||||||||   || | ||||||||||||  |||||||||||||| || || ||||||  |||||||| |||| |||||||||    
T  38464181 cttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgta 38464271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 41546210 - 41546105
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||||||||  | || |||||| ||||||||||| | || ||||| | ||||||| || ||||||| ||| |||| |||||||| ||| |||||||    
T  41546210 gaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccactttacgtgagttccat 41546112  T
Q  165 ttccaaa 171  Q
    || ||||    
T  41546111 tttcaaa 41546105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 45554636 - 45554602
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  45554636 tacattgatttcatccaataaaagagtgagtgcta 45554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31395466 - 31395511
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||| |||||||| | |||||||||||||||| ||||||    
T  31395466 aacactctctctagcactcaatcttttattgggtgaaataaatgta 31395511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 37398807 - 37398880
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||| || || | |||||| || |||||| | |||| ||||||||||||| ||||||| |||||    
T  37398807 agaggaatgctagcaacactcttttttgagcattctctctaacacttacttttttattggatgaaatccatgta 37398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 40535173 - 40535104
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaat 134  Q
    ||||||||||| | || |||||||| || ||| ||||| | |||||||| ||||||||||| ||||||||    
T  40535173 gaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaat 40535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 6420456 - 6420516
Alignment:
Q  72 gctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    |||||| || || |||||| ||||||||||||| |||||||||| ||||||| | ||||||    
T  6420456 gctagcaacactctcttttcaacactctctccaccactcactttcttattggcttaaatca 6420516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 20459083 - 20459031
Alignment:
Q  71 tgctagcgactctatcttttgaacactctctccagcactcacttttttattgg 123  Q
    ||||||| || || |||||| ||||||||||||| |||||||||| |||||||    
T  20459083 tgctagcaacactctcttttcaacactctctccaccactcactttcttattgg 20459031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 25238413 - 25238310
Alignment:
Q  113 ttttttattgggtgaaatcaatgtatatcccaccactt-tatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgag 211  Q
    ||||||||| | | |||||||||||| || || ||||| | ||||||||| |||| |||||||||  ||| ||| |||||| | ||||||||| ||||||    
T  25238413 ttttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatcc-acaatgatttaaaccaataaaaaagtgag 25238315  T
Q  212 tgcta 216  Q
    |||||    
T  25238314 tgcta 25238310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 27183447 - 27183395
Alignment:
Q  159 ttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgag 211  Q
    |||||||| |||||||||||  | |||||||||| ||||||||||| ||||||    
T  27183447 ttccattttcaaagtgtatgatccacattgatttaacccaataaaaaagtgag 27183395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 27832989 - 27832937
Alignment:
Q  159 ttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgag 211  Q
    |||||||| |||||||||||  | |||||||||| ||||||||||| ||||||    
T  27832989 ttccattttcaaagtgtatgatccacattgatttaacccaataaaaaagtgag 27832937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 37652389 - 37652317
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| ||||||||||| | |||||||||||||| | ||||| |||| |||  |||| |||||||| |||||    
T  37652389 agcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgta 37652317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 44674585 - 44674649
Alignment:
Q  109 tcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    ||||||| ||||||| |||||||||||||  ||  ||||||||||||||  ||||||| ||||||    
T  44674585 tcactttcttattggatgaaatcaatgtaggtcttaccactttatgtggaatccattttcaaagt 44674649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 19090399 - 19090247
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||| | || || |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19090399 agaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 19090300  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  19090299 tttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgcta 19090247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 35128900 - 35128758
Alignment:
Q  71 tgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaa 170  Q
    ||||||| || || |||||||||||||||||| |||| ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  171 agtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||| ||||||||||||||||||||||||||| | ||||||    
T  35128800 agtgtaggtcctacattgatttcacccaataaaaaaatgagtg 35128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 6531484 - 6531350
Alignment:
Q  62 ttagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttc 161  Q
    |||||||||||||||| || || ||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  6531484 ttagaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttc 6531385  T
Q  162 catttccaaagtgtatgtcctacattgatttcacc 196  Q
    ||||||| ||||||| |||||||||| ||||||||    
T  6531384 catttccgaagtgtaggtcctacattaatttcacc 6531350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 19737596 - 19737470
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacat 186  Q
    |||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  19737596 ttttgagcactctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtaggtcctacat 19737497  T
Q  187 tgatttcacccaataaaagagtgagtg 213  Q
    |||||| | ||||||||||||||||||    
T  19737496 tgatttgagccaataaaagagtgagtg 19737470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 10060855 - 10061004
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || || ||||||||||||||| |  | || ||||| |||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  10060855 agaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttcca 10060954  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||| ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  10060955 ttttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtg 10061004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 4595766 - 4595890
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatt 191  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| | |||||||||||| ||||||||| |||||||||| |||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgtaagtcctacattaatt 4595865  T
Q  192 tcacccaataaaagagtgagtgcta 216  Q
    ||||| || ||||||||||||||||    
T  4595866 tcaccaaagaaaagagtgagtgcta 4595890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 373418 - 373544
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacat 186  Q
    |||||| ||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |||||||||||| |||||||| ||||| ||| |||||||||    
T  373418 ttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccattttcaaagggtaggtcctacat 373517  T
Q  187 tgatttcacccaataaaagagtgagtg 213  Q
    |||||| | ||||||||| ||| ||||    
T  373518 tgattttatccaataaaatagtaagtg 373544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 12794977 - 12794850
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||||||||||||| | || | | || ||||||  ||||||| ||||||||||||||||||||||||| ||| ||||| |||| |||| |||||||    
T  12794977 tcttttgaacactctctctaacatttatttatttatttagtgaaattaatgtatatcccaccactttatgtgagtttcattttcaaaatgtaggtcctac 12794878  T
Q  185 attgatttcacccaataaaagagtgagt 212  Q
    ||| |||||| ||||||||||| |||||    
T  12794877 attaatttcatccaataaaagaatgagt 12794850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 21987310 - 21987400
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  21987310 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgta 21987400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 34905329 - 34905479
Alignment:
Q  61 attagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggtt 160  Q
    ||||||| ||||||||| || ||   |||| ||||||||||| | |||||||| ||||||||| |||||||||||||| |||||||||||| | ||||||    
T  34905329 attagagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggtt 34905428  T
Q  161 ccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    | |||| ||||||||| | || ||| |||||| | ||||||| |||||||||    
T  34905429 caattttcaaagtgta-gacccacaatgatttaaaccaataagagagtgagt 34905479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 445837 - 445923
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    |||| |||||| |||| |||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||| |||| ||||||    
T  445837 ttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagt 445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 6992376 - 6992304
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgct 215  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||||| || |||||||||| ||||||||    
T  6992376 caccactttatgtgagtttcatttccaaagtgtaggtcctacattgattttactcaataaaagaatgagtgct 6992304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 5106316 - 5106406
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| |||||| |||| | |||||||||||||||||| | |||||||||||| |||||||||||| |||||| || |||| |||||||||    
T  5106316 cttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgta 5106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 10133320 - 10133195
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| ||||||||||| | ||||||||  |||||||| |||||| | ||||| ||||||||||||||| |||||| |||| ||||||||| |  | |||    
T  10133320 cttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgta-gaaccaca 10133222  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||| | |||||||||||||||||    
T  10133221 atgatttaaaccaataaaagagtgagt 10133195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 9940445 - 9940393
Alignment:
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9940445 tttccaaagtgtaaatcctacattgatttcacccaataaaagagtgagtgcta 9940393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 31116286 - 31116196
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||||||||| | || ||||| || |||||| |||||||||||||| |||||| ||||| |||| |||| |||||||| |||||    
T  31116286 cttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 31116196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 19090209 - 19090281
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || |||||||| ||||||||| |||||||||| ||||||||| |||| ||||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 25326826 - 25326937
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    ||||| |||| ||| ||| || |||||| |||||||||| || |||||| ||| ||||||| | ||||||||||||  |||||||||||| ||||   ||    
T  25326826 tagagtaatgatagggacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaaccc 25326925  T
Q  163 atttccaaagtg 174  Q
    ||||||||||||    
T  25326926 atttccaaagtg 25326937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 26159361 - 26159472
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    ||||| |||| ||| ||| || |||||| |||||||||| || |||||| ||| ||||||| | ||||||||||||  |||||||||||| ||||   ||    
T  26159361 tagagtaatgatagggacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaaccc 26159460  T
Q  163 atttccaaagtg 174  Q
    ||||||||||||    
T  26159461 atttccaaagtg 26159472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 10061046 - 10060973
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||  |||| || || |||||||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  10061046 agaggaatattagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgta 10060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 12327361 - 12327283
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaa 170  Q
    ||||||||||| |||| ||||| ||||||||| |  ||||||||||| ||| |||| ||| ||||||||| ||||||||    
T  12327361 aacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgtgggttctatttccaa 12327283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 12690249 - 12690359
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||||||| ||| || | |||| ||||||||||| | ||||  || ||||||||| |||||| |||| || || |||||||||| ||||  || ||    
T  12690249 gaggaatgctagggacactctattttaaacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccactttaagtggaatctat 12690348  T
Q  165 ttccaaagtgt 175  Q
    |||||||||||    
T  12690349 ttccaaagtgt 12690359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 19737431 - 19737501
Alignment:
Q  67 ggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||| || || ||||||||||| |||||| | |||||||| ||||||||| | |||||||||||    
T  19737431 ggaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgta 19737501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 6531409 - 6531442
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgct 215  Q
    ||||||||||||||||||||||||||||||||||    
T  6531409 tacattgatttcacccaataaaagagtgagtgct 6531442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9940382 - 9940427
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||    
T  9940382 aacattctctctagcactcactcttttattgggtgaaatcaatgta 9940427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 29610421 - 29610328
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgg 157  Q
    ||||||||||||  ||| || |||||| ||||||||||| | |||||||||  ||||| | | |||| ||||||| ||||||||||||| ||||    
T  29610421 agaggaatgctaatgacactctcttttcaacactctctcaaacactcacttgcttattagtttaaatgaatgtatgtcccaccactttaagtgg 29610328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 4595811 - 4595777
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||| ||||||||||||||||||||    
T  4595811 tacattgatttcactcaataaaagagtgagtgcta 4595777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 12785077 - 12785011
Alignment:
Q  110 cacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||||||||| ||||||||||| ||  || |||||||||  |||| |||| |||||||||    
T  12785077 cacttttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgta 12785011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 19090326 - 19090360
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||| ||||||    
T  19090326 tacattgatttcacccaataaaagagtgggtgcta 19090360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 19737546 - 19737580
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||| |||||||||||||||    
T  19737546 tacattgatttcacccaattaaagagtgagtgcta 19737580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 26171046 - 26170964
Alignment:
Q  93 acactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    ||||||| | || |||||| ||| ||||||| | ||||||||||||  |||||||||||| ||||   |||||||||||||||    
T  26171046 acactcttttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaacccatttccaaagtgt 26170964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 12753943 - 12753842
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  |||||||||||||| |  |||| ||||| ||| ||||| | ||||  ||| || |||||||||||| ||||||||| ||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctat 12753844  T
Q  165 tt 166  Q
    ||    
T  12753843 tt 12753842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 12780896 - 12780831
Alignment:
Q  111 acttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||| |||| ||||||||||| || ||| ||||| ||| ||||| |||| |||||||||    
T  12780896 acttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgta 12780831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 13919781 - 13919928
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || || |||||||| ||||||||| ||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttc 13919880  T
Q  169 aaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  13919881 aaagtgtaggtcctacattgatttcacccaataaatgagtgagtgcta 13919928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 26703622 - 26703472
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||| || |||||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  26703622 agaggaatgctagcaacact--cttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttcca 26703525  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  26703524 tttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgcta 26703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 45909453 - 45909601
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcact-tttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||||| | || ||||||||||| ||||||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 45909552  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  45909553 ttccaaattgtaggtcctacattgattttacccaataaaagagtgagtg 45909601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 62 - 214
Target Start/End: Complemental strand, 17354713 - 17354561
Alignment:
Q  62 ttagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttc 161  Q
    |||||||||||||||| || || | |||||| ||||||||| | |||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17354713 ttagaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttc 17354614  T
Q  162 catttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgc 214  Q
     |||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  17354613 tatttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagtgc 17354561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 210
Target Start/End: Original strand, 22786149 - 22786293
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatt 165  Q
    |||||||||||| || || |||||||| ||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  166 tccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    ||||||||||| ||  |||||||||||||||  ||||||||||||    
T  22786249 tccaaagtgtaggttatacattgatttcacctgataaaagagtga 22786293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 25428659 - 25428511
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || || |||||||| |||||| |  || ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttc 25428560  T
Q  168 caaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||  |||||||||||||| | |||||||||||||||||||||    
T  25428559 caaagtgtagatcctacattgattttatccaataaaagagtgagtgcta 25428511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 19494521 - 19494374
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatt 165  Q
    ||||||||||||  | || ||||||||  ||| |||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  166 tccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    | |||||||||  ||||||||||||||||||||||||||  |||||||    
T  19494421 ttcaaagtgtagatcctacattgatttcacccaataaaaatgtgagtg 19494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 19841029 - 19840917
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    |||| ||||| ||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19841029 agcattcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataaa 19840930  T
Q  204 agagtgagtgcta 216  Q
    |||||||||||||    
T  19840929 agagtgagtgcta 19840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 24539307 - 24539158
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| |||||||||||| || ||||||| |||||||||| | |||||||| ||||||||| | |||||||| ||| |||||||||||||| ||| |||||    
T  24539307 agagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattcca 24539208  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||| |||||| || |||||||||| ||||||| | ||||||||||    
T  24539207 tttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtg 24539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 14759659 - 14759791
Alignment:
Q  84 atcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtccta 183  Q
    |||||||||  |||||| | |||||||||| |||||||| ||||||||||| ||| ||||||||||||| || ||||| |||||||||||||| ||||||    
T  14759659 atcttttgagtactctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtccta 14759758  T
Q  184 cattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| |||||| |||||||||||||| ||||||    
T  14759759 cattaatttcatccaataaaagagtgggtgcta 14759791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 17749690 - 17749839
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| |||||||||||| || | ||||| |||||||||| | |||||||| ||||||||| | |||||||| ||| |||||||||||||| ||| || ||    
T  17749690 agagaaatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttca 17749789  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||| |||||| || |||||||||| ||||||| | ||||||||||    
T  17749790 tttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtg 17749839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 33008101 - 33008247
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  |||||||||||| |||| |||||||||| ||||||||| |||||||| ||||| |||||||||||| ||||||||| ||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctat 33008200  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||||| ||||| | || ||| |||||| | |||||||||||| ||||    
T  33008201 ttccaatgtgta-gacccacaatgatttaaaccaataaaagagagagt 33008247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 10619574 - 10619433
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || || |||||||| ||||||||| |||||  ||| | || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  10619574 gaggaatgctagcaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaatatatatcccatcactttatgtgggttccat 10619476  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagt 208  Q
    |  ||||||||| ||   |||||||||||||| |||||||||||    
T  10619475 tgacaaagtgtaagt-taacattgatttcacctaataaaagagt 10619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 22189958 - 22190047
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||||||||||| |||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||||||| |||| |||||||||    
T  22189958 ttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgta 22190047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 26189962 - 26190048
Alignment:
Q  127 aaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||| || ||||||||| | ||||||||| ||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  26189962 aaatcaatgcatgtcccaccacctcatgtgggtttcattttcaaagtgtaggtcctacgttgattttacccaataaaagagtgagtg 26190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 21963237 - 21963172
Alignment:
Q  141 cccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21963237 cccaccattttatgtgagttccatttccaaagtgtagatcctacattgatttcacccaataaaaga 21963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 7775019 - 7775107
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    |||| ||||||||||  |||||||||| ||||||||| |||||||||||||| |||||||||||| |||| |||| |||| ||||||||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgt 7775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 42887791 - 42887673
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||  ||||||| || |||||||| |||||| |||||| ||| | ||||||||||||| ||| ||||| ||||| |||||||||||    
T  42887791 tcttttgatcactctctttagcactcgctcttttattgagtgaaaccaatgtttatactaccactttatgtgtgtttcattt-caaagagtatgtcctac 42887693  T
Q  185 attgatttcacccaataaaa 204  Q
    ||| |||||| || ||||||    
T  42887692 attaatttcatccgataaaa 42887673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 46067987 - 46068079
Alignment:
Q  117 ttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgag 211  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||||| || |||| | |  |||||||||| |||||||||||| |||||    
T  46067987 ttattggttgaaatcaatgtatgttccaccactttatgtgggttccatttccgaattgtaggac--acattgatttaacccaataaaagtgtgag 46068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 47822136 - 47822017
Alignment:
Q  94 cactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttc 193  Q
    ||||||||| | |||||||| || |||||||||||| | ||||  ||| |||||||||||||||| ||||||||||| ||||    || |||| ||||||    
T  47822136 cactctctctaacactcactcttctattgggtgaaacccatgtggatctcaccactttatgtgggatccatttccaatgtgtggtacccacatggatttc 47822037  T
Q  194 acccaataaaagagtgagtg 213  Q
    |||||||| |||||||||||    
T  47822036 acccaatataagagtgagtg 47822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 13919968 - 13919894
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||||| || || |||||||| ||||||||| ||||||||||  ||||||||||||||||||||||    
T  13919968 tagaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14795131 - 14795240
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || ||  ||||| ||||||||||| | || ||||||||||||||| |||||||||||||| |||||||| ||| ||| ||||| ||||     
T  14795131 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 14795230  T
Q  168 caaagtgtat 177  Q
     |||||||||    
T  14795231 taaagtgtat 14795240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 15242123 - 15242232
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || ||  ||||| ||||||||||| | || ||||||||||||||| |||||||||||||| |||||||| ||| ||| ||||| ||||     
T  15242123 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 15242222  T
Q  168 caaagtgtat 177  Q
     |||||||||    
T  15242223 taaagtgtat 15242232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 27888278 - 27888426
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||| ||||||||| | |||||||  | | ||||| | |||||||||||| |||||||||||| ||||||||| |    
T  27888278 agaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaa 27888377  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||  |||||||| | || ||| |||||| | ||||||| ||||||||||    
T  27888378 tttttaaagtgta-gacccacaatgatttaaaccaataagagagtgagtg 27888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 31502648 - 31502536
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||| |||| |||||| | |||||||| ||||||||| ||||||||| |||| |||||||| ||| |||| |||| |    
T  31502648 agaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaa 31502549  T
Q  164 tttccaaagtgta 176  Q
    ||| |||||||||    
T  31502548 ttttcaaagtgta 31502536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 32205075 - 32205219
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||||||||||||| |   |||||| ||||||||| |||||||||||||| ||| |||| ||| ||||||||| |    
T  32205075 agaggaatgctagcaacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaa 32205171  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||  ||||| || || ||||| |||||| | | ||||| |||||||||    
T  32205172 tttttaaagtataggt-ctacaatgatttaaactaataagagagtgagt 32205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 44511098 - 44511008
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| || || |||||| | || |||| |||| ||| |||||    
T  44511098 cttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgta 44511008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 11824090 - 11824179
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||| ||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||| ||| | ||| |||| |||||||||    
T  11824090 ttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgta 11824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 19840879 - 19840948
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaat 134  Q
    ||||||||||||| || || | |||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  19840879 gaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 26459068 - 26459137
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||| ||| ||| ||||||| |||||||    
T  26459068 caccactttatgtgggttccatttctaaagtgtaggtcccacattgtttttacctaataaaaaagtgagt 26459137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 31959933 - 31959860
Alignment:
Q  132 aatgtatatcccacc-actttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaa 204  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||    
T  31959933 aatgtatgtcccacccactttatgtgggttctatttccaaagtgtgggtcctacattaatttcactcaataaaa 31959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  67 ggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||| || || |||| ||| ||||||||| |||||||||| |||||||||||||||| ||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 2520629 - 2520698
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    |||||| ||||||  || || |||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  2520629 agaggagtgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 41508419 - 41508362
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttc 161  Q
    |||||||||||||||||||| ||||||||||||||||  ||| ||||||| |||||||    
T  41508419 agcactcacttttttattggatgaaatcaatgtatatttcactactttatatgggttc 41508362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 46517293 - 46517399
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||||| || ||  ||||| ||||||||||  ||||||||||  |||||||| | ||||||||||||||||||||| | | || |||||| ||||     
T  46517293 gaatgctagcaacactcactttttaacactctct--agcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaatttt 46517390  T
Q  168 caaagtgta 176  Q
    |||||||||    
T  46517391 caaagtgta 46517399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 29310443 - 29310527
Alignment:
Q  91 gaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    ||||||||| || | ||||||||||||||||||||||||   ||||   || |||||||||||||||| |||||||||| |||||    
T  29310443 gaacactctttctaacactcacttttttattgggtgaaactcatgtgggtctcaccactttatgtgggatccatttccatagtgt 29310527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 11692220 - 11692287
Alignment:
Q  109 tcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||| |||||||||||||| ||| |||||||| ||| ||||| |||| |||||||||    
T  11692220 tcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgta 11692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 34280965 - 34281060
Alignment:
Q  111 acttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    |||| ||||| ||||||||| ||||||| |  |||||||||||||| |||  |||| ||||||||  ||||||||||| ||| ||| |||||||||    
T  34280965 acttatttatcgggtgaaattaatgtatgtttcaccactttatgtgagttttattttcaaagtgtgagtcctacattggttttacctaataaaaga 34281060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 48374618 - 48374510
Alignment:
Q  67 ggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||||||||| || ||  ||||||||||||||||  || ||||||| ||||||||  || |||  ||| || |||||||||||| | ||||||| ||||    
T  48374618 ggaatgctagcaacactcacttttgaacactctct--agtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctattt 48374521  T
Q  167 ccaaagtgtat 177  Q
    |||||||||||    
T  48374520 ccaaagtgtat 48374510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 26703551 - 26703585
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  26703551 tacattgatttcacccaataaaagagtgagtgcta 26703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 31960020 - 31959966
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtata 139  Q
    |||||||| ||||||||| ||||||||||| |||||||| |||||| ||||||||    
T  31960020 tcttttgagcactctctctagcactcacttatttattggatgaaattaatgtata 31959966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 45909636 - 45909570
Alignment:
Q  71 tgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||| || || ||||||||| |||||||| | |||||||| ||||||||||| |||||||||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 6442184 - 6442308
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacat 186  Q
    |||| ||||||||||| | |||||| |  |||||||  |||||||||||||| | |||||| ||| || || ||| |||| ||||||||| | || |||     
T  6442184 ttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgta-gacccacaa 6442282  T
Q  187 tgatttcacccaataaaagagtgagt 212  Q
    |||||| | |||||||||||||||||    
T  6442283 tgatttaaaccaataaaagagtgagt 6442308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 37549620 - 37549693
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||| || || |||||||| |||| |||| |||||| ||| ||||||||| |||| ||||||||    
T  37549620 agaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 37549693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 37549708 - 37549659
Alignment:
Q  167 ccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||| |||||||||||| |||| ||||||||||||| |||||||    
T  37549708 ccaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgcta 37549659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 1687980 - 1688126
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| ||||||||| || |||| |||| |||||||||||   || |||||||||  |||| ||||||  |||||| || |||||||||   || |||  |    
T  1687980 agagaaatgctagcaacactatttttt-aacactctctctgtcattcactttttctttggatgaaattgatgtatgtctcaccactttgcatgagtttta 1688078  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||||||||||||| | ||||||  ||||| |||||||||||||||||||    
T  1688079 tttccaaagtgta-gacctacaacgatttaacccaataaaagagtgagt 1688126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 7775069 - 7775033
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgctata 218  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7775069 tacattgatttcatccaataaaagagtgagtgctata 7775033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 14759829 - 14759757
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || |||||||| ||||||| | ||||| |||| ||||||||| |||||| ||||||    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 19422996 - 19422936
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccacc 146  Q
    ||||| ||||||||||| | |||||||| ||| ||||| |||||||||||||| |||||||    
T  19422996 cttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccacc 19422936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 31874061 - 31874101
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtat 138  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgtat 31874101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 46994498 - 46994398
Alignment:
Q  113 ttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||||||||| | ||||||||||||||  |||||||||||| |||   ||||||||||||||||  | || ||  |||||| | ||||||||| |||||||    
T  46994498 ttttttattagatgaaatcaatgtatgacccaccactttaagtgatatccatttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagt 46994399  T
Q  213 g 213  Q
    |    
T  46994398 g 46994398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 8073432 - 8073385
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||||||| |||||| || |||||||||||||| ||||||||||||    
T  8073432 agcactcactcttttatcggatgaaatcaatgtatgtcccaccacttt 8073385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 38065460 - 38065409
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgg 157  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||    
T  38065460 cactaacttttttattggatgaaattaatgtatctcccaccactttaagtgg 38065409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 11824140 - 11824106
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  11824140 tacattgatttcatccaataaaagagtgagtgcta 11824106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 12271004 - 12271093
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||  ||||  |||| ||||||  | |||||||||||||| |||||||||||| ||| ||||| |||| |||||||||    
T  12271004 cttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgt-ggttctattttcaaagtgta 12271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 19494450 - 19494480
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagt 212  Q
    |||||||||||||||||||||||||||||||    
T  19494450 tacattgatttcacccaataaaagagtgagt 19494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 22190008 - 22189974
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  22190008 tacattgatttcatccaataaaagagtgagtgcta 22189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 32213056 - 32212966
Alignment:
Q  61 attagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||| |||||||||  || ||  ||||| ||||||||||| |||||||  | ||||||||| |||||||||||||| || ||| |||||    
T  32213056 attagaagaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactacttt 32212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 20954859 - 20954798
Alignment:
Q  71 tgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    ||||||| || || |||||| ||||||||||| | |||||||||||||||||| | ||||||    
T  20954859 tgctagcaacactctcttttcaacactctctcaaacactcacttttttattggcttaaatca 20954798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 25428472 - 25428545
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||| |||| |||| || || |||||||| ||||||||  |||||||||| ||||||||| | |||||||||||    
T  25428472 agagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 27888469 - 27888400
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    ||||||||||||||| || || |||||||| ||||||||| | |||||||| | ||||||| | ||||||    
T  27888469 tagaggaatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatca 27888400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 32055593 - 32055662
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatg 154  Q
    ||||||||||||| |||| | |||| |||  |||||||| |||||||| | ||| |||||||||||||||    
T  32055593 tcttttgaacactatctctaacactaactcatttattggatgaaatcattttatgtcccaccactttatg 32055662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 32828760 - 32828809
Alignment:
Q  110 cacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggt 159  Q
    |||||||||||| |||||||||||| || |||| |||| |||||||||||    
T  32828760 cacttttttattcggtgaaatcaatataaatcctaccattttatgtgggt 32828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 17354561 - 17354593
Alignment:
Q  105 gcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||||||||||| |||||||||||    
T  17354561 gcactcacttttttattgggtaaaatcaatgta 17354593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 26190069 - 26190021
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    ||||||||||||| |||| | |||||||| ||||||||||| |||||||    
T  26190069 tcttttgaacactttctctaacactcactcttttattgggtaaaatcaa 26190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 37600314 - 37600162
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||| | || || |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37600314 agaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 37600215  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| |||||||| |||||||||||| |||| |||||||||||||| ||||||    
T  37600214 tttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgcta 37600162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 54141056 - 54140925
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||| || ||||    
T  54141056 tcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgtaggttctac 54140957  T
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||| |||||||| ||||||||||||    
T  54140956 attgatttcatccaataaatgagtgagtgcta 54140925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 10769908 - 10769757
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || || |||||||| ||||||||| | |||  ||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  10769908 gaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttccat 10769809  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||| |||||||| ||||||||||||||||| | ||||||||||| |||||||    
T  10769808 ttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtgcta 10769757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 27243042 - 27243189
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||| |||||||| || || |||||||||||||||||| | |||||||| ||||||||| | ||||||||| || |||||||||||||||||||||||||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccat 27243141  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||||||||||||| || |||||||||| ||||||| | |||||||||    
T  27243142 ttccaaagtgtatgacccacattgatttaacccaatgagagagtgagt 27243189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 38928190 - 38928044
Alignment:
Q  67 ggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||||||||| || ||||||||||  |||| |||| || | ||| | ||||||||||| ||||||||||||||||| | ||||||| ||||||||||||    
T  38928190 ggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 38928091  T
Q  167 ccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  38928090 ccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtg 38928044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 24749073 - 24748945
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||||| ||||||| | |||||| | |||||| |||||| |||||||||| |||||||| ||||||||||||||||||| |||||||| |||||||    
T  24749073 tcttttgaacgctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctac 24748974  T
Q  185 attgatttcacccaataaaagagtgagtg 213  Q
    |||||||||| ||||||||||||||||||    
T  24748973 attgatttcatccaataaaagagtgagtg 24748945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 46237209 - 46237090
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||| |||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||    
T  46237209 tcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaaatgtaggtcctac 46237110  T
Q  185 attgatttcacccaataaaa 204  Q
    |||||||||| |||||||||    
T  46237109 attgatttcatccaataaaa 46237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 357790 - 357905
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcaccc 197  Q
    ||||| |||||||||| |||||||| | |||||||||||||  | ||||||||||||||||||||||||||||||||||   ||||||||||||||| ||    
T  357790 ctctctagcactcactcttttattgagggaaatcaatgtatgcctcaccactttatgtgggttccatttccaaagtgtagtacctacattgatttcatcc 357889  T
Q  198 aataaaagagtgagtg 213  Q
    ||||||| ||||||||    
T  357890 aataaaaaagtgagtg 357905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 50661685 - 50661564
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||| ||||||||||| | |||| ||| ||||||| | | ||||||||| || |||||||||||||||||||||||||||||||| |||||| || ||    
T  50661685 tcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccac 50661586  T
Q  185 attgatttcacccaataaaaga 206  Q
    |||||||| |||||||||||||    
T  50661585 attgatttaacccaataaaaga 50661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 43657156 - 43657040
Alignment:
Q  88 tttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacatt 187  Q
    ||||| |||| |||| |||||||||| ||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||  |||||    
T  43657156 tttgagcactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtaggtctcacatt 43657057  T
Q  188 gatttcacccaataaaa 204  Q
    | ||||||| |||||||    
T  43657056 gttttcaccaaataaaa 43657040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 37776886 - 37776740
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| |||||| ||||||||||||||| ||||||| | |||||||||||||| ||| |||||||| ||||||||| ||    
T  37776886 gaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 37776787  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    || ||||||||| | |||||| |||||| | ||| ||| |||||||||    
T  37776786 tttcaaagtgta-gacctacaatgatttaaaccactaagagagtgagt 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 21232705 - 21232604
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || |  |||||||| |||| |||  |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  21232705 gaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttccat 21232606  T
Q  165 tt 166  Q
    ||    
T  21232605 tt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 28529250 - 28529394
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||  | ||||||||| ||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccac--tgtgtgggttcaat 28529347  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    || ||||||||| | || ||| |||||| | ||||||| |||||||||    
T  28529348 tttcaaagtgta-gacccacaatgatttaaaccaataagagagtgagt 28529394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 46575944 - 46576092
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||| | || || ||| || ||||||||||| | |||||||| | ||||||| ||||| |||||||| |||||||||||| |||||||||||    
T  46575944 agaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttcca 46576043  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||| |||| |||| | || |||||||||| |||| || | |||||||||    
T  46576044 ttttcaaaatgtacgccccacattgatttaaccctattagagagtgagt 46576092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 13809078 - 13809215
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| ||||||||| || || ||||||  |||||||||| | |  ||||| ||||||||| | |||||||||||| |||||||| |||||||||||||||    
T  13809078 agagaaatgctagcaacactctcttttacacactctctctaact-tcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttcca 13809176  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataa 202  Q
    |||||||||| |||| || |||||| ||| |||||||||    
T  13809177 tttccaaagtatatgacccacattgttttaacccaataa 13809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 20791314 - 20791404
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  20791314 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgta 20791404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 46450056 - 46450209
Alignment:
Q  57 tttaattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccac-tttatgt 155  Q
    ||||||| ||||||||||||| || ||  ||||||||||||||||  |||||||||| ||||||| | || ||||||||||| ||||||||| ||| |||    
T  46450056 tttaatttgaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgt 46450153  T
Q  156 gggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||||| |||| ||||||||| | || ||| |||||| | ||||||| |||||||||    
T  46450154 gggttctatttgcaaagtgta-gacccacaatgatttaaaccaataagagagtgagt 46450209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 29775243 - 29775179
Alignment:
Q  145 ccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtg 209  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  29775243 ccacattatgtgggttccatttccaaagtgtaggtcctaccttgatttcacccaataaaagagtg 29775179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 14236038 - 14236127
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| |||||||||  |||||||||| ||||||||| |||||||||| ||| ||||||||||||||| | |||| ||||||||||||||    
T  14236038 ttttgcacactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgta 14236127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 20493630 - 20493482
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    ||||||||||||||| || ||  ||||| ||||||||||| | ||||||||  |||||||| |||||||||||||| ||| |||||||| || ||||||     
T  20493630 tagaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttca 20493531  T
Q  163 atttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    || | ||||||||| | || ||| |||||| | ||||||| |||||||||    
T  20493530 atattcaaagtgta-gacccacaatgatttaaaccaataagagagtgagt 20493482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 46160945 - 46161055
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||||||||||||  |||||||||| ||||||||| ||||||||||  || ||| |||||||| ||| ||||| |    
T  46160945 agaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttcta 46161042  T
Q  164 tttccaaagtgta 176  Q
    |||||||||||||    
T  46161043 tttccaaagtgta 46161055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 26310608 - 26310518
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| |||||| ||| ||||||||| |||||||||||||| |||||||| ||| ||| ||||| |||| |||||||||    
T  26310608 cttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgta 26310518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 24734701 - 24734848
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||| ||||| || ||  ||||| |||||  |||| || ||||||| ||||||||| ||||||||| |||| |||||||||||| ||||||||| |    
T  24734701 agaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaa 24734800  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||| ||||| ||| | || ||| |||||| | ||||||| |||||||||    
T  24734801 ttttcaaagagta-ggcccacaatgatttaaaccaataagagagtgagt 24734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 5452243 - 5452132
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| ||||||||||  | || ||||| ||||||||| |||||||||||||| |||||||||||| ||||| ||| ||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  165 ttccaaagtgta 176  Q
    || | |||||||    
T  5452143 tttctaagtgta 5452132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 41452078 - 41451932
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||| ||||| || ||  ||||| |||||  |||| || ||||||| ||||||||| ||||||||| |||| |||||||||||| ||||||||| ||    
T  41452078 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 41451979  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    || ||||| ||| | || ||| |||||| | ||||||| |||||||||    
T  41451978 tttcaaagagta-gacccacaatgatttaaaccaataagagagtgagt 41451932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 18427292 - 18427187
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    ||||||||  |||||||| |||||||||||||| |||||||| ||| ||||||||| |||| ||||||||| | || ||| |||||| | ||||||| ||    
T  18427292 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgta-gacccacaatgatttaaaccaataagag 18427194  T
Q  206 agtgagt 212  Q
    |||||||    
T  18427193 agtgagt 18427187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 45515657 - 45515599
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatccca 144  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  45515657 ctttttaacactctctccaacactcactattttattggatgaaatcaatgtatatccca 45515599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 52124140 - 52124028
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||| ||| ||||||| ||||||||||| ||| |||| |||||| ||||||| |||||| | ||| || |||||| |    
T  52124140 agaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaa 52124041  T
Q  164 tttccaaagtgta 176  Q
    ||| |||||||||    
T  52124040 ttttcaaagtgta 52124028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 55452196 - 55452087
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||| |||| || ||  ||||||||||||||||   | ||||||| ||||||||| || |||  |||||| |||||||||||| ||||||||| ||    
T  55452196 gaggaatgttagcaacactcacttttgaacactctctg--gtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctat 55452099  T
Q  165 ttccaaagtgta 176  Q
    ||||||||||||    
T  55452098 ttccaaagtgta 55452087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 37926569 - 37926676
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    |||||||||| ||||| |||||||||||||||  ||| || ||||||||||||  |||||| |||||||   | ||||||||||||| |||||| || ||    
T  37926569 cactcactttcttattaggtgaaatcaatgtaggtcctactactttatgtgggacccattttcaaagtgcgggacctacattgatttaacccaacaagag 37926668  T
Q  206 agtgagtg 213  Q
    ||| ||||    
T  37926669 agtaagtg 37926676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 49720185 - 49720075
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    |||||||||||  ||| ||  ||||| ||||||||||| | |||||||||  ||||||| | |||| |||||||||||||||| |||| ||||   ||||    
T  49720185 gaggaatgctaaggacactcacttttcaacactctctcaaacactcacttgcttattggattaaatgaatgtatatcccaccattttaagtggaacccat 49720086  T
Q  165 ttccaaagtgt 175  Q
    |||||||||||    
T  49720085 ttccaaagtgt 49720075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 38928006 - 38928075
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||| || || |||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  38928006 gaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 37600124 - 37600196
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || |||||||| ||||||||| ||||| |||| ||||||||| |||| ||||||||    
T  37600124 gaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 54140887 - 54140959
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||| || || |||||||| |||| |||| ||||||||||  |||||||| |||||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 357924 - 357874
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||||||  | |||||||||||||||||| |||||||||||||    
T  357924 tcttttgaacactctct--atcactcacttttttattggatgaaatcaatgta 357874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 29775136 - 29775202
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    ||||||||||||| || || |||||||| ||||||||| ||||  |||| |||||||||||||||||||    
T  29775136 gaggaatgctagcaacactctcttttgagcactctctctagca--cactcttttattgggtgaaatcaa 29775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 52951370 - 52951471
Alignment:
Q  62 ttagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttc 161  Q
    ||||| |||||||||| || || |||||| ||||||||||| |  ||||||| | | ||||| ||||||||||||  |  ||||||||||||||||| ||    
T  52951370 ttagaagaatgctagcaacactctctttttaacactctctcaaatactcactctatcattggatgaaatcaatgtggactccaccactttatgtgggatc 52951469  T
Q  162 ca 163  Q
    ||    
T  52951470 ca 52951471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 3313985 - 3314069
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||  |||| ||||| ||||||| | ||||||||||| || || || || ||||||| ||||||||||| ||||||||    
T  3313985 aacactctctttagcattcactattttattagatgaaatcaatgcatttctcatcattttatgtaggttccatttcaaaagtgta 3314069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 24748924 - 24748976
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||| ||||||||| | |||||||| ||||||||| |||||||||||||    
T  24748924 tcttttgagcactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 40716024 - 40715944
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||| ||||||||||| |||||||||| ||||||  |||||||| |||||||  | || |||||| ||||||||| ||||    
T  40716024 cttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaattt 40715944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 10948722 - 10948597
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| |||||| |||| ||||||||||| ||||||||  || || ||||||| | |||||||||| |||  |||| ||||  ||||||||   || |||    
T  10948722 cttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgta-aacccaca 10948624  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||| | |||||||||||||||||    
T  10948623 atgatttaaaccaataaaagagtgagt 10948597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 28529322 - 28529288
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  28529322 tacattgatttcatccaataaaagagtgagtgcta 28529288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 37600241 - 37600275
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||| ||||||    
T  37600241 tacattgatttcacccaataaaagagtgggtgcta 37600275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 42780778 - 42780708
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||||||| ||||||| | ||||||  | ||||||| ||||||| ||||||| ||| ||||||    
T  42780778 caccactttatgtgggatccattttctaagtgtgagacctacatggatttcatccaataagagaatgagtg 42780708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 46156696 - 46156766
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||||||||||  || ||||| | ||||| | || |||  ||||||||||||||||||||||||||    
T  46156696 caccactttatgtgggacccttttcctatgtgtaggccccacaacgatttcacccaataaaagagtgagtg 46156766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 54141004 - 54141038
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||| ||||||||||||    
T  54141004 tacattgatttcacccaataaatgagtgagtgcta 54141038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 7640779 - 7640686
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgg 157  Q
    ||||||||||||| ||| || |||||| ||||||| ||| | ||||  |||| ||||||| |||||| ||||||| ||| ||||| ||| ||||    
T  7640779 agaggaatgctagggacactctcttttcaacactcactctaacacttgctttcttattggatgaaattaatgtatgtcctaccacattaagtgg 7640686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 10769719 - 10769791
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||   || || |||||||| ||||||||| |||||| ||| ||||||| | |||||||||||||    
T  10769719 gaggaatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgta 10769791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 19345132 - 19345072
Alignment:
Q  116 tttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||| |||||||||||||| |||||||||||| |  |||||| |||| |||| ||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgta 19345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 52951543 - 52951475
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaa 133  Q
    ||||| ||||||| || || |||||| ||||||||||| |||||||||| | | ||||| |||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 35689497 - 35689628
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||| ||    
T  35689497 tcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccac 35689596  T
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    |||| ||||||||||||||| |||||||||||    
T  35689597 attgttttcacccaataaaaaagtgagtgcta 35689628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 7599606 - 7599457
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    ||||||||| |||| || || | |||||||||||||||| |||||  ||| ||||||||| |||||||||||||||||||| |||||||||||||||||     
T  7599606 agaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttcct 7599507  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||||||| ||||||||||||||| || |||||||| ||||||||    
T  7599506 tttccaaagtgtaggtcctacattgattttactcaataaaaaagtgagtg 7599457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 1205829 - 1205975
Alignment:
Q  70 atgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcca 169  Q
    |||||||| || || |||||||| ||||||||  |||||||||| ||||||| ||| |||| ||||||| || ||||||||||| ||||||| |||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttcca 1205928  T
Q  170 aagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  1205929 aagtgtaggtcttacattgatttcactcaataaaagagtgagtgcta 1205975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 33417680 - 33417830
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | || || ||||||||  ||||||||  |||||||| | |||||| ||||||||||||| || | ||||||||||||||||||| |||    
T  33417680 gaggaatgctaacaacactttcttttgagtactctctct-gcactcacatctttattaggtgaaatcaatgcatgttccaccactttatgtgggtttcat 33417778  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  33417779 ttccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtgcta 33417830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 28212038 - 28211930
Alignment:
Q  96 ctctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcac 195  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||| || ||||| ||||||||||||||||||  ||||| || ||||||||||||||||||    
T  28212038 ctctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagtataggtcctacattgatttcac 28211939  T
Q  196 ccaataaaa 204  Q
    |||||||||    
T  28211938 ccaataaaa 28211930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 43026310 - 43026412
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||| ||||||||||  |||||||||||||||||| ||| |||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||    
T  43026310 tcttttaaacactctct--agcactcacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaagtgtaggtcctac 43026407  T
Q  185 attga 189  Q
    |||||    
T  43026408 attga 43026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 6387558 - 6387706
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    ||||| ||||||||| || || ||||||| |||||||||  | |||||||| ||||||||| | |||||||||||| |||||||| ||||||||||||||    
T  6387558 tagagaaatgctagcaacactctcttttggacactctct--aacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttcc 6387655  T
Q  163 atttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||||| || | || |||||| ||| ||||||||| ||| ||||||    
T  6387656 atttccaaagtatacgacccacattgttttaacccaataagagaatgagtg 6387706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 13407485 - 13407359
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacat 186  Q
    ||||| |||||||||| | |||| ||||||||||||| | |||||||||||| |||||||| |||| |||||||| |||| ||||||||||| || ||||    
T  13407485 ttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacat 13407386  T
Q  187 tgatttcacccaataaaagagtgagtg 213  Q
    |||||| ||||||| | ||| ||||||    
T  13407385 tgatttaacccaatgagagaatgagtg 13407359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 1977357 - 1977210
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| |  ||  ||||| ||||||||||| |||||||||| || | |||| |||||||||||||| ||| |||||||| ||||||||| |    
T  1977357 agaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaa 1977258  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||| |||||||||  ||| ||| |||||| | |||||||||||||||||    
T  1977257 ttttcaaagtgtagatcc-acaatgatttaaaccaataaaagagtgagt 1977210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 34303562 - 34303470
Alignment:
Q  124 gtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||| || ||||||| ||||||| ||| |||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  34303562 gtgaaatcaatgtatgtctcaccactctatgtggcttcgattttcaaagtgtaggtcttacattgatttcacccaataaaagagttagtgcta 34303470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 23685149 - 23685239
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||| |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  23685149 cttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgta 23685239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 23142984 - 23142859
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccac--------cactttatgtgggttccatttccaaagtgtatg 178  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||| ||| | ||||        |||||||||||||||||||||||||||| || |    
T  23142984 ttttgagcactctctcaagcacttacttttttattgggtgaaatcaatttatgttccacataaccaccactttatgtgggttccatttccaaagtctagg 23142885  T
Q  179 tcctacattgatttcacccaataaaa 204  Q
    | | |||||| |||||||||||||||    
T  23142884 ttccacattgttttcacccaataaaa 23142859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 9952919 - 9952829
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| |||||||| ||||||||||| ||||||||||| || |||||||||||| |||| |||| |||| |||||||||    
T  9952919 cttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgta 9952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 32072115 - 32072205
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| |||||||||| ||||||||| |||||| ||||||| |||||||||||| ||||||||| ||||  ||||||||    
T  32072115 cttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgta 32072205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 173
Target Start/End: Complemental strand, 34861369 - 34861262
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    ||||||||||||||  ||||  ||||| ||||||||||  |||||||||| ||||||||| |||||||||||||| |||||||||||| ||| ||||| |    
T  34861369 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaa 34861272  T
Q  164 tttccaaagt 173  Q
    ||| ||||||    
T  34861271 ttttcaaagt 34861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 28414031 - 28413944
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagt 173  Q
    ||||| ||||||||||| ||| |||||||||||||| | |||||||||||||| |||||||||||| |||| |||| |||| ||||||    
T  28414031 cttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagt 28413944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 8903871 - 8903960
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| ||||||||||| || |||||||| |||||| | |||||||||||||| |||||||||||| ||| ||||| |||| |||||||||    
T  8903871 ttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgta 8903960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 25915088 - 25915175
Alignment:
Q  127 aaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt--atgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||||||||||| ||| || ||||||| |||||||||||| ||||||||  | || | ||||||||||||||||||||||||||||||    
T  25915088 aaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagt 25915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 12212230 - 12212163
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    ||||||||||||||||  |||||||||||||||| | || ||||||||||||||||| ||||||||||    
T  12212230 caccactttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtga 12212163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 12456658 - 12456591
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    ||||||||||||||||  |||||||||||||||| | || ||||||||||||||||| ||||||||||    
T  12456658 caccactttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtga 12456591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 35689666 - 35689595
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    ||||||||||| || | || |||||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  35689666 gaggaatgctaacggcactctcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgt 35689595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 45246459 - 45246542
Alignment:
Q  93 acactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||||  |||||||||| ||||||||| | |||||||||||| || |||||||||||| | |||| ||||||||||||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgta 45246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 31301133 - 31301223
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||||||| | ||| ||||||||| ||||||||| |||||||||||||| | |||||||||| |||| |||| |||| ||| |||||    
T  31301133 cttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgta 31301223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 5979878 - 5979987
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatt 165  Q
    |||||||||||| || ||  ||||| ||||||||||| || |  |||| || |||||| ||| |||||||||| |||||||||||| ||||||||| |||    
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatt 5979977  T
Q  166 tccaaagtgt 175  Q
    | ||||||||    
T  5979978 ttcaaagtgt 5979987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 8914767 - 8914911
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||| | ||||||| | |||||||| ||| ||||| | ||| |||||||| |||||||||||| |||||||||      
T  8914767 agaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcat 8914866  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtg 209  Q
    ||| ||||||||| | || ||| |||||| | ||||||| ||||||    
T  8914867 ttttcaaagtgta-gacccacaatgatttaaaccaataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 17499389 - 17499270
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatt 191  Q
    ||||||||||| |||||||  | ||||||||| |||||||||| ||| |||||||| ||| ||| ||||| |||| |||||||||  ||| ||| |||||    
T  17499389 aacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatcc-acaatgatt 17499291  T
Q  192 tcacccaataaaagagtgagt 212  Q
    | | ||||||| |||||||||    
T  17499290 taaaccaataagagagtgagt 17499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 902481 - 902410
Alignment:
Q  140 tcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgag 211  Q
    |||||||||||||||||||  |||||||||||| ||| |  | |||||||||||||||||||||| ||||||    
T  902481 tcccaccactttatgtgggacccatttccaaagcgtaggatccacattgatttcacccaataaaaaagtgag 902410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 45525059 - 45524949
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||| || ||| || |||||| |||||||||| || |||||| ||| ||||||| | ||||||||||||  |||||||||||  ||||   ||||    
T  45525059 gaggaatgccagggacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttgagtggaacccat 45524960  T
Q  165 ttccaaagtgt 175  Q
    |||||||||||    
T  45524959 ttccaaagtgt 45524949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 43506534 - 43506678
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||||||||||||||  | |||||||||||| ||||| |  ||||||||||| | |||||||||| ||||||||| |    
T  43506534 agaggaatgctagcaacactcacttttgaacactctct--aacactcacttttt-attggatataatcaatgtatgttccaccactttgtgtgggttcta 43506630  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
     || ||| ||||| | || ||| |||||| | ||||||| |||||||||    
T  43506631 ctttcaatgtgta-gacccacaatgatttaagccaataagagagtgagt 43506678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 16983390 - 16983502
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||||||||||||| || ||  ||||| |||||||| || ||||||||||  |||||||| | |||||| | ||| ||||| |||||| || |||||| |    
T  16983390 agaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaa 16983489  T
Q  164 tttccaaagtgta 176  Q
    ||| |||||||||    
T  16983490 ttttcaaagtgta 16983502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 35188401 - 35188497
Alignment:
Q  117 ttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||||||| | ||||  |||||||||||||| |||||  | |||||||||||||  | || ||||| ||||||||| |||| ||||||||||    
T  35188401 ttattgggtgaaagccatgtggatcccaccactttacgtgggacctatttccaaagtgtgagacccacattaatttcaccctataagagagtgagtg 35188497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 1205991 - 1205941
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  1205991 ttttgaacactctctttagcactcactcttttattgagtgaaatcaatgta 1205941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 10197860 - 10197762
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaa 204  Q
    |||||||| |||||||  |||||||||||  |  || || ||||||||||||| || ||||| |||||||| |  ||| ||||||||||||||||||||    
T  10197860 cactcactcttttattatgtgaaatcaatacaagtctcatcactttatgtgggatctatttctaaagtgtaagatctatattgatttcacccaataaaa 10197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 11962822 - 11962753
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||| ||||||||  | ||||||| ||||||||||||| ||||||| ||||| |||| |||||||||    
T  11962822 actcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgta 11962753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 45218700 - 45218594
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    |||||||||||||| ||| || ||||||  |||||||||  | ||||| || ||||||||| |||||||||||  | ||||||||||||| ||||   ||    
T  45218700 tagaggaatgctagggacactctcttttatacactctct--aacactcgctcttttattggatgaaatcaatgcgtgtcccaccactttaagtggaaccc 45218603  T
Q  163 atttccaaa 171  Q
    |||||||||    
T  45218602 atttccaaa 45218594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 17741683 - 17741599
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||| |||||  | || |||||||| |||||||||||||| |||||||| ||| || | |||| |||| |||||||||    
T  17741683 aacactctctctagcacgtaattgtttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgta 17741599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 9192060 - 9192099
Alignment:
Q  127 aaatcaatgtatatcccaccactttatgtgggttccattt 166  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  9192060 aaatcaatgtatatcccaccactttgtgtgggttcaattt 9192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 11310497 - 11310422
Alignment:
Q  117 ttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgattt 192  Q
    |||||| ||||||||||||||| ||||||||  |||||||  || ||||| ||||||||||| || || |||||||    
T  11310497 ttattgagtgaaatcaatgtatgtcccaccatattatgtgaatttcattttcaaagtgtatgacccacgttgattt 11310422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 13407318 - 13407389
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    ||||||||||||| || || |||||||||||||||||| | |||||| | | | ||||||| ||||||||||    
T  13407318 gaggaatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgt 13407389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 24683765 - 24683690
Alignment:
Q  57 tttaattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    ||||||| |||||||||||| ||| || |||||| |||||| |||||| |||||||||| | ||||| | ||||||    
T  24683765 tttaatttgaggaatgctagggacactctcttttcaacactatctccaacactcactttctgattggcttaaatca 24683690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 17716889 - 17716959
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||  ||||||||| |||||||||| ||| |||||| | ||||||||||||  |||| |||||||||    
T  17716889 cactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgta 17716959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 23142810 - 23142880
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    ||||||||||||||| || || |||||||| ||||||||  |||| ||| ||||||||||||||||| ||||||    
T  23142810 tagaggaatgctagcaacactctcttttgagcactctct--agcattca-ttttttattgggtgaaaacaatgt 23142880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 28485512 - 28485454
Alignment:
Q  117 ttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    ||||||| |||||| ||||||| ||||||||||||| ||||   |||||||||||||||    
T  28485512 ttattggatgaaattaatgtatgtcccaccactttaagtggaacccatttccaaagtgt 28485454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 31703823 - 31703892
Alignment:
Q  143 caccactttatgtgggttccatttccaaagtgt-atgtcctacattgatttcacccaataaaagagtgagt 212  Q
    |||||||||||||||| |||||||||||||||| || ||| ||||| |||| | ||||||||| |||||||    
T  31703823 caccactttatgtgggatccatttccaaagtgtgatatcc-acattaattttaaccaataaaaaagtgagt 31703892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 34861298 - 34861332
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  34861298 tacattgatttcatccaataaaagagtgagtgcta 34861332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 39023459 - 39023509
Alignment:
Q  97 tctctccagcactcacttttttattgggtgaaatcaatgtatatcccacca 147  Q
    |||||| |||||||| || |||||||| |||||||||||||| ||||||||    
T  39023459 tctctctagcactcatttatttattggatgaaatcaatgtatgtcccacca 39023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 25915195 - 25915146
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    |||| ||||||||| | || ||||||| ||||||||||||||||||||||    
T  25915195 tttttaacactctccctagtactcactcttttattgggtgaaatcaatgt 25915146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 33417841 - 33417796
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||| |||||||||| |||||||| ||||||| ||||||    
T  33417841 aacactctctctagcactcactcttttattgagtgaaattaatgta 33417796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 35797414 - 35797503
Alignment:
Q  87 ttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||| | |||| |||| ||||| ||||||||| | |||||||||||| | |||||||||| || | |||| ||||  ||||||||    
T  35797414 ttttgaacaatttctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgta 35797503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 44709342 - 44709309
Alignment:
Q  180 cctacattgatttcacccaataaaagagtgagtg 213  Q
    |||||||||||||||| |||||||||||||||||    
T  44709342 cctacattgatttcacacaataaaagagtgagtg 44709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 902410 - 902438
Alignment:
Q  108 ctcacttttttattgggtgaaatcaatgt 136  Q
    |||||||||||||||||||||||||||||    
T  902410 ctcacttttttattgggtgaaatcaatgt 902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 31301184 - 31301152
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgc 214  Q
    ||||||||||||| |||||||||||||||||||    
T  31301184 tacattgatttcatccaataaaagagtgagtgc 31301152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 38091537 - 38091469
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatca 132  Q
    |||||||||||||| ||  | |||||| ||||||||||||| |||||||||| | ||||| | ||||||    
T  38091537 agaggaatgctagcaacattctcttttcaacactctctccaacactcactttctaattggcttaaatca 38091469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 44709296 - 44709340
Alignment:
Q  93 acactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||| | |||||||| |||||||| ||||||||||||||    
T  44709296 acactctctctaacactcactcttttattgtgtgaaatcaatgta 44709340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 42862605 - 42862453
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    ||||||||||||   || || |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42862605 agaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 42862506  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||| ||||||||    | || ||||||||||||||||||||||||||||||||    
T  42862505 ttttcaaagtgtgaaacataaattgatttcacccaataaaagagtgagtgcta 42862453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 16178601 - 16178726
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||    
T  16178601 tcttttgtgcactctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggttctac 16178699  T
Q  185 attgatttcacccaataaaagagtgag 211  Q
    |||||||||| ||||||||||||||||    
T  16178700 attgatttcatccaataaaagagtgag 16178726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 13069958 - 13070085
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||| ||||| |||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||    
T  13069958 tcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtcctac 13070056  T
Q  185 attgatttcacccaataaaagagtgagtg 213  Q
    |||||||| || |||||||||||||||||    
T  13070057 attgattttactcaataaaagagtgagtg 13070085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 44832460 - 44832610
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||| | ||  | |||||||| || ||| || | ||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  44832460 gaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccat 44832559  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgct 215  Q
    |||||||||| | ||||||||||||||||||||||||||| | ||||||||    
T  44832560 ttccaaagtgcaggtcctacattgatttcacccaataaaaaaatgagtgct 44832610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 37315564 - 37315708
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || || |||||||| ||||||||| | |||||||| ||||   ||||||||||||||||| ||||||||||||||||  ||| ||||| |    
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactctttt---gggtgaaatcaatgtatgtcccaccactttatgtaagtttcattttc 37315660  T
Q  169 aaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||| ||| || ||||||||||||||||||||||||||||||||||||    
T  37315661 aaagcgtaggttctacattgatttcacccaataaaagagtgagtgcta 37315708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 30867095 - 30866964
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| |||| |||| |||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||| |||||||||  ||| ||    
T  30867095 tcttttgagcactatctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccac 30866996  T
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    |||| ||||||| ||||||| | |||||||||    
T  30866995 attgttttcacctaataaaaaaatgagtgcta 30866964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 47237923 - 47237773
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatt 165  Q
    |||||||||| | || || |||||||||||||||||| |||| ||||| ||||||||| |||||||||| ||| |||||||||||||| |  ||| ||||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  166 tccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    | ||||||||| || ||||||  |||||| |||||||||||||||||||||    
T  47237823 ttcaaagtgtaggttctacatgaatttcatccaataaaagagtgagtgcta 47237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 215
Target Start/End: Original strand, 40812032 - 40812184
Alignment:
Q  63 tagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcc 162  Q
    |||||| |||||||| || || | |||||||||||||||| |||||||||| |||||||||||||||||||| | |||| ||||| || | ||||||| |    
T  40812032 tagaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaatatttatcacaccatttaacgtgggtttc 40812131  T
Q  163 atttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgct 215  Q
    |||||||||||||| ||| |||||| |||| | ||||||||| ||||| ||||    
T  40812132 atttccaaagtgtaggtcatacattaattttatccaataaaaaagtgaatgct 40812184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 51206079 - 51206191
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    ||||||||||  |||||| | |||||||||||||| ||||| ||||||||||| ||| ||||| |||| |||| ||||||||||||||||||||||||||    
T  51206079 agcactcactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaa 51206178  T
Q  204 agagtgagtgcta 216  Q
    |||||||||||||    
T  51206179 agagtgagtgcta 51206191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 39016659 - 39016811
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| ||||||||| ||  | |||||| ||||||||||  | |||| ||| ||||||||| |||||||||||||| |||||||| |||| ||||||||||    
T  39016659 agagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttcca 39016758  T
Q  164 tttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||    |||||||||||| ||| ||||||||||| |||||||    
T  39016759 tttccaaagtgtagtatctacattgattttacctaataaaagagtaagtgcta 39016811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 2088818 - 2088700
Alignment:
Q  95 actctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttca 194  Q
    |||||||| | |||||||| ||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||| |||| |||| |    
T  2088818 actctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtagatcctgcattaatttaa 2088719  T
Q  195 cccaataaaagagtgagtg 213  Q
     | ||||||||||||||||    
T  2088718 gctaataaaagagtgagtg 2088700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 2187976 - 2187849
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctac 184  Q
    |||||||| ||||||||| |||  || || ||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||| |||| ||    
T  2187976 tcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggtt-cattttcaaagtgtaggtcccac 2187878  T
Q  185 attgatttcacccaataaaagagtgagtg 213  Q
    |||| |||||| |||||||| | ||||||    
T  2187877 attgttttcacacaataaaaaaatgagtg 2187849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 25719268 - 25719149
Alignment:
Q  93 acactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgattt 192  Q
    |||||||||| | |||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||| | || ||| ||||||    
T  25719268 acactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgattt 25719169  T
Q  193 cacccaataaaagagtgagt 212  Q
     ||||||| | |||||||||    
T  25719168 aacccaatcagagagtgagt 25719149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 44832655 - 44832577
Alignment:
Q  59 taattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||||||||||||||| || || |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  44832655 taattagaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 41278759 - 41278658
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaaga 206  Q
    ||||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||| |||| |||  |||||||||| || |||||||||||||||    
T  41278759 actcactcttttattgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaaatgttggtcctacattcatatcacccaataaaaga 41278660  T
Q  207 gt 208  Q
    ||    
T  41278659 gt 41278658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 43771144 - 43771269
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||||||||||||||| |  ||||||| ||||||||| |||||||||||||| |||||||||| | ||||||||| |||| ||||||||| | || |||    
T  43771144 cttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgta-gacccaca 43771242  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||| | ||||||| |||||||||    
T  43771243 atgatttaaaccaataagagagtgagt 43771269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 20225522 - 20225413
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||||||||||||||  |||||||||| ||||||||| || |||| ||| || |||||||||||| ||||||||| ||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  165 ttccaaagtgta 176  Q
    ||||||||||||    
T  20225424 ttccaaagtgta 20225413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 722181 - 722300
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatt 191  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||| |||  |||| ||||  |||||||| | || ||| |||||    
T  722181 aacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaatgatt 722279  T
Q  192 tcacccaataaaagagtgagt 212  Q
    | | ||||||| |||||||||    
T  722280 taaaccaataagagagtgagt 722300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 8108957 - 8109064
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    ||||||||| || ||  ||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||| | ||| |||  |||| |||| |    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttc 8109056  T
Q  169 aaagtgta 176  Q
    ||||||||    
T  8109057 aaagtgta 8109064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 34129562 - 34129473
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgt 175  Q
    ||||| || |||||||| |||||||||| || |||||| ||| ||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  34129562 cttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgt 34129473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 19447180 - 19447275
Alignment:
Q  117 ttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| || | | || ||| |||||| || |||| | |||||||||    
T  19447180 ttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagt 19447275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 51206228 - 51206157
Alignment:
Q  66 aggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||| ||||| || || |||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 42862410 - 42862484
Alignment:
Q  60 aattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaat 134  Q
    |||||||||||||||||| || || |||||||| |||| | || |||||||||| ||||||||||||||||||||    
T  42862410 aattagaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaat 42862484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 50164413 - 50164503
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| ||||||||||  |||||||| | |||||||||||| |||||||| ||| || |||||| |||| |||||||||    
T  50164413 ctttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgta 50164503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 21777008 - 21776915
Alignment:
Q  85 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatg 178  Q
    ||||||| |||||||||| | || ||||| ||||||||| | |||||||||||| ||| |||||||||||||| ||  ||||||||| ||||||    
T  21777008 tcttttggacactctctctaacattcactcttttattggataaaatcaatgtatgtcctaccactttatgtggattttatttccaaaatgtatg 21776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 49739032 - 49738959
Alignment:
Q  140 tcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagtg 213  Q
    ||||||||| |||||||||  | |||||||||||||||| || |||| ||||||||| ||||||||||||||||    
T  49739032 tcccaccacattatgtgggaccaatttccaaagtgtatgacccacatggatttcaccaaataaaagagtgagtg 49738959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 22592322 - 22592406
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaa 170  Q
    |||||||||| ||||||  ||||||||| ||||||||| |||||| ||||| | |||||||||||| ||| ||||| ||||||||    
T  22592322 cttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctatttccaa 22592406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 24834574 - 24834686
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttcca 163  Q
    |||| ||||||||| || ||  |||||  |||||||||| | | ||||| |||||||||| || ||||||||||| |||||||| ||| ||||||||| |    
T  24834574 agagaaatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa 24834673  T
Q  164 tttccaaagtgta 176  Q
    ||| |||||||||    
T  24834674 ttttcaaagtgta 24834686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 51475188 - 51475303
Alignment:
Q  94 cactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttc 193  Q
    ||||||||| | |||||||  | ||||||||||||| | ||||  ||| |||||||||||||||| ||||||||||| ||||    || |||| ||||||    
T  51475188 cactctctctaacactcaccctcttattgggtgaaacccatgtggatctcaccactttatgtgggatccatttccaatgtgtggtacccacatggatttc 51475287  T
Q  194 acccaataaaagagtg 209  Q
    ||||||||| ||||||    
T  51475288 acccaataagagagtg 51475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 754742 - 754617
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| |||||| |||| | |||||||||||||||||| |||| |||| |||| |||||||||||| |||  |||| ||||  |||||||| | || |||    
T  754742 cttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccaca 754644  T
Q  186 ttgatttcacccaataaaagagtgagt 212  Q
     |||||| | ||||||| |||||||||    
T  754643 atgatttaaaccaataagagagtgagt 754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 49242188 - 49242278
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||||||||| || | || ||||||||| ||||| |||||||||| ||| ||||| |||||| ||||||||| |||| ||| |||||    
T  49242188 cttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgta 49242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 50571882 - 50571972
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||| ||||||||||| |||||| ||| ||||||| | ||||||||||||||  |||| || ||||||||| ||| |||| |||||||||    
T  50571882 cttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgta 50571972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 50879474 - 50879559
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaa 171  Q
    |||||||||||||| || |||||||||| ||||||||  || |||  ||| || |||||||| ||||||||||||| |||||||||    
T  50879474 cttttgaacactctttctagcactcactcttttattgaatggaattcatgcatgtcccaccattttatgtgggttctatttccaaa 50879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 49682935 - 49682863
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||| |||||||||||| || ||||||||||||||||| ||||||||||| ||  ||| |||| |||||||||    
T  49682935 agcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgta 49682863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 30866930 - 30866997
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgt 136  Q
    ||||||||| || || |||||| ||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  30866930 aatgctagcaacgctctcttttaaacactctctctagcactcatttttttattaggtgaaaacaatgt 30866997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 39471154 - 39471300
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccat 164  Q
    ||||||||||||| || ||  ||||| || |||||||  | |||  ||| ||||||| | |||||||||||||| |||||||||||| ||| ||||| ||    
T  39471154 gaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaat 39471253  T
Q  165 ttccaaagtgtatgtcctacattgatttcacccaataaaagagtgagt 212  Q
     | ||||||||| | || ||| |||||| | ||||||| |||||||||    
T  39471254 cttcaaagtgta-gacccacaatgatttaaaccaataagagagtgagt 39471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 8109025 - 8108991
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  8109025 tacattgatttcacccaataaaagagtgagtgcta 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 40991773 - 40991691
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccacc 146  Q
    |||||||||||||| || ||  ||||| ||||||||||| | |||||||| ||| ||||| |||||||||| ||| |||||||    
T  40991773 agaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccacc 40991691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 29699507 - 29699588
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttc 167  Q
    |||||||| || || || |||||||||| ||||||||| ||||||||||  || |||||||||||| ||| ||||| |||||    
T  29699507 cttttgaataccctttctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctatttc 29699588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 37315743 - 37315674
Alignment:
Q  68 gaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||||||||| || || | |||||| |||||||   |||||||||| |||||||||||||||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgta 37315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 39016850 - 39016777
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    |||| |||| |||| || || |||||||||||||||||| |||||| ||| ||||||| ||| |||||||||||    
T  39016850 agagaaatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 52671869 - 52671938
Alignment:
Q  107 actcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||||||||| |||||| ||||||| |||||||| |||||||  |||| ||||  ||||||||    
T  52671869 actcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgta 52671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 5545642 - 5545702
Alignment:
Q  132 aatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgattt 192  Q
    ||||||| ||||||||||||||||||| ||||||| |||| |||| | || ||||||||||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgattt 5545702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 20454558 - 20454682
Alignment:
Q  86 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctaca 185  Q
    ||||| ||||||||||| |||||||||| ||||||| | | |||||||||||| |||   |||||| ||| ||||| |||| |||||||||  ||| |||    
T  20454558 cttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcc--acactttgtgttggttcaattttcaaagtgtagatcc-aca 20454654  T
Q  186 ttgatttcacccaataaaagagtgagtg 213  Q
     |||||| |  |||||| ||||||||||    
T  20454655 atgatttaaatcaataacagagtgagtg 20454682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 19484532 - 19484626
Alignment:
Q  115 ttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaagagtga 210  Q
    |||||||||||||||||||||||| | |||||||||||||   | | ||||| |||||| || |||| ||||| |||| | ||||||||| |||||    
T  19484532 ttttattgggtgaaatcaatgtatgt-ccaccactttatgcaagcttcattttcaaagtataggtcccacattaatttaaaccaataaaatagtga 19484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 40812103 - 40812072
Alignment:
Q  185 attgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||||||||||||||||    
T  40812103 attgatttcacccaataaaagagtgagtgcta 40812072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 15626358 - 15626400
Alignment:
Q  111 acttttttattgggtgaaatcaatgtatatcccaccactttat 153  Q
    ||||||||||||  |||||||||||||||| ||||||||||||    
T  15626358 acttttttattgaatgaaatcaatgtatattccaccactttat 15626400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 24938557 - 24938456
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    |||||||| ||||||||| || ||||||||||| |||||||| ||| | ||| ||| ||||  |||||||| | |||||| |||||| | ||||||| ||    
T  24938557 cactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgta-gacctacaatgatttaaaccaataagag 24938459  T
Q  206 agt 208  Q
    |||    
T  24938458 agt 24938456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 27654478 - 27654584
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    |||||||| ||| || |||||| ||||||||||| | |||||| | | ||||||| | |||  ||||||| ||||||||||||| ||||   ||||||||    
T  27654478 aatgctagggacactctcttttcaacactctctctaacactcattctcttattggataaaactaatgtatgtcccaccactttaagtggaacccatttcc 27654577  T
Q  169 aaagtgt 175  Q
    || ||||    
T  27654578 aacgtgt 27654584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 42862532 - 42862566
Alignment:
Q  182 tacattgatttcacccaataaaagagtgagtgcta 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  42862532 tacattgatttcacccaataaaaaagtgagtgcta 42862566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 38636367 - 38636428
Alignment:
Q  98 ctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggt 159  Q
    ||||||| |||||||| ||||||| | | |||||||||||| || ||| |||||||||||||    
T  38636367 ctctccaccactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggt 38636428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 4138913 - 4138973
Alignment:
Q  116 tttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    |||||||| |||||||||||||| ||||||||  || | ||| ||| ||||||||||||||    
T  4138913 tttattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgta 4138973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 13070126 - 13070054
Alignment:
Q  65 gaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||| ||||||| || || ||||||||||| | |||| | |||||||| |||||||| || |||||||||||    
T  13070126 gaggagtgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgta 13070054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 49077233 - 49077357
Alignment:
Q  52 atgtatttaattagaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccacttt 151  Q
    |||||||| | | ||||||||||||| || ||   |||| |||| |||||  |||||||| | ||||||| | | |||| ||| ||| ||||||||||||    
T  49077233 atgtattttagttgaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccacttt 49077332  T
Q  152 atgtgggttccatttccaaagtgta 176  Q
     ||||||||| ||||  ||||||||    
T  49077333 gtgtgggttcaatttttaaagtgta 49077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 27360 - 27463
Alignment:
Q  115 ttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtg-tatgtcctacattgatttcacccaa-taaaagagtgagt 212  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  27360 ttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgttatgtcctacattgatttcacccaattaaaagagtgagt 27459  T
Q  213 gcta 216  Q
    ||||    
T  27460 gcta 27463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 31057 - 30945
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    |||||||||||||||||| |||||||| || |||| ||  |||||||||| |||||||| ||| ||||||||| || |||||||||| ||||||||||||    
T  31057 agcactcacttttttattaggtgaaattaacgtatgtcataccactttatatgggttccgttttcaaagtgtaggttctacattgatgtcacccaataaa 30958  T
Q  204 agagtgagtgcta 216  Q
    | ||||| |||||    
T  30957 aaagtgaatgcta 30945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 30906 - 30979
Alignment:
Q  64 agaggaatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 137  Q
    ||||||| |||||| || || ||||||||  ||||| || |||| ||||||||||||||||||| |||||||||    
T  30906 agaggaaggctagcaacactctcttttgagtactctttctagcattcacttttttattgggtgacatcaatgta 30979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 9688 - 9772
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||  ||||||||    
T  9688 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgta 9772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 11234 - 11318
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgta 176  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||  ||||||||    
T  11234 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgta 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 27848 - 27955
Alignment:
Q  104 agcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaa 203  Q
    |||||||||  ||||||||| || ||||||||||| |||||||||||| ||||||||| |||||||||||||| | || ||| |||||| | |||||||     
T  27848 agcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgta-gacccacaatgatttaaaccaataag 27946  T
Q  204 agagtgagt 212  Q
    |||||||||    
T  27947 agagtgagt 27955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 28334 - 28437
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtgtatgtcctacattgatttcacccaataaaag 205  Q
    |||||||||| ||||||| ||||||||||||   ||||| || ||||||||||  |||||| ||||||||  | || |||||||||||||||||||| ||    
T  28334 cactcactttcttattggatgaaatcaatgtgggtcccatcaatttatgtgggacccattttcaaagtgtgggacccacattgatttcacccaataagag 28433  T
Q  206 agtg 209  Q
    ||||    
T  28434 agtg 28437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 35632 - 35691
Alignment:
Q  106 cactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatt 165  Q
    |||||||| | ||||| | |||||||||||||| ||||| || |||||||||||||||||    
T  35632 cactcactctcttatttgatgaaatcaatgtatgtcccatcattttatgtgggttccatt 35691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 2491 - 2409
Alignment:
Q  92 aacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttccaaagtg 174  Q
    |||| |||||| || ||||||| | |||||||  |||||||||||  |   |||||||||||||||| |||||||||||||||    
T  2491 aacattctctctagtactcactctattattggaggaaatcaatgtggactacaccactttatgtgggatccatttccaaagtg 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 296837 - 296943
Alignment:
Q  69 aatgctagcgactctatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatatcccaccactttatgtgggttccatttcc 168  Q
    |||||||| ||| || |||||| ||||||||||| | |||||||| | ||||||| |||||  | ||||| ||||||||| ||| ||||   ||||||||    
T  296837 aatgctagggacactttcttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccaccaccttaagtggaacccatttcc 296936  T
Q  169 aaagtgt 175  Q
    || ||||    
T  296937 aatgtgt 296943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University