View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18947_low_72 (Length: 235)
Name: NF18947_low_72
Description: NF18947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18947_low_72 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 45549796 - 45549581
Alignment:
| Q |
1 |
agatcataaattcatggacagcaagaaaataaagcctgaaaagattgaacaaatgttgagtagaagaaatgaacaagaagctagtggtagagcatctgga |
100 |
Q |
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| T |
45549796 |
agatcataaattcatggacagcaagaaaataaagcctgaaaagattgaacaaatgttgagtagaagaaatgaacaagaagctagtggtagagcatctgga |
45549697 |
T |
|
| Q |
101 |
aaattgaatgtcttaaatggagcagaccaaaaaaggtttagcatattcacagaacatgaactgcttcctacttctacgttgtacaatgctggcaagagtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
45549696 |
aaattgaatgtcttaaatggagcagaccaaaaaaggtttagcatattcacagaacatgaactgcttcctacttctacgttgtacaattctggcaagagtg |
45549597 |
T |
|
| Q |
201 |
aagatttacaagaatc |
216 |
Q |
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|||||||||||||||| |
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| T |
45549596 |
aagatttacaagaatc |
45549581 |
T |
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