View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18949_low_10 (Length: 336)
Name: NF18949_low_10
Description: NF18949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18949_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 91 - 299
Target Start/End: Original strand, 42882341 - 42882549
Alignment:
| Q |
91 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
190 |
Q |
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| T |
42882341 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
42882440 |
T |
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| Q |
191 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacattacattacat |
290 |
Q |
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| T |
42882441 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacgttacattacat |
42882540 |
T |
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| Q |
291 |
gatatttaa |
299 |
Q |
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| T |
42882541 |
gatatttaa |
42882549 |
T |
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