View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18947_low_57 (Length: 251)

Name: NF18947_low_57
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18947_low_57
NF18947_low_57
[»] chr5 (46 HSPs)
chr5 (59-235)||(14244938-14245137)
chr5 (59-106)||(13634713-13634760)
chr5 (60-106)||(14245242-14245288)
chr5 (60-106)||(16938481-16938527)
chr5 (59-108)||(1658008-1658057)
chr5 (59-104)||(2550547-2550592)
chr5 (59-108)||(22022847-22022896)
chr5 (59-106)||(10476028-10476075)
chr5 (63-106)||(13634910-13634953)
chr5 (59-106)||(26414895-26414942)
chr5 (1-106)||(7544138-7544242)
chr5 (69-106)||(20147075-20147112)
chr5 (60-108)||(7544332-7544380)
chr5 (71-106)||(5688597-5688632)
chr5 (63-106)||(10204578-10204621)
chr5 (59-106)||(10476223-10476270)
chr5 (69-108)||(34980810-34980849)
chr5 (59-105)||(11757098-11757144)
chr5 (65-103)||(36363233-36363271)
chr5 (70-103)||(11436944-11436977)
chr5 (73-106)||(15986833-15986866)
chr5 (69-106)||(40305672-40305709)
chr5 (69-106)||(40305870-40305907)
chr5 (59-108)||(42681448-42681497)
chr5 (1-45)||(8502973-8503017)
chr5 (1-45)||(9856942-9856986)
chr5 (73-105)||(14681473-14681505)
chr5 (69-105)||(21581152-21581188)
chr5 (1-45)||(22022912-22022956)
chr5 (69-108)||(8551623-8551662)
chr5 (59-106)||(16938674-16938721)
chr5 (59-106)||(28279672-28279719)
chr5 (59-106)||(40815299-40815346)
chr5 (76-106)||(9856892-9856922)
chr5 (64-106)||(15986626-15986668)
chr5 (69-107)||(16501997-16502035)
chr5 (1-38)||(13634780-13634817)
chr5 (1-42)||(16938544-16938585)
chr5 (58-103)||(36363037-36363082)
chr5 (74-103)||(36392359-36392388)
chr5 (1-45)||(10650491-10650535)
chr5 (66-106)||(10650616-10650656)
chr5 (76-104)||(11756882-11756910)
chr5 (1-45)||(11756939-11756983)
chr5 (70-106)||(12035938-12035974)
chr5 (1-45)||(26414955-26414999)
[»] chr7 (43 HSPs)
chr7 (1-106)||(39856003-39856107)
chr7 (59-106)||(1051693-1051740)
chr7 (61-106)||(37925843-37925888)
chr7 (1-105)||(33655246-33655349)
chr7 (63-106)||(36267752-36267795)
chr7 (67-105)||(31364247-31364285)
chr7 (1-106)||(13771084-13771188)
chr7 (1-45)||(41497095-41497139)
chr7 (59-102)||(4833537-4833580)
chr7 (59-106)||(13770950-13770997)
chr7 (59-106)||(31571665-31571712)
chr7 (63-106)||(33519247-33519290)
chr7 (63-106)||(36267555-36267598)
chr7 (69-108)||(37620774-37620813)
chr7 (59-106)||(47390857-47390904)
chr7 (64-106)||(25887194-25887236)
chr7 (60-102)||(40282203-40282245)
chr7 (1-38)||(25887261-25887298)
chr7 (69-106)||(28074105-28074142)
chr7 (69-106)||(41496959-41496996)
chr7 (69-106)||(48881560-48881597)
chr7 (73-106)||(48881758-48881791)
chr7 (1-45)||(24970303-24970347)
chr7 (62-106)||(31553187-31553230)
chr7 (1-45)||(40196670-40196714)
chr7 (59-106)||(18231781-18231828)
chr7 (63-106)||(28074307-28074350)
chr7 (1-36)||(34228456-34228491)
chr7 (59-106)||(40196534-40196581)
chr7 (58-105)||(42306524-42306571)
chr7 (2-45)||(43230298-43230341)
chr7 (78-108)||(24970379-24970409)
chr7 (76-106)||(37417835-37417865)
chr7 (64-106)||(39646471-39646513)
chr7 (60-106)||(47391052-47391098)
chr7 (73-106)||(13425122-13425155)
chr7 (4-45)||(40572375-40572416)
chr7 (59-108)||(47230014-47230063)
chr7 (1-45)||(1051636-1051680)
chr7 (1-45)||(17852933-17852977)
chr7 (77-105)||(26365770-26365798)
chr7 (63-103)||(33519053-33519093)
chr7 (76-104)||(39646671-39646699)
[»] chr1 (33 HSPs)
chr1 (1-106)||(30010334-30010438)
chr1 (1-106)||(12234012-12234116)
chr1 (59-106)||(12234205-12234252)
chr1 (59-106)||(20607412-20607459)
chr1 (63-106)||(26324016-26324059)
chr1 (59-106)||(41498406-41498453)
chr1 (59-105)||(38510089-38510135)
chr1 (66-106)||(1085692-1085732)
chr1 (1-101)||(2859070-2859169)
chr1 (59-106)||(2858934-2858981)
chr1 (59-106)||(30010527-30010574)
chr1 (59-106)||(35349657-35349704)
chr1 (59-106)||(40094935-40094982)
chr1 (63-106)||(51303386-51303429)
chr1 (59-105)||(20576136-20576182)
chr1 (69-106)||(20607225-20607262)
chr1 (73-106)||(26941042-26941075)
chr1 (1-106)||(32951456-32951560)
chr1 (63-104)||(35512996-35513037)
chr1 (61-106)||(38509896-38509941)
chr1 (1-45)||(45585823-45585867)
chr1 (71-106)||(525307-525342)
chr1 (63-106)||(35927816-35927859)
chr1 (62-105)||(40709489-40709532)
chr1 (1-38)||(38510032-38510069)
chr1 (59-104)||(49946783-49946828)
chr1 (1-38)||(51597737-51597774)
chr1 (74-106)||(2470732-2470764)
chr1 (73-105)||(2470934-2470966)
chr1 (5-45)||(10391934-10391974)
chr1 (76-108)||(33643469-33643501)
chr1 (1-33)||(50079522-50079554)
chr1 (1-45)||(50744419-50744463)
[»] chr4 (48 HSPs)
chr4 (59-106)||(49735687-49735734)
chr4 (1-104)||(27735749-27735851)
chr4 (59-105)||(46007896-46007942)
chr4 (60-106)||(54320630-54320676)
chr4 (61-106)||(49735470-49735515)
chr4 (61-106)||(56135751-56135796)
chr4 (61-109)||(27735942-27735990)
chr4 (59-106)||(31348516-31348563)
chr4 (59-106)||(37711318-37711365)
chr4 (59-106)||(54935264-54935311)
chr4 (1-106)||(54935069-54935174)
chr4 (69-106)||(1968564-1968601)
chr4 (1-105)||(5730968-5731072)
chr4 (1-45)||(35248748-35248792)
chr4 (71-106)||(37711140-37711175)
chr4 (59-106)||(41174540-41174587)
chr4 (60-106)||(26166939-26166985)
chr4 (60-106)||(54320437-54320482)
chr4 (59-108)||(6938281-6938330)
chr4 (61-106)||(7977694-7977739)
chr4 (59-108)||(47846251-47846300)
chr4 (69-106)||(53260720-53260757)
chr4 (63-108)||(54576327-54576372)
chr4 (61-106)||(55080581-55080626)
chr4 (1-37)||(36151646-36151682)
chr4 (1-45)||(37711205-37711249)
chr4 (59-106)||(45132690-45132737)
chr4 (75-106)||(45741892-45741923)
chr4 (59-106)||(47433904-47433951)
chr4 (69-103)||(34110803-34110837)
chr4 (63-101)||(35565565-35565603)
chr4 (76-106)||(41174358-41174388)
chr4 (64-106)||(44145775-44145817)
chr4 (8-45)||(1968504-1968541)
chr4 (1-34)||(6891433-6891466)
chr4 (64-105)||(16400803-16400844)
chr4 (69-106)||(22186721-22186758)
chr4 (1-38)||(31348459-31348496)
chr4 (8-45)||(41174407-41174444)
chr4 (71-108)||(47846470-47846507)
chr4 (1-38)||(49735606-49735643)
chr4 (74-106)||(2248011-2248043)
chr4 (1-45)||(26166999-26167043)
chr4 (74-102)||(27775589-27775617)
chr4 (74-106)||(29798290-29798322)
chr4 (5-45)||(45741952-45741992)
chr4 (74-106)||(51329798-51329830)
chr4 (1-45)||(54320496-54320540)
[»] chr6 (35 HSPs)
chr6 (60-106)||(14515475-14515521)
chr6 (65-106)||(15323227-15323268)
chr6 (65-106)||(15353366-15353407)
chr6 (59-106)||(9721140-9721187)
chr6 (59-105)||(9719034-9719080)
chr6 (59-105)||(19278232-19278278)
chr6 (69-106)||(10818231-10818268)
chr6 (1-106)||(12811118-12811222)
chr6 (61-106)||(30487308-30487353)
chr6 (1-45)||(5585440-5585484)
chr6 (59-106)||(10818411-10818458)
chr6 (63-106)||(23090997-23091040)
chr6 (59-105)||(30487500-30487546)
chr6 (59-105)||(31849113-31849159)
chr6 (73-106)||(4097237-4097270)
chr6 (69-106)||(9051737-9051774)
chr6 (4-45)||(33236013-33236054)
chr6 (1-37)||(2893700-2893736)
chr6 (69-105)||(4097718-4097754)
chr6 (58-106)||(9719224-9719272)
chr6 (59-103)||(19278039-19278083)
chr6 (59-106)||(14515666-14515713)
chr6 (74-105)||(21607054-21607085)
chr6 (76-106)||(1300631-1300661)
chr6 (7-45)||(19278182-19278220)
chr6 (61-106)||(665843-665887)
chr6 (67-108)||(1390522-1390563)
chr6 (1-34)||(13583792-13583825)
chr6 (1-34)||(16738134-16738167)
chr6 (63-100)||(23091158-23091195)
chr6 (73-105)||(5585304-5585336)
chr6 (1-37)||(6034210-6034246)
chr6 (1-33)||(26318379-26318411)
chr6 (66-106)||(31798920-31798960)
chr6 (1-45)||(34176397-34176441)
[»] chr2 (39 HSPs)
chr2 (60-106)||(17379848-17379894)
chr2 (1-106)||(36347679-36347783)
chr2 (61-106)||(42296500-42296545)
chr2 (58-106)||(35736177-35736225)
chr2 (60-106)||(9426987-9427033)
chr2 (61-106)||(22356201-22356246)
chr2 (61-106)||(23748292-23748337)
chr2 (1-45)||(19566959-19567003)
chr2 (64-107)||(36046401-36046444)
chr2 (59-106)||(41778775-41778822)
chr2 (60-106)||(17380037-17380083)
chr2 (59-108)||(8427066-8427115)
chr2 (61-106)||(9631757-9631802)
chr2 (1-45)||(2241472-2241516)
chr2 (60-108)||(41841682-41841730)
chr2 (70-105)||(12541773-12541808)
chr2 (59-106)||(15224889-15224936)
chr2 (59-102)||(31061555-31061598)
chr2 (69-100)||(33265615-33265646)
chr2 (63-106)||(35736386-35736429)
chr2 (66-105)||(36567054-36567093)
chr2 (59-106)||(45257502-45257549)
chr2 (72-106)||(40022365-40022399)
chr2 (59-108)||(2241411-2241459)
chr2 (69-106)||(3094558-3094595)
chr2 (1-34)||(16565850-16565883)
chr2 (71-108)||(16713492-16713529)
chr2 (65-106)||(16713726-16713767)
chr2 (69-102)||(31795969-31796002)
chr2 (59-108)||(35531851-35531900)
chr2 (65-106)||(36347543-36347584)
chr2 (72-104)||(2380996-2381028)
chr2 (75-107)||(7681259-7681291)
chr2 (1-45)||(9591973-9592017)
chr2 (2-45)||(12541827-12541871)
chr2 (1-45)||(15224832-15224876)
chr2 (69-105)||(19567021-19567057)
chr2 (1-45)||(40022432-40022476)
chr2 (1-45)||(41778835-41778879)
[»] chr8 (45 HSPs)
chr8 (1-106)||(31543210-31543314)
chr8 (59-102)||(1281149-1281192)
chr8 (65-108)||(28083742-28083785)
chr8 (59-106)||(43732882-43732929)
chr8 (61-106)||(8815338-8815383)
chr8 (70-106)||(43732681-43732717)
chr8 (1-44)||(6315125-6315168)
chr8 (69-104)||(7394666-7394701)
chr8 (63-106)||(12022342-12022385)
chr8 (59-102)||(36309038-36309081)
chr8 (60-106)||(41103506-41103552)
chr8 (69-106)||(2248454-2248491)
chr8 (69-106)||(4247725-4247762)
chr8 (1-106)||(7503092-7503196)
chr8 (69-106)||(9718684-9718721)
chr8 (69-106)||(16024155-16024192)
chr8 (58-106)||(31738617-31738665)
chr8 (1-45)||(42650474-42650518)
chr8 (71-106)||(3726865-3726900)
chr8 (2-45)||(7979202-7979245)
chr8 (71-106)||(13404978-13405013)
chr8 (58-105)||(16653143-16653190)
chr8 (59-102)||(31543078-31543121)
chr8 (2-37)||(37923217-37923252)
chr8 (3-45)||(1026989-1027030)
chr8 (59-105)||(16024348-16024394)
chr8 (60-106)||(40990380-40990425)
chr8 (1-35)||(41103644-41103678)
chr8 (69-106)||(1027053-1027090)
chr8 (69-102)||(2481978-2482011)
chr8 (4-37)||(3726996-3727029)
chr8 (73-106)||(6315068-6315101)
chr8 (69-106)||(8815143-8815180)
chr8 (69-106)||(11033421-11033458)
chr8 (1-34)||(11575544-11575577)
chr8 (59-104)||(11575601-11575646)
chr8 (69-106)||(30365132-30365169)
chr8 (61-106)||(34634340-34634385)
chr8 (69-105)||(2412967-2413003)
chr8 (1-45)||(12022281-12022325)
chr8 (1-45)||(16653011-16653055)
chr8 (70-102)||(33922531-33922563)
chr8 (1-37)||(37032449-37032485)
chr8 (70-106)||(40632998-40633034)
chr8 (62-106)||(44119744-44119788)
[»] chr3 (40 HSPs)
chr3 (1-106)||(25655110-25655214)
chr3 (60-106)||(24560219-24560265)
chr3 (61-102)||(27541937-27541978)
chr3 (1-105)||(18654738-18654842)
chr3 (1-45)||(21773844-21773888)
chr3 (58-105)||(6803395-6803442)
chr3 (59-106)||(28582704-28582751)
chr3 (63-106)||(34641189-34641232)
chr3 (59-106)||(41110323-41110370)
chr3 (69-104)||(55428584-55428619)
chr3 (59-104)||(10748299-10748344)
chr3 (64-105)||(21090271-21090312)
chr3 (69-106)||(24253723-24253760)
chr3 (73-106)||(37102348-37102381)
chr3 (1-37)||(651801-651837)
chr3 (1-45)||(10748435-10748479)
chr3 (1-45)||(30200229-30200273)
chr3 (64-108)||(42772044-42772088)
chr3 (1-45)||(46204948-46204992)
chr3 (59-106)||(5903551-5903598)
chr3 (69-104)||(17474411-17474446)
chr3 (69-104)||(31664391-31664426)
chr3 (69-104)||(31931970-31932005)
chr3 (71-106)||(54574563-54574598)
chr3 (72-106)||(651742-651776)
chr3 (1-35)||(2387898-2387932)
chr3 (69-103)||(9312674-9312708)
chr3 (70-108)||(14897895-14897933)
chr3 (59-105)||(28581189-28581235)
chr3 (76-106)||(34641004-34641034)
chr3 (64-106)||(44412363-44412405)
chr3 (70-103)||(14897981-14898014)
chr3 (69-106)||(24253927-24253964)
chr3 (59-108)||(26135992-26136041)
chr3 (1-37)||(14898046-14898082)
chr3 (5-45)||(24560279-24560319)
chr3 (1-45)||(41110459-41110503)
chr3 (70-106)||(41110527-41110563)
chr3 (64-108)||(44412561-44412605)
chr3 (76-104)||(46978441-46978469)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-106)||(39328-39432)
[»] scaffold0198 (1 HSPs)
scaffold0198 (59-105)||(3150-3196)
[»] scaffold0026 (1 HSPs)
scaffold0026 (59-105)||(1175-1221)
[»] scaffold0096 (1 HSPs)
scaffold0096 (59-106)||(6586-6633)
[»] scaffold0012 (2 HSPs)
scaffold0012 (76-106)||(184613-184643)
scaffold0012 (59-104)||(184802-184847)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-38)||(16434-16471)
[»] scaffold0240 (1 HSPs)
scaffold0240 (69-106)||(17743-17780)
[»] scaffold0071 (1 HSPs)
scaffold0071 (74-106)||(52898-52930)
[»] scaffold0027 (1 HSPs)
scaffold0027 (80-108)||(121985-122013)


Alignment Details
Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 14245137 - 14244938
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt--------gcatataccacttctgctctatgatttctaataaccaggccc 150  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  14245137 taaatcctcccctcccttcccctcctaaaccctcaatccaaacacacccttagaggctgcatataccacttctgctctatgatttctaataaccaggccc 14245038  T
Q  151 caaaacacctgcctgtcgcgtcc---------------gttcaccttgagaaaattctccagaggggcttcccaagagagctggattgcactgttagtga 235  Q
    |||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14245037 caaaacacctgcctgtcgcgtccgttgcctgcatcaatgttcaccttgagaaaattctccagaggggcttcccaagagagctggattgcactgttagtga 14244938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 13634760 - 13634713
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13634760 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 14245242 - 14245288
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14245242 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 16938527 - 16938481
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16938527 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 16938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 1658008 - 1658057
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1658008 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacctt 1658057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 2550547 - 2550592
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  2550547 taaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 22022896 - 22022847
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  22022896 taaatcctctcctccattcccctcctaaaccctcaatccaaacacacctt 22022847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 10476075 - 10476028
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10476075 taaaccctctcatcccttcccctcctaaaccctcaattcaaacacacc 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 13634910 - 13634953
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  13634910 ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 26414942 - 26414895
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  26414942 taaaccctcccctcccttctcctcctaaaccctcaatccaaacacacc 26414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7544242 - 7544138
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||            |||  ||||| ||||||||||| ||||||||||||||||||||    
T  7544242 acacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaatttag-ccctcccctcccttcccttcctaaaccctcaatccaaa 7544144  T
Q  101 cacacc 106  Q
    ||||||    
T  7544143 cacacc 7544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 20147075 - 20147112
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20147075 cctcccttcccctcctaaaccctcaatccaaacacacc 20147112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 7544332 - 7544380
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  7544332 aaaccctccccttccttcccctcctaaaccctccatccaaacacacctt 7544380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 5688597 - 5688632
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  5688597 tcccttcccctcctaaaccctcaatccaaacacacc 5688632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 10204621 - 10204578
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  10204621 ccctcacctcccttcccctcctaaaccctcgatccaaacacacc 10204578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 10476223 - 10476270
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  10476223 taaacactcccctcccttcccctcctaaaccctccatccaaacacacc 10476270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 34980849 - 34980810
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34980849 cctcccttcccctcctaaaccttcaatccaaacacacctt 34980810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 11757098 - 11757144
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  11757098 taaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 36363233 - 36363271
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacac 103  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  36363233 ctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 11436977 - 11436944
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacac 103  Q
    ||||||||||||||||||||||||||||||||||    
T  11436977 ctcccttcccctcctaaaccctcaatccaaacac 11436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 15986833 - 15986866
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||    
T  15986833 ccttcccctcctaaaccctcaatccaaacacacc 15986866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 40305709 - 40305672
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40305709 cctcccttcccctcctaaaccctccatccaaacacacc 40305672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 40305870 - 40305907
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  40305870 cctcccttctcctcctaaaccctcaatccaaacacacc 40305907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 42681497 - 42681448
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||||    
T  42681497 taaatcctcccctcctttcccctcttaaaccctcaatccaaacacacctt 42681448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8502973 - 8503017
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||    
T  8502973 acacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9856986 - 9856942
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||    
T  9856986 acacttgatttattttagaaaaacatgttatatagtccttaattt 9856942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 21581152 - 21581188
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21581152 cctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22022956 - 22022912
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||    
T  22022956 acacttaatttattttagaaaaatatgttatatagtccgtaattt 22022912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 8551623 - 8551662
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  8551623 cctctcttcccctcctaaaccttcaatccaaacacacctt 8551662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 16938674 - 16938721
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||| |||| ||||||||||||| |||||||||||||    
T  16938674 taaaccctcccctccattcctctcctaaaccctccatccaaacacacc 16938721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 28279672 - 28279719
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||  || || |||||||||||||||||    
T  28279672 taaaccctctcctcccttccccttatagactctcaatccaaacacacc 28279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 40815346 - 40815299
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||||| ||||||||||||||||| | ||||||||||||||||    
T  40815346 taaatcctctcttcccttcccctcctaaatcttcaatccaaacacacc 40815299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 9856922 - 9856892
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  9856922 tcccctcctaaaccctcaatccaaacacacc 9856892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 15986668 - 15986626
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  15986668 cctcccctcccttcccctcctaaaccctctttccaaacacacc 15986626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 16501997 - 16502035
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacct 107  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  16501997 cctctctttccctcctaaaccctcaatccaaacacacct 16502035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13634817 - 13634780
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13634817 acacataatttattttagaaaaacatgttatatagtcc 13634780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16938585 - 16938544
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaa 42  Q
    ||||||||||||||||||| |||||| ||||||||||| |||    
T  16938585 acacttaatttattttagagaaacatgttatatagtccgtaa 16938544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 36363082 - 36363037
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacac 103  Q
    |||||| ||| ||||| ||||||| |||||||||||||||||||||    
T  36363082 ttaaactctcccctccattccccttctaaaccctcaatccaaacac 36363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Original strand, 36392359 - 36392388
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacac 103  Q
    ||||||||||||||||||||||||||||||    
T  36392359 cttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10650535 - 10650491
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||||| |||  |||| ||||||    
T  10650535 acacttaatttattttagaaaaacatttcatagtgtccgtaattt 10650491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 10650616 - 10650656
Alignment:
Q  66 tctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  10650616 tctcctcccttcccctcccaaactttcaatccaaacacacc 10650656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 11756910 - 11756882
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||||||||||||||||||    
T  11756910 tcccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11756983 - 11756939
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||| |||||| ||||||||| | ||||||    
T  11756983 acacttaatttattttagagaaacatgttatatagttcgtaattt 11756939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 12035974 - 12035938
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||| || |||||||||||||    
T  12035974 ctcccttcccctcctaaaccatctatccaaacacacc 12035938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26414999 - 26414955
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||    
T  26414999 acacttaatatattttagaaaaacatgtcatatagtccgtaattt 26414955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39856003 - 39856107
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||            | |||||||| ||||||||||||||||||||||||||||||||    
T  39856003 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt-aaaccctcccctcccttcccctcctaaaccctcaatccaaa 39856101  T
Q  101 cacacc 106  Q
    ||||||    
T  39856102 cacacc 39856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 1051693 - 1051740
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  1051693 taaatcctctcctcccttcccctcctaaaccctcaatccaaacacacc 1051740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 37925888 - 37925843
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37925888 aaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 37925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33655246 - 33655349
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| |||||||| || ||||||            | |||||||| |||| |||||||||||||||||||||||||||    
T  33655246 acacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagt-aaaccctcgcctctcttcccctcctaaaccctcaatccaaa 33655344  T
Q  101 cacac 105  Q
    |||||    
T  33655345 cacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 36267752 - 36267795
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  36267752 ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 36267795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 31364247 - 31364285
Alignment:
Q  67 ctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31364247 ctcctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13771084 - 13771188
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||            | |||| ||| |||||||||||||||||||||||||||| |||    
T  13771084 acacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagt-aaactctcacctcccttcccctcctaaaccctcaatctaaa 13771182  T
Q  101 cacacc 106  Q
    ||||||    
T  13771183 cacacc 13771188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41497095 - 41497139
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  41497095 acacttaatttattttagaaaaacatgttatatagtccgtaattt 41497139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 4833580 - 4833537
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  4833580 taaaccctcccctcccttcccctcctaaaccctccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 13770997 - 13770950
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  13770997 taaatcctcccctcccttcccctcctaaatcctcaatccaaacacacc 13770950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 31571665 - 31571712
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  31571665 taaactctcccctcgcttcccctcctaaaccctcaatccaaacacacc 31571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 33519247 - 33519290
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  33519247 ccctcccctcccttcccctcctaaaccctccatccaaacacacc 33519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 36267598 - 36267555
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  36267598 ccctcccctcccttcccctcctaaaccctccatccaaacacacc 36267555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 37620813 - 37620774
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37620813 cctcccttcccctcccaaaccctcaatccaaacacacctt 37620774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 47390904 - 47390857
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||||    
T  47390904 taaaccctccactcccttcccctcctaacccctcaatccaaacacacc 47390857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 25887236 - 25887194
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacacc 25887194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 40282245 - 40282203
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  40282245 aaaccctcctctcccttcccctcctaaaccctcaatccaaaca 40282203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25887298 - 25887261
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25887298 acacttaatttattttagaaaaacatgttatatagtcc 25887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 28074142 - 28074105
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28074142 cctcccttcccctcctaaaccttcaatccaaacacacc 28074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 41496996 - 41496959
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41496996 cctcccttcccctcctaaaccctccatccaaacacacc 41496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 48881597 - 48881560
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48881597 cctcccttcccctcctaaaccctccatccaaacacacc 48881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 48881758 - 48881791
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacacc 48881791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24970303 - 24970347
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  24970303 acacttaatttattttagaaaaacatgttatataatccataattt 24970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 31553230 - 31553187
Alignment:
Q  62 accctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  31553230 accctctcctcccttcccctcctaaa-cctccatccaaacacacc 31553187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40196670 - 40196714
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  40196670 acacttaatttattttagaaaaacatgttatatattccgtaattt 40196714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 18231781 - 18231828
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||||    
T  18231781 taaatcctcccctcccttcccctcctaaacgctccatccaaacacacc 18231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 28074307 - 28074350
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||    
T  28074307 ccctccccttccttcctctcctaaaccctcaatccaaacacacc 28074350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34228456 - 34228491
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagt 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  34228456 acacttaatttattttagaaaaacatgttatatagt 34228491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 40196581 - 40196534
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||  |||||||||||||| |||||||| |||||||||||||    
T  40196581 taaaccctcctctcccttcccctcccaaaccctccatccaaacacacc 40196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 42306524 - 42306571
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||| || ||||  |||||||||||||||||||||||||||||||    
T  42306524 ttaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 43230341 - 43230298
Alignment:
Q  2 cacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  43230341 cacttaatttattttagaaaaacatgttatataatccgtaattt 43230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 24970379 - 24970409
Alignment:
Q  78 ccctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||||||||||||||||||||||||||    
T  24970379 ccctcctaaaccctcaatccaaacacacctt 24970409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 37417835 - 37417865
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacacc 37417865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 39646513 - 39646471
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||||||||| |||||||||| ||||||||||||||||    
T  39646513 cctcccctcccttcctctcctaaaccgtcaatccaaacacacc 39646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 47391052 - 47391098
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||| |||||||||||||| ||||||||| |||||||||||||    
T  47391052 aaactctcccctcccttcccctcttaaaccctccatccaaacacacc 47391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 13425155 - 13425122
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||| |||||||||||||    
T  13425155 ccttcccctcctaaaccctctatccaaacacacc 13425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40572375 - 40572416
Alignment:
Q  4 cttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||| |||||| ||||||||||| ||||||    
T  40572375 cttaatttattttagagaaacatattatatagtccgtaattt 40572416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 47230014 - 47230063
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||| ||||||||  ||||||||||||||||| ||||||||||||    
T  47230014 taaatcctcccctcccttttcctcctaaaccctcaattcaaacacacctt 47230063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1051636 - 1051680
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||  ||||||||| | ||||||    
T  1051636 acacttaatttattttagaaaaacaggttatatagttcgtaattt 1051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17852977 - 17852933
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| |||| || ||| ||||||    
T  17852977 acacttaatttattttagaaaaacatgttatttaatccgtaattt 17852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 105
Target Start/End: Complemental strand, 26365798 - 26365770
Alignment:
Q  77 cccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||||||||||||||||||    
T  26365798 cccctcctaaaccctcaatccaaacacac 26365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 33519093 - 33519053
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacac 103  Q
    ||||| ||||||||||||||||||| |||| ||||||||||    
T  33519093 ccctcccctcccttcccctcctaaaacctccatccaaacac 33519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 39646671 - 39646699
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||||||||||||||||||    
T  39646671 tcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30010438 - 30010334
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||            | ||| |||| ||||||||||||||||||||||||||||||||    
T  30010438 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagt-aaatcctcccctcccttcccctcctaaaccctcaatccaaa 30010340  T
Q  101 cacacc 106  Q
    ||||||    
T  30010339 cacacc 30010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12234116 - 12234012
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||            |||| ||||  ||||||||||||||||||||||||||||||||    
T  12234116 acacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaa-ttaagccctaccctcccttcccctcctaaaccctcaatccaaa 12234018  T
Q  101 cacacc 106  Q
    ||||||    
T  12234017 cacacc 12234012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 12234205 - 12234252
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12234205 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 20607412 - 20607459
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  20607412 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 20607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 26324059 - 26324016
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 26324016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 41498453 - 41498406
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  41498453 taaaccctcccctcacttcccctcctaaaccctcaatccaaacacacc 41498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 38510089 - 38510135
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  38510089 taaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 1085692 - 1085732
Alignment:
Q  66 tctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  1085692 tctcctcccttcccctcctaaaccctctatccaaacacacc 1085732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2859070 - 2859169
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||            | |||||||| ||||||||||||||||||||| ||||||||||    
T  2859070 acacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagt-aaaccctcccctcccttcccctcctaaaccttcaatccaaa 2859168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 2858981 - 2858934
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  2858981 taaaccctcccctccctttccctcctaaaccctccatccaaacacacc 2858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 30010527 - 30010574
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  30010527 taaaccctcccctcccttccccttctaaaccctccatccaaacacacc 30010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 35349657 - 35349704
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  35349657 taaaccctcccctcccttcccctcataaacccttaatccaaacacacc 35349704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 40094982 - 40094935
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  40094982 taaaccctccccttccttcccctcctaaaccctccatccaaacacacc 40094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 51303429 - 51303386
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  51303429 ccctcccctcccctcccctcctaaaccctcaatccaaacacacc 51303386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 20576182 - 20576136
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  20576182 taaactctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 20607262 - 20607225
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  20607262 cctcccttcccctcctaaaccctcaattcaaacacacc 20607225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 26941042 - 26941075
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacacc 26941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32951456 - 32951560
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| || |||||||| ||||||             ||||| ||| |||||||||| ||||||||| |||||||||||    
T  32951456 acacttaatttattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaag-taaactctcccctcccttcctctcctaaactctcaatccaaa 32951554  T
Q  101 cacacc 106  Q
    ||||||    
T  32951555 cacacc 32951560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 35512996 - 35513037
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  35512996 ccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 38509941 - 38509896
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||    
T  38509941 aaccctcctctcccttcccctcctaaaccctctatccaaacacacc 38509896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45585823 - 45585867
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||    
T  45585823 acacttaatttattttaaaaaaacatgttatatagtccgtaattt 45585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 525307 - 525342
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  525307 tcccttcccgtcctaaaccctcaatccaaacacacc 525342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 35927859 - 35927816
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  35927859 ccctcccctccattcccctcctaaaacctcaatccaaacacacc 35927816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 40709489 - 40709532
Alignment:
Q  62 accctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||    
T  40709489 accctcccctccgttcccctcctaaatcctcaatccaaacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38510032 - 38510069
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  38510032 acacttgatttattttagaaaaacatgttatatagtcc 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 49946783 - 49946828
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||    
T  49946783 taaaccctcacatcccttccccgcctaatccctcaatccaaacaca 49946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51597774 - 51597737
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  51597774 acacttaatttattttaaaaaaacatgttatatagtcc 51597737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 2470764 - 2470732
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||| |||||||||||||    
T  2470764 cttcccctcctaaaccctccatccaaacacacc 2470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Original strand, 2470934 - 2470966
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||||||||||| |||||||||||||||    
T  2470934 ccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 10391974 - 10391934
Alignment:
Q  5 ttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  10391974 ttaatttattttagaaaaacatgtaatatagtccgtaattt 10391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 33643469 - 33643501
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||||||||||| |||||||||||||||    
T  33643469 tcccctcctaaaccctctatccaaacacacctt 33643501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50079522 - 50079554
Alignment:
Q  1 acacttaatttattttagaaaaacattttatat 33  Q
    ||||||||||||||||| |||||||||||||||    
T  50079522 acacttaatttattttaaaaaaacattttatat 50079554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50744419 - 50744463
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||| |||| | ||||||||||| ||||||    
T  50744419 acacttaatttattttagagaaacctgttatatagtccgtaattt 50744463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 49735687 - 49735734
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49735687 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 27735851 - 27735749
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||            |||||||||||| |||||||||||||||||||||| |||||||    
T  27735851 acacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaa-ttaaaccctctcttcccttcccctcctaaaccctcgatccaaa 27735753  T
Q  101 caca 104  Q
    ||||    
T  27735752 caca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 46007896 - 46007942
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  46007896 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 54320630 - 54320676
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  54320630 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 54320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 49735515 - 49735470
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  49735515 aaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 56135796 - 56135751
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  56135796 aaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 56135751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 27735942 - 27735990
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacaccttg 109  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  27735942 aaccctatcctcccttcccctcctaaaccctccatccaaacacaccttg 27735990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 31348516 - 31348563
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  31348516 taaaccctcccctcccttcccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 37711318 - 37711365
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  37711318 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 37711365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 54935264 - 54935311
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  54935264 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 54935311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 54935174 - 54935069
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcc-tcccttcccctcctaaaccctcaatccaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||            | |||||||| || |||||||||||||||||||||||||||||    
T  54935174 acacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagt-aaaccctccccctcccttcccctcctaaaccctcaatccaa 54935076  T
Q  100 acacacc 106  Q
    |||||||    
T  54935075 acacacc 54935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 1968564 - 1968601
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1968564 cctcccttcccctcctaaaccctcaatccaaacacacc 1968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5730968 - 5731072
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||              |||| ||| ||||||||||||||||||||||||||| ||||    
T  5730968 acacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaaaccctcaattcaaa 5731067  T
Q  101 cacac 105  Q
    |||||    
T  5731068 cacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35248792 - 35248748
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  35248792 acacttaatttattttagaaaaacatgttatatagtccgtaattt 35248748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 37711175 - 37711140
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  37711175 tcccttcccctcctaaaccctcaatccaaacacacc 37711140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 41174540 - 41174587
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||    
T  41174540 taaaccatcccctcccttcccctcctaaaccctccatccaaacacacc 41174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 26166985 - 26166939
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  26166985 aaactctcccctccattcccctcctaaaccctcaatccaaacacacc 26166939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 54320482 - 54320437
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  54320482 aaaccctc-cctccctttccctcctaaaccctcaatccaaacacacc 54320437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 6938330 - 6938281
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  6938330 taaatcctctcctcccttcccctcctaaatcatcaatccaaacaaacctt 6938281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 7977694 - 7977739
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||||    
T  7977694 aaccctcccctcctttcccctcataaaccctcaatccaaacacacc 7977739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 47846251 - 47846300
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  47846251 taaaccctcccatcccttctcctcttaaaccctcaatccaaacacacctt 47846300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 53260757 - 53260720
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||| |||||||||||||    
T  53260757 cctcccttcccctcctaaaccctccatccaaacacacc 53260720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 54576372 - 54576327
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||    
T  54576372 ccctcccctcccttccccttctaaaccctccatccaaacacacctt 54576327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 55080626 - 55080581
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||    
T  55080626 aaccatctcctctcttcctctcctaaaccctcaatccaaacacacc 55080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36151682 - 36151646
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  36151682 acacttaatttattttagaaaaacatgttatatagtc 36151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37711249 - 37711205
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||    
T  37711249 acacttaatttattttagagaaacatgttatatagtccgtaattt 37711205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 45132690 - 45132737
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| ||||||| ||||||||||||||| |||||| ||||||||||    
T  45132690 taaaccatctcctctcttcccctcctaaactctcaattcaaacacacc 45132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 106
Target Start/End: Complemental strand, 45741923 - 45741892
Alignment:
Q  75 ttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||    
T  45741923 ttcccctcctaaaccctcaatccaaacacacc 45741892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 47433904 - 47433951
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||||    
T  47433904 taaaccctcctctcccttcccctcctaaaccgtcaacccaaacacacc 47433951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 34110837 - 34110803
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacac 103  Q
    |||| ||||||||||||||||||||||||||||||    
T  34110837 cctctcttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 35565603 - 35565565
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaac 101  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  35565603 ccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 41174388 - 41174358
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  41174388 tcccctcctaaaccctcaatccaaacacacc 41174358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 44145817 - 44145775
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||||||||||||||||| | ||||||||||||||    
T  44145817 cctcccctcccttcccctcctaaaccttgaatccaaacacacc 44145775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 1968504 - 1968541
Alignment:
Q  8 atttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  1968504 atttattttagaaaaacatattatatagtccgtaattt 1968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6891466 - 6891433
Alignment:
Q  1 acacttaatttattttagaaaaacattttatata 34  Q
    |||||||||||||||||||||||||| |||||||    
T  6891466 acacttaatttattttagaaaaacatgttatata 6891433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 16400844 - 16400803
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||| ||||||||| ||||||||||||||||||||| |||||    
T  16400844 cctcccctcccttctcctcctaaaccctcaatccaatcacac 16400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 22186758 - 22186721
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  22186758 cctcccttcccttcctaaaccctcaatccaaatacacc 22186721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31348459 - 31348496
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  31348459 acacataatttattttagaaaaacatgttatatagtcc 31348496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 41174444 - 41174407
Alignment:
Q  8 atttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||  |||||||||||||||||    
T  41174444 atttattttagaaaaacatgctatatagtccctaattt 41174407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 47846470 - 47846507
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  47846470 tcccttctcctcttaaaccctcaatccaaacacacctt 47846507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49735606 - 49735643
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  49735606 acacttgatttattttagaaaaacatgttatatagtcc 49735643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 2248011 - 2248043
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||||||||||||||||||||||||    
T  2248011 cttctcctcctaaaccctcaatccaaacacacc 2248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26167043 - 26166999
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||| |||||| ||||||||||  ||||||    
T  26167043 acacttaatttattttagagaaacatgttatatagtctgtaattt 26166999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 102
Target Start/End: Complemental strand, 27775617 - 27775589
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaaca 102  Q
    |||||||||||||||||||||||||||||    
T  27775617 cttcccctcctaaaccctcaatccaaaca 27775589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 29798322 - 29798290
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||| ||||||||||||||||    
T  29798322 cttcccctcctaaaccatcaatccaaacacacc 29798290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45741992 - 45741952
Alignment:
Q  5 ttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  45741992 ttaatttattttagaaaaacaagttatatagtccgtaattt 45741952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 51329830 - 51329798
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||| |||||||||||||||||    
T  51329830 cttcccctcctaaactctcaatccaaacacacc 51329798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54320540 - 54320496
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||||||||||  |||||||||  ||||||    
T  54320540 acacttaatttattttagaaaaacatgatatatagtcggtaattt 54320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 14515521 - 14515475
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14515521 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 15323268 - 15323227
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15323268 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 15323227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 15353407 - 15353366
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15353407 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 15353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 9721187 - 9721140
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  9721187 taaaccctcccctcccttcccctcctaaaccttcaatccaaacacacc 9721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 9719080 - 9719034
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||    
T  9719080 taaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 19278232 - 19278278
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  19278232 taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 10818268 - 10818231
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10818268 cctcccttcccctcctaaaccctcaatccaaacacacc 10818231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12811118 - 12811222
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||             ||| ||||| |||| |||||| ||||||||||||||||||||    
T  12811118 acacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaag-taatccctcccctctcttcccatcctaaaccctcaatccaaa 12811216  T
Q  101 cacacc 106  Q
    ||||||    
T  12811217 cacacc 12811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 30487353 - 30487308
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  30487353 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 30487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5585440 - 5585484
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  5585440 acacttaatttattttagaaaaacatgttatatagtccgtaattt 5585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 10818411 - 10818458
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  10818411 taaaccctcccctccctacccctcctaaactctcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 23091040 - 23090997
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||    
T  23091040 ccctcccctcccttcccctcctaaaccttcaatccaaacacacc 23090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 30487500 - 30487546
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||    
T  30487500 taaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 31849159 - 31849113
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||    
T  31849159 taaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 4097270 - 4097237
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacacc 4097237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 9051737 - 9051774
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9051737 cctcccttcccctcttaaaccctcaatccaaacacacc 9051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 33236054 - 33236013
Alignment:
Q  4 cttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  33236054 cttaatttattttagaaaaacatgttatatagtccgtaattt 33236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2893736 - 2893700
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  2893736 acacttaatttattttagaaaaacatgttatatagtc 2893700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 4097718 - 4097754
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4097718 cctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 9719224 - 9719272
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| | |||| ||||||||| |||||||||||||||||||||||    
T  9719224 ttaaacccacccctctcttcccctcataaaccctcaatccaaacacacc 9719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 19278083 - 19278039
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacac 103  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||    
T  19278083 taaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 14515666 - 14515713
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| | | |||||||||||||||||||| |||||||||||||    
T  14515666 taaaccctccctttccttcccctcctaaaccctccatccaaacacacc 14515713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 105
Target Start/End: Original strand, 21607054 - 21607085
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||||||||||||||||||||||||||    
T  21607054 cttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 1300661 - 1300631
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  1300661 tcccctcctaaaccctcaatccaaacacacc 1300631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 19278182 - 19278220
Alignment:
Q  7 aatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  19278182 aatttattttagaaaaacatgttatatagtccgtaattt 19278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 665887 - 665843
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| |||| ||||||||||||||||||| |||||||||||||    
T  665887 aaccctcccctcacttcccctcctaaaccctc-atccaaacacacc 665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 1390522 - 1390563
Alignment:
Q  67 ctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||| |||||||||||||||||  |||||||||||||||    
T  1390522 ctcctccattcccctcctaaacccttcatccaaacacacctt 1390563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13583825 - 13583792
Alignment:
Q  1 acacttaatttattttagaaaaacattttatata 34  Q
    |||||||||||||||||||||||||| |||||||    
T  13583825 acacttaatttattttagaaaaacatgttatata 13583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16738134 - 16738167
Alignment:
Q  1 acacttaatttattttagaaaaacattttatata 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  16738134 acacttactttattttagaaaaacattttatata 16738167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 23091158 - 23091195
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  23091158 ccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 5585336 - 5585304
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||||||||||||||| ||||||||||||    
T  5585336 ccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6034210 - 6034246
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  6034210 acacttaatttattttagaaaaacatgttatacagtc 6034246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26318411 - 26318379
Alignment:
Q  1 acacttaatttattttagaaaaacattttatat 33  Q
    ||||||||||||||||| |||||||||||||||    
T  26318411 acacttaatttattttaaaaaaacattttatat 26318379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 31798960 - 31798920
Alignment:
Q  66 tctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| |||  ||||||||||||||||||||||||||||    
T  31798960 tctcctctcttatcctcctaaaccctcaatccaaacacacc 31798920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34176441 - 34176397
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  34176441 acacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17379894 - 17379848
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17379894 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 17379848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36347679 - 36347783
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||             ||||| ||| | ||||||||||||||||||||||||||||||    
T  36347679 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaag-taaactctcccttcccttcccctcctaaaccctcaatccaaa 36347777  T
Q  101 cacacc 106  Q
    ||||||    
T  36347778 cacacc 36347783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 42296500 - 42296545
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  42296500 aaccctctcctcccttcccctcctaatccctcaatccaaacacacc 42296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 35736225 - 35736177
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  35736225 ttaacccctcccctcccttcccctcctaaaccctcaatccaaacacacc 35736177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 9427033 - 9426987
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  9427033 aaaccctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 22356201 - 22356246
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22356201 aaccctcccctcccttcccctcctaaatcctcaatccaaacacacc 22356246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 23748292 - 23748337
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  23748292 aaccctcccctcccttcccctcctaaaccctccatccaaacacacc 23748337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19566959 - 19567003
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  19566959 acacttaatttattttagaaaaacatgttatatagtccgtaattt 19567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 36046401 - 36046444
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacct 107  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacct 36046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 41778822 - 41778775
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  41778822 taaaccctcccctccctttcccttctaaaccctcaatccaaacacacc 41778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 17380037 - 17380083
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||    
T  17380037 aaaccatcccctcacttcccctcctaaaccctcaatccaaacacacc 17380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 8427066 - 8427115
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||| ||||    
T  8427066 taaactctcccctccctttccctcctaaaccctcaatccaaacacgcctt 8427115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 9631757 - 9631802
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||||    
T  9631757 aaccctcttctccctttccctcctaaaccctccatccaaacacacc 9631802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2241516 - 2241472
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||    
T  2241516 acacttaatttattttagaaaaacgtattatatagtccgtaattt 2241472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 41841730 - 41841682
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||||||    
T  41841730 aaaccctcccatccctttccctcctaaatcctcaatccaaacacacctt 41841682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 12541808 - 12541773
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12541808 ctcccctcccctcctaaaccctcaatccaaacacac 12541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 15224889 - 15224936
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| || |||||||||||||||||||||||  |||||||||||||    
T  15224889 taaaccatcccctcccttcccctcctaaacccttgatccaaacacacc 15224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 31061555 - 31061598
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  31061555 taaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 33265646 - 33265615
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||||||||||||||||||||||||||||||    
T  33265646 cctcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 35736386 - 35736429
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||    
T  35736386 ccctcccctcccttcacctcctaaaccctccatccaaacacacc 35736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 36567054 - 36567093
Alignment:
Q  66 tctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  36567054 tctcctctattcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 45257502 - 45257549
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| |||||||||||||| ||||||| |||| |||||||||||||    
T  45257502 taaaccatctcctcccttcccatcctaaaacctccatccaaacacacc 45257549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 40022399 - 40022365
Alignment:
Q  72 cccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||||||||||    
T  40022399 cccttaccctcctaaaccctcaatccaaacacacc 40022365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 2241459 - 2241411
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||||||||    
T  2241459 taaactctcccctcccttcccctcct-aaccctcaatctaaacacacctt 2241411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 3094558 - 3094595
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| || ||||||||||||||||||||||||||    
T  3094558 cctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16565883 - 16565850
Alignment:
Q  1 acacttaatttattttagaaaaacattttatata 34  Q
    |||||||||||||||||||||||||| |||||||    
T  16565883 acacttaatttattttagaaaaacatgttatata 16565850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 16713529 - 16713492
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  16713529 tcccttcccctcttaaaccctcaatcaaaacacacctt 16713492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 16713726 - 16713767
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||  |||||||||||| |||||||||||||    
T  16713726 ctctcctcccttcctttcctaaaccctccatccaaacacacc 16713767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 31795969 - 31796002
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||||||||||||||| ||||||||||||    
T  31795969 cctcccttcccctcctaaaccttcaatccaaaca 31796002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 35531851 - 35531900
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||| |||||| |||||||||||| |||  |||||||||||||||    
T  35531851 taaaccctcccctcccctcccctcctaaaaccttcatccaaacacacctt 35531900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 36347584 - 36347543
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||  |||||||||||||    
T  36347584 ctctcttcccttcccctcctaaacccttcatccaaacacacc 36347543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 2381028 - 2380996
Alignment:
Q  72 cccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||||||||||||||| |||||||||||    
T  2381028 cccttcccctcctaaaccctctatccaaacaca 2380996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 7681291 - 7681259
Alignment:
Q  75 ttcccctcctaaaccctcaatccaaacacacct 107  Q
    ||||||||||||||||| |||||||||||||||    
T  7681291 ttcccctcctaaaccctaaatccaaacacacct 7681259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9591973 - 9592017
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaattt 9592017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 12541871 - 12541827
Alignment:
Q  2 cacttaatttattttaga-aaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||    
T  12541871 cacttaatttattttagaaaaaatattttatatagtccgtaattt 12541827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15224832 - 15224876
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||| ||||||||||| |||||||| || ||||||    
T  15224832 acacttaatttattctagaaaaacatgttatatagcccgtaattt 15224876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 19567021 - 19567057
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  19567021 cctcccctcctctcctaaaccctcaatccaaacacac 19567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40022476 - 40022432
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||| |||||||| ||||||||| | ||||||    
T  40022476 acacttaatttattttacaaaaacatgttatatagttcataattt 40022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41778879 - 41778835
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||||    
T  41778879 acacttaatttattttaaaaaaacattttatactgtccataattt 41778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31543210 - 31543314
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||            | |||||||| |||||||||||||||||||||||||||| |||    
T  31543210 acacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagt-aaaccctcccctcccttcccctcctaaaccctcaatcgaaa 31543308  T
Q  101 cacacc 106  Q
    ||||||    
T  31543309 cacacc 31543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 1281192 - 1281149
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  1281192 taaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 28083785 - 28083742
Alignment:
Q  65 ctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  28083785 ctctcctcccttcccctcctaaaccctcaatccgaacacacctt 28083742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 43732882 - 43732929
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  43732882 taaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 43732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 8815338 - 8815383
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  8815338 aaccctcccctccctccccctcctaaaccctcaatccaaacacacc 8815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 43732717 - 43732681
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||||||||    
T  43732717 ctcccttcccctcctaaaccctcaatccaaacacacc 43732681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6315168 - 6315125
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatt 44  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  6315168 acacttaatttattttagaaaaacatgttatatagtccgtaatt 6315125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 7394666 - 7394701
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  7394666 cctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 12022342 - 12022385
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||    
T  12022342 ccctcccctcctttcccctcctaaaccctcaatccaaacacacc 12022385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 36309038 - 36309081
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  36309038 taaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 41103552 - 41103506
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  41103552 aaaccctcccctctcttcccctcctaaaccctccatccaaacacacc 41103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 2248491 - 2248454
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2248491 cctcccttcccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 4247725 - 4247762
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacacc 4247762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7503092 - 7503196
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||             ||||||||| |||||| |||||||| ||| ||||||||||||    
T  7503092 acacttaatttattttagaaaaacatgttatataatccataatttaaaaacgaaaag-taaaccctcccctcccctcccctcccaaagcctcaatccaaa 7503190  T
Q  101 cacacc 106  Q
    ||||||    
T  7503191 cacacc 7503196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 9718684 - 9718721
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9718684 cctcccttctcctcctaaaccctcaatccaaacacacc 9718721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 16024192 - 16024155
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  16024192 cctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 31738617 - 31738665
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||||||    
T  31738617 ttaaaccctcccctttcttcccctcctaaaccctccatccaaacacacc 31738665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42650474 - 42650518
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  42650474 acacttaatttattttagaaaaacatgttatatattccgtaattt 42650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 3726900 - 3726865
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||| |||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacacc 3726865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 7979245 - 7979202
Alignment:
Q  2 cacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||    
T  7979245 cacttgatttattttagaaaaacatgttatatagtccgtaattt 7979202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 13405013 - 13404978
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13405013 tcccttcccctcctaaaccctcaatccaaccacacc 13404978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 16653143 - 16653190
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||||||||||||||||||| |||||| |  ||||||||||||    
T  16653143 ttaaaccctctcctcccttcccctcttaaaccattcatccaaacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 31543121 - 31543078
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||    
T  31543121 taaaccctcccctcccttcccctcttaaaccctccatccaaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 37923217 - 37923252
Alignment:
Q  2 cacttaatttattttagaaaaacattttatatagtc 37  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37923217 cacttaatttattttagaaaaacatgttatatagtc 37923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 1026989 - 1027030
Alignment:
Q  3 acttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  1026989 acttaatttattttagaaaaaca-tttatatagtccgtaattt 1027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 16024348 - 16024394
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||| ||| ||||||||||||||||||| |||| ||||||||||||    
T  16024348 taaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 40990380 - 40990425
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||||    
T  40990380 aaactctctcctcccttcctctcctaa-ccctcaatccaaacacacc 40990425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41103644 - 41103678
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatag 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  41103644 acacttaatttattttagaaaaacatgttatatag 41103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 1027053 - 1027090
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  1027053 cctcccttcccttcctaaacccttaatccaaacacacc 1027090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 2481978 - 2482011
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaaca 102  Q
    |||||||||||||||||||||||| |||||||||    
T  2481978 cctcccttcccctcctaaaccctccatccaaaca 2482011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 3726996 - 3727029
Alignment:
Q  4 cttaatttattttagaaaaacattttatatagtc 37  Q
    ||||||||||||||||||||||| ||||||||||    
T  3726996 cttaatttattttagaaaaacatgttatatagtc 3727029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 6315101 - 6315068
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||||||||||||||||||||||||||||    
T  6315101 ccttcgcctcctaaaccctcaatccaaacacacc 6315068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 8815180 - 8815143
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  8815180 cctctcttcccctcctaaaccctccatccaaacacacc 8815143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 11033458 - 11033421
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||| || ||||||||||||||||||||||||    
T  11033458 cctcccttcctcttctaaaccctcaatccaaacacacc 11033421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11575544 - 11575577
Alignment:
Q  1 acacttaatttattttagaaaaacattttatata 34  Q
    |||||||||||||||||||||||||| |||||||    
T  11575544 acacttaatttattttagaaaaacatgttatata 11575577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 11575601 - 11575646
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||| ||||||||| | ||||||||||| ||||||||||||    
T  11575601 taaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 30365169 - 30365132
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  30365169 cctcctttctcctcctaaaccctcaatccaaacacacc 30365132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 34634340 - 34634385
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||| | |||||||||||||||||| ||| |||||||||||||    
T  34634340 aaccctcacatcccttcccctcctaaactctccatccaaacacacc 34634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 2413003 - 2412967
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  2413003 cctcccctcccctcctaaaccctccatccaaacacac 2412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12022281 - 12022325
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    ||||||||||||||||| |||||||||||| || |||| ||||||    
T  12022281 acacttaatttattttaaaaaaacattttacattgtccgtaattt 12022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16653055 - 16653011
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||| |||||||||| |||||||| ||||||||||| ||||||    
T  16653055 acacttgatttattttataaaaacatgttatatagtccgtaattt 16653011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 33922563 - 33922531
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaaca 102  Q
    |||||||||| ||||||||||||||||||||||    
T  33922563 ctcccttcccttcctaaaccctcaatccaaaca 33922531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37032485 - 37032449
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  37032485 acacttaatttattttaaaaaaacatgttatatagtc 37032449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 40633034 - 40632998
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||| || ||||||||||    
T  40633034 ctcccttcccctcctaaaccctccattcaaacacacc 40632998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 44119788 - 44119744
Alignment:
Q  62 accctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||  || |||| ||||||||||||||||||||||||    
T  44119788 accctctcctctttttcccttctaaaccctcaatccaaacacacc 44119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25655110 - 25655214
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||            |||||||||| ||||||||| |||| | |||||||||||||||    
T  25655110 acacttaatttattttagaaaaacatgttatatagtccgtaattt-aaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaa 25655208  T
Q  101 cacacc 106  Q
    ||||||    
T  25655209 cacacc 25655214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 24560265 - 24560219
Alignment:
Q  60 aaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  24560265 aaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 24560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 27541978 - 27541937
Alignment:
Q  61 aaccctctcctcccttcccctcctaaaccctcaatccaaaca 102  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  27541978 aaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18654738 - 18654842
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||              |||| ||| ||||||||||||||||||||||||||| ||||    
T  18654738 acacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaaaccctcaattcaaa 18654837  T
Q  101 cacac 105  Q
    |||||    
T  18654838 cacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21773888 - 21773844
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  21773888 acacttaatttattttagaaaaacatgttatatagtccgtaattt 21773844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 6803395 - 6803442
Alignment:
Q  58 ttaaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||    
T  6803395 ttaaactctctcctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 28582704 - 28582751
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  28582704 taaaccctcccctcccttcccctcctaaatcctcagtccaaacacacc 28582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 34641189 - 34641232
Alignment:
Q  63 ccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  34641189 ccctcccctcccttcccctcctaaaccctccatccaaacacacc 34641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 41110370 - 41110323
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||||    
T  41110370 taaaccttctcctcccttcccctcctaaatcctccatccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 55428584 - 55428619
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  55428584 cctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 10748344 - 10748299
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||    
T  10748344 taaactctcttctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 21090271 - 21090312
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  21090271 cctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 24253760 - 24253723
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24253760 cctccctttccctcctaaaccctcaatccaaacacacc 24253723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 37102348 - 37102381
Alignment:
Q  73 ccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacacc 37102381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 651837 - 651801
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  651837 acacttaatttattttagaaaaacatgttatatagtc 651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10748435 - 10748479
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  10748435 acacttaatttattttagaaaaacatgttatatactccgtaattt 10748479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30200229 - 30200273
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||    
T  30200229 acacttgatttattttagaaaaacatgttatatagtccgtaattt 30200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 42772088 - 42772044
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||    
T  42772088 cctcccctcccttcccctcttaaaccttcaatccaaacacacctt 42772044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46204992 - 46204948
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||    
T  46204992 acacttaatttattttagaaaaacatgttatatagttcataattt 46204948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 5903598 - 5903551
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||| |||||||||| |||| ||||||||||||||||||    
T  5903598 taaaccctcccctgccttcccctcttaaatcctcaatccaaacacacc 5903551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 17474411 - 17474446
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||||| |||||||||||||||||||    
T  17474411 cctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 31664426 - 31664391
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  31664426 cctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 31931970 - 31932005
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  31931970 cctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 54574563 - 54574598
Alignment:
Q  71 tcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54574563 tcccttcccttcctaaaccctcaatccaaacacacc 54574598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 651776 - 651742
Alignment:
Q  72 cccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| ||||||||||||||||||||||||||||||    
T  651776 ccctccccctcctaaaccctcaatccaaacacacc 651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2387898 - 2387932
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatag 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  2387898 acacttaatttattttagaaaaacatgttatatag 2387932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 9312674 - 9312708
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacac 103  Q
    |||||| ||||||||||||||||||||||||||||    
T  9312674 cctcccctcccctcctaaaccctcaatccaaacac 9312708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 14897933 - 14897895
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  14897933 ctcccttcccctcctaaactctcaatccaaaaacacctt 14897895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 28581235 - 28581189
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||||||| |||||||||| || |||||||||| ||||||||||||    
T  28581235 taaaccctcccctcccttcctcttctaaaccctccatccaaacacac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 34641034 - 34641004
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  34641034 tcccctcctaaaccctcaatccaaacacacc 34641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 44412405 - 44412363
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||| |||| |||||||||||||||||||||| ||||||||||    
T  44412405 cctcccctctcttcccctcctaaaccctcaattcaaacacacc 44412363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 14898014 - 14897981
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacac 103  Q
    ||||||||||||||||||| ||||||||||||||    
T  14898014 ctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 24253927 - 24253964
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  24253927 cctcccttccccttctaaaccctccatccaaacacacc 24253964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 26135992 - 26136041
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||||  ||||||||||||||||||||||| || ||| ||||||||    
T  26135992 taaaccctccactcccttcccctcctaaaccctccattcaatcacacctt 26136041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14898082 - 14898046
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtc 37  Q
    |||||||||||||||||||||||||| | ||||||||    
T  14898082 acacttaatttattttagaaaaacatgtcatatagtc 14898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 24560319 - 24560279
Alignment:
Q  5 ttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  24560319 ttaatttattttagaaaaacatgttacatagtccgtaattt 24560279  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41110459 - 41110503
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaattt 45  Q
    |||||||||||||||| ||||||||| |||| |||||| ||||||    
T  41110459 acacttaatttattttcgaaaaacatgttatctagtccgtaattt 41110503  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 41110527 - 41110563
Alignment:
Q  70 ctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||  ||||||||||||||||||||||    
T  41110527 ctcccttcccctcacaaaccctcaatccaaacacacc 41110563  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 44412561 - 44412605
Alignment:
Q  64 cctctcctcccttcccctcctaaaccctcaatccaaacacacctt 108  Q
    |||| ||||||||||||||  ||||| ||||||||||||||||||    
T  44412561 cctcccctcccttcccctcacaaaccatcaatccaaacacacctt 44412605  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 46978469 - 46978441
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacaca 104  Q
    |||||||||||||||||||||||||||||    
T  46978469 tcccctcctaaaccctcaatccaaacaca 46978441  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39328 - 39432
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtccctaatttnnnnnnnnnnnnttaaaccctctcctcccttcccctcctaaaccctcaatccaaa 100  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||            | |||||||| |||||||| |||| ||||||||||||||||||    
T  39328 acacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagt-aaaccctcccctccctttcccttctaaaccctcaatccaaa 39426  T
Q  101 cacacc 106  Q
    ||||||    
T  39427 cacacc 39432  T

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Target: scaffold0198 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 3196 - 3150
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  3196 taaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 1221 - 1175
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacac 105  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  1221 taaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0096 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 6633 - 6586
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||    
T  6633 taaaccctcccctcccttctcctcctaaaacttcaatccaaacacacc 6586  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 184643 - 184613
Alignment:
Q  76 tcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||||||||||||||||||||||||    
T  184643 tcccctcctaaaccctcaatccaaacacacc 184613  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 184802 - 184847
Alignment:
Q  59 taaaccctctcctcccttcccctcctaaaccctcaatccaaacaca 104  Q
    ||||||||| | |||||| ||||||||||||||| |||||||||||    
T  184802 taaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16434 - 16471
Alignment:
Q  1 acacttaatttattttagaaaaacattttatatagtcc 38  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  16434 acacttaatttattttagacaaacatgttatatagtcc 16471  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 17743 - 17780
Alignment:
Q  69 cctcccttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  17743 cctcccttccactcctaaaccctccatccaaacacacc 17780  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 52930 - 52898
Alignment:
Q  74 cttcccctcctaaaccctcaatccaaacacacc 106  Q
    |||||| ||||||||||||||||||||||||||    
T  52930 cttcccatcctaaaccctcaatccaaacacacc 52898  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 122013 - 121985
Alignment:
Q  80 ctcctaaaccctcaatccaaacacacctt 108  Q
    |||||||||||||||||||||||||||||    
T  122013 ctcctaaaccctcaatccaaacacacctt 121985  T

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