View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18948_low_1 (Length: 878)

Name: NF18948_low_1
Description: NF18948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18948_low_1
NF18948_low_1
[»] chr4 (7 HSPs)
chr4 (14-532)||(49031685-49032203)
chr4 (695-789)||(49031477-49031572)
chr4 (130-193)||(29467598-29467661)
chr4 (128-186)||(29375934-29375992)
chr4 (129-177)||(23819121-23819169)
chr4 (129-203)||(11264333-11264407)
chr4 (129-186)||(27123333-27123390)
[»] chr5 (2 HSPs)
chr5 (83-198)||(41957420-41957534)
chr5 (129-193)||(26004971-26005035)
[»] chr3 (13 HSPs)
chr3 (128-215)||(37273165-37273252)
chr3 (83-198)||(1217769-1217883)
chr3 (129-194)||(43115088-43115153)
chr3 (129-188)||(31010434-31010493)
chr3 (129-203)||(11039303-11039377)
chr3 (129-186)||(20192587-20192644)
chr3 (129-186)||(29771870-29771927)
chr3 (89-197)||(39602180-39602287)
chr3 (129-177)||(42745070-42745118)
chr3 (130-186)||(49465917-49465973)
chr3 (130-212)||(3467343-3467425)
chr3 (129-171)||(36445857-36445899)
chr3 (132-177)||(36200131-36200176)
[»] chr7 (9 HSPs)
chr7 (129-212)||(48157075-48157158)
chr7 (129-193)||(12234863-12234927)
chr7 (135-184)||(11721222-11721271)
chr7 (129-186)||(42281495-42281552)
chr7 (79-178)||(3468597-3468695)
chr7 (129-188)||(27626102-27626161)
chr7 (106-184)||(45078287-45078365)
chr7 (130-183)||(2767162-2767215)
chr7 (129-186)||(4966188-4966245)
[»] chr2 (12 HSPs)
chr2 (84-171)||(10285848-10285934)
chr2 (129-188)||(34652015-34652074)
chr2 (129-203)||(7283028-7283102)
chr2 (128-186)||(18884898-18884956)
chr2 (136-186)||(30538154-30538204)
chr2 (129-194)||(11063520-11063585)
chr2 (129-177)||(41817200-41817248)
chr2 (129-186)||(1830077-1830134)
chr2 (71-168)||(32694187-32694283)
chr2 (129-194)||(32821841-32821906)
chr2 (130-183)||(41042006-41042059)
chr2 (129-186)||(43065431-43065488)
[»] chr8 (6 HSPs)
chr8 (136-186)||(9540977-9541027)
chr8 (129-215)||(13000376-13000462)
chr8 (131-198)||(7712017-7712084)
chr8 (128-186)||(9835881-9835939)
chr8 (130-171)||(25869262-25869303)
chr8 (130-215)||(30191093-30191178)
[»] chr1 (8 HSPs)
chr1 (128-186)||(24502809-24502867)
chr1 (103-177)||(31118049-31118123)
chr1 (129-186)||(30259467-30259524)
chr1 (135-198)||(47261547-47261610)
chr1 (85-170)||(25479570-25479654)
chr1 (129-178)||(27140510-27140559)
chr1 (129-178)||(28689441-28689490)
chr1 (85-186)||(39270406-39270506)
[»] chr6 (9 HSPs)
chr6 (129-177)||(3528835-3528883)
chr6 (130-178)||(34939777-34939825)
chr6 (133-203)||(3775092-3775162)
chr6 (129-179)||(7785732-7785782)
chr6 (129-186)||(2460132-2460189)
chr6 (129-186)||(4420675-4420732)
chr6 (129-186)||(9027610-9027667)
chr6 (129-178)||(9667974-9668023)
chr6 (136-213)||(10616496-10616572)
[»] scaffold0311 (1 HSPs)
scaffold0311 (130-188)||(10596-10654)


Alignment Details
Target: chr4 (Bit Score: 503; Significance: 0; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 14 - 532
Target Start/End: Complemental strand, 49032203 - 49031685
Alignment:
Q  14 gttttaacataaaccttatacaatttttcttgtacctttacacatcacataatatgcaaaatcacactattttcatataagatataagcttgttttcata 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49032203 gttttaacataaaccttatacaatttttcttgtacctttacacatcacataatatgcaaaatcacactattttcatataagatataagcttgttttcata 49032104  T
Q  114 agctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49032103 agctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttat 49032004  T
Q  214 gcattacgcatatgaataagctcatataacccaattcaaacaagtgctgcgacaaaatgaaatataaggaaaaggctcttacagcagcaccagagcgaac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49032003 gcattacgcatatgaataagctcatataacccaattcaaacaagtgctgcgacaaaatgaaatataaggaaaaggctcttacagcagcaccagagcgaac 49031904  T
Q  314 agagacgaggagaggttttgaaggattcccaagaaaggcccccatttcattttgcacaaaattaaggccttcaagtatctcctcccacaaaccatttggt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49031903 agagacgaggagaggttttgaaggattcccaagaaaggcccccatttcattttgcacaaaattaaggccttcaagtatctcctcccacaaaccatttggt 49031804  T
Q  414 aggttctttacattttcttgatattcttgacatgcttctgttgatatagtgagtccaggaggcacagataatccaattgttgccatttcggccaagtttg 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |    
T  49031803 aggttctttacattttcttgatattcttgacatgcttctgttgatatagtgagtccaggagggacagataatccaattgttgccatttctgctaagttcg 49031704  T
Q  514 ctccctttcctcccaacta 532  Q
    |||||||||||||||||||    
T  49031703 ctccctttcctcccaacta 49031685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 695 - 789
Target Start/End: Complemental strand, 49031572 - 49031477
Alignment:
Q  695 ataaagaatgcttaccaaggacttcatagatttgtttccatcacttctacctttgccaaaggtgaacaccctctg-ttaaaacagaaatacagaag 789  Q
    ||||||||| ||||||||||||||||| |  |||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  49031572 ataaagaatacttaccaaggacttcatggccttgtttccttcacttttacctttgccaaaagtgaacaccctctgtttaaaacagaaataaagaag 49031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 29467661 - 29467598
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaa 193  Q
    ||||||||||||| ||||||||  | ||||||||||||||||  ||||||||||||||| ||||    
T  29467661 ttatggaaataagctgaaaacagcttatggacatgtcataagccgtttctataagctttaccaa 29467598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 29375934 - 29375992
Alignment:
Q  128 acttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||| |||||| |||||||    
T  29375934 acttatggaaataagttgaaaacaaaatatggacctgtcataagctgtttccataagct 29375992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 23819121 - 23819169
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    ||||| |||||||||||||||||| | |||||||||||||||| |||||    
T  23819121 cttatagaaataagatgaaaacaacttatggacatgtcataagctgttt 23819169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 11264333 - 11264407
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcac 203  Q
    |||||||||||||| ||||||||  | |||||||||||||||| || ||||||| ||| | ||||| ||| ||||    
T  11264333 cttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctcac 11264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 27123390 - 27123333
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| ||||||||| | |  ||||||||||||| |||||| |||||||    
T  27123390 cttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagct 27123333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 41957534 - 41957420
Alignment:
Q  83 ttttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctata 182  Q
    ||||||| |||| |||||||| |||||||||||||| | | |   ||||||| ||||||||||||||||| | |||||||||||||||| ||||||  ||    
T  41957534 ttttcatgtaagttataagct-gttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgta 41957436  T
Q  183 agcttttccaaatagt 198  Q
    |||| |||||||||||    
T  41957435 agctcttccaaatagt 41957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 26005035 - 26004971
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaa 193  Q
    |||||||||||||| ||||||||| ||| | ||||| |||||| ||||||| |||| ||||||||    
T  26005035 cttatggaaataaggtgaaaacaattaaggaacatgccataagctgtttctgtaagtttttccaa 26004971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 6e-18; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 37273165 - 37273252
Alignment:
Q  128 acttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttatgc 215  Q
    ||||||||||||||| ||||||||| | |||||||||||||||| |||||| ||||||| | ||||| ||| |||||| |||||||||    
T  37273165 acttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgc 37273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 1217883 - 1217769
Alignment:
Q  83 ttttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctata 182  Q
    ||||||| |||| |||||||| |||||||||||||| | | |   ||||||| || |||||||||||||| | |||||||||||||||| ||||||  ||    
T  1217883 ttttcatgtaagttataagct-gttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgta 1217785  T
Q  183 agcttttccaaatagt 198  Q
    |||| |||||||||||    
T  1217784 agctcttccaaatagt 1217769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 43115088 - 43115153
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaa 194  Q
    |||||||||||||| ||||||||| | |||||||||||||||| |||||| |||| || |||||||    
T  43115088 cttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaa 43115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 31010434 - 31010493
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttt 188  Q
    ||||||||| |||| ||||||||  | |||||||||||||||| ||||||||||||||||    
T  31010434 cttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagcttt 31010493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 11039377 - 11039303
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcac 203  Q
    |||||||| ||||| ||||||||| | ||||||||||||||| ||||||| ||||||| || |||| ||| ||||    
T  11039377 cttatggagataagctgaaaacaacttatggacatgtcataatatgtttccataagctctttcaaacagtctcac 11039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 20192644 - 20192587
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||||||| || ||||||||  | |||||||||||||||| ||||||||||||||    
T  20192644 cttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagct 20192587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 29771870 - 29771927
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| ||||||||| | ||||||||||| |||| ||||||| ||||||    
T  29771870 cttatggaaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagct 29771927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 39602287 - 39602180
Alignment:
Q  89 tataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttt 188  Q
    |||||| |||||||| |||||||||||||| | | |   ||||||| ||||||| ||||||||| | ||| |||||||||||| ||| |  ||||||| |    
T  39602287 tataagttataagct-gttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataagctct 39602189  T
Q  189 tccaaatag 197  Q
    |||||||||    
T  39602188 tccaaatag 39602180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 42745070 - 42745118
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  42745070 cttatggaaataagatgaaaacaacttatgaacatgtcataagttgttt 42745118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 49465973 - 49465917
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||||||||| |||||| |  | |||||||||||||||| ||||||||||||||    
T  49465973 ttatggaaataagttgaaaatagttcatggacatgtcataagttgtttctataagct 49465917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 3467425 - 3467343
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgctta 212  Q
    |||||||||||||||| |||||| | |||| ||||||||||| |||||  ||| ||| | ||||||| | |||||| ||||||    
T  3467425 ttatggaaataagatgcaaacaacttatggccatgtcataagctgttttcatatgctgtaccaaataatctcaccagtgctta 3467343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 36445857 - 36445899
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataag 171  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||    
T  36445857 cttatgaaaataagatgaaaacaactaatgaacatgtcataag 36445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 36200131 - 36200176
Alignment:
Q  132 atggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||    
T  36200131 atggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 48157158 - 48157075
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgctta 212  Q
    |||||||||||||| ||||||||  | ||||||||| |||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  48157158 cttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagtctcacaaatgctta 48157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 12234927 - 12234863
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaa 193  Q
    |||||||||||||| ||||||||  | || ||||||||||||| |||||||||||||| ||||||    
T  12234927 cttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagctattccaa 12234863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 11721271 - 11721222
Alignment:
Q  135 gaaataagatgaaaacaaataatggacatgtcataagatgtttctataag 184  Q
    |||||||||||||||||||| || ||||||||||||| | ||||||||||    
T  11721271 gaaataagatgaaaacaaattatcgacatgtcataagctatttctataag 11721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 42281552 - 42281495
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||| |||||||| ||||||||||| ||  |||||||||||| ||||||||||||||    
T  42281552 cttatagaaataagctgaaaacaaattatttacatgtcataagctgtttctataagct 42281495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 3468597 - 3468695
Alignment:
Q  79 actattttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttc 178  Q
    ||||||||| |||||| ||||||||| ||||||||| ||| | |||   |||| |||||||||| || |||||| | ||||||||||||| || ||||||    
T  3468597 actattttcgtataagttataagctt-ttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgtttc 3468695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 27626161 - 27626102
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttt 188  Q
    |||||||||||||| | ||||||  | |||||||||||||||| |||||| |||||||||    
T  27626161 cttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagcttt 27626102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 45078287 - 45078365
Alignment:
Q  106 ttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataag 184  Q
    ||||||||||||| ||  | | |||| |||||||||| ||||||||  | |||||||||||||||| | ||||||||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttctataag 45078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 2767215 - 2767162
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataa 183  Q
    ||||||||||||| ||||||||  | |||||||||| ||||| |||||||||||    
T  2767215 ttatggaaataagttgaaaacagttgatggacatgtaataagttgtttctataa 2767162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 4966188 - 4966245
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||  ||||||||| | |||||||| |||||||  |||||||||||||    
T  4966188 cttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagct 4966245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 10285848 - 10285934
Alignment:
Q  84 tttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataag 171  Q
    ||||||||||| |||||| | |||| |||||||||||||||   ||||||||||||||| ||||||||  | ||||||||||||||||    
T  10285848 tttcatataagctataag-tcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataag 10285934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 34652074 - 34652015
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttt 188  Q
    |||||||||||||| ||||||||  | |||||||||||||||| ||||||||||||||||    
T  34652074 cttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagcttt 34652015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 7283028 - 7283102
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcac 203  Q
    |||||||| ||||||||||||||| | |||||||| ||||||| |||||| | |||||  |||||||||| ||||    
T  7283028 cttatggatataagatgaaaacaacttatggacatatcataagttgtttccaaaagctaatccaaatagtctcac 7283102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 18884898 - 18884956
Alignment:
Q  128 acttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||||||||||  ||||||||  ||||||| |||||||||| ||||||||||||||    
T  18884898 acttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagct 18884956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 30538204 - 30538154
Alignment:
Q  136 aaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||| ||||||||| | |||||||||||||||| ||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctataagct 30538154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 11063520 - 11063585
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaa 194  Q
    |||||| ||||||| | ||||||| | ||||||||||||||| ||||||| ||||||| |||||||    
T  11063520 cttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaa 11063585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 41817200 - 41817248
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    |||||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  41817200 cttatggaaataagctgaaaacaaattatcaacatgtcataagatgttt 41817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 1830077 - 1830134
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| |||||||     ||||||||||||||||||||||| |||||||    
T  1830077 cttatggaaataagctgaaaactccctatggacatgtcataagatgtttccataagct 1830134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 32694187 - 32694283
Alignment:
Q  71 aaaatcacactattttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcat 168  Q
    ||||||| |||||||| ||||||  |||||| |||||| ||||||||| | ||| |   || |||||||||| |||||||||  ||||||||||||||    
T  32694187 aaaatcagactatttttatataatttataag-ttgtttgcataagctatcctagatagattgtggaaataagctgaaaacaacaaatggacatgtcat 32694283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 32821841 - 32821906
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaa 194  Q
    ||||| |||||||  ||||||||  | |||||||||||||||| ||||||||||| || |||||||    
T  32821841 cttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaa 32821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 41042059 - 41042006
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataa 183  Q
    ||||||||||||| ||||||||  | |||||||||| ||||| |||||||||||    
T  41042059 ttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataa 41042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 43065488 - 43065431
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||| |||||||| ||||||||| | |||||||||||||||| |||||  |||||||    
T  43065488 cttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagct 43065431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 9541027 - 9540977
Alignment:
Q  136 aaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||| |||| |||||| ||||||||||||||||||||||| |||||||    
T  9541027 aaataagctgaacacaaattatggacatgtcataagatgtttccataagct 9540977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 13000462 - 13000376
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttatgc 215  Q
    |||||||||||||| ||||||||| |  ||||||||||||||| |||| | |||| || || |||||||| |||| | |||||||||    
T  13000462 cttatggaaataagctgaaaacaacttgtggacatgtcataagttgttaccataaactcttgcaaatagtctcacaagtgcttatgc 13000376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 7712084 - 7712017
Alignment:
Q  131 tatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagt 198  Q
    |||||||||||| ||||||||  ||||||||||||||  || | |||||||||||| | |||||||||    
T  7712084 tatggaaataaggtgaaaacagctaatggacatgtcacgagctttttctataagctctcccaaatagt 7712017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 9835939 - 9835881
Alignment:
Q  128 acttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||||||||||||||||||||||  | ||| |||||||||||| |||||  |||||||    
T  9835939 acttatggaaataagatgaaaacagcttatgaacatgtcataagctgtttacataagct 9835881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 25869303 - 25869262
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataag 171  Q
    ||||||||||||| ||||||||| | ||||||||||||||||    
T  25869303 ttatggaaataagctgaaaacaacttatggacatgtcataag 25869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 30191178 - 30191093
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttatgc 215  Q
    ||||||||||||| ||||||||| |  || |||||||||||| |||||| ||||||| | ||||| ||| | || | |||||||||    
T  30191178 ttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgc 30191093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 24502867 - 24502809
Alignment:
Q  128 acttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    ||||| ||||||||| ||||||||||| || ||||||||||||| ||||||| ||||||    
T  24502867 acttacggaaataagctgaaaacaaattattgacatgtcataagttgtttctgtaagct 24502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 31118049 - 31118123
Alignment:
Q  103 ttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    |||||||||||||||| | |  |  ||||||||||||||| ||||||||| | ||| ||||||||||||||||||    
T  31118049 ttgttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataagatgttt 31118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 30259524 - 30259467
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| ||||||||| | || |||||||| |||| ||||||||||||||    
T  30259524 cttatggaaataagttgaaaacaatttattgacatgtcgtaagttgtttctataagct 30259467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 47261547 - 47261610
Alignment:
Q  135 gaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagt 198  Q
    |||||||| ||||||| | ||||| |||||||||||| || ||||||||||| | |||||||||    
T  47261547 gaaataagctgaaaaccactaatgaacatgtcataagttgcttctataagctctcccaaatagt 47261610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 25479570 - 25479654
Alignment:
Q  85 ttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataa 170  Q
    |||||||| | |||||| |||||||||||||||| | |||    |||||| ||||||| ||||||||| ||||| |||||||||||    
T  25479570 ttcatataggctataag-ttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 27140510 - 27140559
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttc 178  Q
    |||||| ||||||| ||||||||| | |||||||||||||||| ||||||    
T  27140510 cttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttc 27140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 28689490 - 28689441
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttc 178  Q
    |||||| ||||||| ||||||||| | |||||||||||||||| ||||||    
T  28689490 cttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttc 28689441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 39270506 - 39270406
Alignment:
Q  85 ttcatataagatataagcttgttttcataagctaacatagttcacttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataag 184  Q
    |||||||||||||||||| ||||||||||||||| |||||    | |||| ||||||| ||||||||  | ||||||||| || ||| |||||  |||||    
T  39270506 ttcatataagatataagc-tgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataag 39270408  T
Q  185 ct 186  Q
    ||    
T  39270407 ct 39270406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000005; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 3528835 - 3528883
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgttt 177  Q
    |||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  3528835 cttatgaaaataagatgaaaacaagttatggacatgtcataagttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 34939777 - 34939825
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttc 178  Q
    ||||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  34939777 ttatggaaataagctgaaaacaatttatggacatgtcataagctgtttc 34939825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 3775162 - 3775092
Alignment:
Q  133 tggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcac 203  Q
    |||| ||||| ||||||||  | ||| |||||||||||| |||||||||||||| |||| |||||| ||||    
T  3775162 tggacataagctgaaaacagtttatgcacatgtcataagctgtttctataagctcttccgaatagtctcac 3775092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 7785782 - 7785732
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttct 179  Q
    |||||||||||||| ||||||||| | || ||||||||||||| |||||||    
T  7785782 cttatggaaataagctgaaaacaacttatagacatgtcataagctgtttct 7785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 2460189 - 2460132
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| ||||||||| | |  ||||||||||||| |||||| |||||||    
T  2460189 cttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagct 2460132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 4420675 - 4420732
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||||||||||| ||||||||  | ||| |||||||||||  ||||||||||||||    
T  4420675 cttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagct 4420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 9027610 - 9027667
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 186  Q
    |||||| ||||||| ||||||||| | |||||||||||||||| | |||| |||||||    
T  9027610 cttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagct 9027667  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 9668023 - 9667974
Alignment:
Q  129 cttatggaaataagatgaaaacaaataatggacatgtcataagatgtttc 178  Q
    |||||||||||||| ||||||||  | |||||||||||||||| ||||||    
T  9668023 cttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 9667974  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 10616572 - 10616496
Alignment:
Q  136 aaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttttccaaatagtgtcaccaatgcttat 213  Q
    ||||||| |||| |||| | | |||||||||||||| |||||| ||||||| | ||||||||| |||| |||||||||    
T  10616572 aaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaatagt-tcacaaatgcttat 10616496  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 10654 - 10596
Alignment:
Q  130 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagcttt 188  Q
    ||||||||||||| ||||||||| | ||||||||||||| || |||||  |||||||||    
T  10654 ttatggaaataagctgaaaacaacttatggacatgtcattagttgtttacataagcttt 10596  T

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