View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18948_low_24 (Length: 264)

Name: NF18948_low_24
Description: NF18948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18948_low_24
NF18948_low_24
[»] chr1 (63 HSPs)
chr1 (93-246)||(39776560-39776713)
chr1 (1-93)||(15034726-15034818)
chr1 (1-97)||(27935552-27935648)
chr1 (1-95)||(23536065-23536159)
chr1 (1-95)||(4038073-4038167)
chr1 (4-93)||(30190206-30190295)
chr1 (3-87)||(27804271-27804355)
chr1 (18-87)||(34756433-34756502)
chr1 (1-87)||(34756494-34756580)
chr1 (18-95)||(15034657-15034734)
chr1 (3-87)||(40264099-40264183)
chr1 (18-93)||(24273218-24273293)
chr1 (1-87)||(28745863-28745949)
chr1 (1-87)||(50005146-50005232)
chr1 (18-95)||(26501077-26501154)
chr1 (18-93)||(4038159-4038234)
chr1 (18-97)||(8224764-8224843)
chr1 (1-84)||(32572989-32573072)
chr1 (18-93)||(47165210-47165285)
chr1 (18-95)||(27804349-27804426)
chr1 (19-96)||(38277412-38277489)
chr1 (18-87)||(45565400-45565469)
chr1 (1-87)||(38277482-38277567)
chr1 (19-97)||(43622977-43623055)
chr1 (1-55)||(45565461-45565515)
chr1 (1-70)||(37214842-37214911)
chr1 (33-97)||(29446746-29446810)
chr1 (26-93)||(6470692-6470759)
chr1 (18-97)||(28632584-28632662)
chr1 (27-94)||(32287940-32288007)
chr1 (18-85)||(44410319-44410386)
chr1 (18-84)||(44570687-44570753)
chr1 (18-96)||(49659214-49659291)
chr1 (18-95)||(50005077-50005154)
chr1 (27-87)||(37036956-37037016)
chr1 (1-96)||(44410378-44410473)
chr1 (1-55)||(5474437-5474491)
chr1 (18-84)||(37448399-37448465)
chr1 (5-51)||(47074177-47074223)
chr1 (18-63)||(5474483-5474528)
chr1 (36-85)||(28745805-28745854)
chr1 (18-95)||(31166308-31166385)
chr1 (3-51)||(17502222-17502270)
chr1 (18-86)||(37447900-37447968)
chr1 (16-51)||(34007417-34007452)
chr1 (17-51)||(34007382-34007416)
chr1 (28-93)||(946376-946440)
chr1 (58-99)||(15245454-15245495)
chr1 (18-55)||(17502264-17502301)
chr1 (18-55)||(32572960-32572997)
chr1 (18-55)||(40264068-40264105)
chr1 (26-93)||(49216344-49216412)
chr1 (18-73)||(946933-946988)
chr1 (53-96)||(5474414-5474457)
chr1 (7-82)||(25889169-25889243)
chr1 (38-85)||(32652214-32652261)
chr1 (58-97)||(34007441-34007480)
chr1 (29-87)||(51847858-51847916)
chr1 (18-55)||(15245480-15245517)
chr1 (1-29)||(15245509-15245537)
chr1 (18-66)||(15467961-15468009)
chr1 (19-55)||(23536152-23536188)
chr1 (58-98)||(32572935-32572975)
[»] chr8 (56 HSPs)
chr8 (1-96)||(17110866-17110961)
chr8 (16-95)||(42711362-42711441)
chr8 (20-97)||(40046800-40046877)
chr8 (18-93)||(3853616-3853691)
chr8 (18-93)||(3858074-3858149)
chr8 (18-93)||(17110953-17111028)
chr8 (1-87)||(3853683-3853769)
chr8 (1-87)||(3858141-3858227)
chr8 (5-87)||(30435252-30435333)
chr8 (3-87)||(13404833-13404917)
chr8 (28-93)||(33902667-33902732)
chr8 (19-83)||(13404912-13404976)
chr8 (18-98)||(33377305-33377385)
chr8 (29-87)||(8689138-8689196)
chr8 (1-97)||(33902732-33902829)
chr8 (18-87)||(4156251-4156320)
chr8 (18-95)||(23011732-23011809)
chr8 (30-93)||(14800056-14800119)
chr8 (18-93)||(24044960-24045035)
chr8 (18-93)||(29257359-29257434)
chr8 (18-93)||(44889354-44889429)
chr8 (19-97)||(14235-14312)
chr8 (19-93)||(28324671-28324745)
chr8 (27-97)||(36103097-36103167)
chr8 (18-87)||(29482815-29482884)
chr8 (19-96)||(33986001-33986078)
chr8 (18-87)||(44346686-44346755)
chr8 (3-55)||(38573433-38573485)
chr8 (36-95)||(14991690-14991749)
chr8 (18-87)||(35979012-35979081)
chr8 (26-78)||(8049269-8049321)
chr8 (13-93)||(37268086-37268166)
chr8 (18-93)||(31807409-31807483)
chr8 (27-93)||(515549-515615)
chr8 (18-63)||(38573479-38573524)
chr8 (16-73)||(40046872-40046929)
chr8 (48-95)||(27322687-27322734)
chr8 (45-96)||(32626069-32626120)
chr8 (19-60)||(8689207-8689248)
chr8 (18-95)||(11744727-11744804)
chr8 (58-99)||(14799973-14800014)
chr8 (16-61)||(32626023-32626068)
chr8 (19-55)||(7202885-7202921)
chr8 (19-55)||(42739969-42740005)
chr8 (36-95)||(1088303-1088362)
chr8 (58-93)||(30435350-30435385)
chr8 (20-55)||(42711324-42711359)
chr8 (18-60)||(13144616-13144658)
chr8 (1-55)||(14799999-14800052)
chr8 (18-87)||(9982643-9982711)
chr8 (18-55)||(26520447-26520484)
chr8 (18-55)||(30444941-30444978)
chr8 (18-55)||(34008819-34008856)
chr8 (3-31)||(4156229-4156257)
chr8 (19-55)||(29611408-29611444)
chr8 (62-102)||(42711295-42711335)
[»] chr4 (54 HSPs)
chr4 (1-98)||(7352879-7352976)
chr4 (1-93)||(857306-857398)
chr4 (1-93)||(28845938-28846030)
chr4 (4-93)||(49111382-49111471)
chr4 (1-98)||(1107046-1107144)
chr4 (19-103)||(1112595-1112679)
chr4 (1-93)||(11040968-11041059)
chr4 (18-96)||(4896716-4896794)
chr4 (18-93)||(15660267-15660342)
chr4 (1-95)||(41498557-41498651)
chr4 (3-96)||(15660180-15660273)
chr4 (18-85)||(10128058-10128125)
chr4 (18-93)||(36455907-36455982)
chr4 (19-93)||(31473849-31473923)
chr4 (1-87)||(42844610-42844696)
chr4 (19-87)||(10633038-10633106)
chr4 (19-85)||(1539649-1539715)
chr4 (19-93)||(14982280-14982354)
chr4 (18-96)||(36456010-36456088)
chr4 (18-87)||(7352818-7352887)
chr4 (18-87)||(28845877-28845946)
chr4 (18-95)||(42844541-42844618)
chr4 (3-87)||(10127980-10128064)
chr4 (1-97)||(26250905-26251001)
chr4 (18-93)||(1112706-1112781)
chr4 (18-93)||(2125857-2125932)
chr4 (26-85)||(11348329-11348388)
chr4 (18-93)||(35470122-35470197)
chr4 (35-92)||(4441338-4441395)
chr4 (2-55)||(4441396-4441449)
chr4 (10-93)||(467879-467960)
chr4 (18-85)||(1107136-1107203)
chr4 (26-93)||(4896648-4896715)
chr4 (27-93)||(16516171-16516237)
chr4 (18-66)||(857266-857314)
chr4 (27-93)||(5715744-5715810)
chr4 (44-94)||(31742874-31742924)
chr4 (18-95)||(41139473-41139548)
chr4 (19-93)||(55266860-55266934)
chr4 (18-66)||(29091164-29091212)
chr4 (1-51)||(14982347-14982396)
chr4 (27-85)||(19461743-19461801)
chr4 (18-55)||(26250993-26251030)
chr4 (46-87)||(42542979-42543020)
chr4 (18-93)||(41498489-41498565)
chr4 (28-63)||(26534523-26534558)
chr4 (5-47)||(32724961-32725003)
chr4 (5-51)||(46724195-46724241)
chr4 (26-87)||(31742782-31742843)
chr4 (31-95)||(31947588-31947655)
chr4 (1-34)||(36455974-36456007)
chr4 (18-55)||(42775643-42775680)
chr4 (19-95)||(42776635-42776711)
chr4 (39-95)||(52493924-52493978)
[»] chr3 (56 HSPs)
chr3 (1-111)||(44692889-44692999)
chr3 (3-97)||(27251963-27252057)
chr3 (3-95)||(9129413-9129505)
chr3 (3-95)||(9137520-9137612)
chr3 (2-93)||(39110394-39110485)
chr3 (1-93)||(28092214-28092306)
chr3 (18-93)||(46672800-46672875)
chr3 (1-94)||(5415782-5415875)
chr3 (18-103)||(49457333-49457418)
chr3 (18-85)||(31070415-31070481)
chr3 (18-97)||(44436254-44436333)
chr3 (1-60)||(44436325-44436384)
chr3 (18-96)||(34088568-34088646)
chr3 (18-87)||(21307529-21307598)
chr3 (1-93)||(46429463-46429555)
chr3 (18-93)||(36397986-36398061)
chr3 (18-93)||(44692822-44692897)
chr3 (19-97)||(42005951-42006029)
chr3 (19-93)||(47767432-47767506)
chr3 (18-95)||(9129342-9129419)
chr3 (18-95)||(9137449-9137526)
chr3 (3-55)||(25655335-25655387)
chr3 (1-69)||(31070473-31070541)
chr3 (1-93)||(47284293-47284385)
chr3 (18-93)||(5415867-5415942)
chr3 (19-93)||(37054394-37054468)
chr3 (18-96)||(53129840-53129918)
chr3 (19-93)||(53470427-53470501)
chr3 (39-99)||(35279920-35279980)
chr3 (1-55)||(332012-332067)
chr3 (18-85)||(19475824-19475891)
chr3 (18-96)||(671616-671694)
chr3 (18-95)||(7302344-7302421)
chr3 (18-73)||(30766573-30766628)
chr3 (18-85)||(37321558-37321625)
chr3 (18-93)||(48947605-48947680)
chr3 (29-93)||(46635857-46635921)
chr3 (30-85)||(30767112-30767167)
chr3 (26-73)||(31189402-31189449)
chr3 (37-96)||(46001361-46001420)
chr3 (1-87)||(39215905-39215991)
chr3 (29-87)||(44288467-44288525)
chr3 (36-97)||(42130688-42130749)
chr3 (26-87)||(52527042-52527103)
chr3 (49-93)||(2732639-2732683)
chr3 (18-101)||(7976539-7976623)
chr3 (58-93)||(25655315-25655350)
chr3 (58-96)||(25655403-25655441)
chr3 (45-83)||(47336891-47336929)
chr3 (18-55)||(332059-332096)
chr3 (26-67)||(19475923-19475964)
chr3 (18-55)||(25655381-25655418)
chr3 (18-55)||(27251932-27251969)
chr3 (26-55)||(27485492-27485521)
chr3 (18-63)||(42130776-42130821)
chr3 (18-55)||(46429434-46429471)
[»] chr5 (58 HSPs)
chr5 (1-97)||(40809337-40809433)
chr5 (1-93)||(9764405-9764497)
chr5 (1-93)||(2316446-2316537)
chr5 (1-93)||(15373960-15374052)
chr5 (1-93)||(20523133-20523225)
chr5 (15-93)||(15804322-15804400)
chr5 (1-96)||(32390039-32390134)
chr5 (5-98)||(32470953-32471044)
chr5 (20-87)||(2721557-2721624)
chr5 (4-87)||(28828417-28828500)
chr5 (18-96)||(927299-927377)
chr5 (1-87)||(16515011-16515096)
chr5 (18-95)||(15374044-15374121)
chr5 (18-103)||(25935285-25935370)
chr5 (33-98)||(40643916-40643981)
chr5 (3-95)||(23092031-23092123)
chr5 (1-96)||(6634012-6634106)
chr5 (18-93)||(26281264-26281339)
chr5 (18-93)||(37722889-37722964)
chr5 (29-95)||(2316376-2316442)
chr5 (18-92)||(3563278-3563352)
chr5 (18-96)||(9764335-9764413)
chr5 (18-92)||(20523217-20523291)
chr5 (18-96)||(40090409-40090487)
chr5 (18-98)||(41762210-41762290)
chr5 (18-93)||(22766952-22767027)
chr5 (18-97)||(33245367-33245446)
chr5 (18-96)||(16515102-16515180)
chr5 (19-93)||(22303866-22303940)
chr5 (33-103)||(32470872-32470942)
chr5 (1-55)||(40643856-40643910)
chr5 (19-101)||(40809426-40809508)
chr5 (18-95)||(32250093-32250169)
chr5 (39-87)||(15804399-15804447)
chr5 (19-87)||(19533903-19533971)
chr5 (18-93)||(23091963-23092037)
chr5 (19-86)||(37145497-37145564)
chr5 (18-87)||(9894317-9894386)
chr5 (38-87)||(28828373-28828422)
chr5 (20-97)||(34982212-34982288)
chr5 (48-97)||(5658772-5658821)
chr5 (18-87)||(32389978-32390047)
chr5 (18-96)||(10314646-10314724)
chr5 (38-97)||(13243453-13243514)
chr5 (27-93)||(35379344-35379409)
chr5 (19-87)||(14834830-14834898)
chr5 (19-61)||(37241598-37241640)
chr5 (18-87)||(6634098-6634167)
chr5 (18-55)||(22305132-22305169)
chr5 (19-55)||(2550348-2550384)
chr5 (58-97)||(2550324-2550363)
chr5 (44-87)||(13243514-13243557)
chr5 (58-96)||(22305109-22305147)
chr5 (18-55)||(15270849-15270886)
chr5 (18-55)||(17542356-17542393)
chr5 (28-73)||(20320653-20320698)
chr5 (18-55)||(33146211-33146248)
chr5 (18-54)||(28490031-28490067)
[»] chr7 (51 HSPs)
chr7 (1-99)||(40854036-40854135)
chr7 (1-97)||(40110804-40110901)
chr7 (1-96)||(2057392-2057487)
chr7 (1-95)||(49052784-49052877)
chr7 (1-96)||(44915192-44915287)
chr7 (18-96)||(43955514-43955592)
chr7 (18-95)||(40110735-40110812)
chr7 (113-245)||(44207967-44208099)
chr7 (18-101)||(31632714-31632797)
chr7 (18-96)||(5644674-5644752)
chr7 (18-87)||(21635969-21636038)
chr7 (18-95)||(29065817-29065894)
chr7 (1-98)||(34388332-34388429)
chr7 (1-93)||(5644744-5644836)
chr7 (1-93)||(29065886-29065978)
chr7 (18-93)||(26162121-26162196)
chr7 (18-96)||(35776939-35777017)
chr7 (29-87)||(43955609-43955667)
chr7 (3-93)||(46482015-46482104)
chr7 (26-93)||(34398940-34399008)
chr7 (18-93)||(28539152-28539227)
chr7 (27-93)||(6498758-6498824)
chr7 (18-95)||(39342626-39342703)
chr7 (28-96)||(14603256-14603324)
chr7 (3-95)||(21635883-21635975)
chr7 (30-93)||(2057491-2057554)
chr7 (18-96)||(34388262-34388340)
chr7 (18-87)||(23455231-23455300)
chr7 (27-100)||(25189219-25189292)
chr7 (28-93)||(35455804-35455869)
chr7 (28-92)||(9784925-9784989)
chr7 (19-95)||(30524253-30524329)
chr7 (18-93)||(23548595-23548670)
chr7 (18-95)||(29639199-29639276)
chr7 (18-63)||(46069421-46069466)
chr7 (21-87)||(43791098-43791162)
chr7 (1-87)||(46069458-46069541)
chr7 (18-87)||(49052869-49052935)
chr7 (19-87)||(30629063-30629131)
chr7 (18-93)||(18789230-18789305)
chr7 (19-102)||(22391572-22391655)
chr7 (36-84)||(22351874-22351922)
chr7 (33-96)||(46481943-46482006)
chr7 (46-95)||(29195707-29195756)
chr7 (26-67)||(31632828-31632869)
chr7 (58-95)||(31913234-31913271)
chr7 (18-55)||(40854007-40854044)
chr7 (18-63)||(44915279-44915324)
chr7 (19-55)||(14790151-14790187)
chr7 (18-66)||(18789544-18789592)
chr7 (19-55)||(32650611-32650647)
[»] chr2 (49 HSPs)
chr2 (1-94)||(14537198-14537291)
chr2 (1-96)||(784790-784885)
chr2 (1-95)||(14365698-14365793)
chr2 (1-93)||(11716408-11716500)
chr2 (18-95)||(27033488-27033565)
chr2 (1-96)||(41461512-41461607)
chr2 (18-93)||(41461599-41461674)
chr2 (18-95)||(17180295-17180372)
chr2 (18-96)||(10480116-10480194)
chr2 (28-93)||(14365793-14365858)
chr2 (27-87)||(28740602-28740662)
chr2 (18-93)||(784877-784952)
chr2 (18-93)||(13017779-13017854)
chr2 (18-101)||(33189255-33189338)
chr2 (1-55)||(11684657-11684711)
chr2 (18-95)||(769034-769111)
chr2 (18-87)||(11532251-11532320)
chr2 (18-87)||(11793901-11793970)
chr2 (19-95)||(11141303-11141379)
chr2 (36-96)||(11684596-11684656)
chr2 (18-93)||(1583807-1583882)
chr2 (1-55)||(11824718-11824772)
chr2 (19-85)||(30698289-30698355)
chr2 (26-95)||(7228018-7228087)
chr2 (36-85)||(11716501-11716550)
chr2 (18-93)||(35047677-35047752)
chr2 (36-95)||(39630223-39630282)
chr2 (8-87)||(44256181-44256259)
chr2 (1-102)||(14954257-14954359)
chr2 (28-96)||(3092279-3092347)
chr2 (29-93)||(45094480-45094544)
chr2 (5-55)||(3345816-3345867)
chr2 (26-93)||(8735844-8735911)
chr2 (30-93)||(10244177-10244240)
chr2 (1-55)||(10244244-10244298)
chr2 (18-96)||(17905651-17905729)
chr2 (19-67)||(7167666-7167714)
chr2 (18-66)||(32839646-32839694)
chr2 (18-60)||(14954351-14954393)
chr2 (18-87)||(40026070-40026139)
chr2 (18-57)||(11607257-11607296)
chr2 (1-51)||(27033557-27033607)
chr2 (58-96)||(41585710-41585748)
chr2 (58-87)||(3345852-3345881)
chr2 (18-55)||(8736439-8736476)
chr2 (26-67)||(11532176-11532217)
chr2 (18-55)||(14537283-14537320)
chr2 (58-87)||(44205678-44205707)
chr2 (19-55)||(11824765-11824801)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-87)||(472-558)
scaffold1562 (30-96)||(402-468)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-87)||(2035-2121)
scaffold1158 (30-96)||(2125-2191)
[»] chr6 (25 HSPs)
chr6 (1-87)||(6919714-6919800)
chr6 (1-93)||(776080-776172)
chr6 (18-93)||(9285647-9285722)
chr6 (29-98)||(8574760-8574829)
chr6 (18-87)||(9763018-9763087)
chr6 (29-93)||(8574695-8574759)
chr6 (18-96)||(776164-776242)
chr6 (1-95)||(9763079-9763173)
chr6 (19-87)||(15299510-15299577)
chr6 (27-102)||(34244987-34245062)
chr6 (35-97)||(6919808-6919870)
chr6 (19-96)||(28918162-28918239)
chr6 (3-55)||(9285716-9285768)
chr6 (18-93)||(29889432-29889507)
chr6 (19-93)||(13487275-13487349)
chr6 (21-73)||(15299419-15299471)
chr6 (19-87)||(15832472-15832540)
chr6 (18-93)||(1368477-1368552)
chr6 (58-96)||(8475176-8475214)
chr6 (53-93)||(33733432-33733472)
chr6 (18-66)||(34364770-34364818)
chr6 (30-61)||(15299474-15299505)
chr6 (60-101)||(1195343-1195384)
chr6 (18-71)||(6358249-6358302)
chr6 (18-66)||(9697489-9697537)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-93)||(41997-42072)
scaffold0009 (36-95)||(42080-42139)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-63)||(56304-56366)
scaffold0044 (18-87)||(56358-56427)
[»] scaffold0048 (1 HSPs)
scaffold0048 (18-87)||(82949-83018)
[»] scaffold0169 (1 HSPs)
scaffold0169 (18-97)||(4071-4150)
[»] scaffold0318 (1 HSPs)
scaffold0318 (18-93)||(2867-2941)
[»] scaffold0301 (1 HSPs)
scaffold0301 (28-87)||(7157-7216)
[»] scaffold0129 (2 HSPs)
scaffold0129 (18-97)||(19194-19272)
scaffold0129 (19-87)||(19784-19851)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-73)||(10906-10961)
[»] scaffold0400 (1 HSPs)
scaffold0400 (18-92)||(4496-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (18-92)||(5140-5214)
[»] scaffold0337 (1 HSPs)
scaffold0337 (30-95)||(15874-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (30-95)||(2916-2980)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-102)||(109040-109084)


Alignment Details
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 39776560 - 39776713
Alignment:
Q  93 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776560 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 39776659  T
Q  193 gcgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctgt 246  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776660 gtgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctgt 39776713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15034726 - 15034818
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  15034726 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27935552 - 27935648
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  27935552 ggtgaattctattgtttgaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttagg 27935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23536159 - 23536065
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  23536159 ggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4038167 - 4038073
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  4038167 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 30190206 - 30190295
Alignment:
Q  4 gaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  30190206 gaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 27804355 - 27804271
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  27804355 tgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaaca 27804271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 34756502 - 34756433
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34756502 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 34756433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34756494 - 34756580
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  34756494 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaaca 34756580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 15034734 - 15034657
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  15034734 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 40264099 - 40264183
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  40264099 tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaaca 40264183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 24273218 - 24273293
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28745863 - 28745949
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||| |||  | ||||||||||    
T  28745863 ggtgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaaca 28745949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50005146 - 50005232
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| ||| | |||||||||||    
T  50005146 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaaca 50005232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 26501077 - 26501154
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 4038159 - 4038234
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  4038159 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 8224843 - 8224764
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||  |||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagg 8224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32572989 - 32573072
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    ||||||||||||||||||||| || ||||||  | ||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  32572989 ggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 47165210 - 47165285
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 27804349 - 27804426
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| |||||||||||||||| || |||||||||||| |||||||||||| | ||||||||||| |||||||    
T  27804349 gaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 38277489 - 38277412
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||  | |||||||||| ||||||||    
T  38277489 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 45565469 - 45565400
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  45565469 gaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaaca 45565400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38277482 - 38277567
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||| ||| || |||||| || ||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  38277482 ggtgaattatattgtttaaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata-ttccccatccaaaca 38277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 43622977 - 43623055
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||| ||||||||| || ||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  43622977 aattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagg 43623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45565461 - 45565515
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  45565461 ggtgaattctattgtttaaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37214911 - 37214842
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaac 70  Q
    ||||||||||||||||||||| || |||||| || |||||||| |||||||||||||||| |||||||||    
T  37214911 ggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 29446810 - 29446746
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| | |||||| |||||||||    
T  29446810 tagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttagg 29446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 6470692 - 6470759
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||    
T  6470692 ctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 28632584 - 28632662
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||| || |||||||||| ||| |||||    
T  28632584 gaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattagg 28632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 32287940 - 32288007
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| || | ||||||||||| ||||||    
T  32287940 tcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 44410386 - 44410319
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| |||||| ||||||||||| || ||||||||||||||||||||||||||  ||||||||||    
T  44410386 gaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaa 44410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 44570753 - 44570687
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    ||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  44570753 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 49659291 - 49659214
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||||| || |||||||||  |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaataca-ttccccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50005154 - 50005077
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||||| |||||||    
T  50005154 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 37036956 - 37037016
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaaca 37037016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44410378 - 44410473
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaag-tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||| ||||| || ||||||  || ||||||||||||||||| ||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  44410378 ggtgaattctattgtctgaatcca-ctcaaaaataattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5474491 - 5474437
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||||    
T  5474491 ggtgaattctattgtttgaattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 37448399 - 37448465
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    |||||||  |||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 47074223 - 47074177
Alignment:
Q  5 aattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  47074223 aattctattgtttgaattcacctcaaagtagttgaattccttcaaaa 47074177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5474483 - 5474528
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  5474483 gaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 28745854 - 28745805
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  28745854 ttgaattccctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31166385 - 31166308
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| |||||| || ||| ||||| |||||||||||||||  ||||||||||| || |||||||||| |||||||    
T  31166385 gaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 17502270 - 17502222
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  17502270 tgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 37447900 - 37447968
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaac 86  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||    
T  37447900 gaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 34007417 - 34007452
Alignment:
Q  16 ttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  34007417 ttgaattcaactcaaagtagttgaattccctcaaaa 34007452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 34007416 - 34007382
Alignment:
Q  17 tgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    |||||||||||||||||||||||||||||||||||    
T  34007416 tgaattcaactcaaagtagttgaattccctcaaaa 34007382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 946440 - 946376
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  946440 caaagtatttaaattccctcaaaacaatacattccctcaaagcattt-ctcatccaaacacactct 946376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 15245495 - 15245454
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttaggat 15245454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17502264 - 17502301
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17502264 gaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 32572997 - 32572960
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32572997 gaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 40264105 - 40264068
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  40264105 gaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 49216344 - 49216412
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaaca-ttacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||| |||||||||||| ||||| |||| |||  ||||||||||||| |||||||||| |||||    
T  49216344 ctcaaagtatttgaattccctcgaaacatttacgttctttcaaaacatttccacatccaaacacactct 49216412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 946988 - 946933
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||| |||| |||| ||||||| |||||||| | |||||||||||||||||||    
T  946988 gaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacatt 946933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  53 attacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 25889243 - 25889169
Alignment:
Q  7 ttctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatcc 82  Q
    ||||||||||||||| || |||||| || ||||||||| ||||||||||| ||| |||||||| ||| || |||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcc 25889169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 32652261 - 32652214
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||| |||||||||| |||||| |||||||||||||| |||||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaa 32652214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 34007441 - 34007480
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactcttagg 34007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 51847916 - 51847858
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||| | | ||||||||||||| |||||||||||| | |||||||||||    
T  51847916 aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaaca 51847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15245517 - 15245480
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  15245517 gaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 15245509 - 15245537
Alignment:
Q  1 ggtgaattctattgtttgaattcaactca 29  Q
    |||||||||||||||||||||||||||||    
T  15245509 ggtgaattctattgtttgaattcaactca 15245537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 15467961 - 15468009
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||    
T  15467961 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 23536152 - 23536188
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| || |||||||||||||||||||||||||||    
T  23536152 aattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 32572975 - 32572935
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaagga 32572935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17110961 - 17110866
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17110961 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 42711362 - 42711441
Alignment:
Q  16 ttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42711362 ttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 40046877 - 40046800
Alignment:
Q  20 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagg 40046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 3853691 - 3853616
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  3853691 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 3858149 - 3858074
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  3858149 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 17110953 - 17111028
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17110953 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3853683 - 3853769
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| || |||||| || |||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  3853683 ggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3858141 - 3858227
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| || |||||| || |||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  3858141 ggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 30435333 - 30435252
Alignment:
Q  5 aattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30435333 aattctattgtttaaattcaactcaaa-tagttaaattccctccaaacattacattccctcaaaacatttctccatccaaaca 30435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 13404917 - 13404833
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| |||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13404917 tgaattttattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaaca 13404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 33902732 - 33902667
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  33902732 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 13404912 - 13404976
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatcca 83  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 33377305 - 33377385
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||| | ||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagga 33377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33902732 - 33902829
Alignment:
Q  1 ggtgaattctattgttt-gaattcaactcaaagtagtt-gaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||  |||||||||| ||||||| |||||||| |||| |||||||||    
T  33902732 ggtgaattctattgttttgaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacacactcttagg 33902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 4156251 - 4156320
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  4156251 gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaaca 4156320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 23011809 - 23011732
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 14800056 - 14800119
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  14800056 aagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 24045035 - 24044960
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| || |||||||||| |||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29257359 - 29257434
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44889429 - 44889354
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||  |||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 14312 - 14235
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||| | ||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  14312 aattcaccccaaagtatttgaattcccttaaaacattacattccctccaaaca-ttccccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 28324671 - 28324745
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  28324671 aattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 36103167 - 36103097
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  36103167 tcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 29482815 - 29482884
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| | ||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaaca 29482884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 33986078 - 33986001
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||| ||||||||| |||||||| |||||||||||||||| | |||| ||||| ||||||||||||| ||||||||    
T  33986078 aattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 44346686 - 44346755
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaaca 44346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 38573485 - 38573433
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38573485 tgaattctattgtttgaattcaactaaaagtagttgaatttcctcaaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 14991749 - 14991690
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 35979012 - 35979081
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| ||||||||||||  || ||||||||||||||||||||| | |||||||||||    
T  35979012 gaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaaca 35979081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 8049321 - 8049269
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttcccc 78  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  8049321 ctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 37268086 - 37268166
Alignment:
Q  13 tgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||| || |||||| || || |||||||||||||||||||||| |||||||| ||| ||| ||||||||| |||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 31807483 - 31807409
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||  || |||||||||||||||||||||||||||| ||||||||||||  | |||||||||| |||||    
T  31807483 gaattcaactttaaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 515549 - 515615
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||| ||||| ||||||||||||||| |||||||||| | ||||||||||| |||||    
T  515549 tcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 38573479 - 38573524
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  38573479 gaattcaactcaaagtagttgaatttcctcaaaacactacattccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 40046872 - 40046929
Alignment:
Q  16 ttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||| || |||||| || ||||||||||||||||||||||||| ||||||||||||    
T  40046872 ttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacatt 40046929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27322687 - 27322734
Alignment:
Q  48 aaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 32626069 - 32626120
Alignment:
Q  45 ctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 8689207 - 8689248
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacatt 60  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacattacatt 8689248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 11744727 - 11744804
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || ||| |||||||||||| ||| |||||||||||||||| ||| |||  | |||||||||| |||||||    
T  11744727 gaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 14800014 - 14799973
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttaggat 14799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 32626068 - 32626023
Alignment:
Q  16 ttgaattcaactcaaagtagttgaattccctcaaaacattacattc 61  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||    
T  32626068 ttgaattcaccttaaagtagttgaattccctcaaaacattatattc 32626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 42740005 - 42739969
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||||||||||||||||||||||||    
T  42740005 aattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 1088303 - 1088362
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| |||||||||| ||||||| ||||||||||| | ||| ||||||| |||||||    
T  1088303 ttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 30435350 - 30435385
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  30435350 attccctcaaaacatttccccatccaaacacactct 30435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 42711359 - 42711324
Alignment:
Q  20 attcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42711359 attcaactcaaagtagttgaatttcctcaaaacatt 42711324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 13144658 - 13144616
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacatt 60  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||    
T  13144658 gaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14800052 - 14799999
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| ||||||||||| ||| |||||| ||||| |||||||||||||||||    
T  14800052 ggtgaattttattgtttgaactcacctcaaa-tagtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 9982711 - 9982643
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| |||||| || || ||||| |||||||||||||||| ||| |||||| ||| |||||||||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaaca-ttctccatccaaaca 9982643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 26520447 - 26520484
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  26520447 gaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 30444941 - 30444978
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  30444941 gaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34008856 - 34008819
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  34008856 gaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 4156257 - 4156229
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaa 31  Q
    |||||||||||||||||||||||||||||    
T  4156257 tgaattctattgtttgaattcaactcaaa 4156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 29611444 - 29611408
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  29611444 aattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 42711335 - 42711295
Alignment:
Q  62 cctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||||||||||||||||||||| ||||| ||| ||||    
T  42711335 cctcaaaacatttccccatccaaacacactctaaggttttt 42711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7352879 - 7352976
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7352879 ggtgaattctattgtttgaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagga 7352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 857306 - 857398
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  857306 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28845938 - 28846030
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28845938 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 49111382 - 49111471
Alignment:
Q  4 gaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  49111382 gaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1107144 - 1107046
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccc-tcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||| |||||| |||||||||| ||||||||||    
T  1107144 ggtgaattctattgtttgaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttagga 1107046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1112679 - 1112595
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttaggattttt 1112595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11041059 - 11040968
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  11041059 ggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaata-ttccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4896716 - 4896794
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 15660267 - 15660342
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  15660267 gaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41498557 - 41498651
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||| |||||| |||||| || ||||||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||||    
T  41498557 ggtgaattctattgtttaaattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 15660273 - 15660180
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  15660273 tgaattctattgtttgaatccatctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 10128058 - 10128125
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  10128058 gaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 36455982 - 36455907
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  36455982 gaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31473923 - 31473849
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  31473923 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42844610 - 42844696
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| ||  ||||| || |||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  42844610 ggtgaattctattgtttgaatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaaca 42844696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 10633106 - 10633038
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  10633106 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaaca 10633038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 1539715 - 1539649
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  1539715 aattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 14982354 - 14982280
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  14982354 aattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 36456010 - 36456088
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || |||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| ||||||||    
T  36456010 gaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7352887 - 7352818
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7352887 gaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaaca 7352818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 28845946 - 28845877
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  28845946 gaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaaca 28845877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 42844618 - 42844541
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| | ||| |||||||    
T  42844618 gaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 10128064 - 10127980
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||| | |||||| ||| |||||||||||||    
T  10128064 tgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaaca 10127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26251001 - 26250905
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||| ||||||| || |||||| || ||||||| ||||||||||||||||| |||||||| ||| || |||||||||| ||| |||||    
T  26251001 ggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacactattagg 26250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 1112706 - 1112781
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||||| |||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 2125932 - 2125857
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 11348329 - 11348388
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  11348329 ctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaa 11348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 35470197 - 35470122
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4441395 - 4441338
Alignment:
Q  35 gttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  4441395 gttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 4441396 - 4441449
Alignment:
Q  2 gtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  4441396 gtgaattctattgtttgaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 467879 - 467960
Alignment:
Q  10 tattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||  ||||||| |||||||||| ||||||||||||||||| |||||||| ||| ||||||||||| |||||    
T  467879 tattgtttgaattcacttcaaagtggttgaattcc-tcaaaacattacattccatcaaaaca-ttctccatccaaacacactct 467960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 1107136 - 1107203
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| || | |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  1107136 gaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 4896715 - 4896648
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| || ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  4896715 ctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 16516237 - 16516171
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| || |||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  16516237 tcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 857314 - 857266
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  857314 gaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 5715810 - 5715744
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||||| |||||||||||||||||  ||||||||||| || |||||||||| |||||    
T  5715810 tcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 31742874 - 31742924
Alignment:
Q  44 cctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 41139548 - 41139473
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || |||||| ||||||| ||||||||||||||||| ||||||| |  ||||||||||||||| |||||||    
T  41139548 gaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaagc--ttccccatccaaacacactctta 41139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 55266860 - 55266934
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| || ||||||||||||||||||||||| |||| ||| ||||||||||||   ||||||||||| |||||    
T  55266860 aattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14982347 - 14982396
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  14982347 ggtgaattttatt-tttgaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 19461743 - 19461801
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||| || |||||||| |||||||||||||||| | |||||| |||||||||||||||    
T  19461743 tcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 26250993 - 26251030
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  26250993 gaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 42542979 - 42543020
Alignment:
Q  46 tcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaaca 42543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 41498565 - 41498489
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaa-cattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||| ||||||||||||||||| |||||  ||| ||||||||| | ||||||||||||| |||||    
T  41498565 gaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26534558 - 26534523
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| ||||||||||||||||||||||||||||    
T  26534558 caaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 32725003 - 32724961
Alignment:
Q  5 aattctattgtttgaattcaactcaaagtagttgaattccctc 47  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||    
T  32725003 aattctattgtttgaactcacctcaaagtaattgaattccctc 32724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  5 aattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    ||||||||||||||||| || |||||| || ||||||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 31742843 - 31742782
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| || ||||||||||||||||||||||| | ||| |||| ||| | |||||||||||    
T  31742843 ctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaaca 31742782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 31947655 - 31947588
Alignment:
Q  31 agtagttgaattccctcaaaacattaca---ttccctcaaaacatttccccatccaaacagactctta 95  Q
    |||| ||||||||||||  |||||||||   |||||||||||||||  |||||||||||| |||||||    
T  31947655 agtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaacatactctta 31947588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36455974 - 36456007
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagta 34  Q
    |||||||||||||||||||||||| |||||||||    
T  36455974 ggtgaattctattgtttgaattcacctcaaagta 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42775680 - 42775643
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  42775680 gaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 42776711 - 42776635
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||| || |||||| |||||||  |||||||||||||||  ||| ||||||||   ||||||||||| |||||||    
T  42776711 aattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactctta 42776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 52493978 - 52493924
Alignment:
Q  39 aattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||| ||||||||| | |||||||||| ||||||||||||| |||||||    
T  52493978 aattccctcaaa-cattacattacttcaaaacatt-ccccatccaaacacactctta 52493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44692889 - 44692999
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||    
T  44692889 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagggtt 44692988  T
Q  101 tttctaaaata 111  Q
    | | |||||||    
T  44692989 tctttaaaata 44692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 27251963 - 27252057
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  27251963 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 9129413 - 9129505
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  9129413 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 9137520 - 9137612
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  9137520 tgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 39110485 - 39110394
Alignment:
Q  2 gtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||| |||||    
T  39110485 gtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28092306 - 28092214
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||    
T  28092306 ggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 46672800 - 46672875
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  46672800 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5415875 - 5415782
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||||||||||| | ||| || ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  5415875 ggtgaattctattgtttgtactcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 49457418 - 49457333
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  49457418 gaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggaatttt 49457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 31070481 - 31070415
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31070481 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca-ttccccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 44436333 - 44436254
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| || ||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44436333 gaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44436325 - 44436384
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44436325 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 34088646 - 34088568
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 21307529 - 21307598
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaaca 21307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 46429463 - 46429555
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||| |||||||| ||| || |||||||||| |||||    
T  46429463 ggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 36397986 - 36398061
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44692897 - 44692822
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  44692897 gaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 42005951 - 42006029
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||| ||||| ||| || |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  42005951 aattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 42006029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 47767506 - 47767432
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  47767506 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 9129419 - 9129342
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||| |||||||    
T  9129419 gaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 9137526 - 9137449
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||| |||||||    
T  9137526 gaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 25655387 - 25655335
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25655387 tgaattctattatttgaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31070473 - 31070541
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaa 69  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| ||||||||    
T  31070473 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaa 31070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47284293 - 47284385
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||  | |||||| || ||||||||||||||||||||||||| |||||||| |||  | |||||||||| |||||    
T  47284293 ggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 5415867 - 5415942
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  5415867 gaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 37054468 - 37054394
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  37054468 aattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 53129840 - 53129918
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| | ||||||| ||||||||||| |||||||||||||||||| ||||||| || |||||||||| ||||||||    
T  53129840 gaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 53470427 - 53470501
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| | ||||||| |||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||    
T  53470427 aattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 35279920 - 35279980
Alignment:
Q  39 aattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttaggat 35279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 332067 - 332012
Alignment:
Q  1 ggtgaattctattgttt-gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  332067 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 19475891 - 19475824
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||| | |||||||||    
T  19475891 gaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 671616 - 671694
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||| ||| ||||||| | ||||||||    
T  671616 gaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 7302421 - 7302344
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||| |||  |||||||| |||||||||||||||| ||||||||||| || |||||||||| |||||||    
T  7302421 gaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 30766628 - 30766573
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  30766628 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacatt 30766573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 37321625 - 37321558
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||| || |||||||||||||| |||||||||||||| || |||||||| ||| |||||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 48947680 - 48947605
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| |||||||| ||||||||| |||||||||||||||||||   ||||||||||| |||||    
T  48947680 gaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 46635921 - 46635857
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||| | |||||||||| |||||    
T  46635921 aaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 30767167 - 30767112
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||| |||||||||||    
T  30767167 aagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 31189402 - 31189449
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  31189402 ctcaaagtatttgaattctctcaaaacattacattacctcaaaacatt 31189449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  37 tgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||| |||||||||||| |||||||| ||| | ||||||||||| ||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39215905 - 39215991
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||||| || |||||| || |||||||  |||||||||||| ||| |||||||| |||  | ||||||||||    
T  39215905 ggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaaca 39215991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||| | |||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 42130749 - 42130688
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||||  |||||||| ||| ||||| ||||||| ||| |||||    
T  42130749 ttgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattagg 42130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 52527103 - 52527042
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||| |||||||||  || |||||||||| || |||||||||| |||||||||||||    
T  52527103 ctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaaca 52527042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 2732683 - 2732639
Alignment:
Q  49 aaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 7976623 - 7976539
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatc-caaacagactcttaggattt 101  Q
    ||||||| ||||| ||| || |||||| ||||||||||||||||| ||||||||||  | ||||  ||||| |||||||||||||    
T  7976623 gaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatctaaaacacactcttaggattt 7976539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 25655350 - 25655315
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  25655350 attccctcaaaacatttccccatccaaacacactct 25655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 25655403 - 25655441
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  25655403 attccgtcaaaacatttccccatccaaacacactcttag 25655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 47336929 - 47336891
Alignment:
Q  45 ctcaaaacattacattccctcaaaacatttccccatcca 83  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  47336929 ctcaaaacattacattaccttaaaacatttccccatcca 47336891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 332059 - 332096
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  332059 gaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 19475964 - 19475923
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  19475964 ctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 25655381 - 25655418
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  25655381 gaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 27251969 - 27251932
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  27251969 gaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 27485521 - 27485492
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||||||||    
T  27485521 ctcaaagtagttgaattccctcaaaacatt 27485492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 42130776 - 42130821
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| ||||||||| ||||||||||| |||| |||||||||||    
T  42130776 gaattcacctcaaagtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 46429471 - 46429434
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  46429471 gaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40809433 - 40809337
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  40809433 ggtgaattttattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttagg 40809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9764405 - 9764497
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  9764405 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2316446 - 2316537
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  2316446 ggtgaattctattgtttgaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacattt-tccatccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15374052 - 15373960
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||    
T  15374052 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20523225 - 20523133
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||| |||||    
T  20523225 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 15804400 - 15804322
Alignment:
Q  15 tttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32390039 - 32390134
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||  |  ||||||||| ||||||||    
T  32390039 ggtgaattctattatttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 32470953 - 32471044
Alignment:
Q  5 aattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| |||||||||| ||||| ||||    
T  32470953 aattctattatttgaattcaactcaaagtagttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacactctaagga 32471044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 2721557 - 2721624
Alignment:
Q  20 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 2721624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 28828417 - 28828500
Alignment:
Q  4 gaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  28828417 gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaaca 28828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 927377 - 927299
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16515096 - 16515011
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  16515096 ggtgaattctattgttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaaca-ttctccatccaaaca 16515011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 15374044 - 15374121
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  15374044 gaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 25935285 - 25935370
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    ||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttagaattttt 25935370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 40643916 - 40643981
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  40643916 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagga 40643981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 23092031 - 23092123
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||| | |||||||| || |||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  23092031 tgaattctattttctgaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6634106 - 6634012
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||||    
T  6634106 ggtgaattctattgtttgaattca-ctcgaaataattgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 26281264 - 26281339
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 37722889 - 37722964
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 2316442 - 2316376
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  2316442 aaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 3563352 - 3563278
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 9764413 - 9764335
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  9764413 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 20523217 - 20523291
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  20523217 gaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40090409 - 40090487
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 41762210 - 41762290
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagga 41762290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 22767027 - 22766952
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 33245367 - 33245446
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||| ||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||| ||||    
T  33245367 gaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 16515102 - 16515180
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||  | |||||||||| ||||||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 22303866 - 22303940
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  22303866 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 32470942 - 32470872
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||    
T  32470942 tagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactcttaggcttttt 32470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40643910 - 40643856
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40643910 ggtgaattctattgtttgaatttaactcaaagtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 40809426 - 40809508
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    |||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||    
T  40809426 aattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactctaaggattt 40809508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 32250093 - 32250169
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  32250093 gaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaaca-ttccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 15804399 - 15804447
Alignment:
Q  39 aattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaaca 15804447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 19533903 - 19533971
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  19533903 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaaca 19533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 23092037 - 23091963
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  23092037 gaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaata-ttccccatcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 37145497 - 37145564
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaac 86  Q
    |||||| ||||||||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  37145497 aattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 9894317 - 9894386
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| |||||||||||   |||||||||||||||||||||||| |||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaaca 9894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 28828422 - 28828373
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 28828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 34982288 - 34982212
Alignment:
Q  20 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||| || ||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagg 34982212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 5658821 - 5658772
Alignment:
Q  48 aaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttagg 5658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 32390047 - 32389978
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || | ||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||    
T  32390047 gaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaaca 32389978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 10314724 - 10314646
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||  ||||| || ||||||||||| |||| |||||||| | |||||||||||| ||||||||||| ||||||||    
T  10314724 gaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactcttag 10314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 13243514 - 13243453
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatc--caaacagactcttagg 97  Q
    |||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagg 13243453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 35379409 - 35379344
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| | |||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||    
T  35379409 tcaaagaatttgaattccctcaaaacattacattatctcaaaaca-ttccccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 14834898 - 14834830
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| ||| ||||||| |||||||||||||||||| |||||||  ||||| ||||||    
T  14834898 aattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaaca 14834830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattc 61  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 6634098 - 6634167
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||||||||| ||| | |||| ||||||||||||| |||  || |||||||||||||    
T  6634098 gaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaaca 6634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22305169 - 22305132
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  22305169 gaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 2550363 - 2550324
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagg 2550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 13243514 - 13243557
Alignment:
Q  44 cctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaaca 13243557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15270849 - 15270886
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  15270849 gaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17542356 - 17542393
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  17542356 gaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 20320653 - 20320698
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  20320653 caaagtatttgaattcccttaaaatattacattccttcaaaacatt 20320698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 33146248 - 33146211
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  33146248 gaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 28490067 - 28490031
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacat 54  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  28490067 gaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40854036 - 40854135
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaatt-ccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  40854036 ggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttaggat 40854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40110804 - 40110901
Alignment:
Q  1 ggtgaattctattgttt-gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  40110804 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttagg 40110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2057487 - 2057392
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2057487 ggtgaattttattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 49052877 - 49052784
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | |||||||||| |||||||    
T  49052877 ggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44915287 - 44915192
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||  | |||||||||| ||||||||    
T  44915287 ggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 43955592 - 43955514
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  43955592 gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 40110812 - 40110735
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  40110812 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 44208099 - 44207967
Alignment:
Q  113 taccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaagcgaaactgagcaaatgacc 212  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  ||      ||||||||| ||||| |||||| |||||    
T  44208099 taccttccatccatgccaagaattatgactgtattcttttgtacaccaaaagcaactgtgtactgagtaccctcatgcaagtgaaaccgagcaactgacc 44208000  T
Q  213 actctgaattgaaatactttggcaacactcctg 245  Q
    ||||||||||||||||||| |||||||||||||    
T  44207999 actctgaattgaaatacttgggcaacactcctg 44207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 31632797 - 31632714
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttagaattt 31632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 5644752 - 5644674
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||    
T  5644752 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 21635969 - 21636038
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21635969 gaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 29065894 - 29065817
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||    
T  29065894 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34388332 - 34388429
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| ||||| ||||    
T  34388332 ggtgaattccattgtttgaactcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactctaagga 34388429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5644744 - 5644836
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||  || |||||| || ||||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  5644744 ggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29065886 - 29065978
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||    
T  29065886 ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 26162121 - 26162196
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 35776939 - 35777017
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 43955609 - 43955667
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43955609 aaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 43955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 46482015 - 46482104
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||| ||||||| |||| |||||| |||||    
T  46482015 tgaattctattgtttgaattcaactcaaa-tagttgaattttctcaaaacattacattccttcaacacatttctccattcaaacacactct 46482104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 34398940 - 34399008
Alignment:
Q  26 ctcaaagtagttgaattc-cctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  34398940 ctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 28539152 - 28539227
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 6498758 - 6498824
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  6498758 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 39342626 - 39342703
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 14603256 - 14603324
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  14603256 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 21635975 - 21635883
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||| || |||||| || |||||| |||||||||||||||||| |||||||| |||  ||||||||| || |||||||    
T  21635975 tgaattctattgtttgaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 2057491 - 2057554
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  2057491 aagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 34388340 - 34388262
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || ||||||||||||||| |||| |||||||| || |||||||| ||||||||||||||||| ||||||||    
T  34388340 gaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23455231 - 23455300
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaaca 23455300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 25189219 - 25189292
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatt 100  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||| ||||    
T  25189219 tcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactcttaagatt 25189292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 35455869 - 35455804
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  35455869 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 9784925 - 9784989
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||    
T  9784925 caaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 30524329 - 30524253
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||| | ||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||| ||| |||||||    
T  30524329 aattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 23548595 - 23548670
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| ||||||| |||||||||| ||||||||||||||||||| | ||||||||||| |||||    
T  23548595 gaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29639199 - 29639276
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| |||||| || ||||||| ||||| ||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 46069466 - 46069421
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  46069466 gaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 43791162 - 43791098
Alignment:
Q  21 ttcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  43791162 ttcacctcaaagtatttgaattccctcaaaacattacattccctc--aacttttcctcatccaaaca 43791098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46069458 - 46069541
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||  ||||||||||| |||| ||| ||| |||||||||||||    
T  46069458 ggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc-aaatattcccccatccaaaca 46069541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 49052869 - 49052935
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  49052869 gaattcaccttaaagtagttgaattccctcaaaacattacatt-cctc-aaaca-ttccccatccaaaca 49052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 30629131 - 30629063
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| | ||||||| || ||||| || |||||| ||||||||||||||||||| |||||||||||||    
T  30629131 aattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaaca 30629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 18789230 - 18789305
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||| ||||||||||||| ||||||| |||| ||||||| ||| | ||||||||||| |||||    
T  18789230 gaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 22391572 - 22391655
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||| |||||| || || ||||| |||||||||||||||||||||||||||||  | ||| |||||| ||| ||| ||||||    
T  22391572 aattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacacacttttaagatttt 22391655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    |||||||| |||||||||||||||| || ||||||||| ||||||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 46482006 - 46481943
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||| |||| ||||||||||||||||||  || ||| |||| |||||||||||| ||||||||    
T  46482006 tagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  46 tcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||| |||||||| ||| | ||||||||||| |||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 31632869 - 31632828
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  31632869 ctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 40854044 - 40854007
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  40854044 gaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44915279 - 44915324
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| || | |||||||||||||||||||||||||| ||||||    
T  44915279 gaattcaccttagagtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 14790187 - 14790151
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  14790187 aattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 18789592 - 18789544
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||| ||||    
T  18789592 gaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 32650647 - 32650611
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  32650647 aattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14537291 - 14537198
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14537291 ggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 784885 - 784790
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  784885 ggtgaattctattgtttgaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14365793 - 14365698
Alignment:
Q  1 ggtgaattctattgttt-gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  14365793 ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11716500 - 11716408
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  11716500 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 27033565 - 27033488
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  27033565 gaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41461607 - 41461512
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||| || |||||| || || |||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  41461607 ggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 41461599 - 41461674
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41461599 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 17180372 - 17180295
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  17180372 gaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 10480194 - 10480116
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 14365793 - 14365858
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  14365793 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 28740662 - 28740602
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaaca 28740602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 784877 - 784952
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  784877 gaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 13017854 - 13017779
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 33189255 - 33189338
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagaattt 33189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11684657 - 11684711
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11684657 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 769111 - 769034
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11532251 - 11532320
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaaca 11532320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 11793970 - 11793901
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaaca 11793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 11141379 - 11141303
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  11141379 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 11684656 - 11684596
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 1583807 - 1583882
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11824772 - 11824718
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11824772 ggtgaattatattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 30698355 - 30698289
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  30698355 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 7228018 - 7228087
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||| ||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  7228018 ctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 35047677 - 35047752
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| | ||||||| ||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  35047677 gaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 39630282 - 39630223
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||    
T  39630282 ttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 44256181 - 44256259
Alignment:
Q  8 tctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||| |||||| || | ||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaaca 44256259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14954359 - 14954257
Alignment:
Q  1 ggtgaattctattgttt-gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    ||||||||||||||||| ||||| |  | ||||||||||||||| || |||| ||||||||| ||||||||||| | | ||||||||| ||||||| |||    
T  14954359 ggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactcttaagat 14954260  T
Q  100 ttt 102  Q
    |||    
T  14954259 ttt 14954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 3092347 - 3092279
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||| | ||||||||| | ||||||||    
T  3092347 caaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 45094480 - 45094544
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| || ||| |||||| |||||    
T  45094480 aaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 3345816 - 3345867
Alignment:
Q  5 aattctattgtttgaattcaactcaaagta-gttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3345816 aattctattgtttgaattcacctcaaagtacgttgaattccctcaaaacatt 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 8735911 - 8735844
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||||||| | |||||||||||| |||||    
T  8735911 ctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 10244240 - 10244177
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||| |||||||| || |||  |||||||||||| |||||    
T  10244240 aagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10244244 - 10244298
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  10244244 ggtgaattttattgtttgaactcacctcaaagtagttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17905729 - 17905651
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| |||||| || ||||||||| | |||||||||||||| ||||||||||| || ||||| |||| ||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 7167666 - 7167714
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  7167666 aattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14954351 - 14954393
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacatt 60  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  14954351 gaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 40026139 - 40026070
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||| || |||| ||||||||||||| ||| |||||||| ||| |||||| ||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 11607296 - 11607257
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattac 57  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  11607296 gaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27033557 - 27033607
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaa 51  Q
    ||||||||||||||||||||| || ||||||  | ||||||||||||||||    
T  27033557 ggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 41585710 - 41585748
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  41585710 attccctcaaaacatttcaccatccaaacacactcttag 41585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 3345852 - 3345881
Alignment:
Q  58 attccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||    
T  3345852 attccctcaaaacatttccccatccaaaca 3345881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8736439 - 8736476
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  8736439 gaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 11532176 - 11532217
Alignment:
Q  26 ctcaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  11532176 ctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 14537283 - 14537320
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  14537283 gaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 44205678 - 44205707
Alignment:
Q  58 attccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaaca 44205707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 11824765 - 11824801
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||| || |||||||||||||||||||||||||||    
T  11824765 aattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 472 - 558
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  472 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 468 - 402
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||||    
T  468 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2121 - 2035
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2121 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 2035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2125 - 2191
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||||    
T  2125 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6919800 - 6919714
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  6919800 ggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaaca 6919714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 776172 - 776080
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  776172 ggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 9285722 - 9285647
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  9285722 gaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 8574760 - 8574829
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagga 8574829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 9763087 - 9763018
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9763087 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaaca 9763018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8574759 - 8574695
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 776164 - 776242
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  776164 gaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9763079 - 9763173
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||| || |||| | || ||||||||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||    
T  9763079 ggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 15299510 - 15299577
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaaca-ttccccatccaaaca 15299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 34244987 - 34245062
Alignment:
Q  27 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||| ||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggtttt 34245062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 6919808 - 6919870
Alignment:
Q  35 gttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  6919808 gttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagg 6919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 28918239 - 28918162
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  28918239 aattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9285716 - 9285768
Alignment:
Q  3 tgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9285716 tgaattctattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29889432 - 29889507
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||  |||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||| |||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 13487349 - 13487275
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||| |||||    
T  13487349 aattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15299471 - 15299419
Alignment:
Q  21 ttcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacatt 15299419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 15832540 - 15832472
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||| || ||||||| || ||||||||||    
T  15832540 aattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaaca 15832472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 1368552 - 1368477
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||  | ||||||||||| |||| ||||||||| ||||||||||| | ||||||||||| |||||    
T  1368552 gaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 8475214 - 8475176
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacactcttag 8475176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  53 attacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 34364818 - 34364770
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  34364818 gaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 15299505 - 15299474
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattc 61  Q
    ||||||||||||||||||||||||||||||||    
T  15299505 aagtagttgaattccctcaaaacattacattc 15299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 1195384 - 1195343
Alignment:
Q  60 tccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    |||||||||||||| ||||||||||||| |||||||| ||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttagtattt 1195343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 6358249 - 6358302
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 71  Q
    ||||||| | ||||||| || ||||| |||||||||||||||| ||||||||||    
T  6358249 gaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaaca 6358302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9697537 - 9697489
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||  |||||||| ||||||||| ||||||||| |||||||||||    
T  9697537 gaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 42072 - 41997
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 56366 - 56304
Alignment:
Q  1 ggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  56366 ggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 56358 - 56427
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||    
T  56358 gaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaaca 56427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 83018 - 82949
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaaca 82949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 4150 - 4071
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| |   ||||||||| |||||||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 2941 - 2867
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| |||||| || |||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||||    
T  2941 gaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7216 - 7157
Alignment:
Q  28 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||    
T  7216 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 7157  T

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Target: scaffold0129 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 19272 - 19194
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| |||||| || ||||||||| |||||||||||||||||||||||| | | ||||||||||||| ||| |||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacacttttagg 19194  T

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Target: scaffold0129; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 19784 - 19851
Alignment:
Q  19 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| |||||||  || |||||||||||||||||||||||| | |||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaaca 19851  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 10961 - 10906
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  10961 gaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacatt 10906  T

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Target: scaffold0400 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 4496 - 4570
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| | |||| || ||||||| ||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  4496 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 5140 - 5214
Alignment:
Q  18 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| | |||| || ||||||| ||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  5140 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 15874 - 15938
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||| |||||||| |||| | |||||||||||| ||||||| | ||||||||||||| |||||||    
T  15874 aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 15938  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2916 - 2980
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||| |||||||| |||| | |||||||||||| ||||||| | ||||||||||||| |||||||    
T  2916 aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 2980  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 109084 - 109040
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaaagatttt 109040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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