View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18947_low_56 (Length: 251)
Name: NF18947_low_56
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18947_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 3261902 - 3262140
Alignment:
| Q |
1 |
ccgctaggatcccattgcttgaaagttggtgatggcggaaatagtgtgaacccatcatcaattcctcttggatcaaatgtaattttcataaaataaggta |
100 |
Q |
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| T |
3261902 |
ccgctaggatcccattgcttgaaagttggtaatggcggaaatagtgtgaacccatcatcaattcctcttggatcaaatgtaattttcataaaataaggta |
3262001 |
T |
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| Q |
101 |
tgagaaaatatgtaaaaggaaaatttgtagcatccactcatgcatttgaaccaataaacttagattataagttttcacaatttttaacatttatggtgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3262002 |
tgagaaaatatgtaaaaggaaaatttgtagcatccactcatgcatttgaaccaataaacttagattataagttttcacaatttttaacatttatggtgag |
3262101 |
T |
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| Q |
201 |
agnnnnnnnnttcaaatgaatttccgcttcacttgttcat |
240 |
Q |
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| |||||||||||||||||||||||||||||| |
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| T |
3262102 |
a-aaaaaaaattcaaatgaatttccgcttcacttgttcat |
3262140 |
T |
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