View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18948_low_5 (Length: 478)

Name: NF18948_low_5
Description: NF18948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18948_low_5
NF18948_low_5
[»] chr6 (63 HSPs)
chr6 (18-462)||(31284360-31284804)
chr6 (19-462)||(26623048-26623514)
chr6 (19-462)||(26729026-26729492)
chr6 (281-462)||(27592954-27593135)
chr6 (281-462)||(27679018-27679199)
chr6 (205-462)||(26861688-26861942)
chr6 (259-463)||(26884234-26884440)
chr6 (259-462)||(27610914-27611117)
chr6 (259-462)||(27718291-27718494)
chr6 (281-462)||(27677548-27677729)
chr6 (281-462)||(27724779-27724960)
chr6 (205-462)||(28781211-28781468)
chr6 (317-463)||(25481813-25481959)
chr6 (344-462)||(26646551-26646669)
chr6 (344-462)||(26752519-26752637)
chr6 (281-462)||(27706336-27706517)
chr6 (205-463)||(27337923-27338181)
chr6 (205-463)||(27398663-27398921)
chr6 (166-463)||(26656060-26656357)
chr6 (166-463)||(26762031-26762328)
chr6 (320-462)||(27604678-27604820)
chr6 (215-463)||(25579790-25580038)
chr6 (205-436)||(28786376-28786607)
chr6 (205-436)||(28792497-28792728)
chr6 (317-463)||(25538611-25538757)
chr6 (317-463)||(26048916-26049062)
chr6 (317-463)||(26070085-26070231)
chr6 (317-454)||(27698464-27698601)
chr6 (317-463)||(26055997-26056143)
chr6 (317-463)||(26075967-26076113)
chr6 (317-463)||(27427576-27427722)
chr6 (360-463)||(26142936-26143039)
chr6 (349-462)||(26823912-26824025)
chr6 (281-450)||(26949745-26949914)
chr6 (206-459)||(28227025-28227278)
chr6 (254-462)||(26802514-26802722)
chr6 (205-453)||(26848741-26848989)
chr6 (211-453)||(27214498-27214743)
chr6 (211-453)||(27234485-27234730)
chr6 (205-459)||(28242879-28243133)
chr6 (205-459)||(28234639-28234892)
chr6 (205-459)||(28297571-28297825)
chr6 (205-459)||(28514248-28514502)
chr6 (205-454)||(28139621-28139870)
chr6 (206-459)||(28181189-28181442)
chr6 (304-453)||(27531154-27531303)
chr6 (281-453)||(28098303-28098475)
chr6 (335-459)||(26937169-26937293)
chr6 (336-454)||(26341920-26342041)
chr6 (205-459)||(28185441-28185695)
chr6 (363-452)||(2184980-2185069)
chr6 (405-453)||(2184369-2184417)
chr6 (404-452)||(26975134-26975182)
chr6 (399-459)||(28150012-28150072)
chr6 (381-452)||(25071741-25071812)
chr6 (112-188)||(26623636-26623712)
chr6 (112-188)||(26729613-26729689)
chr6 (419-463)||(27229303-27229347)
chr6 (332-379)||(29826182-29826229)
chr6 (399-453)||(27665169-27665223)
chr6 (205-263)||(28098215-28098273)
chr6 (205-249)||(26937391-26937435)
chr6 (399-459)||(28325556-28325616)
[»] chr1 (3 HSPs)
chr1 (162-463)||(28127481-28127782)
chr1 (205-459)||(28164208-28164461)
chr1 (317-462)||(268314-268459)
[»] scaffold0277 (2 HSPs)
scaffold0277 (205-451)||(4529-4775)
scaffold0277 (205-462)||(13490-13747)
[»] chr8 (1 HSPs)
chr8 (317-462)||(29273740-29273885)
[»] chr4 (8 HSPs)
chr4 (317-462)||(18679524-18679669)
chr4 (344-462)||(18655461-18655579)
chr4 (317-462)||(18699357-18699502)
chr4 (349-462)||(18731493-18731606)
chr4 (349-462)||(18724074-18724187)
chr4 (317-463)||(18073833-18073979)
chr4 (308-452)||(5090915-5091059)
chr4 (399-463)||(17989092-17989156)
[»] scaffold0349 (2 HSPs)
scaffold0349 (281-451)||(3355-3525)
scaffold0349 (281-462)||(14290-14470)
[»] scaffold0003 (1 HSPs)
scaffold0003 (317-463)||(59641-59787)
[»] scaffold0419 (1 HSPs)
scaffold0419 (205-462)||(7597-7854)
[»] scaffold0038 (4 HSPs)
scaffold0038 (206-459)||(27523-27776)
scaffold0038 (205-459)||(34800-35054)
scaffold0038 (205-459)||(43041-43295)
scaffold0038 (399-459)||(116871-116931)
[»] scaffold0019 (1 HSPs)
scaffold0019 (332-459)||(58267-58394)
[»] chr2 (3 HSPs)
chr2 (205-452)||(17993542-17993789)
chr2 (399-459)||(3279763-3279823)
chr2 (205-249)||(3279988-3280032)
[»] chr5 (1 HSPs)
chr5 (311-378)||(16689167-16689234)


Alignment Details
Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 18 - 462
Target Start/End: Complemental strand, 31284804 - 31284360
Alignment:
Q  18 caatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaataactagtatttgtttaaatatataaataaaaaatgtttccc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31284804 caatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaataactaatatttgtttaaatatataaataaaaaatgtttccc 31284705  T
Q  118 ttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagac 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31284704 ttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagaaggctacccaggagaacgatggtcgccagac 31284605  T
Q  218 aagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctc 317  Q
    |||||||||||||| ||||||||||||||||| |||| || ||| ||||||| |||  | || | ||||||||||||||||||  |||| | ||||||||    
T  31284604 aagttagctgcttgagtaagagctatcttccatttttgcaacctttccatatgatctgtattatgttggaacctctcttcatgcttagccaatgcttctc 31284505  T
Q  318 cataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggac 417  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||  |||  |  |||||||||| |||||    
T  31284504 cataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggac 31284405  T
Q  418 aagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||||||||||||||| || |||||||||||||||| ||||||    
T  31284404 aagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaa 31284360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 19 - 462
Target Start/End: Complemental strand, 26623514 - 26623048
Alignment:
Q  19 aatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaa-taactagtatttgtttaaatatataaataaaaaat---gttt 114  Q
    |||||||| |||||||| || | ||| |||||||||||||| |||||||| |||||| || ||| |||||||||||||||||||| |||||||   ||||    
T  26623514 aatcacatttatatcttaacaattatgtcatacaattctaaatgttttgatatacaaatacctaatatttgtttaaatatataaacaaaaaattgtgttt 26623415  T
Q  115 cccttttaagcatttatatggaatgattgaggaataaaaattgaagaa----------------ggcaaaacaagattgaagtgaagtaggctacccagg 198  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||                ||||||||||||||||||||||||||||||||||||    
T  26623414 cccttttaagcattaatatggaatgattggggaataagaattgaagaaataaagcatatatgaaggcaaaacaagattgaagtgaagtaggctacccagg 26623315  T
Q  199 agaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattat---cctttttgttttggaacctctct 295  Q
    |  ||||||||| |||||||||||||||||||| | ||||||||||||||| |||| || ||||||||||||||     || || || |||||||||| |    
T  26623314 atgacgatggtctccagacaagttagctgcttgtgcaagagctatcttccatttttgcaacctctccatattatatgtattattattatggaacctcttt 26623215  T
Q  296 tcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtct 395  Q
     ||||  |||| |||||||| |||||||| ||  | ||||| || |  |||| |||||||||||||||||| |||||||||||| | |||| |||||| |    
T  26623214 gcatgcttagcaagtgcttcgccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttt 26623115  T
Q  396 tccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |  ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||| ||||||    
T  26623114 tgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaa 26623048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 19 - 462
Target Start/End: Complemental strand, 26729492 - 26729026
Alignment:
Q  19 aatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaa-taactagtatttgtttaaatatataaataaaaaat---gttt 114  Q
    |||||||| |||||||| || | ||| |||||||||||||| |||||||| |||||| || ||| |||||||||||||||||||| |||||||   ||||    
T  26729492 aatcacatttatatcttaacaattatgtcatacaattctaaatgttttgatatacaaatacctaatatttgtttaaatatataaacaaaaaattgtgttt 26729393  T
Q  115 cccttttaagcatttatatggaatgattgaggaataaaaattgaagaa----------------ggcaaaacaagattgaagtgaagtaggctacccagg 198  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||                ||||||||||||||||||||||||||||||||||||    
T  26729392 cccttttaagcattaatatggaatgattggggaataagaattgaagaaataaagcatatatgaaggcaaaacaagattgaagtgaagtaggctacccagg 26729293  T
Q  199 agaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattat---cctttttgttttggaacctctct 295  Q
    |  ||||||||| |||||||||||||||||||| | ||||||||||||||| |||| || ||||||||||||||     || || || |||||||||| |    
T  26729292 atgacgatggtctccagacaagttagctgcttgtgcaagagctatcttccatttttgcaacctctccatattatatgtattattattatggaacctcttt 26729193  T
Q  296 tcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtct 395  Q
     ||||  |||| |||||||| |||||||| ||  | ||||| || |  |||| |||||||||||||||||| |||||||||||| | |||| |||||| |    
T  26729192 gcatgcttagcaagtgcttcgccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttt 26729093  T
Q  396 tccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |  ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||| ||||||    
T  26729092 tgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaa 26729026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 27592954 - 27593135
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| |    
T  27592954 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttatgatgtcgcacatgagaaggatccacaccaaagaaaacaggcaaaacag 27593053  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  |||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  27593054 ggcgaccctttgtcttgtagcaatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaa 27593135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 281 - 462
Target Start/End: Complemental strand, 27679199 - 27679018
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| ||||| ||| ||||||| |||| ||||     
T  27679199 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaacagtaggttccacaccaaagaaaacaggcagaacga 27679100  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27679099 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 27679018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 462
Target Start/End: Complemental strand, 26861942 - 26861688
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||| | ||||| |  |||||  | | || ||||||||| |||||| | |  ||||| ||||| | ||||||  ||    
T  26861942 atggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgctta 26861843  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| |||||| ||||||||||||||||||||| || |||||||| |||||||||||| |||||||||  ||||| ||||  |||   |||||    
T  26861842 gccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcctt---gcagt 26861746  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  26861745 taatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaa 26861688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 463
Target Start/End: Complemental strand, 26884440 - 26884234
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||||||| |  ||||| ||||| | ||||||   ||| | |||||| |||||||||||| ||||||||||||||| || |||||||||     
T  26884440 cctctccatgttatccttatcattttgaaaccttttttcatggtcagccaatgcttcaccataactacctgtatgatgtcgcacatcagtaggatccaca 26884341  T
Q  359 ccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatg--atttggacaagttcgtccaaacaaaatgaagaagaggcatagttggt 456  Q
    |||   ||||| ||||||||| |||||| ||||||||   |||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||    
T  26884340 ccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatgacatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggt 26884241  T
Q  457 agaaaat 463  Q
    |||||||    
T  26884240 agaaaat 26884234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 462
Target Start/End: Original strand, 27610914 - 27611117
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||| ||| |  ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||    
T  27610914 cctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcactttagtaggttccacg 27611013  T
Q  359 ccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtag 458  Q
    ||  ||||||| ||||||||| |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| |||||||||||||||||| |||    
T  27611014 ccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatag 27611113  T
Q  459 aaaa 462  Q
    ||||    
T  27611114 aaaa 27611117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 462
Target Start/End: Original strand, 27718291 - 27718494
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||| ||| |  ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||    
T  27718291 cctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacg 27718390  T
Q  359 ccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtag 458  Q
    ||  ||||||| ||||||||| |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| |||||||||||||||||| |||    
T  27718391 ccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatag 27718490  T
Q  459 aaaa 462  Q
    ||||    
T  27718491 aaaa 27718494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 27677548 - 27677729
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||||  || ||| |||||  || ||||||| |||| ||||     
T  27677548 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacaatagtaggttccacagcaaagaaaacaggcagaacga 27677647  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27677648 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 27677729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 27724779 - 27724960
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||||  ||||||| |||||||||     
T  27724779 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacga 27724878  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  27724879 ggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaa 27724960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 205 - 462
Target Start/End: Complemental strand, 28781468 - 28781211
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| |||||||  |    
T  28781468 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgtcca 28781369  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| ||||||  |||| ||||||||||||||| || ||||||||| ||| ||||||| ||||||||| ||||||  ||||||||  |||| |    
T  28781368 gccaatgcttcaccataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28781269  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||| || || |||||||||||||| ||||||   |||| |||||||||| |||||||    
T  28781268 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaa 28781211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 25481959 - 25481813
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||||| | ||||| |||| |||| || ||||||||| |||||||||||||| || ||   || ||||||||||||  ||||||||||||| ||||    
T  25481959 ccataactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtgaatgatgtgga 25481860  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  25481859 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 25481813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 26646669 - 26646551
Alignment:
Q  344 tgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaag 443  Q
    |||| ||||||||||||||||||||||||||||||| | |||| |||||||||  |||| |||||||| ||||||||||||||||||||||||  |||||    
T  26646669 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26646570  T
Q  444 aggcatagttggtagaaaa 462  Q
    ||||||||||| |||||||    
T  26646569 aggcatagttgatagaaaa 26646551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 26752637 - 26752519
Alignment:
Q  344 tgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaag 443  Q
    |||| ||||||||||||||||||||||||||||||| | |||| |||||||||  |||| |||||||| ||||||||||||||||||||||||  |||||    
T  26752637 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26752538  T
Q  444 aggcatagttggtagaaaa 462  Q
    ||||||||||| |||||||    
T  26752537 aggcatagttgatagaaaa 26752519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 27706336 - 27706517
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| || || ||| | ||||| |||| ||||     
T  27706336 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttctacaccaaataaaacaggcagaacga 27706435  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  27706436 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaa 27706517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 463
Target Start/End: Original strand, 27337923 - 27338181
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| || |||||||| |||||||||||||| |||||||| || | || ||||||||| || ||||| || ||||||||| | ||||||||  ||    
T  27337923 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgctta 27338022  T
Q  305 gctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcag 403  Q
    |  || |||| | |||||||| ||  | |||||||| || |||| ||||||| | ||||||||||| |||||||| |  | || | |||||||  |||||    
T  27338023 gtaagatgct-caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcag 27338121  T
Q  404 tgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  27338122 tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaat 27338181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 463
Target Start/End: Original strand, 27398663 - 27398921
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| || |||||||| |||||||||||||| |||||||| || | || ||||||||| || ||||| || ||||||||| | ||||||||  ||    
T  27398663 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgctta 27398762  T
Q  305 gctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcag 403  Q
    |  || |||| | |||||||| ||  | |||||||| || |||| ||||||| | ||||||||||| |||||||| |  | || | |||||||  |||||    
T  27398763 gtaagatgct-caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcag 27398861  T
Q  404 tgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  27398862 tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaat 27398921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 166 - 463
Target Start/End: Complemental strand, 26656357 - 26656060
Alignment:
Q  166 aaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctcc 265  Q
    ||||||||||| |||| |||| || |||||  ||  || ||||| |||||||||||| || |||| ||| ||||| |||||||| |  |||| ||||| |    
T  26656357 aaaacaagatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgc 26656258  T
Q  266 atattatcctttttgttttggaacctctcttcatgtgtagctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatag 364  Q
    || || ||||| || ||||||||| ||| ||||||  |||  || |||| | || ||||| ||  | |||||||| |  |||| ||||||||| ||||||    
T  26656257 atgttttccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatag 26656159  T
Q  365 aaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    ||||| |||||||| |  | || |||||||||  |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26656158 aaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 166 - 463
Target Start/End: Complemental strand, 26762328 - 26762031
Alignment:
Q  166 aaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctcc 265  Q
    ||||||||||| |||| |||| || |||||  ||  || ||||| |||||||||||| || |||| ||| ||||| |||||||| |  |||| ||||| |    
T  26762328 aaaacaagatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgc 26762229  T
Q  266 atattatcctttttgttttggaacctctcttcatgtgtagctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatag 364  Q
    || || ||||| || ||||||||| ||| ||||||  |||  || |||| | || ||||| ||  | |||||||| |  |||| ||||||||| ||||||    
T  26762228 atgttttccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatag 26762130  T
Q  365 aaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    ||||| |||||||| |  | || |||||||||  |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26762129 aaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26762031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 320 - 462
Target Start/End: Original strand, 27604678 - 27604820
Alignment:
Q  320 taactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaa 419  Q
    ||||||||| |||||||||||||||||||||| ||||| ||| ||||||| |||||||||  ||||| ||||||| |  |||| |||||||| || ||||    
T  27604678 taactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaa 27604777  T
Q  420 gttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||| ||||||||||| |||||||||||||| ||| |||||||    
T  27604778 gttcatccaaacaaaaggaagaagaggcatatttgatagaaaa 27604820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 215 - 463
Target Start/End: Complemental strand, 25580038 - 25579790
Alignment:
Q  215 gacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgctt 314  Q
    ||||||||||| ||||||||||||||||||||||| |    ||  | |||||| || | ||  || ||||| ||||||||||||||  |||  ||    |    
T  25580038 gacaagttagcagcttgggtaagagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaagatact 25579939  T
Q  315 ctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttg 414  Q
    | |||||||| || || |||||||| |  |||| ||| |||||  |||||||||||||||| ||   || ||||||||||||  ||||||||||||| ||    
T  25579938 caccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtg 25579839  T
Q  415 gacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  25579838 gacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 25579790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 436
Target Start/End: Complemental strand, 28786607 - 28786376
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| ||||||   |    
T  28786607 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgccca 28786508  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || |||||| || ||| ||||||| ||||||||| ||||||  ||||||||  |||| |    
T  28786507 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28786408  T
Q  405 gaatgatttggacaagttcgtccaaacaaaat 436  Q
    |||| || || |||||||||||||| ||||||    
T  28786407 gaataatgtgaacaagttcgtccaagcaaaat 28786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 436
Target Start/End: Complemental strand, 28792728 - 28792497
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| ||||||   |    
T  28792728 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgccca 28792629  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || |||||| || ||| ||||||| ||||||||| ||||||  ||||||||  |||| |    
T  28792628 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28792529  T
Q  405 gaatgatttggacaagttcgtccaaacaaaat 436  Q
    |||| || || |||||||||||||| ||||||    
T  28792528 gaataatgtgaacaagttcgtccaagcaaaat 28792497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 25538757 - 25538611
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| ||| |||||  |||||||||||||||| ||   || ||||||||||||  ||||||||||||| ||||    
T  25538757 ccataactcccactctgatgtcgtaactgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatctgga 25538658  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  25538657 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 25538611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 26049062 - 26048916
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || ||||||||||| |  |||| ||| |||||  |||| ||||||||||| ||   || ||||||||||||  ||||||||||||| ||||    
T  26049062 ccataacttccactatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtgga 26048963  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  26048962 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26048916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 26070231 - 26070085
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || ||||||||||| |  |||| ||| |||||  |||| ||||||||||| ||   || ||||||||||||  ||||||||||||| ||||    
T  26070231 ccataacttccactatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtgga 26070132  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  26070131 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26070085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 317 - 454
Target Start/End: Original strand, 27698464 - 27698601
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||||||| ||||||||| ||||| ||  || ||||| ||  ||||||| ||||||||| |||||| ||||||||   |||||||||| || ||||    
T  27698464 ccataactacctttatgatgtctcacattagttggttccacaccgaagaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaattatgtgga 27698563  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttg 454  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27698564 caagttcgtccaaacaaaatgaagaagatgcatagttg 27698601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 26056143 - 26055997
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| ||| |||||  |||||||||||||||| ||   || ||||||||| ||  ||||||||||||| ||||    
T  26056143 ccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaatgatgtgga 26056044  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  26056043 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26055997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 26076113 - 26075967
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| ||| |||||  |||||||||||||||| ||   || ||||||||| ||  ||||||||||||| ||||    
T  26076113 ccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaatgatgtgga 26076014  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  26076013 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaat 26075967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 463
Target Start/End: Original strand, 27427576 - 27427722
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||| ||||||| ||||||||| ||| || ||| || ||  ||||||||||||| ||||    
T  27427576 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 27427675  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||  |||||||||| |||||||||| |||||||||| |||||||    
T  27427676 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaat 27427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 360 - 463
Target Start/End: Complemental strand, 26143039 - 26142936
Alignment:
Q  360 catagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||||||||| || ||   || ||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||    
T  26143039 catagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcaga 26142940  T
Q  460 aaat 463  Q
    ||||    
T  26142939 aaat 26142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 462
Target Start/End: Complemental strand, 26824025 - 26823912
Alignment:
Q  349 aggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggca 448  Q
    ||||||||| ||||||||||| ||||||||| |||| | ||||  |||  ||  | ||||||| ||||||||||||||||||||||||||||||||||||    
T  26824025 aggatccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggca 26823926  T
Q  449 tagttggtagaaaa 462  Q
    ||||||| ||||||    
T  26823925 tagttggcagaaaa 26823912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 281 - 450
Target Start/End: Complemental strand, 26949914 - 26949745
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    | ||||||||||| |||||||| || ||  |||||||||| |||| |||      
T  26949914 ttttggaacctctcttcatgcttagcaagtgcttcaccataactataattctgatgtcgcacgtgagaaggttctacatcatagaaaactggcagaacaa 26949815  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcata 450  Q
    ||||||  |||  |||  || |||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  26949814 ggcgacctttttccttgaagtagtgaatgatatggacaagttcgtctaaacaaaatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 459
Target Start/End: Complemental strand, 28227278 - 28227025
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  28227278 tggtggccagagaagttagcagtttgagtaagagccatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 28227179  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtg 405  Q
    | |||||||  |||||||| ||  | |||||||||||||||||||| |||||  |||||||||  ||||||||  |||| |  |||  |||  |||| ||    
T  28227178 ccagtgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatg 28227079  T
Q  406 aatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  28227078 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 462
Target Start/End: Complemental strand, 26802722 - 26802514
Alignment:
Q  254 tccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggat 353  Q
    |||| ||||||||| |||||||| |  ||||| ||||| | ||||||   ||| | |||||| ||||| |||| | ||||||| ||||||| || |||||    
T  26802722 tccaacctctccatgttatccttatcattttgaaaccttttttcatgctcagccaatgcttcaccatagctacatgtatgatggcgcacattagtaggat 26802623  T
Q  354 ccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    |||| ||| ||||||  ||||| ||| |||||| |||||||||  |||| ||||| || || |||||||||||||| ||||||   ||||||||||||||    
T  26802622 ccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagaggcatagtt 26802523  T
Q  454 ggtagaaaa 462  Q
    | |||||||    
T  26802522 gatagaaaa 26802514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 453
Target Start/End: Complemental strand, 26848989 - 26848741
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| || ||| |||||||| ||||||| ||   ||  | ||||||  | ||||| || ||||| |||  |||||||||  ||    
T  26848989 atggtggccagataagttagcagcatggttaagagctttcttccatttacgcaaacgctccatgctttccttgttattttgaaacacctcttcatgctta 26848890  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || |||||||| ||||||||||   | |||||||||||||||||||| || | |||||||||||| || | |||   || || ||||  |||  |||| |    
T  26848889 gcaagtgcttcaccataactactattctgatgtcgcacatgagaaggttctatgccatagaaaacaggaataaccatgctacccttttccttggagcaat 26848790  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  26848789 gaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagtt 26848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 453
Target Start/End: Complemental strand, 27214743 - 27214498
Alignment:
Q  211 gccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagt 310  Q
    |||||| |||||||| |||||| |||||||||||||||| || | || || |||||| || ||||| || ||||| ||||||||||||||  |||| ||     
T  27214743 gccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaagc 27214644  T
Q  311 gcttctccataactacctctat---gatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaa 407  Q
    ||||| ||||||||     | |   |||||||||  |||||||| || |||||||||||||| || | |||  ||||||  |||  |||  |||| |||     
T  27214643 gcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgag 27214544  T
Q  408 tgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||    
T  27214543 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 453
Target Start/End: Original strand, 27234485 - 27234730
Alignment:
Q  211 gccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagt 310  Q
    |||||| |||||||| |||||| |||||||||||||||| || | || || |||||| || ||||| || ||||| ||||||||||||||  |||| ||     
T  27234485 gccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaagc 27234584  T
Q  311 gcttctccataactacctctat---gatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaa 407  Q
    ||||| ||||||||     | |   |||||||||  |||||||| || |||||||||||||| || | |||  ||||||  |||  |||  |||| |||     
T  27234585 gcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgag 27234684  T
Q  408 tgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||    
T  27234685 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 28243133 - 28242879
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||||| ||| || |||||  ||||||| || | || ||||||||| |||||| |  | ||||||||| ||||   |||   |    
T  28243133 atggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgctattttggaacttctcaatatgctca 28243034  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || |||||||  |||||||| ||  | ||||||| ||| | |||||| |||||  |||||||||  ||||||||  |||| |  ||| |||| |||||||    
T  28243033 gccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagt 28242934  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  28242933 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28242879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 28234892 - 28234639
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| ||||||| || ||| |||||||| |||||||| || | || ||||||||| |||||||| || ||||||||| ||| |  |||   |    
T  28234892 atggtggccagaaaagttagatgtttgagtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatca 28234793  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  |||||||||  ||||||||  |||| || |||  ||   |||| |    
T  28234792 tccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactaggcgtctattttcctcgaagca-t 28234694  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
     |||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  28234693 aaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28234639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 459
Target Start/End: Original strand, 28297571 - 28297825
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || ||||||||| |||| ||| || ||||||||| |||||  |||   |    
T  28297571 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctctatatgatca 28297670  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
     | |||||||   ||||||| ||    |||||||||||||||||||| |||||  |||| ||||  ||||||||  | || ||  ||  |||  ||||||    
T  28297671 tccagtgctttagcataacttccatgttgatgtcgcacatgagaaggttccacatcataaaaaatcggcaaaactagacggctactttccttgaagcagt 28297770  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  28297771 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtaga 28297825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 28514502 - 28514248
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || ||||||||| |||| ||| || ||||||||| |||||  |||   |    
T  28514502 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctctatatgatca 28514403  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
     | |||||||   ||||||| ||    |||||||||||||||||||| |||||  |||| ||||  ||||||||  | || ||  ||  |||  ||||||    
T  28514402 tccagtgctttagcataacttccatgttgatgtcgcacatgagaaggttccacatcataaaaaatcggcaaaactagacggctactttccttgaagcagt 28514303  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  28514302 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtaga 28514248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 454
Target Start/End: Complemental strand, 28139870 - 28139621
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| ||||||||||||| | |||||||    ||||| |||  || ||| ||||| | ||||||||  ||||||||| || |||| ||  ||    
T  28139870 atggtggccagaaaagttagctgctttgttaagagcacatttccattttagcaacctatccatgtcatccttttgattttggaacttcacttcttgctta 28139771  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    |||| |||||| ||| |||   |  | |||||||| |  |||||||||||||| ||||||||||| ||||||||    |  | |||||| ||  ||||||    
T  28139770 gctattgcttcaccaaaacattcggtttgatgtcgaatgtgagaaggatccacaccatagaaaacaggcaaaaccaaacatccctttgtgttgaagcagt 28139671  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttg 454  Q
     |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  28139670 caatgatgtggacaagttcgtccaagcaaaacgaagaagaggcatagttg 28139621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 459
Target Start/End: Complemental strand, 28181442 - 28181189
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  28181442 tggtggccagagaagttagcagtttgagtaagagcaatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 28181343  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtg 405  Q
    | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  |||||||||  ||||||||  | || |   ||  |||  |||||||    
T  28181342 ccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagtg 28181243  T
Q  406 aatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  28181242 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28181189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 27531154 - 27531303
Alignment:
Q  304 agctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcag 403  Q
    ||||| |||||| ||||| |||||| | ||||||||||||| || ||||||||| |||   ||||| ||||||||  | | || |||||| |   ||||     
T  27531154 agctaatgcttcaccatatctacctgtgtgatgtcgcacatcagtaggatccacaccaataaaaacaggcaaaacaagacaaccctttgtatcgtagcaa 27531253  T
Q  404 tgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    ||| |||| || ||||||||||||||||||||||||||||| ||||||||    
T  27531254 tgagtgatgtgaacaagttcgtccaaacaaaatgaagaagatgcatagtt 27531303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 281 - 453
Target Start/End: Original strand, 28098303 - 28098475
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||||||||||||||||||  |||||| |||||| |||||||| ||  | ||||||||||| |||||||| |||||| || | ||||  || ||||||     
T  28098303 ttttggaacctctcttcatgcttagctaatgcttcaccataactccccgtctgatgtcgcacgtgagaaggttccacgtcacaaaaaataggaaaaacga 28098402  T
Q  381 ggcgactctttgtcttc-cagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
     || || |||| |||||  | | ||||||||| ||||||||||| |||||||||||  ||||||| ||||||||    
T  28098403 agcaacccttt-tcttcgtaacggtgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagtt 28098475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 26937293 - 26937169
Alignment:
Q  335 tgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaa 434  Q
    ||||| || ||||||||||||||  |||||||||  |||||||   |  |||  ||||||||  |||||| || ||| ||||||||||||||||||||||    
T  26937293 tgtcgaacgtgagaaggatccacttcatagaaaataggcaaaattagatgaccttttgtcttgaagcagtcaacgatgtggacaagttcgtccaaacaaa 26937194  T
Q  435 atgaagaagaggcatagttggtaga 459  Q
    ||||||||| |||||||||| ||||    
T  26937193 atgaagaagtggcatagttgataga 26937169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 454
Target Start/End: Original strand, 26341920 - 26342041
Alignment:
Q  336 gtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgac---tctttgtcttccagcagtgaatgatttggacaagttcgtccaaaca 432  Q
    |||| ||||||||||| |||| | |||||||||| |||||||    |||||   |||||| |||  |||| |||||||| ||||||||||||||||||||    
T  26341920 gtcgtacatgagaaggttccatgtcatagaaaacaggcaaaattttgcgacccttctttgccttgaagcaatgaatgatgtggacaagttcgtccaaaca 26342019  T
Q  433 aaatgaagaagaggcatagttg 454  Q
    ||| |||||||| |||||||||    
T  26342020 aaacgaagaagaagcatagttg 26342041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 28185695 - 28185441
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || |||||||||  ||||||| || ||||||||| ||| |  |||   |    
T  28185695 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgctatccttgttattttggaacttctttatatgatca 28185596  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  |||||||||  ||||||||  | || |   ||  |||  ||||||    
T  28185595 tccagtgctttaccataactgcccgtgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagt 28185496  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
     |||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  28185495 taatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28185441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 2185069 - 2184980
Alignment:
Q  363 agaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagt 452  Q
    ||||||| |||| ||| ||||| | ||||| |||  ||||  ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2185069 agaaaactggcagaaccgggcgtccctttgacttggagcaacgaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 2184417 - 2184369
Alignment:
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  2184417 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagtt 2184369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 26975182 - 26975134
Alignment:
Q  404 tgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagt 452  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  26975182 tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 28150072 - 28150012
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||||||| || |||||||||||||||||||||||||||||||| | ||||||| ||||    
T  28150072 agcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgataga 28150012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 25071812 - 25071741
Alignment:
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagt 452  Q
    |||||||||||  |||  || |||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  25071812 ggcgactcttttccttgaagtagtgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 26623712 - 26623636
Alignment:
Q  112 tttcccttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtag 188  Q
    |||||| ||||||| || | || |||||||| ||||||| ||| | ||||||||||||||||||| |||||||||||    
T  26623712 tttcccatttaagctttaagattgaatgatttaggaatataaaataaagaaggcaaaacaagattcaagtgaagtag 26623636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 26729689 - 26729613
Alignment:
Q  112 tttcccttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtag 188  Q
    |||||| ||||||| || | || |||||||| ||||||| ||| | ||||||||||||||||||| |||||||||||    
T  26729689 tttcccatttaagctttaagattgaatgatttaggaatataaaataaagaaggcaaaacaagattcaagtgaagtag 26729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 27229347 - 27229303
Alignment:
Q  419 agttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||    
T  27229347 agttcgttcaaacaaaatgaagaagatgcatagttggcagaaaat 27229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 29826229 - 29826182
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacg 379  Q
    ||||||||||||||||||||||||||  |||||||||  |||||||||    
T  29826229 tgatgtcgcacatgagaaggatccacatcatagaaaataggcaaaacg 29826182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 27665169 - 27665223
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagtt 453  Q
    |||| |||||||| ||||||||||| || ||||||||||||||||  ||||||||    
T  27665169 agcaatgaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagtt 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 28098215 - 28098273
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctct 263  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||||| || | ||||||||    
T  28098215 atggtggccggacaagttagctgcttggttaagagccatcttccatttatgcagcctct 28098273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 26937435 - 26937391
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttcca 249  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||    
T  26937435 atggtggccagacaagtttgccgcttggttaagagctatcttcca 26937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 28325616 - 28325556
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||||||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||    
T  28325616 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgataga 28325556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 162 - 463
Target Start/End: Original strand, 28127481 - 28127782
Alignment:
Q  162 aggcaaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcct 261  Q
    ||||||||||||||| ||||  |||||| ||||| |||  |  ||||| ||| ||||||||||| |||||||| |||||||||||||| |  | ||  |     
T  28127481 aggcaaaacaagatttaagtatagtagggtaccctggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcg 28127580  T
Q  262 ctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgcca 361  Q
    |||||| || | ||| || ||||||||||||||| ||||  |||| ||  |||| |||||||| ||| |||||| |||||||| || |||||||||||||    
T  28127581 ctccatgtttttcttgttattttggaacctctctccatgcttagcaagctcttcaccataactccctgtatgatatcgcacatcagtaggatccacgcca 28127680  T
Q  362 tagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaa 461  Q
     ||||||| ||||||||  |||||| |||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  28127681 aagaaaacaggcaaaactaggcgaccctttgtcttgtagcagtgaatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaa 28127780  T
Q  462 at 463  Q
    ||    
T  28127781 at 28127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 205 - 459
Target Start/End: Original strand, 28164208 - 28164461
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| |||||||||||||| |  | ||  | |||||| || | ||| || ||||||||||||||  ||||  ||    
T  28164208 atggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctcaccatgctta 28164307  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    |  ||  |||  |||||||| ||| ||||||||||||||| || ||||||||||||| ||||||| ||||||||  |||||| |||||||||  ||||||    
T  28164308 gtaagatctttgccataactccctgtatgatgtcgcacatcagtaggatccacgcca-agaaaacaggcaaaactaggcgaccctttgtcttgtagcagt 28164406  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  28164407 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 28164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 268314 - 268459
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| |||||||||||||||||| |||||||||| | | |||| |||| ||||  ||||||||||||| ||||    
T  268314 ccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacgggcaaaatgagacgaccctttttcttgtagcagtgaatgatgtgga 268413  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  268414 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 268459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 205 - 451
Target Start/End: Original strand, 4529 - 4775
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||| ||| |  ||||| ||||||| ||||||   |    
T  4529 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctca 4628  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| |||||||||||| |  |||||||||| | || ||| ||||||||  ||||||| ||||||||| |||||| |||||||||  ||||||    
T  4629 gccaatgcttcaccataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 4728  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatag 451  Q
    |||| || ||||||||||||||||||||||| |||||| ||||||||    
T  4729 gaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatag 4775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 462
Target Start/End: Original strand, 13490 - 13747
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | ||  | |||||| |||| ||| |  ||||| ||||||| |||||||  |    
T  13490 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 13589  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || ||||||||| ||| ||||||| ||||||||| ||||||  ||||||||  |||| |    
T  13590 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 13689  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||| || || |||||||||||||| ||||||   |||| ||| |||||| |||||||    
T  13690 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaa 13747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 29273740 - 29273885
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| |||||||||||||||||| || ||||||| | | |||| |||||||||  ||||||||||||| ||||    
T  29273740 ccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtgaatgatgtgga 29273839  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  29273840 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 29273885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 4e-36; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 18679524 - 18679669
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    ||||||||||| || |||||||  |  |||| |||||||||| |||||||||| ||||||||  | |||| |||||||||  ||||||||||||| ||||    
T  18679524 ccataactaccactttgatgtcatatgtgagtaggatccacgacatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgaatgatgtgga 18679623  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  18679624 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 18679669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 344 - 462
Target Start/End: Original strand, 18655461 - 18655579
Alignment:
Q  344 tgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaag 443  Q
    |||| ||||||||||||||||||||| || |||||| | |||| |||||||||  |||||||||||||  ||||||||||||||||||||||||||||||    
T  18655461 tgagtaggatccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtgaatgatgcggacaagttcgtccaaacaaaatgaagaag 18655560  T
Q  444 aggcatagttggtagaaaa 462  Q
    ||||||||||| |||||||    
T  18655561 aggcatagttgatagaaaa 18655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 317 - 462
Target Start/End: Original strand, 18699357 - 18699502
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    |||||||| || || |||||||| |  |||| |||||| |||||||||||||| ||||||||| | ||||  ||||||||  ||||||||||||| || |    
T  18699357 ccataactcccactttgatgtcgtatgtgagtaggatctacgccatagaaaacaggcaaaacgagacgaccttttgtcttgtagcagtgaatgatgtgaa 18699456  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  18699457 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 18699502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 462
Target Start/End: Original strand, 18731493 - 18731606
Alignment:
Q  349 aggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggca 448  Q
    ||||||||||||||||||||| ||||||||  | |||| |||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18731493 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgtccaaacaaaatgaagaagaggca 18731592  T
Q  449 tagttggtagaaaa 462  Q
    |||||| |||||||    
T  18731593 tagttgatagaaaa 18731606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 462
Target Start/End: Original strand, 18724074 - 18724187
Alignment:
Q  349 aggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggca 448  Q
    ||||||||||||||||||||| ||||||||  | |||| |||||||||  ||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  18724074 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgttcaaacaaaatgaagaagaggca 18724173  T
Q  449 tagttggtagaaaa 462  Q
    |||||| |||||||    
T  18724174 tagttgatagaaaa 18724187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 18073979 - 18073833
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||| ||||||| ||||||||| ||| || ||| || ||  ||||||||||||| ||||    
T  18073979 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 18073880  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||  |||||||||| |||||||||| |||||||||| |||||||    
T  18073879 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaat 18073833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 5090915 - 5091059
Alignment:
Q  308 agtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaa 407  Q
    |||||||| |||||||| ||  | |||| ||||||||||||||| ||||| ||||||||||  ||||||||  ||| ||  |||  |||  |||||||||    
T  5090915 agtgcttcaccataacttccagtctgatatcgcacatgagaaggttccacaccatagaaaataggcaaaaccaggcaaccattttccttggagcagtgaa 5091014  T
Q  408 tgatttggacaagttcgtccaaacaaaatgaagaagaggcatagt 452  Q
    | || ||||||||||| || |||||||| |||||||| |||||||    
T  5091015 taatatggacaagttcatctaaacaaaacgaagaagaagcatagt 5091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 17989092 - 17989156
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    ||||||||||||| |||||||||  |||||||||| |||||||||| |||||||||| |||||||    
T  17989092 agcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaat 17989156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 451
Target Start/End: Original strand, 3355 - 3525
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| ||||| ||| | ||||| |||| ||||     
T  3355 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttccacaccaaataaaacaggcagaacga 3454  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatag 451  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3455 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatag 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 14290 - 14470
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacgg 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||||  ||||||| |||||||||     
T  14290 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacga 14389  T
Q  381 ggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  14390 ggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaa 14470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 59787 - 59641
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||| ||||||| ||||||||| ||| || ||| || ||  ||||||||||||| ||||    
T  59787 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 59688  T
Q  417 caagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaat 463  Q
    |||||  |||||||||| |||||||||| |||||||||| |||||||    
T  59687 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaat 59641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 462
Target Start/End: Complemental strand, 7854 - 7597
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | ||  | |||||| |||| ||| |  ||||| ||||||| |||||||  |    
T  7854 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 7755  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || ||||||||| ||| ||||||| ||||||||| ||||||  | ||||||  |||| |    
T  7754 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttctgtcttgtagcaat 7655  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaa 462  Q
    |||| || || |||||||||||||| ||||||   |||| ||| |||||| |||||||    
T  7654 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaa 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 58; Significance: 3e-24; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 459
Target Start/End: Complemental strand, 27776 - 27523
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  27776 tggtggccagagaagttagcagtttgagtaagagcaatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 27677  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtg 405  Q
    | |||||||  |||||||| ||  | |||||||||||||||||||| |||||  |||||||||  ||||||||  |||| |  |||  |||  |||| ||    
T  27676 ccagtgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatg 27577  T
Q  406 aatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  27576 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 27523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 35054 - 34800
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| ||||||| || ||| |||||||| |||||||| || | || ||||||||| |||||||| || ||||||||| ||| |  |||   |    
T  35054 atggtggccagaaaagttagatgtttgagtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatca 34955  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  |||||||||  ||||||||  | || |   ||  |||  ||||||    
T  34954 tccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagt 34855  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  34854 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 34800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 459
Target Start/End: Complemental strand, 43295 - 43041
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||||| ||| || |||||  ||||||| || | || ||||||||| |||||| |  | ||||||||| ||||   |||   |    
T  43295 atggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgctattttggaacttctcaatatgctca 43196  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || |||||||  |||||||| ||  | ||||||| ||| | |||||| |||||  |||||||||  ||||||||  |||| |  ||| |||| |||||||    
T  43195 gccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagt 43096  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  43095 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 43041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 116931 - 116871
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||||||||| || ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||    
T  116931 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgataga 116871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 58267 - 58394
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagtgaatgatttggacaagttcgtccaaac 431  Q
    ||||||||||| |||||||| |||||| |||||||||  ||||||||  |||| |  | |  ||   ||||||||||||| ||||||||||||| ||| |    
T  58267 tgatgtcgcacgtgagaaggttccacgtcatagaaaattggcaaaactaggcgcccatattcctcgaagcagtgaatgatgtggacaagttcgttcaagc 58366  T
Q  432 aaaatgaagaagaggcatagttggtaga 459  Q
    ||||||||||||| ||||||||| ||||    
T  58367 aaaatgaagaagaagcatagttgataga 58394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 205 - 452
Target Start/End: Original strand, 17993542 - 17993789
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| |||||| |||||||| ||||||| ||   || || |||||| || |||||  | ||||| || | |||||||||  ||    
T  17993542 atggtggccagataagttagcagcttggttaagagctttcttccatttcaacaaccgctccatgttttccttgctattttgaaaaccctcttcatgctta 17993641  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaacggggcgactctttgtcttccagcagt 404  Q
    || |||||||| ||||||||| |  | ||||||||||| |||||||| ||   |||||||||||| || |  || |    || ||||   ||  |||| |    
T  17993642 gcaagtgcttcaccataactatcattctgatgtcgcacctgagaaggttctgtgccatagaaaacaggaattaccgtcgtacccttttcattggagcatt 17993741  T
Q  405 gaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagt 452  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  17993742 gaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 3279823 - 3279763
Alignment:
Q  399 agcagtgaatgatttggacaagttcgtccaaacaaaatgaagaagaggcatagttggtaga 459  Q
    |||| |||||||| ||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  3279823 agcaatgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgataga 3279763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 3280032 - 3279988
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttcca 249  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||||||    
T  3280032 atggtggccggacaagttagctgcttggttaagagccatcttcca 3279988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 16689234 - 16689167
Alignment:
Q  311 gcttctccataactacctctatgatgtcgcacatgagaaggatccacgccatagaaaacgggcaaaac 378  Q
    ||||| |||||||| ||  | ||||||| |||||| |||||||||||| |||||||||| ||||||||    
T  16689234 gcttcaccataacttccaatctgatgtctcacatgcgaaggatccacgtcatagaaaacaggcaaaac 16689167  T

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