View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18949_low_7 (Length: 403)

Name: NF18949_low_7
Description: NF18949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18949_low_7
NF18949_low_7
[»] chr4 (74 HSPs)
chr4 (8-354)||(40412080-40412442)
chr4 (1-114)||(54231669-54231782)
chr4 (3-114)||(52061690-52061801)
chr4 (3-113)||(53125240-53125350)
chr4 (1-114)||(354096-354209)
chr4 (1-114)||(19093154-19093267)
chr4 (1-114)||(31984153-31984266)
chr4 (5-114)||(35231824-35231933)
chr4 (1-118)||(39671455-39671572)
chr4 (3-114)||(42645393-42645504)
chr4 (8-114)||(31861987-31862093)
chr4 (4-114)||(53599787-53599897)
chr4 (1-114)||(8735519-8735632)
chr4 (5-114)||(22828402-22828511)
chr4 (1-114)||(29295484-29295597)
chr4 (5-114)||(34464411-34464520)
chr4 (1-114)||(44069161-44069274)
chr4 (3-111)||(16664373-16664481)
chr4 (5-113)||(18781613-18781721)
chr4 (3-114)||(12252224-12252335)
chr4 (3-114)||(42099840-42099951)
chr4 (3-114)||(48782331-48782442)
chr4 (1-114)||(13629194-13629307)
chr4 (1-114)||(16464783-16464896)
chr4 (1-114)||(26906390-26906503)
chr4 (1-114)||(35232299-35232412)
chr4 (1-114)||(44013914-44014027)
chr4 (1-114)||(44217836-44217949)
chr4 (3-115)||(47884987-47885100)
chr4 (21-113)||(36659429-36659521)
chr4 (5-111)||(46872055-46872161)
chr4 (4-114)||(56576105-56576215)
chr4 (1-106)||(21044756-21044861)
chr4 (1-114)||(22678310-22678423)
chr4 (1-114)||(38542277-38542390)
chr4 (4-114)||(42513026-42513137)
chr4 (3-114)||(55703052-55703163)
chr4 (1-75)||(33084608-33084682)
chr4 (1-114)||(38617310-38617421)
chr4 (1-114)||(47428659-47428762)
chr4 (1-114)||(5374351-5374464)
chr4 (1-114)||(6195154-6195267)
chr4 (1-114)||(33755032-33755145)
chr4 (5-110)||(37502156-37502261)
chr4 (1-114)||(47251543-47251656)
chr4 (1-80)||(55147096-55147175)
chr4 (5-114)||(19527221-19527330)
chr4 (1-114)||(23237760-23237873)
chr4 (1-114)||(36408853-36408966)
chr4 (1-114)||(36423019-36423132)
chr4 (1-114)||(44549773-44549886)
chr4 (1-114)||(47751660-47751773)
chr4 (9-114)||(50623551-50623656)
chr4 (1-114)||(35381420-35381529)
chr4 (1-68)||(8741671-8741738)
chr4 (1-114)||(26620352-26620465)
chr4 (8-75)||(47093949-47094016)
chr4 (3-114)||(52257792-52257903)
chr4 (3-114)||(55935239-55935350)
chr4 (5-114)||(3436068-3436177)
chr4 (5-58)||(4201375-4201428)
chr4 (5-114)||(23719785-23719894)
chr4 (1-114)||(39683715-39683828)
chr4 (5-114)||(42629451-42629560)
chr4 (3-102)||(6091366-6091465)
chr4 (5-56)||(23621911-23621962)
chr4 (45-114)||(33809261-33809330)
chr4 (5-114)||(47596614-47596723)
chr4 (348-388)||(40412894-40412934)
chr4 (67-114)||(49089102-49089149)
chr4 (5-56)||(32239533-32239581)
chr4 (45-114)||(42133211-42133280)
chr4 (61-114)||(43888171-43888224)
chr4 (1-38)||(52677222-52677259)
[»] chr5 (76 HSPs)
chr5 (1-114)||(28446982-28447095)
chr5 (1-114)||(4017523-4017636)
chr5 (1-114)||(7403961-7404074)
chr5 (1-114)||(14793787-14793900)
chr5 (1-114)||(40198897-40199010)
chr5 (4-114)||(26854092-26854202)
chr5 (4-114)||(38910385-38910495)
chr5 (1-114)||(8229801-8229913)
chr5 (5-114)||(12869896-12870005)
chr5 (1-114)||(42911659-42911772)
chr5 (3-114)||(2673975-2674086)
chr5 (3-114)||(24074835-24074946)
chr5 (1-114)||(4098440-4098553)
chr5 (1-94)||(6072561-6072654)
chr5 (1-114)||(28024256-28024369)
chr5 (1-114)||(39073153-39073266)
chr5 (3-114)||(4985172-4985283)
chr5 (3-114)||(6754176-6754287)
chr5 (3-114)||(36239569-36239680)
chr5 (4-114)||(38017274-38017384)
chr5 (1-114)||(5119287-5119400)
chr5 (1-114)||(8825166-8825279)
chr5 (1-114)||(38363298-38363411)
chr5 (3-114)||(9127348-9127459)
chr5 (1-114)||(4427402-4427516)
chr5 (1-114)||(4962185-4962296)
chr5 (1-114)||(9076180-9076293)
chr5 (1-114)||(16124257-16124370)
chr5 (6-110)||(31546000-31546104)
chr5 (1-114)||(7579664-7579778)
chr5 (1-114)||(1087930-1088043)
chr5 (1-102)||(2133916-2134016)
chr5 (1-114)||(4175477-4175590)
chr5 (1-114)||(6689708-6689821)
chr5 (5-114)||(10359232-10359341)
chr5 (1-114)||(18020765-18020878)
chr5 (1-114)||(18437320-18437433)
chr5 (1-114)||(25344069-25344182)
chr5 (1-80)||(4694873-4694952)
chr5 (39-114)||(7834062-7834137)
chr5 (3-114)||(18794894-18795005)
chr5 (3-114)||(38702252-38702363)
chr5 (1-114)||(1297734-1297848)
chr5 (1-114)||(12664967-12665080)
chr5 (1-106)||(22582581-22582686)
chr5 (5-114)||(25027572-25027681)
chr5 (1-114)||(34261421-34261534)
chr5 (1-93)||(19831560-19831652)
chr5 (3-114)||(42393745-42393856)
chr5 (1-114)||(7408440-7408553)
chr5 (45-114)||(13703250-13703319)
chr5 (5-114)||(37809872-37809981)
chr5 (5-114)||(39893806-39893915)
chr5 (2-114)||(30368132-30368244)
chr5 (39-114)||(38297522-38297597)
chr5 (5-115)||(32389099-32389209)
chr5 (3-104)||(1795124-1795225)
chr5 (5-114)||(3892925-3893033)
chr5 (5-114)||(7466295-7466404)
chr5 (5-114)||(31803437-31803546)
chr5 (1-114)||(37303104-37303217)
chr5 (5-114)||(37633789-37633898)
chr5 (3-103)||(28463393-28463493)
chr5 (3-102)||(5144007-5144106)
chr5 (3-114)||(26906601-26906712)
chr5 (1-114)||(3243905-3244018)
chr5 (5-114)||(12784440-12784548)
chr5 (21-114)||(38502801-38502894)
chr5 (7-75)||(18465812-18465880)
chr5 (3-107)||(38297620-38297724)
chr5 (3-107)||(38308130-38308234)
chr5 (1-44)||(4688865-4688908)
chr5 (3-114)||(24229059-24229170)
chr5 (45-114)||(6008037-6008107)
chr5 (5-114)||(12722956-12723065)
chr5 (5-114)||(37306696-37306805)
[»] chr7 (43 HSPs)
chr7 (1-114)||(3837989-3838102)
chr7 (3-114)||(36298177-36298288)
chr7 (1-114)||(33099838-33099951)
chr7 (1-112)||(7312744-7312855)
chr7 (1-114)||(38168791-38168905)
chr7 (1-114)||(7477201-7477314)
chr7 (1-114)||(8381953-8382066)
chr7 (1-114)||(10227383-10227496)
chr7 (1-114)||(32966052-32966165)
chr7 (5-114)||(41891401-41891510)
chr7 (3-114)||(26724053-26724165)
chr7 (1-114)||(5732076-5732189)
chr7 (1-114)||(31430686-31430799)
chr7 (1-114)||(33921777-33921890)
chr7 (1-114)||(12838081-12838194)
chr7 (1-114)||(36922366-36922480)
chr7 (1-114)||(32528331-32528444)
chr7 (5-114)||(35746648-35746757)
chr7 (5-114)||(47408244-47408353)
chr7 (1-101)||(44480158-44480258)
chr7 (1-59)||(26632238-26632296)
chr7 (1-114)||(18470434-18470547)
chr7 (1-114)||(33258008-33258121)
chr7 (8-109)||(37353878-37353979)
chr7 (5-114)||(41675190-41675298)
chr7 (3-68)||(45324153-45324218)
chr7 (1-68)||(17896572-17896639)
chr7 (3-114)||(29497537-29497648)
chr7 (1-112)||(36648011-36648121)
chr7 (5-114)||(42841869-42841978)
chr7 (1-114)||(8265076-8265189)
chr7 (1-114)||(22950821-22950934)
chr7 (5-114)||(28608725-28608834)
chr7 (3-112)||(29722310-29722418)
chr7 (1-114)||(33173934-33174047)
chr7 (5-114)||(34368663-34368771)
chr7 (1-114)||(35112556-35112669)
chr7 (1-80)||(20035175-20035254)
chr7 (1-80)||(20045586-20045665)
chr7 (5-114)||(31815072-31815180)
chr7 (5-113)||(41409872-41409980)
chr7 (5-114)||(24283711-24283819)
chr7 (45-114)||(41408795-41408864)
[»] chr6 (44 HSPs)
chr6 (1-114)||(17123986-17124099)
chr6 (2-114)||(1751432-1751544)
chr6 (3-114)||(22050177-22050288)
chr6 (1-119)||(7056136-7056254)
chr6 (1-114)||(8992675-8992789)
chr6 (1-114)||(9017122-9017236)
chr6 (1-114)||(3621717-3621830)
chr6 (1-114)||(24663506-24663619)
chr6 (1-114)||(26470724-26470837)
chr6 (8-114)||(8176567-8176673)
chr6 (5-114)||(364543-364652)
chr6 (1-106)||(7632046-7632151)
chr6 (1-114)||(3850447-3850560)
chr6 (1-114)||(9838123-9838236)
chr6 (5-114)||(17836024-17836133)
chr6 (5-80)||(30416110-30416185)
chr6 (1-114)||(373850-373963)
chr6 (1-114)||(1923979-1924092)
chr6 (5-114)||(12732306-12732415)
chr6 (1-114)||(17193285-17193398)
chr6 (5-114)||(23777427-23777536)
chr6 (1-114)||(23923714-23923827)
chr6 (5-114)||(26485686-26485795)
chr6 (5-114)||(11128962-11129071)
chr6 (5-114)||(11676616-11676725)
chr6 (1-114)||(32359441-32359554)
chr6 (3-114)||(1252295-1252406)
chr6 (1-80)||(27313630-27313709)
chr6 (24-114)||(1249689-1249779)
chr6 (5-114)||(31244750-31244859)
chr6 (5-114)||(19645723-19645834)
chr6 (6-114)||(22784669-22784777)
chr6 (3-114)||(24635837-24635948)
chr6 (3-54)||(30388850-30388901)
chr6 (5-114)||(17251256-17251366)
chr6 (21-114)||(24949254-24949347)
chr6 (3-114)||(11431158-11431269)
chr6 (3-114)||(34378988-34379099)
chr6 (3-45)||(52792-52834)
chr6 (1-75)||(7235567-7235641)
chr6 (42-114)||(53798-53871)
chr6 (37-114)||(17601134-17601211)
chr6 (5-114)||(24356055-24356164)
chr6 (42-114)||(30388934-30389006)
[»] chr1 (66 HSPs)
chr1 (1-114)||(51972278-51972391)
chr1 (1-114)||(29830880-29830993)
chr1 (1-114)||(30686538-30686651)
chr1 (4-114)||(49497282-49497392)
chr1 (1-114)||(38648584-38648697)
chr1 (3-114)||(2059809-2059920)
chr1 (1-114)||(1429411-1429524)
chr1 (1-114)||(1677325-1677438)
chr1 (1-114)||(35255613-35255726)
chr1 (1-114)||(35483778-35483891)
chr1 (1-114)||(43500633-43500746)
chr1 (1-114)||(45226574-45226687)
chr1 (1-114)||(12124771-12124884)
chr1 (1-114)||(13507897-13508010)
chr1 (1-114)||(13515085-13515198)
chr1 (1-114)||(13566806-13566919)
chr1 (1-114)||(13699301-13699414)
chr1 (1-114)||(19349376-19349489)
chr1 (1-114)||(19929463-19929576)
chr1 (1-114)||(32994466-32994579)
chr1 (1-114)||(37437050-37437163)
chr1 (3-114)||(8464254-8464365)
chr1 (4-114)||(35531292-35531402)
chr1 (1-114)||(1024683-1024796)
chr1 (1-114)||(10506938-10507051)
chr1 (1-114)||(10676029-10676142)
chr1 (1-114)||(20605621-20605734)
chr1 (1-114)||(45368215-45368328)
chr1 (1-114)||(50825570-50825682)
chr1 (1-114)||(37609301-37609411)
chr1 (4-114)||(12231068-12231178)
chr1 (5-99)||(21927708-21927802)
chr1 (3-101)||(52749144-52749242)
chr1 (5-114)||(9127800-9127909)
chr1 (1-114)||(28679148-28679261)
chr1 (1-114)||(35700372-35700485)
chr1 (1-114)||(39412508-39412621)
chr1 (8-114)||(7783084-7783190)
chr1 (5-114)||(4100906-4101015)
chr1 (5-114)||(51974168-51974277)
chr1 (3-114)||(38597720-38597831)
chr1 (16-114)||(40926750-40926848)
chr1 (1-114)||(30702287-30702400)
chr1 (1-114)||(48508260-48508373)
chr1 (5-114)||(32168309-32168418)
chr1 (1-114)||(31487776-31487889)
chr1 (9-114)||(31588737-31588842)
chr1 (5-114)||(35605729-35605838)
chr1 (6-114)||(43809036-43809144)
chr1 (8-56)||(43952922-43952970)
chr1 (1-113)||(46096673-46096785)
chr1 (3-114)||(1428534-1428645)
chr1 (3-114)||(9362102-9362213)
chr1 (24-119)||(15660737-15660832)
chr1 (1-56)||(44818581-44818636)
chr1 (43-114)||(52649726-52649797)
chr1 (1-114)||(49908176-49908292)
chr1 (5-114)||(51613542-51613651)
chr1 (1-114)||(18344453-18344566)
chr1 (1-114)||(32348105-32348217)
chr1 (1-56)||(18033880-18033936)
chr1 (50-114)||(36850813-36850877)
chr1 (54-114)||(48174670-48174730)
chr1 (45-114)||(5598216-5598285)
chr1 (45-114)||(33720688-33720757)
chr1 (9-114)||(44182894-44182998)
[»] chr8 (68 HSPs)
chr8 (3-114)||(8453236-8453347)
chr8 (3-114)||(15596473-15596584)
chr8 (1-114)||(14263671-14263784)
chr8 (3-114)||(1202444-1202555)
chr8 (3-114)||(43641989-43642100)
chr8 (8-114)||(1245446-1245552)
chr8 (5-114)||(18291594-18291703)
chr8 (1-114)||(26062834-26062947)
chr8 (1-114)||(38482792-38482905)
chr8 (1-114)||(10180497-10180610)
chr8 (1-114)||(33935060-33935173)
chr8 (1-114)||(35052180-35052293)
chr8 (1-119)||(34046978-34047096)
chr8 (3-109)||(39303521-39303627)
chr8 (5-114)||(11994012-11994121)
chr8 (1-114)||(12342614-12342727)
chr8 (1-114)||(23430036-23430149)
chr8 (1-114)||(34981956-34982069)
chr8 (1-114)||(36058359-36058472)
chr8 (5-114)||(2456115-2456224)
chr8 (1-114)||(9954776-9954889)
chr8 (1-114)||(18842656-18842769)
chr8 (1-114)||(32010084-32010197)
chr8 (1-114)||(33314671-33314784)
chr8 (1-114)||(38128547-38128660)
chr8 (5-114)||(40228426-40228535)
chr8 (4-114)||(45281378-45281488)
chr8 (9-114)||(8672629-8672734)
chr8 (5-114)||(14228322-14228431)
chr8 (1-114)||(21651746-21651859)
chr8 (5-114)||(25703578-25703687)
chr8 (5-114)||(25812749-25812858)
chr8 (3-114)||(41308024-41308136)
chr8 (3-114)||(16656829-16656940)
chr8 (3-114)||(23848556-23848667)
chr8 (5-114)||(14061149-14061258)
chr8 (5-114)||(14511430-14511539)
chr8 (1-77)||(3513484-3513560)
chr8 (1-81)||(9808007-9808087)
chr8 (3-59)||(15623666-15623722)
chr8 (3-59)||(15647454-15647510)
chr8 (14-114)||(17313282-17313382)
chr8 (3-94)||(7605919-7606010)
chr8 (1-95)||(12763561-12763655)
chr8 (1-114)||(4057415-4057528)
chr8 (5-114)||(12248770-12248879)
chr8 (25-114)||(13328121-13328210)
chr8 (1-114)||(27518713-27518826)
chr8 (3-106)||(9687522-9687625)
chr8 (1-114)||(17074582-17074695)
chr8 (1-114)||(17573575-17573688)
chr8 (5-114)||(26740137-26740246)
chr8 (1-114)||(39615453-39615565)
chr8 (5-114)||(43553170-43553279)
chr8 (3-114)||(7483871-7483982)
chr8 (3-114)||(35296173-35296284)
chr8 (3-41)||(11707558-11707596)
chr8 (1-114)||(2888468-2888581)
chr8 (29-114)||(11707454-11707539)
chr8 (1-114)||(23855684-23855797)
chr8 (5-94)||(40603871-40603960)
chr8 (5-114)||(23793271-23793384)
chr8 (34-114)||(31964729-31964809)
chr8 (5-80)||(17718634-17718709)
chr8 (67-114)||(29091085-29091132)
chr8 (3-108)||(6757535-6757640)
chr8 (5-114)||(35029677-35029786)
chr8 (3-107)||(38221941-38222045)
[»] chr2 (43 HSPs)
chr2 (3-114)||(44360562-44360673)
chr2 (1-114)||(478976-479089)
chr2 (1-114)||(19594477-19594590)
chr2 (1-114)||(36404844-36404957)
chr2 (1-114)||(14308520-14308633)
chr2 (1-114)||(15183004-15183117)
chr2 (1-114)||(15893583-15893696)
chr2 (1-114)||(26342707-26342820)
chr2 (1-114)||(34357305-34357418)
chr2 (1-110)||(38186059-38186168)
chr2 (1-114)||(14288558-14288669)
chr2 (1-119)||(37093577-37093694)
chr2 (1-114)||(3363711-3363824)
chr2 (1-114)||(10812326-10812439)
chr2 (1-114)||(11222319-11222432)
chr2 (1-114)||(13965734-13965847)
chr2 (5-114)||(14295760-14295869)
chr2 (1-114)||(4883730-4883843)
chr2 (1-114)||(36375700-36375813)
chr2 (5-114)||(30264605-30264714)
chr2 (1-114)||(34399329-34399442)
chr2 (1-110)||(41885752-41885861)
chr2 (1-114)||(28145574-28145688)
chr2 (1-114)||(3376280-3376393)
chr2 (1-114)||(4654846-4654959)
chr2 (1-110)||(25558193-25558302)
chr2 (1-111)||(10263884-10263993)
chr2 (1-114)||(9706914-9707027)
chr2 (1-114)||(11560050-11560163)
chr2 (1-114)||(13000914-13001027)
chr2 (1-82)||(36824518-36824599)
chr2 (4-56)||(15677352-15677404)
chr2 (1-114)||(14541458-14541571)
chr2 (7-108)||(34884547-34884648)
chr2 (9-114)||(35158354-35158459)
chr2 (5-114)||(13754086-13754195)
chr2 (5-114)||(32854785-32854892)
chr2 (5-114)||(9370105-9370214)
chr2 (3-114)||(31024943-31025054)
chr2 (24-114)||(34262825-34262915)
chr2 (5-114)||(43077423-43077532)
chr2 (22-114)||(1259632-1259724)
chr2 (34-114)||(14284244-14284323)
[»] chr3 (63 HSPs)
chr3 (8-114)||(25983669-25983774)
chr3 (1-114)||(29698117-29698231)
chr3 (1-114)||(19550373-19550486)
chr3 (5-114)||(29803779-29803888)
chr3 (1-114)||(45145255-45145368)
chr3 (3-114)||(32980769-32980880)
chr3 (4-114)||(53745288-53745398)
chr3 (1-114)||(33491145-33491258)
chr3 (1-114)||(34266446-34266559)
chr3 (1-114)||(35315259-35315372)
chr3 (1-114)||(39866855-39866968)
chr3 (1-114)||(47069863-47069976)
chr3 (3-94)||(40139860-40139951)
chr3 (3-114)||(54911308-54911418)
chr3 (1-114)||(17102881-17102994)
chr3 (5-114)||(24981421-24981530)
chr3 (1-114)||(43775396-43775509)
chr3 (1-114)||(45055314-45055427)
chr3 (1-108)||(3376316-3376423)
chr3 (4-106)||(790680-790782)
chr3 (4-114)||(52627244-52627354)
chr3 (1-114)||(28885805-28885917)
chr3 (1-114)||(29651795-29651908)
chr3 (5-114)||(43554520-43554629)
chr3 (1-114)||(52663569-52663682)
chr3 (1-114)||(54106390-54106503)
chr3 (1-114)||(54898092-54898205)
chr3 (1-112)||(51697571-51697683)
chr3 (3-114)||(42671896-42672007)
chr3 (1-114)||(27483794-27483907)
chr3 (5-114)||(27992371-27992480)
chr3 (5-114)||(46973554-46973663)
chr3 (1-114)||(41926805-41926920)
chr3 (1-114)||(45101364-45101477)
chr3 (1-114)||(48152112-48152225)
chr3 (4-114)||(36234497-36234604)
chr3 (3-114)||(11473531-11473642)
chr3 (5-114)||(3643202-3643311)
chr3 (5-114)||(6902409-6902518)
chr3 (5-114)||(41351200-41351309)
chr3 (1-114)||(43945506-43945619)
chr3 (5-114)||(47104161-47104270)
chr3 (1-69)||(44544078-44544146)
chr3 (1-101)||(51244751-51244851)
chr3 (1-114)||(49123650-49123762)
chr3 (5-114)||(51219099-51219211)
chr3 (5-114)||(13158445-13158554)
chr3 (1-114)||(29458209-29458322)
chr3 (1-114)||(40318934-40319047)
chr3 (1-56)||(7328582-7328637)
chr3 (1-56)||(45513679-45513734)
chr3 (3-114)||(50092074-50092185)
chr3 (58-112)||(31610094-31610148)
chr3 (1-54)||(13168144-13168197)
chr3 (5-114)||(20848730-20848839)
chr3 (1-114)||(33074284-33074397)
chr3 (1-114)||(41425756-41425869)
chr3 (3-114)||(40010670-40010781)
chr3 (1-56)||(42671477-42671532)
chr3 (1-75)||(55141521-55141595)
chr3 (5-114)||(24070-24179)
chr3 (61-114)||(7329011-7329064)
chr3 (3-107)||(27039619-27039723)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-114)||(8281-8394)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-113)||(77215-77327)
[»] scaffold0886 (1 HSPs)
scaffold0886 (3-114)||(4644-4754)
[»] scaffold0172 (1 HSPs)
scaffold0172 (5-114)||(26128-26237)
[»] scaffold0831 (1 HSPs)
scaffold0831 (8-114)||(2941-3049)
[»] scaffold0040 (1 HSPs)
scaffold0040 (3-111)||(69229-69336)
[»] scaffold1213 (1 HSPs)
scaffold1213 (1-80)||(2-81)
[»] scaffold0024 (1 HSPs)
scaffold0024 (7-114)||(49279-49386)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-114)||(195588-195698)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-114)||(419493-419606)
[»] scaffold0343 (1 HSPs)
scaffold0343 (8-114)||(7558-7664)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-114)||(148434-148543)
scaffold0002 (1-54)||(138791-138844)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-74)||(14762-14835)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-114)||(147128-147197)


Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 354
Target Start/End: Original strand, 40412080 - 40412442
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||||||||| |||||||||||| || ||||||||||| ||||||||||| ||||||||||| ||| ||||||||  |||||||| ||||||| ||||    
T  40412080 ttaaatgaataaggtcattatagtaaaaatataacttattacatcaaaaatagtaacaattattaattgtcttaatttatgtaaaatgtcaaaaaatgac 40412179  T
Q  108 aattaaatagg---------------ttacacca-gctgtaatagcattgagatttcactgagaacaagaaaaactaggaaacaaaattcatgagcccga 191  Q
    | |||||||||               |||||| | | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40412180 agttaaataggaacataggtagtattttacactaagttgtaatagcattaagatttcattgagaacaagaaaaactaggaaacaaaattcatgagcccga 40412279  T
Q  192 agctcttttccccgaaaacacgttgtcccatttgtaggaaaatttaaaatgtctcgaatggtgttctttttgtctgctttcacttctttgaaccccaaac 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40412280 agctcttttccccgaaaacacgttgtcccatttgtaggaaaatttaaaatgtctcgaatggtgttctttttgtctgctttcacttcttggaaccccaaac 40412379  T
Q  292 tgtccccaattctttcgtaaaaaacttcaattatcttactaagcactccctccattcttacta 354  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40412380 tgtcccttattctttcgtaaaaaacttcaattatcttactaagcactccttccattcttacta 40412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 54231669 - 54231782
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||| ||| ||||||||| |||||    
T  54231669 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttgatttgtgtaaaatgtcaaa 54231768  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  54231769 aaatgacaattaaa 54231782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 52061690 - 52061801
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||||||| |||| ||| ||||||||| ||||||     
T  52061690 agatattaaatgaataaagtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatgattgattgtcttgatttgtgtaaaatgtcaaaat 52061789  T
Q  103 gtgacaattaaa 114  Q
     |||||||||||    
T  52061790 atgacaattaaa 52061801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 53125350 - 53125240
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||  || ||||||||| ||||||     
T  53125350 agatattaaatgaataaggtcattatagtaaaagtataacttattgcataaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaat 53125251  T
Q  103 gtgacaattaa 113  Q
     ||||||||||    
T  53125250 atgacaattaa 53125240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 354096 - 354209
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||| ||||| ||||||  ||  |||||||| |||||    
T  354096 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaaatagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 354195  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  354196 atgtgacaattaaa 354209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19093267 - 19093154
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||||||||| ||||||  ||  |||||||| |||||    
T  19093267 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaattattgactatcttggtttatgtaaaatgtcaaa 19093168  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  19093167 atgtgacaattaaa 19093154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31984266 - 31984153
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||| || ||||||||||||||| | ||  || ||||||||| |||||    
T  31984266 tgagatgttaaatgaataaggtcattacagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtgttggtttgtgtaaaatgtcaaa 31984167  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  31984166 aagtgacaattaaa 31984153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 35231824 - 35231933
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||| || || ||||| |||||| |||||||| ||||||||| |||||| ||    
T  35231824 atattaaatgaataaagtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgt 35231923  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  35231924 gacaattaaa 35231933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39671455 - 39671572
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| ||| |    
T  39671455 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcata 39671554  T
Q  101 aagtgacaattaaatagg 118  Q
    | ||||||||||||||||    
T  39671555 atgtgacaattaaatagg 39671572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 42645393 - 42645504
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||  ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |   |||||||| ||||||     
T  42645393 agatattaaatgaataagatcattatggtaaaagtataacttattgcatcaaaagtaataacaattattgattatcttagtatatgtaaaatgtcaaaat 42645492  T
Q  103 gtgacaattaaa 114  Q
    |||| |||||||    
T  42645493 gtgataattaaa 42645504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 31862093 - 31861987
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||||||||| |||||||||||| |||||||| || ||||||||||| || ||||||||||||||||||||| || ||||||||| ||||||| | ||    
T  31862093 ttaaatgaataaggtcattatagtaaaagtataattttttgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatttcaaaaaataac 31861994  T
Q  108 aattaaa 114  Q
    |||||||    
T  31861993 aattaaa 31861987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 53599897 - 53599787
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| | |||| |    
T  53599897 gatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgttaaaatg 53599798  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  53599797 tgacaattaaa 53599787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8735519 - 8735632
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  8735519 tgagatattaaatgaataagatcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 8735618  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  8735619 atgtgacaattaaa 8735632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 22828511 - 22828402
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||||||| || ||||  || ||||||||| |||||| ||    
T  22828511 atattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtagcaattattggttgtcttggtttgtgtaaaatgtcaaaatgt 22828412  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  22828411 gacaattaaa 22828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29295484 - 29295597
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||| ||| || || |||||||||||| ||||  || |||||||||||||||    
T  29295484 tgagatattaaatgaataaggtcattatattaaaagtataacttattgcatcgaaagtagtatcaattattgattgtcttggtttgtgtaaaatatcaaa 29295583  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  29295584 atgtgataattaaa 29295597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 34464411 - 34464520
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| ||||||||| || ||||||| ||||||||||||||| ||||| |||||||||||| | |||||| || ||||||||||||| ||    
T  34464411 atattaaatgaataaggtcattatattaaaagtatagcttattgcatcaaaagtaatatcaattattgattgttttaatttgtataaaatatcaaaatgt 34464510  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  34464511 aacaattaaa 34464520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44069161 - 44069274
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  44069161 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 44069260  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  44069261 atgtgacaattaaa 44069274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 16664373 - 16664481
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| |||| ||| ||||||||| ||||||     
T  16664373 agatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaat 16664472  T
Q  103 gtgacaatt 111  Q
    |||||||||    
T  16664473 gtgacaatt 16664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 18781613 - 18781721
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||| ||||||| || |||||| || ||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||||| || |||| |    
T  18781613 atattaattgaataaggtaattataataaaagtatatcttattgcatcaaaagtaataataattattgattatcttaatttgtgtaaaatgtcgaaaaat 18781712  T
Q  105 gacaattaa 113  Q
    |||||||||    
T  18781713 gacaattaa 18781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 12252224 - 12252335
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||| |||||| |||| |||  |||||||| ||||||     
T  12252224 agatattaaatgaataaagtcattatagtaaaagtataacttattgcatcaaaagtattatcaattgttgattgtcttgatttatgtaaaatgtcaaaat 12252323  T
Q  103 gtgacaattaaa 114  Q
     ||||| |||||    
T  12252324 atgacagttaaa 12252335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 42099840 - 42099951
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||  || ||||  ||| ||||||     
T  42099840 agatattaaatgaataaggtcattacagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtttaatgtcaaaat 42099939  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  42099940 gtgacaattaaa 42099951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 48782331 - 48782442
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||||||| || || ||||| |||||||||||  || ||||||||| ||||||     
T  48782331 agatattaaatgaataaggtcattatagtaaaagtattgcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaat 48782430  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  48782431 gtgacaattaaa 48782442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 13629307 - 13629194
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| ||||||| |||||||||| ||||||| || ||||| |||||| ||||  || ||||||||| |||||    
T  13629307 tgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 13629208  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  13629207 atgtgacaattaaa 13629194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16464896 - 16464783
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| |||   || ||||||||| |||||    
T  16464896 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtctaggtttgtgtaaaatgtcaaa 16464797  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||| ||||    
T  16464796 atgtgacaactaaa 16464783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26906503 - 26906390
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| ||||||| |||| |||||||||||||||||| |||| ||||| ||||| |||||| | ||| || |||||||||||||||    
T  26906503 tgagatattaaattaataaggtcattaaagtaaaagtataacttattgcataaaaagtaatatcaattgttgattgttttagtttgtgtaaaatatcaaa 26906404  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  26906403 atatgacaattaaa 26906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35232412 - 35232299
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||  | || ||||| |||||| ||||  || ||||||||| |||||    
T  35232412 tgagatattaaatgaataaggtcattatagtaaaagtatatcttattgcatcaaaagcagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 35232313  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  35232312 atgtgacaattaaa 35232299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44014027 - 44013914
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||| |  ||||| |||||| ||||  || ||||||||| |||||    
T  44014027 tgagatattaaataaataaggtcattatagtaaaagtatagcttattgcatcaaaaatagtttcaattgttgattgtcttggtttgtgtaaaatgtcaaa 44013928  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  44013927 atgtgacaattaaa 44013914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44217836 - 44217949
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  44217836 tgagatattaaatgaagaaggtcattatagtaaaagtatatcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 44217935  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  44217936 atgtgacaattaaa 44217949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 47885100 - 47884987
Alignment:
Q  3 agatattaaatgaa-taaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    |||||||||||||| ||| |||||||||||| ||||  ||||||||||||||||| |||||| ||||||||||| | ||  |||||||||||| ||||||    
T  47885100 agatattaaatgaaataaggtcattatagtaaaagtcaaacttattgcatcaaaagtaataataattattgattgttttggttcgtgtaaaatgtcaaaa 47885001  T
Q  102 agtgacaattaaat 115  Q
     |||||||||||||    
T  47885000 tgtgacaattaaat 47884987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 36659521 - 36659429
Alignment:
Q  21 gtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaa 113  Q
    |||||||||||| ||| |||||||||||||| |||||||| |||||||||||||| |||| ||| ||||||||| ||||||| ||||||||||    
T  36659521 gtcattatagtaaaagcataacttattgcattaaaaataaaaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaa 36659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 46872055 - 46872161
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||| ||    
T  46872055 atattaaatgaataaggtcattatagtaaaagaataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 46872154  T
Q  105 gacaatt 111  Q
    |||||||    
T  46872155 gacaatt 46872161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 56576215 - 56576105
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||  || || ||||| |||||||||||  || ||||||||  |||||| |    
T  56576215 gatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaggtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatg 56576116  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  56576115 tgacaattaaa 56576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21044861 - 21044756
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| ||||  || ||||||||| |||||    
T  21044861 tgagatattaaataaataaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 21044762  T
Q  101 aagtga 106  Q
    | ||||    
T  21044761 atgtga 21044756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22678423 - 22678310
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| | || || ||||| |||||||||||  ||  | |||||| |||||    
T  22678423 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaatagtagtatcaattgttgattatcttggtttatataaaatgtcaaa 22678324  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  22678323 atgtgacaattaaa 22678310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38542390 - 38542277
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||||||  ||||||||||| |||| |||||||||||||||||| || ||||||||||| ||| ||||  ||  |||||||| |||||    
T  38542390 tgagatgttaaatgaataagttcattatagtaaaagtctaacttattgcatcaaaagtagtaacaattattaattgtcttggtttatgtaaaatgtcaaa 38542291  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  38542290 aaatgacaattaaa 38542277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 42513137 - 42513026
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa- 102  Q
    |||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| || ||  |||| |||||| |||| ||| ||||||||| |||||||     
T  42513137 gatattaaatgaataaggtcatgatagtaaaagtatagcttattgcatcaaaagtagtattaattgttgattgtcttgatttgtgtaaaatttcaaaaat 42513038  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  42513037 gtgacaattaaa 42513026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 55703052 - 55703163
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||| ||||||||||| ||| |||||||| || |||||||||||||||||||| |||||||||||||||||| ||||  |   |||||||| ||||||     
T  55703052 agataataaatgaataaggtcgttatagtaaaaatataacttattgcatcaaaagtaataacaattattgattgtcttggtatatgtaaaatgtcaaaat 55703151  T
Q  103 gtgacaattaaa 114  Q
     |||||||||||    
T  55703152 atgacaattaaa 55703163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33084608 - 33084682
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatt 75  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  33084608 tgagatgttaaataaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgatt 33084682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38617421 - 38617310
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| || || ||||| |||||  | ||  || |||||||||||||||    
T  38617421 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgat--tgttggtttgtgtaaaatatcaaa 38617324  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  38617323 atgtgacaattaaa 38617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 47428659 - 47428762
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||          |||||||||| |||  ||||||||||||||    
T  47428659 tgagatattaaatgaataatgtcattatagtaaaagtattacttattgcatcaaaaataa----------tgattatcttgatttatgtaaaatatcaaa 47428748  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  47428749 atgtgacaattaaa 47428762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5374464 - 5374351
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| || |||| ||||||||||||||| || || ||||| |||||| |||| ||| || |||||| |||||    
T  5374464 tgagatattaaatgaataagatcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtataaaatgtcaaa 5374365  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  5374364 atatgacaattaaa 5374351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6195154 - 6195267
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| || || ||||| |||||| ||||||||||||||||||||||| || || ||||||| |||| ||||  || ||| ||||| |||||    
T  6195154 tgagatgttaaataaacaaggtcatcatagtaaaagtataacttattgcatcaaaagtagtagcaattatggattgtcttggtttgtgaaaaatgtcaaa 6195253  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  6195254 aagtgacaattaaa 6195267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33755145 - 33755032
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||  | || ||||| |||||| ||||| ||  |||||||| | |||    
T  33755145 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcattaaaaggagtatcaattgttgattgtcttagtttatgtaaaatgttaaa 33755046  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33755045 atgtgacaattaaa 33755032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 37502156 - 37502261
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||| |||||| ||||||| || ||||| ||||||||| ||||  || || |||||| |||||||||    
T  37502156 atattaaatgaataaggttattatagtaaaagtataaattattgtatcaaaagtagtaacatttattgattgtcttggtttgtataaaatgtcaaaaagt 37502255  T
Q  105 gacaat 110  Q
    ||||||    
T  37502256 gacaat 37502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 47251543 - 47251656
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||| || ||||||| ||||||||| ||  ||  ||||||||   |||    
T  47251543 tgagatattaaatgaataaggtcattataataaaagtacaacttattgcatcaaaagtagtaacaatcattgattattttggtttatgtaaaatgataaa 47251642  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  47251643 atgtgacaattaaa 47251656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 55147175 - 55147096
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||| |||||||||||| ||||||| |||| ||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  55147175 tgagatgttaaatgaataaggtcattacagtaaaagtatagcttattgcatcaaaagtaataacaattattaattgtctt 55147096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 19527330 - 19527221
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||| |||||||||| |||||||||||| || |||| ||||||| ||||||| || || ||||| |||||||||||  || ||||||||  |||||| ||    
T  19527330 atatgaaatgaataaggtcattatagtaaaattatagcttattgtatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgt 19527231  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  19527230 gacaattaaa 19527221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23237760 - 23237873
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| || || ||||| |||||| |  || || ||||||||| | |||    
T  23237760 tgagatattaaatgaataaggtcattatagtaaaagtatagcttatcgcatcaaaagtagtatcaattgttgattgttctagtttgtgtaaaatgttaaa 23237859  T
Q  101 aagtgacaattaaa 114  Q
    | || |||||||||    
T  23237860 atgtaacaattaaa 23237873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36408853 - 36408966
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||| ||| ||||| |||||||||||| ||||||| ||||||||||||||| || || ||| | || ||| ||||  || ||||||||| |||||    
T  36408853 tgagatattgaattaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaa 36408952  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  36408953 atgtgacaattaaa 36408966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36423019 - 36423132
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||| ||| ||||| |||||||||||| ||||||| ||||||||||||||| || || ||| | || ||| ||||  || ||||||||| |||||    
T  36423019 tgagatattgaattaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaa 36423118  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  36423119 atgtgacaattaaa 36423132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44549773 - 44549886
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||||| ||||||| || ||| ||||||||||  | || |||  | ||||||||||||    
T  44549773 tgagatgttaaatgaataaggtcattataataaaagtataacttattgtatcaaaagtagtaataattattgatcgttttgatttatataaaatatcaaa 44549872  T
Q  101 aagtgacaattaaa 114  Q
     ||||| |||||||    
T  44549873 cagtgataattaaa 44549886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 47751660 - 47751773
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||||   ||||||||| |||||| | |||||| |||||||||| ||||| ||||  ||||| ||  || ||||||||| ||| |    
T  47751660 tgagatattaaatgaataaaactattatagtaaaagtatcaattattgtatcaaaaatagtaacatttataaattattttggtttgtgtaaaatgtcaca 47751759  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  47751760 aagtgacaattaaa 47751773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 50623551 - 50623656
Alignment:
Q  9 taaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgaca 108  Q
    ||||||||||| |||||||||||| ||||||| ||||||| ||||||| || || ||||| |||||| ||||  || ||||||||| | |||| ||||||    
T  50623551 taaatgaataaggtcattatagtaaaagtatagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgttaaaatgtgaca 50623650  T
Q  109 attaaa 114  Q
    ||||||    
T  50623651 attaaa 50623656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35381529 - 35381420
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||| ||||||    ||||||| || ||||||| ||| | ||||||||||  |||||||| |||||    
T  35381529 tgagatattaaatgaataaggtcattataataaaagtacaactta----atcaaaagtagtaacaatcattaactatcttaatttatgtaaaatgtcaaa 35381434  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  35381433 atgtgacaattaaa 35381420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8741738 - 8741671
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaatt 68  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||| ||||| |||||    
T  8741738 tgagatattaaatgaataaggtcattataataaaagtatagcttattgcatcaaaagtaatatcaatt 8741671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26620465 - 26620352
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| ||||||||| || ||||||| ||||||||||||||| || || ||||| ||| || | ||  || ||| ||||| |||||    
T  26620465 tgagatattaaattaataaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgtttgttttggtttgtgcaaaatgtcaaa 26620366  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  26620365 atgtgacaattaaa 26620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 47093949 - 47094016
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatt 75  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||    
T  47093949 ttaaattaataagatcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgatt 47094016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 52257903 - 52257792
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||||| |||||| || | ||| ||||||| ||||||| | ||||| ||  |||||||| |||||||    
T  52257903 agatattaaatgactaaggctattatagtaaaagtataaattattgtataagaaaaaataacatttattgagtgtcttagtttatgtaaaatgtcaaaaa 52257804  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  52257803 gtgacagttaaa 52257792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 55935239 - 55935350
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||| | |||||| || | ||| | ||||| ||||||| | |||| ||| |||||||||||||||||    
T  55935239 agatattaaatgactaaggctattatagtaaaagtatgaattattgtataagaaaaagtaacatttattgagtgtcttgatttgtgtaaaatatcaaaaa 55935338  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  55935339 gtgacagttaaa 55935350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 3436177 - 3436068
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| || ||||||||| |||||||  |||||||||||||| || ||  |||| |||||| ||||  || ||||||||| |||||| ||    
T  3436177 atattaaattaataaggttattatagtaaaagtatagtttattgcatcaaaagtagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 3436078  T
Q  105 gacaattaaa 114  Q
    || |||||||    
T  3436077 gataattaaa 3436068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 4201428 - 4201375
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaat 58  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||    
T  4201428 atattaaatgaataaggtcattatagtaaaagtacaacttattgcataaaaaat 4201375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23719894 - 23719785
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||| | ||||||| | ||||| ||  |||||||| ||||||| |    
T  23719894 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttagtttatgtaaaatgtcaaaaaat 23719795  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  23719794 aacaattaaa 23719785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39683828 - 39683715
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  || ||||| || || |||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| | |||    
T  39683828 tgagatattaaatgaataagatcgttatactaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtgaaa 39683729  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  39683728 atgtgataattaaa 39683715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 42629451 - 42629560
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||| || |  ||| ||||| |||||||| ||| || | ||||| || ||||| ||||||||| ||||  || ||||||||||||||||| |    
T  42629451 atattaaatgaaaaaggctattttagtacaagtataaattactgtaccaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaaat 42629550  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  42629551 gacaattaaa 42629560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 6091465 - 6091366
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| |||||  ||||||||| |||||||| |||||| || ||||||||||| | ||||||| | |||| ||| || | |||| |||||||    
T  6091465 agatattaaatgactaaagctattatagtaaaagtataaattattgtataaaaaataataagatttattgagtgtcttgatttgtatgaaatctcaaaaa 6091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 23621962 - 23621911
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    ||||||||||||||| |||||||||||| |||||||  ||||||||||||||    
T  23621962 atattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaa 23621911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 33809261 - 33809330
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||| || ||||| ||||||||| | || ||| ||||||||| | |||||||||||||||||    
T  33809261 attgcatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatgttaaaaagtgacaattaaa 33809330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 47596723 - 47596614
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||| | | ||| |||| |||||| ||||||| || ||||| ||||||| | | ||  || ||||||||| ||||||| |    
T  47596723 atattaaatgaataaggttattattggaaaaggataatttattgtatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaat 47596624  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  47596623 gacaattaaa 47596614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 40412894 - 40412934
Alignment:
Q  348 cttactacaattagtaagcgacctatttgtaaacactaaac 388  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  40412894 cttactagaattagtaagcgacctacttgtaaacactaaac 40412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 49089102 - 49089149
Alignment:
Q  67 ttattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||| ||||  |||| |||||||||||||||||||||||||||    
T  49089102 ttattgattgtcttggttcgagtaaaatatcaaaaagtgacaattaaa 49089149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 32239533 - 32239581
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    |||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  32239533 atattaaatgaataaagtcat---agtaaaagtatagcttattgcatcaaaa 32239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 42133211 - 42133280
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| |||||||||| ||||| ||||||||| | ||  || |||||||||||  ||||||||||||||||    
T  42133211 attgtatcaaaaatagtaacatttattgattgttttggtttgtgtaaaatattgaaaagtgacaattaaa 42133280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 43888171 - 43888224
Alignment:
Q  61 taacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||| ||||||||| ||||  ||  ||||||||||||||||||||||||||||    
T  43888171 taacatttattgattctcttggtttatgtaaaatatcaaaaagtgacaattaaa 43888224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52677259 - 52677222
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagta 38  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  52677259 tgagatattaaatgaataaggtcattatagtaaaagta 52677222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28447095 - 28446982
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||  || ||||||||| |||||    
T  28447095 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgtatcaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaa 28446996  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  28446995 aagtgacaattaaa 28446982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4017523 - 4017636
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||| |||||    
T  4017523 tgagatgttaaatgaataaggttattatagtaaaagaataacttattgcatcaaaagtaaaaacaattattgattatcttgatttgtgtaaaatgtcaaa 4017622  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  4017623 aagtgacaattaaa 4017636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7403961 - 7404074
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| || ||||| |||||||||||  ||  ||||||||||||||    
T  7403961 tgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaaatagtatcaattgttgattatcttggtttatgtaaaatatcaaa 7404060  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  7404061 atgtgacaattaaa 7404074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14793900 - 14793787
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||  || ||||||||| |||||    
T  14793900 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaaatagtaataattattgattatattggtttgtgtaaaatgtcaaa 14793801  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  14793800 atgtgacaattaaa 14793787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 40198897 - 40199010
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||| |||||| |||| ||  |||||||||||||||    
T  40198897 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatctgtgtaaaatatcaaa 40198996  T
Q  101 aagtgacaattaaa 114  Q
    |||| |||||||||    
T  40198997 aagtaacaattaaa 40199010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 26854202 - 26854092
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || |||||||||||||||||  || ||||||||| |||||| |    
T  26854202 gatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgtcaaaatg 26854103  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  26854102 tgacaattaaa 26854092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 38910385 - 38910495
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || ||||| |||||||||||  || ||||||||| |||||| |    
T  38910385 gatattaaatgaataaagtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatg 38910484  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  38910485 tgacaattaaa 38910495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8229913 - 8229801
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||| || || ||    
T  8229913 tgagatgttaaatgaataaggtcactatagtaaaagtataacttattgcatcaaaagtattaacaattattgattgtcttaatttgtgtaagatgtc-aa 8229815  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  8229814 aagtgacaattaaa 8229801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12870005 - 12869896
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||||||||  || || ||||||||||||| ||    
T  12870005 atattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatatcaaaatgt 12869906  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  12869905 gacaattaaa 12869896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 42911659 - 42911772
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||   ||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||  || |||||||||||||||    
T  42911659 tgagatgttaaatgaatatgatcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatatcaaa 42911758  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  42911759 atgtgacaattaaa 42911772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 2674086 - 2673975
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| ||||||     
T  2674086 agatattaaatgaataaaatcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaat 2673987  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  2673986 gtgacaattaaa 2673975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24074946 - 24074835
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||||| || ||||||||||||||| | ||  || ||||||||| ||||||     
T  24074946 agatattaaatgaataagttcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgttttggtttgtgtaaaatgtcaaaat 24074847  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  24074846 gtgacaattaaa 24074835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4098440 - 4098553
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||| ||||||| ||||| ||||| |||||| ||||  || ||||||||| |||||    
T  4098440 tgagatattaaatgaataaggtcattatagtaaaggtataacttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatgtcaaa 4098539  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  4098540 atgtgacaattaaa 4098553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6072561 - 6072654
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaat 94  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| |||||||| |||||||||    
T  6072561 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaat 6072654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28024369 - 28024256
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||  || ||||||||| |||||    
T  28024369 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaataattattgattgtcttggttggtgtaaaatgtcaaa 28024270  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  28024269 atatgacaattaaa 28024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39073153 - 39073266
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  39073153 tgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 39073252  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  39073253 atgtgacaattaaa 39073266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 4985283 - 4985172
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||| || |||||| |||||||| ||||  |  ||||||||| ||||||     
T  4985283 agatattaaatgaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttggtatgtgtaaaatgtcaaaat 4985184  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  4985183 gtgacaattaaa 4985172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 6754287 - 6754176
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||  | |||||||||||| ||||  || ||||||||| ||||||     
T  6754287 agatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtatgatcaattattgattgtcttggtttgtgtaaaatgtcaaaat 6754188  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  6754187 gtgacaattaaa 6754176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 36239569 - 36239680
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||||||||||| || |||||| |||||||| |||| ||  ||||||||| ||||||     
T  36239569 agatattaaattaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttgatatgtgtaaaatgtcaaaat 36239668  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  36239669 gtgacaattaaa 36239680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 38017384 - 38017274
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| | |||| |    
T  38017384 gatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttcgtttgtgtaaaatgttaaaatg 38017285  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  38017284 tgacaattaaa 38017274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5119287 - 5119400
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| || ||||||||| ||||||||||||||||||||||| ||  |||||||||||||| | |||||| || |||||||| |||    
T  5119287 tgagatgttaaattaataaggttattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtattaatttgtataaaatattaaa 5119386  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  5119387 aaatgacaattaaa 5119400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8825166 - 8825279
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||||| || || ||||| |||||| |||| ||| ||||||||| |||||    
T  8825166 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaa 8825265  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  8825266 atgtgataattaaa 8825279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38363298 - 38363411
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  38363298 tgagatattaaatgaataaagtcattatagtaaaagtatagtttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 38363397  T
Q  101 aagtgacaattaaa 114  Q
      ||||||||||||    
T  38363398 ttgtgacaattaaa 38363411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 9127459 - 9127348
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| | |||||||| ||||| ||| ||  ||  |||||||| ||||||     
T  9127459 agatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtgataacaatcattgactattttggtttatgtaaaatgtcaaaat 9127360  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  9127359 gtgacaattaaa 9127348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4427516 - 4427402
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaa-ttattgattatcttaattcgtgtaaaatatcaa 99  Q
    |||||| |||||||| | | |||||||||||| ||||||||||||||| ||||||| ||  || || ||| ||||| |||| ||||||||||||||||||    
T  4427516 tgagatgttaaatgagtgaggtcattatagtaaaagtataacttattgtatcaaaagtagcaataaattactgattgtcttgattcgtgtaaaatatcaa 4427417  T
Q  100 aaagtgacaattaaa 114  Q
    |||||||||||||||    
T  4427416 aaagtgacaattaaa 4427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4962296 - 4962185
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||  ||||||||||||||  ||  |||||||| |||||    
T  4962296 tgagatgttaaatgaataaaatcattatagtaaaagtataacttattgcatcaaaagtgataacggttattgattatcttggtttatgtaaaatgtcaaa 4962197  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  4962196 a--tgacaattaaa 4962185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9076180 - 9076293
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  9076180 tgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 9076279  T
Q  101 aagtgacaattaaa 114  Q
       |||||||||||    
T  9076280 ttatgacaattaaa 9076293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16124370 - 16124257
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || || ||||||||||||||||| || ||||||| ||||| ||| ||  ||  |||||||| |||||    
T  16124370 tgagatattaaatgaataaggtcattatagtaaaaatacaacttattgcatcaaaagtagtaacaatcattgactatattggtttatgtaaaatgtcaaa 16124271  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  16124270 atgtgacaattaaa 16124257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 31546104 - 31546000
Alignment:
Q  6 tattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtg 105  Q
    |||||| ||||| | |||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| ||||  || ||||||||| |||||| |||    
T  31546104 tattaattgaatcaggtcattgtagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaaggtg 31546005  T
Q  106 acaat 110  Q
    |||||    
T  31546004 acaat 31546000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7579778 - 7579664
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaa-taataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||| |||||| || || ||||| |||||| | ||  || ||||||||||||||    
T  7579778 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcaacaaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaa 7579679  T
Q  100 aaagtgacaattaaa 114  Q
    || ||||||||||||    
T  7579678 aatgtgacaattaaa 7579664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1088043 - 1087930
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||||||| |||||||| || ||||  |||||||||||||| || || ||||| |||||| ||||  || ||||||||| | |||    
T  1088043 tgagatattaaatgaataaagtcgttatagtaaaaatatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgttaaa 1087944  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  1087943 atgtgacaattaaa 1087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2134016 - 2133916
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||  ||  |||||||| |||||    
T  2134016 tgagatgttaaattaataaggtcattatagtaaaagtataacttattgcatc-aaaatagtaacaattattgattgtcttggtttatgtaaaatgtcaaa 2133918  T
Q  101 aa 102  Q
    ||    
T  2133917 aa 2133916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4175590 - 4175477
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||||||| ||||||| || || ||||| || ||| ||||  || ||||||||| |||||    
T  4175590 tgagatattaaatgaataaggttattatagtaaaagtatagcttattgtatcaaaagtagtatcaattgtttattgtcttgctttgtgtaaaatgtcaaa 4175491  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  4175490 atgtgacaattaaa 4175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6689708 - 6689821
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||||||  ||||||||||| ||||||| ||||||| |||||||||| ||||||||||| ||| | || ||| ||||||||| | |||    
T  6689708 tgagatgttaaatgaataagatcattatagtaaaagtatagcttattgtatcaaaaatagtaacaattattaattgttttgatttgtgtaaaatgtaaaa 6689807  T
Q  101 aagtgacaattaaa 114  Q
    || | |||||||||    
T  6689808 aaataacaattaaa 6689821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 10359341 - 10359232
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| || || ||||| |||||| | ||  || ||||||||| |||||| ||    
T  10359341 atattaaatgaataaggtcatcatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgt 10359242  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  10359241 gacaattaaa 10359232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18020878 - 18020765
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||||||| |||| || || ||||| |||||| ||||  |  ||||||||| |||||    
T  18020878 tgagatatcaaatgaataaggtcattatagtaaaagtatagcttattgcattaaaagtagtatcaattgttgattgtcttggtctgtgtaaaatgtcaaa 18020779  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  18020778 atgtgacaattaaa 18020765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18437433 - 18437320
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||| ||||| ||||| || ||||||||| ||||||||  ||||| |||||||||  ||||| ||||||||| | ||  || |||||||||||||||    
T  18437433 tgagataataaataaataaggttattatagtaaaagtataaagtattgtatcaaaaatggtaacatttattgattgtattggtttgtgtaaaatatcaaa 18437334  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  18437333 aagtgacaattaaa 18437320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25344069 - 25344182
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| || |||| ||||||||||||||| ||  | ||||| |||||| |||| ||| |||||||||  ||||    
T  25344069 tgagatattaaatgaataaggttattatagtaaaaatatagcttattgcatcaaaagtaggatcaattgttgattgtcttgatttgtgtaaaatgacaaa 25344168  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  25344169 atgtgacaattaaa 25344182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4694873 - 4694952
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||| ||||||||| || |||||||||||| |||||||||||||| |||||||| || || |||||||||||||||||    
T  4694873 tgagatgttaaatgaacaaggtcattatagtaaaagtataacttattacatcaaaagtattagcaattattgattatctt 4694952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 7834137 - 7834062
Alignment:
Q  39 taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||||||||| ||| || ||||||||||||| || ||| |||||||||||||||| ||||||||||||    
T  7834137 taacttattgcatcaaaagtaaaaataattattgattattttgatttgtgtaaaatatcaaaaggtgacaattaaa 7834062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 18794894 - 18795005
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||| |||||||| ||  | ||||| |||||| |||| ||| ||||||||| |||||      
T  18794894 agatattaaatgaataaggtcattatagtaaaagtatagcttattacatcaaaagtatgatcaattgttgattgtcttgatttgtgtaaaatgtcaaagt 18794993  T
Q  103 gtgacaattaaa 114  Q
    |||| |||||||    
T  18794994 gtgaaaattaaa 18795005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 38702252 - 38702363
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  ||  |||||||||| ||||     
T  38702252 agatattaaataaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatattaaaat 38702351  T
Q  103 gtgacaattaaa 114  Q
     |||||||||||    
T  38702352 atgacaattaaa 38702363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1297848 - 1297734
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatca-aaaataataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||| ||  |||| |||||| ||||| ||  | |||||| ||||    
T  1297848 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaaaatagtattaattgttgattgtcttagtttatataaaatgtcaa 1297749  T
Q  100 aaagtgacaattaaa 114  Q
    || || |||||||||    
T  1297748 aatgtaacaattaaa 1297734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12664967 - 12665080
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| | | ||||||||||||| || || ||||| |||||| ||||  ||  |||||||| |||||    
T  12664967 tgagatattaaatgaataaggtcattatagtaaaagtacatcatattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaa 12665066  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  12665067 atatgacaattaaa 12665080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22582581 - 22582686
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||||| || ||  |||| |||||| |||| ||| || |||||| |||||    
T  22582581 tgagatattaaatgaataaggtcattatagtacaagtatagtttattgcatcaaaagtagtataaattgttgattgtcttgatttgtataaaatgtcaaa 22582680  T
Q  101 aagtga 106  Q
    | ||||    
T  22582681 atgtga 22582686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 25027681 - 25027572
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |  ||||||||| |||||| | |||||| ||||||| || ||||| ||||||||| ||||| ||  |||||||| ||| |||||    
T  25027681 atattaaatgaataaggatattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttagtttatgtaaaatgtcacaaagt 25027582  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  25027581 gacaattaaa 25027572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34261421 - 34261534
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||| ||||||| || || ||||| |||||| ||||  || || |||||| |||||    
T  34261421 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgtatcaaaagtagtatcaattgttgattgtcttggtttgtctaaaatgtcaaa 34261520  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  34261521 atatgacaattaaa 34261534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19831652 - 19831560
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaa 93  Q
    ||||||||||||||||||| |||||||||||| |  ||||| |||||| |||||||||| ||||| ||||||||| ||||  || ||||||||    
T  19831652 tgagatattaaatgaataaggtcattatagtaaacatataaattattgtatcaaaaatattaacatttattgattgtcttggtttgtgtaaaa 19831560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 42393856 - 42393745
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||||| |||||| || | ||| ||||||| ||||||||||||||  || ||||||||| |||||||    
T  42393856 agatattaaatgactaaggctattatagtaaaagtataaattattgtataagaaaaaataacatttattgattatcttggtttgtgtaaaatgtcaaaaa 42393757  T
Q  103 gtgacaattaaa 114  Q
    | |||| |||||    
T  42393756 gcgacagttaaa 42393745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7408440 - 7408553
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||||| |||||| ||||||| || |||   ||||||||| | ||  || ||||||||| |||||    
T  7408440 tgagatattaaatgaataaggttattatagtaaaagtataaattattgtatcaaaagtattaatgtttattgattgttttggtttgtgtaaaatgtcaaa 7408539  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  7408540 agatgacaattaaa 7408553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 13703250 - 13703319
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| |||||||||| ||| | ||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  13703250 attgtatcaaaaatagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaa 13703319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 37809872 - 37809981
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || ||  ||||||||||| ||||| ||   |||||||||||| || ||||| ||||| ||| ||||  || |||||||||||||||||||    
T  37809872 atattaaattaacaagatcattatagtaaaagtaaaaacaattgcatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagt 37809971  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  37809972 gacaattaaa 37809981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 39893915 - 39893806
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || ||||| ||||||||||| ||  || ||||||||| | |||||||    
T  39893915 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaagtagtaacacttattgattattttggtttgtgtaaaatgttaaaaagt 39893816  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  39893815 gacaattaaa 39893806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 30368244 - 30368132
Alignment:
Q  2 gagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    |||||||||||| ||||| || ||||||||| || || || |||||  |||||||||| ||||| ||||||||| ||||| || ||||||||| | ||||    
T  30368244 gagatattaaataaataaggttattatagtaaaaataaaaattattatatcaaaaatagtaacatttattgattgtcttagtttgtgtaaaatgttaaaa 30368145  T
Q  102 agtgacaattaaa 114  Q
     || |||||||||    
T  30368144 tgtaacaattaaa 30368132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 38297597 - 38297522
Alignment:
Q  39 taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||||||||| ||  |||||||||||||| ||||  || ||||||||| | |||||||||||||||||    
T  38297597 taacttattgcatcaaaagtagaaacaattattgattgtcttgttttgtgtaaaatgttaaaaagtgacaattaaa 38297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 32389099 - 32389209
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| | |||||||||| ||||| || | |||| ||||||| || ||||| ||||||||| ||||  ||  |||||||| | |||||||    
T  32389099 atattaaattaataaggccattatagtaaaagtaaaaataattgtatcaaaagtagtaacacttattgattgtcttggtttatgtaaaatgttaaaaagt 32389198  T
Q  105 gacaattaaat 115  Q
    |||||||||||    
T  32389199 gacaattaaat 32389209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 1795225 - 1795124
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| |||||  ||||||||| |||||||| |||||| || | ||| | ||||| ||||||| | |||| ||| ||||||||| |||||||    
T  1795225 agatattaaatgactaaagctattatagtaaaagtataaattattgtataagaaaaagtaacatttattgagtgtcttgatttgtgtaaaatgtcaaaaa 1795126  T
Q  103 gt 104  Q
    ||    
T  1795125 gt 1795124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 3892925 - 3893033
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||||||||||  ||||||||||  ||| ||| ||||||||| ||||||| |    
T  3892925 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaaataataa-tattattgattgacttgatttgtgtaaaatgtcaaaaaat 3893023  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  3893024 aacaattaaa 3893033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 7466295 - 7466404
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||| | ||||| || | |||| || |||| |||||||| ||||| ||| |||| |||  |||||||||||||||| |    
T  7466295 atattaaattaataaggtcattatagcaaaagtaaaaataattgtattaaaagtaataacatttattaattgtcttgatttatgtaaaatatcaaaaaat 7466394  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  7466395 aacaattaaa 7466404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 31803437 - 31803546
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || || ||| || ||||| ||||| || | |||| ||||||| || ||||| ||||| ||| |||| ||| ||||||||| |||||||||    
T  31803437 atattaaattaacaaggtcgttttagtaaaagtaaaaataattgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagt 31803536  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  31803537 gacaattaaa 31803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37303217 - 37303104
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| || || |||||||| |||||||| || ||| ||| || || || |||| ||  |||||||| |||||    
T  37303217 tgagatattaaatgaataagatcattatagtaaaaatacaacttattacatcaaaagtagtaataatcatcgactaccttagtttatgtaaaatgtcaaa 37303118  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  37303117 atatgacaattaaa 37303104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 37633789 - 37633898
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || ||  ||||||||||| ||||| ||   |||| ||||||| || ||||| ||||| ||| ||||  || |||||||||||||||||||    
T  37633789 atattaaattaacaagatcattatagtaaaagtaaaaacaattgtatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagt 37633888  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  37633889 gacaattaaa 37633898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 28463493 - 28463393
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| | ||||| ||||||| | ||||  || |||||||||||||||||    
T  28463493 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaa 28463394  T
Q  103 g 103  Q
    |    
T  28463393 g 28463393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 5144106 - 5144007
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  |||||| || |||||||| |||||| || || || | ||||| ||||||| | |||||||| |||||||||||||||||    
T  5144106 agatattaaatgactaaggctattataataaaagtataaattattgtataaataaaagtaacatttattgagtgtcttaatttgtgtaaaatatcaaaaa 5144007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 26906601 - 26906712
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||| | || ||||| | | ||| |||| |||||| ||||||| || ||| | ||||||| | | ||  || |||||||||||||||||    
T  26906601 agatattaaatgaatgatgttattattggaaaaggataaattattgtatcaaaagtagtaagatttattgaatgttttggtttgtgtaaaatatcaaaaa 26906700  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  26906701 gtgacaattaaa 26906712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3243905 - 3244018
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |  ||||||| | ||  | || |||||| || ||||||| ||||| ||||| ||| |||| |||  |||||||| |||||    
T  3243905 tgagatattaaatgaataaggctattataggaaaaacaaaaattattgtataaaaaatagtaacatttattaattgtcttgatttatgtaaaatgtcaaa 3244004  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  3244005 aaatgacaattaaa 3244018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12784548 - 12784440
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| |||||  ||||| ||||| ||||| |||  |||| ||||||| || ||||| ||||||||| ||||  || ||||||||| |||||||||    
T  12784548 atattaaattaataagatcattttagtaaaagtaaaaca-attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatgtcaaaaagt 12784450  T
Q  105 gacaattaaa 114  Q
    || |||||||    
T  12784449 gagaattaaa 12784440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 38502894 - 38502801
Alignment:
Q  21 gtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||| ||||| |||||||| |||||||| || ||||||| ||||| ||| ||  || ||||||||| | |||| || |||||||||    
T  38502894 gtcattatagtaaaagtacaacttattacatcaaaagtagtaacaatcattgactattttggtttgtgtaaaatgttaaaatgtaacaattaaa 38502801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 18465812 - 18465880
Alignment:
Q  7 attaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatt 75  Q
    |||||||||| ||| | ||||||||| |||||||||||||| |||||||| || || ||||| ||||||    
T  18465812 attaaatgaacaaaattattatagtaaaagtataacttattacatcaaaagtagtatcaattgttgatt 18465880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 38297724 - 38297620
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||| |||| ||| |  ||||||||| |||||||| |||||| || | ||| | ||||| ||||||| | ||||| || ||||||||| |||||||    
T  38297724 agatattacatgattaaggcgattatagtaaaagtataaattattgtataagaaaaagtaacatttattgagtgtcttagtttgtgtaaaatgtcaaaaa 38297625  T
Q  103 gtgac 107  Q
    |||||    
T  38297624 gtgac 38297620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 38308234 - 38308130
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||| | |||||| || ||||| | ||||| ||||||| | ||||  || ||||||||| |||||||    
T  38308234 agatattaaatgactaaggctattatagtaaaagtatgaattattgtataaaaaaaagtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaa 38308135  T
Q  103 gtgac 107  Q
    |||||    
T  38308134 gtgac 38308130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4688908 - 4688865
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataactt 44  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||    
T  4688908 tgagatattaaatgaataaggtcattaaagtaaaagtataactt 4688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 24229059 - 24229170
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||| ||||||||| || ||||||||| |||| ||  || ||| ||||||| || ||||| ||||||| | ||||  || ||||||||||||| |||    
T  24229059 agatattgaatgaataaggttattatagtaaaagtgtatattgttgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatatcagaaa 24229158  T
Q  103 gtgacaattaaa 114  Q
      ||||||||||    
T  24229159 aagacaattaaa 24229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 6008037 - 6008107
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatc-aaaaagtgacaattaaa 114  Q
    |||| ||||||| || ||||||||||||||| | ||  || |||||||||||| |||||||||||||||||    
T  6008037 attgtatcaaaagtagtaacaattattgattgtattggtttgtgtaaaatatcaaaaaagtgacaattaaa 6008107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12723065 - 12722956
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| |||||  ||||| ||||| ||||| ||   |||| ||||||| || ||| | ||||||||| ||||  || ||||||||| |||||||||    
T  12723065 atattaaattaataagatcattttagtaaaagtaaaaacaattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgtcaaaaagt 12722966  T
Q  105 gacaattaaa 114  Q
    || |||||||    
T  12722965 gagaattaaa 12722956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 37306805 - 37306696
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || || |||||||||||| |||||  |   |||| ||||||| || ||||| ||||| ||| ||||  || ||||||||| | |||||||    
T  37306805 atattaaattaacaaggtcattatagtaaaagtaagaacaattgtatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatgttaaaaagt 37306706  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  37306705 gacaattaaa 37306696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3837989 - 3838102
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||| ||| | ||||||| |||||    
T  3837989 tgagatgttaaatgaataaggtcattatagtaaaagtataacttatggcatcaaaagtaataacaattattgattgtcttgatttgcgtaaaatgtcaaa 3838088  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  3838089 aagtgacaattaaa 3838102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 36298288 - 36298177
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||||||||||| | || ||| ||||||||| ||||||     
T  36298288 agatattaaatgaataaagtcattatagtaaaaatataacttattgcatcaaaagtagtaacaattattgattgttttgatttgtgtaaaatgtcaaaat 36298189  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  36298188 gtgacaattaaa 36298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33099951 - 33099838
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  33099951 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 33099852  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33099851 atgtgacaattaaa 33099838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7312744 - 7312855
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| |||| ||| |||||||||||||||    
T  7312744 tgagatattaaataaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatatcaaa 7312843  T
Q  101 aagtgacaatta 112  Q
    | ||||||||||    
T  7312844 atgtgacaatta 7312855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38168905 - 38168791
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataac-aattattgattatcttaattcgtgtaaaatatcaa 99  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||| |||| ||||| ||||| ||||  || ||||||||||| ||    
T  38168905 tgagatgttaaatgaataaggtcattataataaaagtataacttattgcatcaaaaatagtaacaaattaatgattgtcttggtttgtgtaaaatattaa 38168806  T
Q  100 aaagtgacaattaaa 114  Q
    |||||||||||||||    
T  38168805 aaagtgacaattaaa 38168791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7477314 - 7477201
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||||| ||  |||||||| |||||    
T  7477314 tgagatattaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaa 7477215  T
Q  101 aagtgacaattaaa 114  Q
    | || |||||||||    
T  7477214 atgtaacaattaaa 7477201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8381953 - 8382066
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| |||||    
T  8381953 tgagatattaaatgaataaggtcattatagtaaaagtatatcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 8382052  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  8382053 atgtgataattaaa 8382066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10227383 - 10227496
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||| ||  || ||||||||||| |||| ||| ||||||||| | |||    
T  10227383 tgagatgttaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagtagaaataattattgattgtcttgatttgtgtaaaatgttaaa 10227482  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  10227483 aagtgacaattaaa 10227496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32966165 - 32966052
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |  || ||||| |||||| |||||||| ||||||||| | |||    
T  32966165 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtggtatcaattgttgattgtcttaatttgtgtaaaatgttaaa 32966066  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  32966065 atgtgacaattaaa 32966052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 41891401 - 41891510
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||| ||    
T  41891401 atattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 41891500  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  41891501 gacaattaaa 41891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 26724053 - 26724165
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||| ||| ||||||| ||||  || ||||||||| |||||||    
T  26724053 agatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaataatcattgattgtcttggtttgtgtaaaatgtcaaaaa 26724152  T
Q  103 -gtgacaattaaa 114  Q
     ||||||||||||    
T  26724153 tgtgacaattaaa 26724165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5732189 - 5732076
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| |||||    
T  5732189 tgagattttaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 5732090  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  5732089 atgtgacaattaaa 5732076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31430686 - 31430799
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| ||||||| |||||||||| ||||||| || ||||| |||||| ||||  || ||||||||| |||||    
T  31430686 tgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 31430785  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  31430786 atgtgacaattaaa 31430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33921890 - 33921777
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| ||  |||||||| | |||    
T  33921890 tgagatattaaatgaataaggtcattatagtaaaaatataatttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgttaaa 33921791  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33921790 atgtgacaattaaa 33921777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12838194 - 12838081
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| | ||||| ||||||| ||||||| ||||| ||||| |||||| ||||  || |||||||||||||||    
T  12838194 tgagatattaaataaataaggttattatagtaaaggtatagcttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatatcaaa 12838095  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  12838094 atgtgacaattaaa 12838081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36922366 - 36922480
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaa-taataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    ||||||||||||||||||| |||||||||||| ||  ||| |||||||||||||||| ||||| ||||| |||||| |||| |||  | |||||| ||||    
T  36922366 tgagatattaaatgaataaggtcattatagtaaaaacatagcttattgcatcaaaaagtaatatcaattgttgattgtcttgatttatttaaaatgtcaa 36922465  T
Q  100 aaagtgacaattaaa 114  Q
    || ||||||||||||    
T  36922466 aatgtgacaattaaa 36922480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32528444 - 32528331
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||| ||  | ||||| |||||| |||| ||| || |||||| |||||    
T  32528444 tgagatattaaatgaataagatcattatagtaaaagtatagcttattgcatcaaaagtagcatcaattgttgattgtcttgatttgtataaaatgtcaaa 32528345  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  32528344 atatgacaattaaa 32528331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 35746757 - 35746648
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| | |||||||||| ||||| || | |||| |||||||||| ||||| ||||||||| ||||||||  |||||||| | |||||||    
T  35746757 atattaaattaataaggccattatagtaaaagtaaaaataattgtatcaaaaatagtaacatttattgattgtcttaatttatgtaaaatgttaaaaagt 35746658  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  35746657 gacaattaaa 35746648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 47408244 - 47408353
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||||| ||||||| | ||||  || ||||||||| |||||||||    
T  47408244 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagt 47408343  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  47408344 gacaattaaa 47408353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44480258 - 44480158
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| |||||||||| ||||||| || ||||| |||||| ||||  || ||||||||| |||||    
T  44480258 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcataaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 44480159  T
Q  101 a 101  Q
    |    
T  44480158 a 44480158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26632296 - 26632238
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaata 59  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  26632296 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaaata 26632238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18470434 - 18470547
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||||| |||| || || ||||| |||||| ||||  || | ||||||||| |||    
T  18470434 tgagatattaaatgaataaggtcgttatagtaaaagtatagcttattgcataaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatattaaa 18470533  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  18470534 atgcgacaattaaa 18470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33258008 - 33258121
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |  ||||| ||||||| || ||| | ||||||||| | || ||| ||||||||| |||||    
T  33258008 tgagatattaaatgaataaggttattatagtaaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaaa 33258107  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  33258108 aaatgacaattaaa 33258121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 37353979 - 37353878
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||||||||| |||||||||||| || | ||||||||||||||| || || ||||||||||||||| | || |||| |||||||| |||| |||| ||    
T  37353979 ttaaatgaataaggtcattatagtaaaaatgtaacttattgcatcagaagtagtaacaattattgattgttttgattcatgtaaaatgtcaacaagtaac 37353880  T
Q  108 aa 109  Q
    ||    
T  37353879 aa 37353878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 41675298 - 41675190
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| ||| |||||||| || |||| ||||||||||||||||| | | |||||||||||| ||||  ||  |||||||| |||||| ||    
T  41675298 atattaaatgaataaggtcgttatagtaaaactatagcttattgcatcaaaaat-agatcaattattgattgtcttggtttatgtaaaatgtcaaaatgt 41675200  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  41675199 gacaattaaa 41675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 45324153 - 45324218
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaatt 68  Q
    ||||||||||| |||||| |||||||| || |||||||||||||||||||||||||||||| ||||    
T  45324153 agatattaaataaataaaatcattataataaaagtataacttattgcatcaaaaataataataatt 45324218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17896639 - 17896572
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaatt 68  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| ||||| |||||    
T  17896639 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaatt 17896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 29497648 - 29497537
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| |||| |||| || || ||||| |||||| || |  || ||||||||| ||||||     
T  29497648 agatattaaatgaataaggtcattatagtaaaagtatagcttatggcataaaaagtagtatcaattgttgattgtcctggtttgtgtaaaatgtcaaaat 29497549  T
Q  103 gtgacaattaaa 114  Q
    |||| |||||||    
T  29497548 gtgataattaaa 29497537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36648121 - 36648011
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| || || |||||||||||| ||| ||||||||||||||||||| ||| || ||||||||||| ||||  || ||||||||| |  ||    
T  36648121 tgagatgttaaattaacaaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaataattattgattgtcttggtttgtgtaaaatgt-taa 36648023  T
Q  101 aagtgacaatta 112  Q
    ||||||||||||    
T  36648022 aagtgacaatta 36648011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 42841978 - 42841869
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||| || || |||||||||||| ||||| ||||  |||| ||||||| || ||||| ||||||||| ||||  || ||||||||||||||||||    
T  42841978 atattaaattaacaaggtcattatagtaaaagtaataaca-attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaag 42841880  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  42841879 tgacaattaaa 42841869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8265076 - 8265189
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || ||||  ||||||||||||||  | || ||||| |||||| ||||  || ||||||||| |||||    
T  8265076 tgagatattaaattaataaggttattatagtaaaaatatagtttattgcatcaaaaggagtatcaattgttgattgtcttggtttgtgtaaaatttcaaa 8265175  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  8265176 atgtgacaattaaa 8265189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22950934 - 22950821
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||| ||||||| || || ||||| || ||| ||||  || ||||||||| |||||    
T  22950934 tgagatattaaatgaataatgtcattataataaaagtatagcttattgtatcaaaagtagtatcaattttttattgtcttggtttgtgtaaaatgtcaaa 22950835  T
Q  101 aagtgacaattaaa 114  Q
    |  | |||||||||    
T  22950834 atataacaattaaa 22950821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 28608725 - 28608834
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||  |||| ||||||||| |||| ||| ||||||||||||||||  |    
T  28608725 atattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatatcaaaatat 28608824  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  28608825 gacaattaaa 28608834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 29722418 - 29722310
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| || || | ||| |||||| ||||  || | ||||||| | ||||     
T  29722418 agatattaaataaataa-gtcattatagtaaaagtataacttattgcatcaaaagtagtatcgattgttgattgtcttggtttgcgtaaaatgttaaaat 29722320  T
Q  103 gtgacaatta 112  Q
    ||||||||||    
T  29722319 gtgacaatta 29722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33173934 - 33174047
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||||||  |||||||| || ||||| ||||||||| ||||||| || ||||||| ||||| ||| ||  ||  |||||||| |||||    
T  33173934 tgagattttaaatgaataagatcattatattaaaagtacaacttattgtatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaa 33174033  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33174034 atgtgacaattaaa 33174047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 34368771 - 34368663
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| ||||||  |||| ||||| ||   |||| ||||||| |||||| | ||||| ||| |||||||| |||||||||||||||||||    
T  34368771 atattaaattaataaggtcattgcagtaaaagtaaaaacaattgtatcaaaagtaataata-ttattaattttcttaatttgtgtaaaatatcaaaaagt 34368673  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  34368672 gacaattaaa 34368663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35112556 - 35112669
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| |||||||| ||||||||| || ||| |  ||||| ||||||| || ||| | ||||||||| | ||  || ||||||||| |||||    
T  35112556 tgagatattaaataaataaagttattatagtaaaaatatgaagtattgtatcaaaagtagtaatatttattgattgtatttgtttgtgtaaaatgtcaaa 35112655  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  35112656 aagtgacaattaaa 35112669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20035175 - 20035254
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||||||||||||||||  ||||||||||| ||||||| |||||||||| ||||  |||| ||||| |||||| ||||    
T  20035175 tgagatattaaatgaataagatcattatagtaaaagtatagcttattgcattaaaaggaatatcaattgttgattgtctt 20035254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20045586 - 20045665
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||||||||||||||||  ||||||||||| ||||||| |||||||||| ||||  |||| ||||| |||||| ||||    
T  20045586 tgagatattaaatgaataagatcattatagtaaaagtatagcttattgcattaaaaggaatatcaattgttgattgtctt 20045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 31815180 - 31815072
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| |||||   |||||||||| ||||| || | |||| ||||||| || ||||| |||||||||||||| ||| ||||||||| | ||||| |    
T  31815180 atattaaattaataagaccattatagtaaaagtaaaaataattgtatcaaaagtagtaaca-ttattgattatcttgatttgtgtaaaatgttaaaaaat 31815082  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  31815081 gacaattaaa 31815072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 41409980 - 41409872
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| | ||||||| || ||||| ||   |||| ||||||| |||||||| ||||| ||| |||| ||| |||||||||   |||||||    
T  41409980 atattaaattaataaggccattataataaaagtaaaaacaattgtatcaaaattaataacatttattaattgtcttgatttgtgtaaaatgataaaaagt 41409881  T
Q  105 gacaattaa 113  Q
    |||||||||    
T  41409880 gacaattaa 41409872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 24283711 - 24283819
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || ||||||||||||||| ||||| || | |||  ||||||| || ||||| ||||| ||| ||||| || ||||||||  | ||||| |    
T  24283711 atattaaattaacaaagtcattatagtaaaagta-aaataattatatcaaaagtagtaacatttattaattgtcttagtttgtgtaaaaggtaaaaaaat 24283809  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  24283810 gacaattaaa 24283819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 41408864 - 41408795
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| ||||||| |||||||| ||||| ||| |||| ||| |||||||||   |||||||||||||||||    
T  41408864 attgtatcaaaattaataacatttattaattgtcttgatttgtgtaaaatgataaaaagtgacaattaaa 41408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17124099 - 17123986
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||||| || ||||||||| |||||    
T  17124099 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattattgattgtcttagtttgtgtaaaatgtcaaa 17124000  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  17123999 atgtgacaattaaa 17123986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 1751544 - 1751432
Alignment:
Q  2 gagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| ||||||||||| ||| ||||||||| ||||||    
T  1751544 gagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaa 1751445  T
Q  102 agtgacaattaaa 114  Q
     ||||||||||||    
T  1751444 tgtgacaattaaa 1751432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22050177 - 22050288
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| || ||||||||||||||| ||||  || ||||||||| ||||||     
T  22050177 agatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaat 22050276  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  22050277 gtgacaattaaa 22050288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7056254 - 7056136
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||  || || ||||||||| ||| ||||||||||||||||||| ||| || |||||||||||||||| ||| ||||||||| |||||    
T  7056254 tgagatattaaatgaccaaggttattatagtaaaagaataacttattgcatcaaaagtaaaaataattattgattatcttgatttgtgtaaaatgtcaaa 7056155  T
Q  101 aagtgacaattaaataggt 119  Q
    |||||||||||||| ||||    
T  7056154 aagtgacaattaaaaaggt 7056136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8992675 - 8992789
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataac-aattattgattatcttaattcgtgtaaaatatcaa 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||| ||||| ||||||||||  || ||||||||||||||    
T  8992675 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaa 8992774  T
Q  100 aaagtgacaattaaa 114  Q
    || ||||||||||||    
T  8992775 aatgtgacaattaaa 8992789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9017122 - 9017236
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataac-aattattgattatcttaattcgtgtaaaatatcaa 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||| ||||| ||||||||||  || ||||||||||||||    
T  9017122 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaa 9017221  T
Q  100 aaagtgacaattaaa 114  Q
    || ||||||||||||    
T  9017222 aatgtgacaattaaa 9017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3621717 - 3621830
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  3621717 tgagatattaaatgaataatgtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 3621816  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  3621817 atgtgacaattaaa 3621830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24663506 - 24663619
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| |||||    
T  24663506 tgagatattaaatgaataatgtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 24663605  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  24663606 atgtgacaattaaa 24663619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26470837 - 26470724
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||| || |||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||  ||  |||||||| |||||    
T  26470837 tgagatgttaaatgaacaaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaaa 26470738  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  26470737 aagtgacaattaaa 26470724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 8176567 - 8176673
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||| ||  |||||||||||||| |||| ||| ||||||||| | ||||||||||    
T  8176567 ttaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttgatttgtgtaaaatgttaaaaagtgac 8176666  T
Q  108 aattaaa 114  Q
    |||||||    
T  8176667 aattaaa 8176673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 364652 - 364543
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||| ||| | ||||| |||||| ||||  || |||||||||||||||| ||    
T  364652 atattaaatgaagaaaatcattatagtaaaagtatagcttattgcatcaaaagtaagatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgt 364553  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  364552 gacaattaaa 364543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7632151 - 7632046
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| |||| |||  | |||||| |||||    
T  7632151 tgagatgttaaataaataaggtcattatagtaaaagtataacttattgcatcaaaaatagtaataattattgattgtcttgatttatataaaatgtcaaa 7632052  T
Q  101 aagtga 106  Q
    ||||||    
T  7632051 aagtga 7632046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3850447 - 3850560
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||| | ||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  3850447 tgagatattaaatgaataaggtcattatagtaaaaatatagcttgtggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 3850546  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  3850547 atgtgacaattaaa 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9838236 - 9838123
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |  ||||||||| |||||| | |||||| ||||||| || ||||| ||||||||| | || ||| ||||||||||||| |    
T  9838236 tgagatattaaatgaataaggctattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatatcaca 9838137  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  9838136 aaatgacaattaaa 9838123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 17836024 - 17836133
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||| |||| ||  | ||||| |||||| ||||  || |||||||||||||| | ||    
T  17836024 atattaaatgaataaggtcattatagtaaaagtatagcttattgcattaaaagtagaatcaattgttgattgtcttggtttgtgtaaaatatcaatatgt 17836123  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  17836124 gacaattaaa 17836133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 30416185 - 30416110
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||||||| || ||||||||||||||| ||||    
T  30416185 atattaaatgaataaggttattatagtaaaagtataacttattgtatcaaaagtagtaacaattattgattgtctt 30416110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 373850 - 373963
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| |||||||  |||||||||||||| || || |||||  ||||| ||||  ||  |||||||| |||||    
T  373850 tgagatattaaatgaataagatcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgctgattgtcttggtttatgtaaaatgtcaaa 373949  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  373950 atgtgacaattaaa 373963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1923979 - 1924092
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||     |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||  ||  | |||||| | |||    
T  1923979 tgagatattaaatgaataatactgttatagtaaaagtataaattatttcatcaaaattaataacatttattgattatcttggtttatataaaatgtgaaa 1924078  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  1924079 aagtgacaattaaa 1924092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 12732306 - 12732415
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||||||  ||||||||||| ||||||| ||||||||||||||| || || ||||| || ||| ||||  || ||||||||| | |||| ||    
T  12732306 atattaaatgaataatatcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttaattgtcttgttttgtgtaaaatgttaaaatgt 12732405  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  12732406 gacaattaaa 12732415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17193285 - 17193398
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||| ||  | ||||| |||||| ||||  ||  | |||||| |||||    
T  17193285 tgagatattaaatgaataaggtcattatagtaaaataataacttattgcatcaaaagtaggatcaattgttgattgtcttggtttatataaaatgtcaaa 17193384  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  17193385 acgtgacaattaaa 17193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 23777427 - 23777536
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||||| ||||| | | ||||  || ||||||||| |||||||||    
T  23777427 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttatttaatgtcttggtttgtgtaaaatgtcaaaaagt 23777526  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  23777527 gacaattaaa 23777536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23923827 - 23923714
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||| ||||||| |||||||||||| ||||||| |||||| ||| |||| || || ||||| |||||| ||||  || ||| ||||| |||||    
T  23923827 tgagatattaactgaataaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtttgtgcaaaatgtcaaa 23923728  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  23923727 atgtgacaattaaa 23923714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26485795 - 26485686
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||||| ||||||| | ||||  ||  |||||||| |||||||||    
T  26485795 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagt 26485696  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  26485695 gacaattaaa 26485686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11128962 - 11129071
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| || || ||   |||| ||||||| || ||||| ||||| ||| |||| ||| ||||||||| |||||||||    
T  11128962 atattaaattaataaggtcattatagtaaaaataaaaacaattgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagt 11129061  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  11129062 gacaattaaa 11129071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 11676725 - 11676616
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || ||| | ||||||||| ||||  || |||||||||||||||||||    
T  11676725 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatatcaaaaagt 11676626  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  11676625 aacaattaaa 11676616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32359554 - 32359441
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||| |||||||||  ||||||||||| ||||||| |||||||||||||||  | |  |||||||| ||| ||||  || || ||||||||||||    
T  32359554 tgagatatttaatgaataagatcattatagtaaaagtatagcttattgcatcaaaagaagtgtcaattattaattgtcttggtttgtataaaatatcaaa 32359455  T
Q  101 aagtgacaattaaa 114  Q
    | || |||||||||    
T  32359454 atgtaacaattaaa 32359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1252295 - 1252406
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| || ||||  ||||| |||||||| || || ||||| |||||| ||||| ||  | |||||| ||||||     
T  1252295 agatattaaatgaataaggtcattatagtaaaaatatagtttattacatcaaaagtagtatcaattgttgattgtcttagtttatataaaatgtcaaaat 1252394  T
Q  103 gtgacaattaaa 114  Q
    |||| |||||||    
T  1252395 gtgataattaaa 1252406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27313630 - 27313709
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||| ||||||||| ||  | ||||||| | ||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  27313630 tgagatgttaaatgaacaagataattatagaaaaagaataacttattgcatcaaaagtaaaaacaattattgattatctt 27313709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 1249689 - 1249779
Alignment:
Q  24 attatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||| || ||| | |||||| |||||||||| ||||| ||||||||| ||||| ||  | |||||||||| |||||||||||||||    
T  1249689 attatagtaaaaatatcaattattgtatcaaaaatagtaacatttattgattgtcttagtttatataaaatatcataaagtgacaattaaa 1249779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 31244859 - 31244750
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || || || ||||||||| ||||  || |||||||| ||||||| ||    
T  31244859 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaagtactaccatttattgattgtcttggtttgtgtaaaaaatcaaaatgt 31244760  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  31244759 gacaattaaa 31244750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 19645834 - 19645723
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcat--caaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||| || |  ||||||||| ||||||||  ||||| ||  ||||| || |||||  |||||||| ||||| || ||||||||| |||||||    
T  19645834 atattaaatgaacaaggctattatagtaaaagtataaagtattgtatatcaaaagtagtaacatctattgattgtcttagtttgtgtaaaatgtcaaaaa 19645735  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  19645734 gtgacaattaaa 19645723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 22784777 - 22784669
Alignment:
Q  6 tattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtg 105  Q
    |||||||||||||| |  ||||||||| |||||||  |||||| ||||||| || || || ||||||| ||||||  ||  |||||||| | ||||||||    
T  22784777 tattaaatgaataaggctattatagtaaaagtatacattattgtatcaaaagtagtatcatttattgaatatcttggtttatgtaaaatgttaaaaagtg 22784678  T
Q  106 acaattaaa 114  Q
    |||||||||    
T  22784677 acaattaaa 22784669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 24635837 - 24635948
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| | |||||| |||||| || | ||| | ||||| ||||||||||||||  || ||||||||| | |||||    
T  24635837 agatattaaatgactaaggctattatagtaaatgtataaattattgtataagaaaaagtaacatttattgattatcttggtttgtgtaaaatgttaaaaa 24635936  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  24635937 gtgacatttaaa 24635948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30388850 - 30388901
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaa 54  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||||||||||    
T  30388850 agatattaaatgaataagatcattatagtaaaagtatagcttattgcatcaa 30388901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 17251366 - 17251256
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaatta-ttgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || ||||| ||| |||||| ||||  || ||||||||| | ||||||    
T  17251366 atattaaattaataaggtcattatagtaaaagtaaaagcaattgtatcaaaagtagtaacacttaattgattgtcttggtttgtgtaaaatgttaaaaag 17251267  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  17251266 tgacaattaaa 17251256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 24949254 - 24949347
Alignment:
Q  21 gtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||| ||||| || | |||| ||||||| || ||||| ||||||||| | ||  || ||||||||||||||||| | |||||||||    
T  24949254 gtcattatagtaaaagtaaaaataattgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaa 24949347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 11431269 - 11431158
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||| | |||||| ||||| ||| |||||||| |||||| ||||||| ||  || |  |||||||| |||| ||| |||||| || | ||||     
T  11431269 agatattaaattagtaaagttattatcgtaaaagtataagttattgtatcaaaagtaggaatagctattgattgtcttgatttgtgtaacatgtaaaaat 11431170  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  11431169 gtgacaattaaa 11431158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 34378988 - 34379099
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |   |||||||| |||||| | |||||| || | ||| | ||||| ||||||| | ||||  || |||||||||||||||||    
T  34378988 agatattaaatgactaaggcttttatagtaaaagtatgaattattgtataagaaaaagtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaa 34379087  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  34379088 gtgacagttaaa 34379099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 52792 - 52834
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataactta 45  Q
    ||||||||||||||||| ||||||||| || ||||||||||||    
T  52792 agatattaaatgaataaggtcattataataaaagtataactta 52834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7235567 - 7235641
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatt 75  Q
    ||||||||||||||||||| || ||||||||| |||||||   ||||| ||||||| || ||| | |||||||||    
T  7235567 tgagatattaaatgaataaggttattatagtaaaagtatattgtattgtatcaaaagtagtaatatttattgatt 7235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 53798 - 53871
Alignment:
Q  42 cttattgca-tcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||| |||||| || ||||||||||||||| ||||  |   ||||||||||||||| ||||||||||||    
T  53798 cttattgcaatcaaaagtagtaacaattattgattgtcttggtatatgtaaaatatcaaaatgtgacaattaaa 53871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 17601211 - 17601134
Alignment:
Q  37 tataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||| |||||| ||||||| ||  |||| ||||||||| ||||| || ||||||||  |||||| ||||||||||||    
T  17601211 tataaattattgtatcaaaagtagcaacatttattgattgtcttagtttgtgtaaaacgtcaaaatgtgacaattaaa 17601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 24356164 - 24356055
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| || || |||||||||||| |||||| |   || | ||||||| || ||||| ||||||||| | ||  || |  ||||||||||||||||    
T  24356164 atattaaatcaacaaggtcattatagtaaaagtattagcaatggtatcaaaagtagtaacatttattgattgttttggtttggataaaatatcaaaaagt 24356065  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  24356064 gacaattaaa 24356055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 30388934 - 30389006
Alignment:
Q  42 cttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||||||||| ||  |||| |||||| ||||  || ||||||||| |||||| |||| |||||||    
T  30388934 cttattgcatcaaaaatagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaa 30389006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 51972391 - 51972278
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| || |||||| |||||||| |||||||| ||||||||| |||||    
T  51972391 tgagatattaaatgaataatatcattatagtaaaagtataacttattgcatcaaaagtagtaacaactattgattgtcttaatttgtgtaaaatgtcaaa 51972292  T
Q  101 aagtgacaattaaa 114  Q
    |||| |||||||||    
T  51972291 aagtaacaattaaa 51972278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29830880 - 29830993
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||| ||||  || ||||||||| |||||    
T  29830880 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattattgattgtcttggtttgtgtaaaatgtcaaa 29830979  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  29830980 atgtgacaattaaa 29830993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30686538 - 30686651
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  30686538 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 30686637  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  30686638 acgtgacaattaaa 30686651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 49497282 - 49497392
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| ||||| || || ||||||||||||| |    
T  49497282 gatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaaataatatcaattgttaattgtcttagtttgtataaaatatcaaaatg 49497381  T
Q  104 tgacaattaaa 114  Q
    | |||||||||    
T  49497382 taacaattaaa 49497392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38648584 - 38648697
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| |||| ||| ||||||||| |||||    
T  38648584 tgagatatcaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaa 38648683  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  38648684 atgtgacaattaaa 38648697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 2059920 - 2059809
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||||||||  || ||||||||||||||||| ||  || ||||||||| ||||||     
T  2059920 agatattaaatgaataaggtcattatagtgaaagtataacttattgcatcaaatgtagtaacaattattgattattttggtttgtgtaaaatgtcaaaat 2059821  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  2059820 gtgacaattaaa 2059809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1429411 - 1429524
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || || || | |||| ||||| || |||||||||||||||    
T  1429411 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcatttgtagattgtcttagtttgtgtaaaatatcaaa 1429510  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  1429511 atgtgacaattaaa 1429524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1677325 - 1677438
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||| ||||||| ||||||| |||||||||| |||| || || |||||||||||| |||| ||| ||||||||| |||||    
T  1677325 tgagatattaaatgaataaggtcaatatagtaaaagtatagcttattgcattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaa 1677424  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  1677425 atgtgacaattaaa 1677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35255613 - 35255726
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||| || |||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||| ||||  ||  |||||||| |||||    
T  35255613 tgagatgttaaatgaacaaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttatgtaaaatgtcaaa 35255712  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  35255713 aagtgacaattaaa 35255726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35483891 - 35483778
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||| | ||  || ||||||||| |||||    
T  35483891 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaaataatatcaattgttgattgttttggtttgtgtaaaatgtcaaa 35483792  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  35483791 atatgacaattaaa 35483778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43500633 - 43500746
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  43500633 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 43500732  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  43500733 atgtgacaattaaa 43500746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45226687 - 45226574
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||| |||||||| || || ||||| |||||| |||||||| || |||||| |||||    
T  45226687 tgagatattaaatgaataaagtcattataataaaagtatagcttattacatcaaaagtagtatcaattgttgattgtcttaatttgtataaaatgtcaaa 45226588  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  45226587 atgtgacaattaaa 45226574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12124771 - 12124884
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  | ||||||||| ||||||||||||||||||||||| ||  | ||||| ||||||||||| ||| |||||||||  ||||    
T  12124771 tgagatattaaatgaataagattattatagtaaaagtataacttattgcatcaaaagtagcatcaattgttgattatcttgatttgtgtaaaatggcaaa 12124870  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  12124871 atgtgacaattaaa 12124884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13507897 - 13508010
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| || || |||||||||||| |||| |||  |||||||| |||||    
T  13507897 tgagatattaaattaataaagtcattatagtaaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaa 13507996  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  13507997 atgtgataattaaa 13508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13515085 - 13515198
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| || || |||||||||||| |||| |||  |||||||| |||||    
T  13515085 tgagatattaaattaataaagtcattatagtaaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaa 13515184  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  13515185 atgtgataattaaa 13515198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13566806 - 13566919
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  13566806 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 13566905  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  13566906 atgtgacaattaaa 13566919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13699301 - 13699414
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| |||||    
T  13699301 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 13699400  T
Q  101 aagtgacaattaaa 114  Q
    |  || ||||||||    
T  13699401 atatggcaattaaa 13699414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19349489 - 19349376
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| ||| |    
T  19349489 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaga 19349390  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  19349389 atgtgacaattaaa 19349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19929576 - 19929463
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||| ||  |||||||||||||| ||||  || ||||||||| | |||    
T  19929576 tgagatgttaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttggtttgtgtaaaatgttaaa 19929477  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  19929476 aaatgacaattaaa 19929463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32994579 - 32994466
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||||| |||||    
T  32994579 tgagatgttaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaa 32994480  T
Q  101 aagtgacaattaaa 114  Q
    ||  ||||||||||    
T  32994479 aaaagacaattaaa 32994466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37437163 - 37437050
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |  || |||||||||||| ||||  || ||||||||| |||||    
T  37437163 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtggtatcaattattgattgtcttggtttgtgtaaaatgtcaaa 37437064  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  37437063 atatgacaattaaa 37437050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 8464365 - 8464254
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  ||  |||||||| ||||||     
T  8464365 agatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaat 8464266  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  8464265 gtgacaattaaa 8464254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 35531402 - 35531292
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||| |    
T  35531402 gatatcaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatg 35531303  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  35531302 tgacaattaaa 35531292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1024683 - 1024796
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| |||||||  |||||||||||||| || || ||||| |||||| | ||  || |||||||||||||||    
T  1024683 tgagatattaaatgaataagatcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaa 1024782  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  1024783 atgtgacaattaaa 1024796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10506938 - 10507051
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |  ||||||||| |||||| | |||||||||||||| || ||| | ||||||||| |||| ||| ||||||||||||| |    
T  10506938 tgagatattaaatgaataaggctattatagtacaagtatcaattattgcatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcaca 10507037  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  10507038 aaatgacaattaaa 10507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10676029 - 10676142
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| ||||| ||||||||||||||||| |||||||||| ||||| ||| || |||  |||||||| |||||    
T  10676029 tgagatattaaataaataaggttattatagtaaaagtacaacttattgcatcaaaagtaataacaatcattgactatattgatttatgtaaaatgtcaaa 10676128  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  10676129 atgtgataattaaa 10676142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20605734 - 20605621
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  20605734 tgagatattaaatgaataaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 20605635  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  20605634 atatgacaattaaa 20605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45368215 - 45368328
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| | ||  || ||||||||| |||||    
T  45368215 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaa 45368314  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  45368315 atgcgacaattaaa 45368328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 50825682 - 50825570
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||| | |||||| ||||  || ||| ||||| |||||    
T  50825682 tgagatgttaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtagcaa-tgttgattgtcttggtttgtgaaaaatgtcaaa 50825584  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  50825583 aagtgacaattaaa 50825570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37609411 - 37609301
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||   | || ||||| |||||| |||| |||  |||||||| |||||    
T  37609411 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaa---agtatcaattgttgattgtcttgatttatgtaaaatgtcaaa 37609315  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  37609314 atgtgacaattaaa 37609301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 12231178 - 12231068
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||| | ||||||||||||||| || || ||||| |||||| ||||  ||  |||||||| |||||| |    
T  12231178 gatattaaatgaataaggtcattatagtaaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatg 12231079  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  12231078 tgacaattaaa 12231068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 21927802 - 21927708
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||| || ||||||||| ||||    
T  21927802 atattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttagtttgtgtaaaatgtcaa 21927708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 52749144 - 52749242
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    |||||||||||||||||  | ||||||||| |||||||  ||||||||||||||||| || ||||| |||||| |||| ||||||||||||| ||||||    
T  52749144 agatattaaatgaataagattattatagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttgattcgtgtaaaatgtcaaaa 52749242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 9127800 - 9127909
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||||| ||||||| | ||||  || ||||||||| |||||||||    
T  9127800 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagt 9127899  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  9127900 gacaattaaa 9127909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28679148 - 28679261
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| || ||  |||| || ||| ||||||||  | |||||| |||||    
T  28679148 tgagatattaaatgaataaggtcattatagtaaaagtataatttattgcatcaaaagtagtataaattgttaattgtcttaatttatataaaatgtcaaa 28679247  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  28679248 atgtgataattaaa 28679261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35700485 - 35700372
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |  ||||||||| |||||| | |||||  ||||||| || ||||| ||||||||| |||| ||| ||||||||||||| |    
T  35700485 tgagatattaaatgaataaggctattatagtaaaagtatcaattattatatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatatcaca 35700386  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  35700385 aaatgacaattaaa 35700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39412621 - 39412508
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| || |||||||||||||||||||| ||  |||||||||||||| | ||  || || |||||| | |||    
T  39412621 tgagatgttaaattaataaggtcattatagtaaaaatataacttattgcatcaaaagtagaaacaattattgattgttttggtttgtataaaatgttaaa 39412522  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  39412521 aagtgacaattaaa 39412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 7783084 - 7783190
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||||||||| |||||||||||| |||||||  | |||||||||||| || || ||||| |||||||||||  || || |||||| |||||| |||||    
T  7783084 ttaaatgaataaggtcattatagtaaaagtatagttaattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatgtcaaaatgtgac 7783183  T
Q  108 aattaaa 114  Q
    |||||||    
T  7783184 aattaaa 7783190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 4101015 - 4100906
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| |||||  ||||||||||| ||||| ||   |||| ||||||| |||||||| ||||||||| ||||| || |||||||||||||||||||    
T  4101015 atattaaattaataagatcattatagtaaaagtaaaaacaattgtatcaaaagtaataacatttattgattgtcttagtttgtgtaaaatatcaaaaagt 4100916  T
Q  105 gacaattaaa 114  Q
     | |||||||    
T  4100915 aataattaaa 4100906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 51974277 - 51974168
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||| | ||||||| | | ||  |||||||||||| |||||||||    
T  51974277 atattaaatgaataaggttattatagtaaaagtatacattattgtatcaaaagtagtaatatttattgaatgttttggttcgtgtaaaatgtcaaaaagt 51974178  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  51974177 gacaattaaa 51974168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 38597720 - 38597831
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| | ||||| ||||||| | ||||| || ||||||||| |||||||    
T  38597720 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaacatttattgagtgtcttagtttgtgtaaaatgtcaaaaa 38597819  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  38597820 gtgacagttaaa 38597831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 40926848 - 40926750
Alignment:
Q  16 ataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| ||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||| | ||  ||  |||||||| |||||| ||||||||||||    
T  40926848 ataaggtcgttatagtaaaagtataacttattgtatcaaaagtagtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaa 40926750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30702400 - 30702287
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||| ||||| ||||| || ||||||||| ||||||||  ||||| ||||||| |  ||||| ||||||||| | ||  || ||||||||| |||||    
T  30702400 tgagataataaataaataatgttattatagtaaaagtataaaatattgtatcaaaagtggtaacatttattgattgtattggtttgtgtaaaatgtcaaa 30702301  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  30702300 aagtgacaattaaa 30702287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48508260 - 48508373
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||| |||| ||||||||||| ||  || || |||||| |||||    
T  48508260 tgagatattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtaacaacatttattgattattttggtttgtataaaatgtcaaa 48508359  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  48508360 atgtgacaattaaa 48508373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 32168418 - 32168309
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||| || || |||||||||||| ||||| ||||  |||| ||||||| || || || ||||||||| ||||  || ||||||||||||||||||    
T  32168418 atattaaattaacaaggtcattatagtaaaagtaataaca-attgtatcaaaagtagtaccatttattgattgtcttggtttgtgtaaaatatcaaaaag 32168320  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  32168319 tgacaattaaa 32168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31487889 - 31487776
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||  || | ||||||||| ||||  || ||||||||| |||||    
T  31487889 tgagatattaaataaataaggttattatagtaaaaatagaaattattgtatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgtcaaa 31487790  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  31487789 atgtgacaattaaa 31487776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 31588842 - 31588737
Alignment:
Q  9 taaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgaca 108  Q
    ||||||||||| ||||| |||||| ||||||| ||||||| ||||||| || ||  |||| |||||||||||  || |||||||||   |||| ||||||    
T  31588842 taaatgaataaggtcatcatagtaaaagtatagcttattgtatcaaaagtagtattaatttttgattatcttggtttgtgtaaaatgctaaaatgtgaca 31588743  T
Q  109 attaaa 114  Q
    ||||||    
T  31588742 attaaa 31588737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 35605729 - 35605838
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||| |  ||||  ||||||| |||||| | ||||||||| | ||  || ||||||||| ||||| |||    
T  35605729 atattaaatgaataaggttattatagtaaaagtatgaagtattatatcaaaattaataatatttattgattgtattggtttgtgtaaaatgtcaaatagt 35605828  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  35605829 gacaattaaa 35605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 43809036 - 43809144
Alignment:
Q  6 tattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtg 105  Q
    |||||||| ||||| |  ||||||||| ||||| || | |||| |||||||  | ||||| ||||||||| ||||||||  |||||||| | ||||||||    
T  43809036 tattaaattaataaggctattatagtaaaagtaaaaataattgtatcaaaagcagtaacacttattgattgtcttaatttatgtaaaatgttaaaaagtg 43809135  T
Q  106 acaattaaa 114  Q
    |||||||||    
T  43809136 acaattaaa 43809144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 43952922 - 43952970
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  43952922 ttaaatgaataaggtcattatagtaaaagtataacttattacatcaaaa 43952970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46096673 - 46096785
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  | ||| ||||| |||||| |  ||||| ||||||| || ||| | ||||||||| | || ||  || ||||||||||||    
T  46096673 tgagatattaaatgaataagattattgtagtaaaagtatgaaatattgtatcaaaagtagtaatatttattgattgtattgatgtgtataaaatatcaaa 46096772  T
Q  101 aagtgacaattaa 113  Q
    |||||||||||||    
T  46096773 aagtgacaattaa 46096785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1428534 - 1428645
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||||| |||||| || | ||| ||||||| |||||   ||||||| || ||||||||| |||||||    
T  1428534 agatattaaatgactaaggctattatagtaaaagtataaattattgtataagaaaaaataacatttattaggtatcttagtttgtgtaaaatgtcaaaaa 1428633  T
Q  103 gtgacaattaaa 114  Q
     ||||| |||||    
T  1428634 atgacagttaaa 1428645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 9362102 - 9362213
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| | ||| | ||||||| | |||| ||| || |||||| |||||||    
T  9362102 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaaaatttattgagtgtcttgatttgtataaaatgtcaaaaa 9362201  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  9362202 gtgacagttaaa 9362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 15660737 - 15660832
Alignment:
Q  24 attatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaataggt 119  Q
    ||||||||| |||||||| |||||| || | ||| ||||||| ||||||| | ||||  || ||||||||||||||||||||| | ||||| ||||    
T  15660737 attatagtaaaagtataaattattgtataagaaaaaataacatttattgagtgtcttggtttgtgtaaaatatcaaaaagtgatagttaaaaaggt 15660832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44818581 - 44818636
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    ||||||||||||||||||| ||||||| |||| || |||| |||||||||||||||    
T  44818581 tgagatattaaatgaataaggtcattacagtaaaactatagcttattgcatcaaaa 44818636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 52649797 - 52649726
Alignment:
Q  43 ttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||| ||||||| || ||||| ||||||||| |||| ||| ||| ||||| |||||||||||||||||||    
T  52649797 ttattgtatcaaaagtagtaacatttattgattgtcttgattagtgaaaaatgtcaaaaagtgacaattaaa 52649726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49908292 - 49908176
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataac---ttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatc 97  Q
    ||||||||  ||| ||||| |||||||||||| || |||||    |||||||||||||| || || ||||| |||||| ||||| ||||| |||||| ||    
T  49908292 tgagatatcgaattaataaggtcattatagtaaaaatataatagtttattgcatcaaaagtagtatcaattgttgattgtcttagttcgtataaaatgtc 49908193  T
Q  98 aaaaagtgacaattaaa 114  Q
    |||| |||| |||||||    
T  49908192 aaaatgtgataattaaa 49908176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 51613542 - 51613651
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||| || || |||||||||||| ||||| ||||  |||| ||||||| || || || ||||||||| ||||  || ||||||||||| ||||||    
T  51613542 atattaaattaacaaggtcattatagtaaaagtaataaca-attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaaaatataaaaaag 51613640  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  51613641 tgacaattaaa 51613651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18344453 - 18344566
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||| ||||  ||||| || ||||||||| ||||||||  ||||| ||||||| |  ||| | ||||| ||||| || ||| ||||||||| | |||    
T  18344453 tgagataataaacaaataaggttattatagtaaaagtataaagtattgtatcaaaagtggtaatatttattaattatattgatttgtgtaaaatgttaaa 18344552  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  18344553 aagtgacaattaaa 18344566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32348105 - 32348217
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||| ||||| |||||| |  ||||| ||||||| || ||| | ||||||||| | ||  || ||||||||| || ||    
T  32348105 tgagatattaaatgaataaggttattctagtaaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtc-aa 32348203  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  32348204 aagtgacaattaaa 32348217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18033936 - 18033880
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagt-agaagtataacttattgcatcaaaa 56  Q
    ||||||||||||||||||| ||||||||||| | || |||| |||||||||||||||    
T  18033936 tgagatattaaatgaataaggtcattatagtaaaaaatatagcttattgcatcaaaa 18033880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 36850813 - 36850877
Alignment:
Q  50 atcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||| || ||||| ||||||| | |||| ||| ||||||||||||||||| |||||||||||    
T  36850813 atcaaaagtagtaacatttattgactgtcttgatttgtgtaaaatatcaaaaaatgacaattaaa 36850877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 48174730 - 48174670
Alignment:
Q  54 aaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||| || || ||||||||| |||| ||| ||||||||||||||||||||| |||||||    
T  48174730 aaaatagtatcatttattgattgtcttgatttgtgtaaaatatcaaaaagtgataattaaa 48174670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 5598216 - 5598285
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||||||| || ||| ||||||||||| ||||  || ||||||||| ||||||  |||||||||||    
T  5598216 attgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaa 5598285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 33720688 - 33720757
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| |||||||||| || || |||||||| |||||  || |||||||||||||||| || |||||||||    
T  33720688 attgtatcaaaaatagtatcatttattgataatcttggtttgtgtaaaatatcaaaatgtaacaattaaa 33720757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 44182894 - 44182998
Alignment:
Q  9 taaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgaca 108  Q
    ||||| ||||| |||||||||||| ||||||| ||||||  ||| ||| ||||| ||||| |||||| ||||  || |||||||||   |||| ||||||    
T  44182894 taaataaataaggtcattatagtaaaagtatatcttattatatc-aaagtaatatcaatttttgattgtcttggtttgtgtaaaatgctaaaatgtgaca 44182992  T
Q  109 attaaa 114  Q
    ||||||    
T  44182993 attaaa 44182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 8453347 - 8453236
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| ||||||||| || |||||||| |||||||||||||| || ||||||||||||||||||||| || ||||||||| ||||||     
T  8453347 agatattaaatgaataatgtcattataataaaagtataatttattgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaat 8453248  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  8453247 gtgacaattaaa 8453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 15596473 - 15596584
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||| ||||||     
T  15596473 agatattaaatgaataaggttattatagtaaaagtataacttattgcataaaaagtaataacaattattgattatcttggtttgtgtaaaatgtcaaaat 15596572  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  15596573 gtgacaattaaa 15596584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14263671 - 14263784
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||  || ||||||||| |||||    
T  14263671 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 14263770  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  14263771 atgtgacaattaaa 14263784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 1202555 - 1202444
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||| |||||| |||| ||| ||||||||| | ||||     
T  1202555 agatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaat 1202456  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  1202455 gtgacaattaaa 1202444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 43642100 - 43641989
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||| ||||| |||||| |||||||||||| |||||||| |||||||||||||| || ||||||||||||||| ||||| || ||||||||| |||||||    
T  43642100 agatgttaaaagaataaggtcattatagtaaaagtataatttattgcatcaaaagtagtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaa 43642001  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  43642000 gtgacaattaaa 43641989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 1245446 - 1245552
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||||||| || ||||||||||||||| |||| |||  |||||||| ||||||||||||    
T  1245446 ttaaatgaataaggtcattatagtaaaagtataacttattgaatcaaaagtagtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgac 1245545  T
Q  108 aattaaa 114  Q
    |||||||    
T  1245546 aattaaa 1245552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 18291594 - 18291703
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| ||||| |||||| |||  |||||||| |||||| ||    
T  18291594 atattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttgatttttgtaaaatgtcaaaatgt 18291693  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  18291694 gacaattaaa 18291703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26062834 - 26062947
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| || || ||||| ||||||||||| ||| ||||||||| |||||    
T  26062834 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaa 26062933  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  26062934 atgtgacaattaaa 26062947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38482905 - 38482792
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  38482905 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 38482806  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  38482805 atgtgacaattaaa 38482792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10180497 - 10180610
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| |||||| |||  |||||||| |||||    
T  10180497 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttgatttatgtaaaatgtcaaa 10180596  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  10180597 atatgacaattaaa 10180610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33935173 - 33935060
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| || || |||||||||||| ||||  || ||||||||| |||||    
T  33935173 tgagatattaaatgaataaggtcattatagtaaaattatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaa 33935074  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33935073 atgtgacaattaaa 33935060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35052180 - 35052293
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| ||||  || ||||||||| |||||    
T  35052180 tgagatattaaataaataaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 35052279  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  35052280 atgtgacaattaaa 35052293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34046978 - 34047096
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||| || ||||| |||||  ||||  || ||||||||| |||||    
T  34046978 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgatattcttggtttgtgtaaaatgtcaaa 34047077  T
Q  101 aagtgacaattaaataggt 119  Q
    | |||||||||||| ||||    
T  34047078 atgtgacaattaaaaaggt 34047096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 39303627 - 39303521
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| |||| ||| ||||||||| ||||||     
T  39303627 agatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaat 39303528  T
Q  103 gtgacaa 109  Q
    |||||||    
T  39303527 gtgacaa 39303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11994012 - 11994121
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| || ||| |||| ||| ||||||||| |||||| ||    
T  11994012 atattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgtttattgtcttgatttgtgtaaaatgtcaaaatgt 11994111  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  11994112 gacaattaaa 11994121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12342727 - 12342614
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| |||||    
T  12342727 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 12342628  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  12342627 atatgacaattaaa 12342614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23430036 - 23430149
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| |||| ||| ||||||||| | |||    
T  23430036 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaa 23430135  T
Q  101 aagtgacaattaaa 114  Q
    | ||||| ||||||    
T  23430136 atgtgacgattaaa 23430149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34981956 - 34982069
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || ||  |||| |||||| | ||  || |||||||||||||||    
T  34981956 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtattaattgttgattgttttggtttgtgtaaaatatcaaa 34982055  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  34982056 atgtgacaattaaa 34982069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36058359 - 36058472
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||| ||||||  |||||||| |||||    
T  36058359 tgagatattaaatgaataagatcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactattttaatttatgtaaaatgtcaaa 36058458  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  36058459 atgcgacaattaaa 36058472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 2456224 - 2456115
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||| || |||  |||||||| |||||| ||    
T  2456224 atattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatattgatttatgtaaaatgtcaaaatgt 2456125  T
Q  105 gacaattaaa 114  Q
    ||| ||||||    
T  2456124 gacgattaaa 2456115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9954776 - 9954889
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||  ||  |||||||| | |||    
T  9954776 tgagatattaaatgaataaggtcattatggtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgttaaa 9954875  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  9954876 atatgacaattaaa 9954889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18842656 - 18842769
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| || ||||| |||||||||||||| ||| ||||||||| |||||    
T  18842656 tgagatattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagtaacatttattgattatcttgatttgtgtaaaatgtcaaa 18842755  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  18842756 atgtgacaattaaa 18842769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32010197 - 32010084
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||| || |||||||||||| |||||||| |||||||||||||| || || |||||||||||| ||||  || ||| ||||| | |||    
T  32010197 tgagatgttaaatgaacaaggtcattatagtaaaagtataaattattgcatcaaaagtagtagcaattattgattgtcttggtttgtgaaaaatgttaaa 32010098  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  32010097 aagtgacaattaaa 32010084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33314671 - 33314784
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||| ||||||| ||||| ||| ||  ||  |||||||| |||||    
T  33314671 tgagatattaaatgaataaagtcattatagtaaaaggacaacttattgcataaaaaatagtaacaatcattgactatattggtttatgtaaaatgtcaaa 33314770  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  33314771 atgcgacaattaaa 33314784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38128660 - 38128547
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || || |||||| |||||    
T  38128660 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtataaaatgtcaaa 38128561  T
Q  101 aagtgacaattaaa 114  Q
    | || |||||||||    
T  38128560 atgtaacaattaaa 38128547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 40228426 - 40228535
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||| | |||||||||||||||||| || ||||| |||||| ||||  || ||||||||  |||||| ||    
T  40228426 atattaaatgaataaggtcattatagtaaaagtacagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaacgtcaaaatgt 40228525  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  40228526 gacaattaaa 40228535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 45281488 - 45281378
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| || ||||||||| |||||||  |||||||||||||| || || ||||| |||||||||||  || ||||||||| | |||| |    
T  45281488 gatattaaatgaataaggtgattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgttaaaatg 45281389  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  45281388 tgacaattaaa 45281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 8672629 - 8672734
Alignment:
Q  9 taaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgaca 108  Q
    ||||| ||||| |||||||||||| ||||| ||   |||| |||||||||||||||| ||||||||||| ||  || ||||||||||||||||| |||||    
T  8672629 taaataaataaggtcattatagtaaaagtaaaaacaattgtatcaaaaataataacatttattgattattttggtttgtgtaaaatatcaaaaaatgaca 8672728  T
Q  109 attaaa 114  Q
    ||||||    
T  8672729 attaaa 8672734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14228431 - 14228322
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| |||||  |||||||| || || ||||| |||||| ||||  || ||||||||| |||||| ||    
T  14228431 atattaaatgaataaggtcattatagtaaaagtatagcttatgacatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 14228332  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  14228331 gacaattaaa 14228322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21651859 - 21651746
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||||||||||||| || |||| || ||||  ||||||  ||  |||||||| |||||    
T  21651859 tgagatattaaatgaataaggtcattatagtaaaagtacaagttattgcatcaaaagtagtaacgatcattggctatcttggtttatgtaaaatgtcaaa 21651760  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  21651759 atgtgacaattaaa 21651746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 25703687 - 25703578
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||||| |||| || ||  |||| |||||||||||  || ||||||||| |||||| ||    
T  25703687 atattaaatgaataagatcattatagtaaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgt 25703588  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  25703587 gacaattaaa 25703578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 25812858 - 25812749
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||||| |||| || ||  |||| |||||||||||  || ||||||||| |||||| ||    
T  25812858 atattaaatgaataagttcattatagtaaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgt 25812759  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  25812758 gacaattaaa 25812749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 41308024 - 41308136
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgc-atcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| || ||||||||||| ||| ||||  |   |||||||| ||||||    
T  41308024 agatattaaatgaataaggtcattatagtaaaagtataacttattgcaatcaaaagtagtaacaattattaattgtcttggtatatgtaaaatgtcaaaa 41308123  T
Q  102 agtgacaattaaa 114  Q
      |||||||||||    
T  41308124 tatgacaattaaa 41308136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 16656829 - 16656940
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||  ||||||||||| |||||||  |||||||||||||| || || ||||| |||| | ||||  || ||||||||| ||||||     
T  16656829 agatattaaatgaataagttcattatagtaaaagtatagtttattgcatcaaaattagtatcaattgttgagtgtcttggtttgtgtaaaatgtcaaaat 16656928  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  16656929 gtgacaattaaa 16656940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 23848667 - 23848556
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| ||||||||| || || ||||  |||||||||||||| || || |||||||||||| ||||  || |||| |||| ||||||     
T  23848667 agatattaaatgaataaggtcattataataaaaatatagtttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtcaaatgtcaaaat 23848568  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  23848567 gtgacaattaaa 23848556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14061258 - 14061149
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||| |||||  ||||||||| |||||||| |||||| ||||||| || ||| | ||||||||| ||||  || ||||||||| | |||||||    
T  14061258 atattaaatgactaaagctattatagtaaaagtataaattattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgttaaaaagt 14061159  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  14061158 gacaattaaa 14061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14511539 - 14511430
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| |||||||||| ||||| ||||| ||| ||||  || ||||||||| |||||||||    
T  14511539 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaaatagtaacatttattaattgtcttggtttgtgtaaaatttcaaaaagt 14511440  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  14511439 gacaattaaa 14511430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3513484 - 3513560
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattat 77  Q
    ||||||||||||||||||| |||||||||||| | ||||| ||||||| ||||||| ||||| ||||| ||||||||    
T  3513484 tgagatattaaatgaataaggtcattatagtaaatgtatagcttattgtatcaaaagtaatatcaatttttgattat 3513560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9808087 - 9808007
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctta 81  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||| || ||  |||| || |||||||||    
T  9808087 tgagatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtattaattgttaattatctta 9808007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15623722 - 15623666
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaata 59  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  15623722 agatattaaatgaataatgtcattatagtaaaagtataacttattacatcaaaaata 15623666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15647510 - 15647454
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaata 59  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  15647510 agatattaaatgaataatgtcattatagtaaaagtataacttattacatcaaaaata 15647454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 17313282 - 17313382
Alignment:
Q  14 gaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaa 113  Q
    |||||| |||||||||||| ||||| ||||||||||||||||| |||||||||| ||||| ||||||  ||  ||||| || |||||| || ||||||||    
T  17313282 gaataaggtcattatagtaaaagtagaacttattgcatcaaaagtaataacaataattgactatcttcgtttatgtaagatgtcaaaatgtaacaattaa 17313381  T
Q  114 a 114  Q
    |    
T  17313382 a 17313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 7606010 - 7605919
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaat 94  Q
    |||| |||||| |||||  ||||||||||| |||||||||||||||||| |||| ||||||  |||||||||| |||| ||| |||||||||    
T  7606010 agatgttaaataaataagatcattatagtaaaagtataacttattgcattaaaagtaataatgattattgattgtcttgatttgtgtaaaat 7605919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12763561 - 12763655
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaata 95  Q
    ||||||||||||||||||| |  ||||||||| |||||| | |||||| |||||||| | ||||| ||||||||| |||||||| ||| ||||||    
T  12763561 tgagatattaaatgaataatgatattatagtaaaagtatcaattattgtatcaaaaacagtaacatttattgattgtcttaatttgtgcaaaata 12763655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4057415 - 4057528
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| |||||  ||||||||||| ||||||| ||||| |||| |||| || || ||||| || ||| ||||  || ||||||||| |||||    
T  4057415 tgagatattaaattaataagatcattatagtaaaagtatagcttatggcataaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaa 4057514  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  4057515 atgtgacaattaaa 4057528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12248879 - 12248770
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||| | ||||||| | ||||  |||||||||||| ||||||| |    
T  12248879 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcgtgtaaaatgtcaaaaact 12248780  T
Q  105 gacaattaaa 114  Q
    | ||||||||    
T  12248779 gtcaattaaa 12248770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 13328121 - 13328210
Alignment:
Q  25 ttatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||||| ||||||||||||||| || |||| || || ||||| |||||| ||||| || ||||||||| |||||| ||||||||||||    
T  13328121 ttatagtaaaagtataacttattgtattaaaagtagtatcaatttttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaa 13328210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27518826 - 27518713
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||||||||||||||||  |||| |||||||||||| |||| || ||||||| ||||| ||| ||  ||  |||||||| |||||    
T  27518826 tgagatattaaataaataaagtcattatagtaacagtacaacttattgcataaaaagtagtaacaatcattgactatattggtttatgtaaaatgtcaaa 27518727  T
Q  101 aagtgacaattaaa 114  Q
    | || || ||||||    
T  27518726 atgtaactattaaa 27518713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 9687625 - 9687522
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| | ||||| ||||||  |||||| ||| ||||||||| |||||||    
T  9687625 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaacatttattgcgtatcttgatttgtgtaaaatgtcaaaaa 9687526  T
Q  103 gtga 106  Q
    ||||    
T  9687525 gtga 9687522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17074695 - 17074582
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||||||||||| ||  || | ||||||||| ||||  || ||||||||| | |||    
T  17074695 tgagatattaaataaataaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaa 17074596  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  17074595 atgtgacaattaaa 17074582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17573575 - 17573688
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||||||||||| ||  || | ||||||||| ||||  || ||||||||| | |||    
T  17573575 tgagatattaaataaataaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaa 17573674  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  17573675 atgtgacaattaaa 17573688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26740246 - 26740137
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |  ||||||||| ||||| ||   |||| ||||||| || ||||| ||||||||| ||||  || ||||||||| |||||||||    
T  26740246 atattaaattaataaggctattatagtaaaagtaaaaacaattgtatcaaaagtagtaacacttattgattgtcttggtttgtgtaaaatgtcaaaaagt 26740147  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  26740146 gacaattaaa 26740137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39615565 - 39615453
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||| ||| |||||| ||| ||||  ||  ||||||||||||||    
T  39615565 tgagatattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtaacaac-attattaattgtcttggtttatgtaaaatatcaaa 39615467  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  39615466 atgtgacaattaaa 39615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 43553170 - 43553279
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |  ||||||||| |||||| | |||||| ||||||| || ||||| ||||||||| ||||  || | ||||||| ||| ||||     
T  43553170 atattaaatgaataaggatattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttgcgtaaaatgtcacaaagc 43553269  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  43553270 gacaattaaa 43553279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 7483871 - 7483982
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||| | |||||| || | ||| | ||||| ||||| | | ||||| || |||||||||||||||||    
T  7483871 agatattaaatgactaaggctattatagtaaaagtatgaattattgtataagaaaaagtaacatttatttagtgtcttagtttgtgtaaaatatcaaaaa 7483970  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  7483971 gtgacagttaaa 7483982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 35296173 - 35296284
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||  | |||||| || | ||| ||||||| ||||||| | ||||  || |||||||||||||||||    
T  35296173 agatattaaatgattaaggctattatagtaaaagtactaattattgtataagaaaaaataacatttattgagtgtcttggtttgtgtaaaatatcaaaaa 35296272  T
Q  103 gtgacaattaaa 114  Q
    |||||| |||||    
T  35296273 gtgacagttaaa 35296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 11707596 - 11707558
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataa 41  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  11707596 agatattaaatgaataaagtcattatagtaaaagtataa 11707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2888581 - 2888468
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || |||| |||| || || || |||||| ||||||| ||  |||| ||||||||| ||||  || ||||||||| | |||    
T  2888581 tgagatattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaa 2888482  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  2888481 atgtgacaattaaa 2888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 11707539 - 11707454
Alignment:
Q  29 agtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||| |||||||||||| | |||||||| || ||| ||||||||||| ||||||||  |||||||| | ||||  |||||||||||    
T  11707539 agtaaaagtataacttaatacatcaaaagtagtaataattattgattgtcttaatttatgtaaaatgtaaaaatatgacaattaaa 11707454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23855684 - 23855797
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| |||||| || ||||| ||||||| || ||| | ||||||||| | ||  ||  |||||||| |||||    
T  23855684 tgagatattaaataaataaggttattatagtaaaagtatgacgtattgtatcaaaagtagtaatatttattgattgtattggtttatgtaaaatgtcaaa 23855783  T
Q  101 aagtgacaattaaa 114  Q
    || |||| ||||||    
T  23855784 aaatgacgattaaa 23855797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 40603960 - 40603871
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaat 94  Q
    ||||||||||||||| ||||| |||||| |||| ||  ||||| ||||||||||| || ||||| |||||| |||| ||| || ||||||    
T  40603960 atattaaatgaataaggtcatcatagtaaaagtttagtttattacatcaaaaatagtatcaattgttgattgtcttgatttgtataaaat 40603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23793384 - 23793271
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatta----tcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||| ||||| |||||||||||| ||||| || | |||| |||||||||| ||||| ||||| ||||    ||||  || ||||||||| | |||    
T  23793384 atattaaattaataaggtcattatagtaaaagtaaaaataattgtatcaaaaatagtaacatttatttattaattgtcttggtttgtgtaaaatgttaaa 23793285  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  23793284 aaatgacaattaaa 23793271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 31964729 - 31964809
Alignment:
Q  34 aagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    |||||| | |||||| |||||||||| ||||| ||||||||| ||||  || ||||||||| ||| ||| |||||||||||    
T  31964729 aagtatcaattattgtatcaaaaatagtaacatttattgattgtcttggtttgtgtaaaatgtcataaaatgacaattaaa 31964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 17718634 - 17718709
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    ||||||||| ||||| | |||||||||| ||||| ||   |||| |||||||||| ||||||||||||||| ||||    
T  17718634 atattaaattaataaggccattatagtaaaagtaaaaacaattgtatcaaaaatagtaacaattattgattgtctt 17718709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 29091132 - 29091085
Alignment:
Q  67 ttattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||| |||| ||| ||||||||| |||||||||||||||||||    
T  29091132 ttattgattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaa 29091085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 6757535 - 6757640
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| |||    ||||||||| |||||||| |||||  || | ||| | ||||| ||||||| | |||| ||| ||||||||| |||||||    
T  6757535 agatattaaatgactaagactattatagtaaaagtataaattattatataagaaaaagtaacatttattgagtgtcttgatttgtgtaaaatgtcaaaaa 6757634  T
Q  103 gtgaca 108  Q
    ||||||    
T  6757635 gtgaca 6757640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 35029677 - 35029786
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||| |  ||||| ||||||| || | | | |||| |||||| || ||| || |||||| | ||||| |    
T  35029677 atattaaatgaataaggttattatagtaaaagtatgaagtattgtatcaaaagtagtgatatttatggattatattgatttgtataaaatgttaaaaaat 35029776  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  35029777 gacaattaaa 35029786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 38221941 - 38222045
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||||| |||||  || | ||| ||||||| ||||||| | ||||  || ||||||| | |||||||    
T  38221941 agatattaaatgactaaggctattatagtaaaagtataaattattatataagaaaaaataacatttattgaatgtcttggtttgtgtaaagtgtcaaaaa 38222040  T
Q  103 gtgac 107  Q
    |||||    
T  38222041 gtgac 38222045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 44360562 - 44360673
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| || ||||||||||||||| ||||  || ||||||||| ||||||     
T  44360562 agatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaat 44360661  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  44360662 gtgacaattaaa 44360673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 479089 - 478976
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || |||||||||||||||||  || ||||||||| | |||    
T  479089 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgttaaa 478990  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  478989 atgtgacaattaaa 478976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19594477 - 19594590
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| ||||| ||||| |||||||||||  || ||||||||| |||||    
T  19594477 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaattgttgattatctttgtttgtgtaaaatgtcaaa 19594576  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  19594577 atgtgacaattaaa 19594590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 36404957 - 36404844
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||  ||| ||||||||||||||    
T  36404957 tgagatattaaatgaataaggttattatagtaaaaatataacttattgcatcaaaagtagtaacaatcattgactatcttggttcatgtaaaatatcaaa 36404858  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  36404857 atgtgacaattaaa 36404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14308520 - 14308633
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  14308520 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 14308619  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  14308620 atgtgacaattaaa 14308633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15183117 - 15183004
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||||||  || ||||||||| |||||    
T  15183117 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaa 15183018  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  15183017 atgtgacaattaaa 15183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15893696 - 15893583
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  15893696 tgagatattaaatgaataaggttattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 15893597  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  15893596 atgtgacaattaaa 15893583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26342707 - 26342820
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  26342707 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 26342806  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  26342807 acgtgacaattaaa 26342820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34357305 - 34357418
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| ||  |||| |||||||||||  || ||||||||| || ||    
T  34357305 tgagatattaaatgaataaggtcattatagtaaaaatataacttattgcatcaaaaatagtataaattgttgattatcttggtttgtgtaaaatgtcgaa 34357404  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  34357405 atgtgacaattaaa 34357418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38186168 - 38186059
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || ||||  ||||| |||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  38186168 tgagatattaaatgaataaggtcattatagtaaaaatatagtttattacatcaaaaataatatcaattgttgattgtcttagtttgtgtaaaatatcaaa 38186069  T
Q  101 aagtgacaat 110  Q
    | ||||||||    
T  38186068 atgtgacaat 38186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14288558 - 14288669
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||| || || |||||||||||| ||||  || || ||||||||||||    
T  14288558 tgagatattaaatgaataaggtcattatagtaaaagtatagcttattgcataaaaagtagtatcaattattgattgtctt--tttgtataaaatatcaaa 14288655  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  14288656 atgtgacaattaaa 14288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37093577 - 37093694
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| || ||| ||||  || ||||||||| |||||    
T  37093577 tgagatattaaatgaataa-gtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaa 37093675  T
Q  101 aagtgacaattaaataggt 119  Q
    | |||||||||||| ||||    
T  37093676 atgtgacaattaaaaaggt 37093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3363711 - 3363824
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||| || || |||||||||||| ||||  || ||||||||| |||||    
T  3363711 tgagatattaaatcaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaa 3363810  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  3363811 atgcgacaattaaa 3363824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10812326 - 10812439
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  10812326 tgagatattaaatgaataaggtcattatagtaaaagtatagcttatggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 10812425  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  10812426 atgtgacaattaaa 10812439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11222432 - 11222319
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| |||||    
T  11222432 tgagatattaaatgaataaggtcattatattaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 11222333  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  11222332 atgtgacaattaaa 11222319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13965734 - 13965847
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||| || |||||||||||| ||| ||||||||||| ||||||  ||| |||||||||||||| ||||  || ||||||||| |||||    
T  13965734 tgagatgttaaatgaacaaggtcattatagtaaaagcataacttattggatcaaatgtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaa 13965833  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  13965834 aagtgacaattaaa 13965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14295869 - 14295760
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||| ||    
T  14295869 atattaaatgaataaggtcattatagtaaaagtataccttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 14295770  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  14295769 gacaattaaa 14295760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4883730 - 4883843
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||| || ||||||| ||||  ||| ||| ||  |||||||| |||||    
T  4883730 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattacatcaaaagtagtaacaatcattggctatattagtttatgtaaaatgtcaaa 4883829  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  4883830 atgtgacaattaaa 4883843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36375700 - 36375813
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||  || || ||||| |||||| ||||  || ||||||||| |||||    
T  36375700 tgagatattaaatgaataaggtcattatagtaaaattatagcttattgcatcaaaggtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 36375799  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  36375800 atgtgacaattaaa 36375813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 30264714 - 30264605
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| |||||||  |||||||||||||| || || ||||| |||||| ||||  ||  |||||||| |||||| ||    
T  30264714 atattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgt 30264615  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  30264614 gacaattaaa 30264605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34399329 - 34399442
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||||| || || ||||| |||||| ||||  || ||||||| | |||||    
T  34399329 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaagtgtcaaa 34399428  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  34399429 atgtgataattaaa 34399442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41885752 - 41885861
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||| |||| ||||| | ||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  41885752 tgagatattaaatgaataaggtcattacagtaaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 41885851  T
Q  101 aagtgacaat 110  Q
    | ||||||||    
T  41885852 atgtgacaat 41885861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28145688 - 28145574
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgt--aaaatatca 98  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| |||| |||  | |  |||||||||    
T  28145688 tgagatattaaatgaataatgtcattatagta-aagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttatataaaaaatatca 28145590  T
Q  99 aaaagtgacaattaaa 114  Q
    ||| ||||||||||||    
T  28145589 aaatgtgacaattaaa 28145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3376393 - 3376280
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || |||||| || || |||| ||||||  || |||| || || |||||||||||| |||| ||| ||||||||| |||||    
T  3376393 tgagatattaaatgaataatgttattataataaaaatatagcttattatattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaa 3376294  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  3376293 atgtgacaattaaa 3376280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4654846 - 4654959
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||  | ||||||||||||||||| || ||||||| ||||| ||| ||  ||  |||||||| |||||    
T  4654846 tgagatattaaatgaataaggtcattatagtaaaaacacaacttattgcatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaa 4654945  T
Q  101 aagtgacaattaaa 114  Q
    | | ||||||||||    
T  4654946 atgagacaattaaa 4654959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25558302 - 25558193
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||| || ||||||| ||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  25558302 tgagatattaaatgaataaggtcattatagtaaaagtctagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgtcaaa 25558203  T
Q  101 aagtgacaat 110  Q
    | || |||||    
T  25558202 atgtaacaat 25558193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10263884 - 10263993
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||||| || || ||||| ||| || ||||  || ||||||||| |||||    
T  10263884 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaatt-ttggttgtcttggtttgtgtaaaatgtcaaa 10263982  T
Q  101 aagtgacaatt 111  Q
    |  ||||||||    
T  10263983 atatgacaatt 10263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9706914 - 9707027
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||| |||||||||| || ||||||||| |||||| |  ||||| ||||||| || ||| | ||||||||| | ||  || ||||||||| |||||    
T  9706914 tgagatatcaaatgaataaggttattatagtaaaagtatgaaatattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtcaaa 9707013  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  9707014 aagtgacaattaaa 9707027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11560163 - 11560050
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  | ||||||||| ||||| | |||||| |||||||| ||||| ||||| |||||| ||||  ||  |||||||| |||||    
T  11560163 tgagatattaaatgaataagataattatagtaaaagtacagcttattacatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaa 11560064  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  11560063 atgtgataattaaa 11560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 13001027 - 13000914
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| |  ||||||| | || ||| | |||||| ||||||| || ||||| ||||||||| |||||||| ||||||||| ||| |    
T  13001027 tgagatattaaataaataaggctattatagcaaaaatattaattattgtatcaaaagtagtaacatttattgattgtcttaatttgtgtaaaatgtcaca 13000928  T
Q  101 aagtgacaattaaa 114  Q
    |||| |||||||||    
T  13000927 aagtaacaattaaa 13000914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36824518 - 36824599
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaa 82  Q
    ||||||||||||| |||||  |||||| |||| ||||  |||||||||||| ||||||| ||||||||||||| ||||||||    
T  36824518 tgagatattaaataaataagatcattacagtaaaagtgcaacttattgcattaaaaatagtaacaattattgactatcttaa 36824599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 15677404 - 15677352
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  15677404 gatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaa 15677352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14541458 - 14541571
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |  ||| | ||||||| || ||| | ||||||||| | ||  || || |||||| |||||    
T  14541458 tgagatattaaatgaataaggttattatagtaaaagtatgaagtatcgtatcaaaagtagtaatatttattgattgtattggtttgtataaaatgtcaaa 14541557  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  14541558 aagtgacaattaaa 14541571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 34884648 - 34884547
Alignment:
Q  7 attaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtga 106  Q
    ||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || ||| | ||||||||||||||  || ||||||||| |||||||||||    
T  34884648 attaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaagtagtaatatttattgattatcttggtttgtgtaaaatgtcaaaaagtga 34884549  T
Q  107 ca 108  Q
    ||    
T  34884548 ca 34884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 35158459 - 35158354
Alignment:
Q  9 taaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgaca 108  Q
    ||||||||||| || |||| |||| |||||||  |||||| ||||||| || ||| | ||||||| | ||||  ||| |||||||| |||||||||||||    
T  35158459 taaatgaataaggttattacagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcatgtaaaatgtcaaaaagtgaca 35158360  T
Q  109 attaaa 114  Q
    ||||||    
T  35158359 attaaa 35158354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 13754086 - 13754195
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||||||||| |  ||||||||| ||||| ||| |||||| ||||||| || ||||| ||| ||||| ||||  || ||||||||| || |||||    
T  13754086 atattaaatgaataaggctattatagtaaaagtagtaaattattgtatcaaaagtagtaacatttaatgattgtcttggtttgtgtaaaatgtc-aaaag 13754184  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  13754185 tgacaattaaa 13754195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 32854892 - 32854785
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| | |||| ||||| ||||| ||   |||| ||||||| |||||||| ||||||||||||||| ||  |||||||| | |||||||    
T  32854892 atattaaattaataaggccattgtagtaaaagtaaaaacaattgtatcaaaagtaataacatttattgattatcttagtt--tgtaaaatgttaaaaagt 32854795  T
Q  105 gacaattaaa 114  Q
    |||| |||||    
T  32854794 gacagttaaa 32854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 9370105 - 9370214
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| ||   |||| ||||||| || ||||| ||||| ||  ||||  ||  |||||||| |||||||||    
T  9370105 atattaaattaataaggtcattatagtaaaagtaaaaacaattgtatcaaaagtagtaacacttattaatggtcttggtttatgtaaaatgtcaaaaagt 9370204  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  9370205 gacaattaaa 9370214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 31025054 - 31024943
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| |  ||||||||| |||||| | |||||| || | ||| | ||||| ||||||| | ||||  || |||||||||||||||||    
T  31025054 agatattaaatgactaaggctattatagtaaaagtatgaattattgtataagaaaaagtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaa 31024955  T
Q  103 gtgacaattaaa 114  Q
    || ||| |||||    
T  31024954 gttacagttaaa 31024943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 34262915 - 34262825
Alignment:
Q  24 attatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||| || ||||  |||||  ||||||| || ||||||||||||| | ||||  || ||||||||||| ||||| |||||||||||    
T  34262915 attatagtaaaaatatatattattatatcaaaagtagtaacaattattgaatgtcttggtttgtgtaaaatataaaaaattgacaattaaa 34262825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 43077423 - 43077532
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||| ||||| | || ||||||| ||||| ||||  |||| ||||||| |||||||| ||||||||| ||||  || ||||||||| | |||||     
T  43077423 atattaaattaataaggccaatatagtaaaagtaataaca-attgtatcaaaagtaataacacttattgattgtcttggtttgtgtaaaatgttaaaaaa 43077521  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  43077522 tgacaattaaa 43077532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 1259724 - 1259632
Alignment:
Q  22 tcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||| ||| || ||||  ||||||| |||||| || || ||||| |||||| ||||  || |||||||||||||||| || |||||||||    
T  1259724 tcattatggtaaaattatagtttattgcgtcaaaagtagtatcaattgttgattctcttggtttgtgtaaaatatcaaaatgtaacaattaaa 1259632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 14284244 - 14284323
Alignment:
Q  34 aagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||| |||| |||||| ||||||||||||    
T  14284244 aagtatagcttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgt-aaatgtcaaaatgtgacaattaaa 14284323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 25983774 - 25983669
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgac 107  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||| | ||||||||||||| ||||||||| ||||||| ||||    
T  25983774 ttaaatgaacaaagtcattatagtaaaagtataacttatt-catcaaaaatagtaacaattgtagattatcttaatttgtgtaaaatgtcaaaaactgac 25983676  T
Q  108 aattaaa 114  Q
    |||||||    
T  25983675 aattaaa 25983669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29698117 - 29698231
Alignment:
Q  1 tgagatattaaatgaataaag-tcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    |||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| || ||||| |||||| |||||||| ||||||||| ||||    
T  29698117 tgagatattaaatgaatagaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttaatttgtgtaaaatgtcaa 29698216  T
Q  100 aaagtgacaattaaa 114  Q
    || ||||||||||||    
T  29698217 aatgtgacaattaaa 29698231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19550373 - 19550486
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||||||| ||||| ||||| |||||| ||||| || ||||||||| |||||    
T  19550373 tgagatattaaatgaataaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaattgttgattgtcttagtttgtgtaaaatgtcaaa 19550472  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  19550473 atgtgacaattaaa 19550486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 29803779 - 29803888
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| || ||||| |||||| ||||  ||||||||||||||||||| ||    
T  29803779 atattaaatgaataagatcattatagtaaaagtataacttattgcatcaataatagtatcaattgttgattgtcttggttcgtgtaaaatatcaaaatgt 29803878  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  29803879 gacaattaaa 29803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45145255 - 45145368
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||||||  ||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||| ||||  || |||||||||||||||    
T  45145255 tgagatgttaaatgaataagatcattatagtaaaagtataacttattgcagcaaaagtaataataattattgattgtcttggtttgtgtaaaatatcaaa 45145354  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  45145355 aaatgacaattaaa 45145368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 32980769 - 32980880
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||||||||||| || ||||||||||||||| ||||  || ||||||||| ||||||     
T  32980769 agatattaaatgaataaggtcagtataataaaagtataacttattgcatcaaaagtattaacaattattgattgtcttggtttgtgtaaaatgtcaaaat 32980868  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  32980869 gtgacaattaaa 32980880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 53745398 - 53745288
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||||||||  || ||||||||| |||||| |    
T  53745398 gatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatg 53745299  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  53745298 tgacaattaaa 53745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33491258 - 33491145
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||||| ||  |||||||| |||||    
T  33491258 tgagatattaaataaataaggttattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaa 33491159  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  33491158 atgtgacaattaaa 33491145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 34266559 - 34266446
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  34266559 tgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 34266460  T
Q  101 aagtgacaattaaa 114  Q
    | ||||| ||||||    
T  34266459 atgtgacgattaaa 34266446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35315259 - 35315372
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| ||||||||| || ||||||||| || ||||||||||||||||||||||| || |||||||| |||||| |||| ||| ||||||||| |||||    
T  35315259 tgagatgttaaatgaacaaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatttgtgtaaaatgtcaaa 35315358  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  35315359 aaatgacaattaaa 35315372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39866968 - 39866855
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| || || |||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||| ||||  || ||||||||| |||||    
T  39866968 tgagatgttaaattaacaaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaa 39866869  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  39866868 aagtgacaattaaa 39866855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 47069976 - 47069863
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  47069976 tgagatattaaatgaataaaattattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 47069877  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  47069876 atgtgacaattaaa 47069863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 40139951 - 40139860
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaat 94  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||  || |||||||||    
T  40139951 agatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaat 40139860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 54911418 - 54911308
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||| ||   |||||||| | ||||     
T  54911418 agatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtctt-atatatgtaaaattttaaaat 54911320  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  54911319 gtgacaattaaa 54911308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17102881 - 17102994
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||||||||| ||||||||| || |||||||| |||||||||||||| || ||||||||||| ||| | |||||| ||||||||| |||||    
T  17102881 tgagatgttaaatgaataaggtcattataataaaagtataaattattgcatcaaaagtagtaacaattattaattgttttaatttgtgtaaaatgtcaaa 17102980  T
Q  101 aagtgacaattaaa 114  Q
    || | |||||||||    
T  17102981 aaataacaattaaa 17102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 24981421 - 24981530
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| |||||||  |||||||||||||| || || ||||| |||||||||||| || ||| ||||| |||||| ||    
T  24981421 atattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttagtttgtgcaaaatgtcaaaatgt 24981520  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  24981521 gacaattaaa 24981530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43775509 - 43775396
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| |||||    
T  43775509 tgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaa 43775410  T
Q  101 aagtgacaattaaa 114  Q
    | |||| |||||||    
T  43775409 atgtgaaaattaaa 43775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45055314 - 45055427
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||| ||||||| ||| || ||||||||||| |||| |||  |||||||||| |||    
T  45055314 tgagatgttaaattaataatgtcattatagtaaaagtataacttattgtatcaaaagtaaaaataattattgattgtcttgatttatgtaaaatattaaa 45055413  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  45055414 aattgacaattaaa 45055427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3376423 - 3376316
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || || |||||||| ||| ||||||| ||||||| ||||||||||||| ||  |||||||| |||||    
T  3376423 tgagatattaaatgaataaggtcattatagtaaaaatacaacttattacataaaaaatagtaacaatcattgattatcttagtttatgtaaaatgtcaaa 3376324  T
Q  101 aagtgaca 108  Q
    | ||||||    
T  3376323 atgtgaca 3376316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 790680 - 790782
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||| |    
T  790680 gatattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatg 790779  T
Q  104 tga 106  Q
    |||    
T  790780 tga 790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 52627354 - 52627244
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||  || ||||||||  |  | | ||||| |||||| |    
T  52627354 gatattaaatgaataaagtcattatagtaaaagtataacttattgcatcaaaagtaatatcaatcgttaattatcttggtatgaggaaaatgtcaaaatg 52627255  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  52627254 tgacaattaaa 52627244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28885805 - 28885917
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||| ||||| ||||||  ||  |||||||| | |||    
T  28885805 tgagatattaaatgaataaggtcattatagta-aagtacaacttattgcatcaaaagtagtaacaataattgactatcttggtttatgtaaaatgttaaa 28885903  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  28885904 atgtgacaattaaa 28885917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29651795 - 29651908
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || ||| | |||||| | ||  || ||||||||| | |||    
T  29651795 tgagatattaaatgaataaagtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaactgttgattgttttggtttgtgtaaaatgtaaaa 29651894  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  29651895 atgtgacaattaaa 29651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 43554520 - 43554629
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||  | ||||| |||||| ||||  || ||||||||| |||||| ||    
T  43554520 atattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtatgatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgt 43554619  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  43554620 gacaattaaa 43554629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 52663569 - 52663682
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| || || |||||||||||| ||||  || |||| |||| |||||    
T  52663569 tgagatattaaatgaataaggtcattatagcaaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtgaaatgtcaaa 52663668  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  52663669 atatgacaattaaa 52663682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 54106390 - 54106503
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||||||||||||| ||||| ||||| |||||| ||||  ||  |||||||| |||||    
T  54106390 tgagatattaaatgaataaggtcattatagtaaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaa 54106489  T
Q  101 aagtgacaattaaa 114  Q
    | || |||||||||    
T  54106490 atgtaacaattaaa 54106503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 54898205 - 54898092
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||| || || ||||| |||||| ||||  ||  |||||||| |||||    
T  54898205 tgagatattaaatgaataaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaa 54898106  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  54898105 atgtgacaattaaa 54898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51697683 - 51697571
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaa-gtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaa 99  Q
    ||||||||||||||||||| |||||||||||| || ||||| |||||||||||||||||| || ||||| |||||| ||||  || ||||||||| ||||    
T  51697683 tgagatattaaatgaataaggtcattatagtaaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaa 51697584  T
Q  100 aaagtgacaatta 112  Q
    ||  |||||||||    
T  51697583 aatatgacaatta 51697571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 42672007 - 42671896
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| || ||||||||| |||||||  |||||||||||||| ||||| ||||| |||||| ||||| ||  | |||||| ||||||     
T  42672007 agatattaaatgaataaggttattatagtaaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttagtttatataaaatgtcaaaat 42671908  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  42671907 gtgacaattaaa 42671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27483907 - 27483794
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||||||| || || ||||| |||||| || | ||| || |||||| | |||    
T  27483907 tgagatattaaatgaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtatcaattgttgattgtcctgatttgtataaaatgttaaa 27483808  T
Q  101 aagtgacaattaaa 114  Q
    |  |||||||||||    
T  27483807 atatgacaattaaa 27483794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27992371 - 27992480
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || || ||||| |||||| | ||   | ||||||||| |||||| ||    
T  27992371 atattaaatgaataaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtattgggttgtgtaaaatgtcaaaatgt 27992470  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  27992471 gacaattaaa 27992480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 46973554 - 46973663
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||| || || ||||| ||||||   ||  || |||||||||||||||| ||    
T  46973554 atattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtatcaattgttgattgctttggtttgtgtaaaatatcaaaatgt 46973653  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  46973654 aacaattaaa 46973663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41926805 - 41926920
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaa---aataataacaattattgattatcttaattcgtgtaaaatatc 97  Q
    |||||| ||||||||||||  |||| |||||| ||||||||||||||||||||||   | || ||||||||||||||| ||||  || ||||||||| |     
T  41926805 tgagatgttaaatgaataagatcatcatagtaaaagtataacttattgcatcaaaagtagtagtaacaattattgattgtcttggtttgtgtaaaatgt- 41926903  T
Q  98 aaaaagtgacaattaaa 114  Q
    |||||||||||||||||    
T  41926904 aaaaagtgacaattaaa 41926920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45101477 - 45101364
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| ||  | ||  | |||||| ||||  || ||||||||| |||||    
T  45101477 tgagatattaaatgaataaggtcattataggaaaagtatagcttattgcatcaaaagtagcatcagctgttgattgtcttggtttgtgtaaaatgtcaaa 45101378  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  45101377 atgtgacaattaaa 45101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48152112 - 48152225
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||| |||||||||| || ||||||||| |||||| |  ||||| ||||||| |||||| | ||||||||| | || ||| ||||||||||| |||    
T  48152112 tgagatatcaaatgaataaggttattatagtaaaagtatgaagtattgtatcaaaagtaataatatttattgattgtattgatttgtgtaaaatataaaa 48152211  T
Q  101 aagtgacaattaaa 114  Q
    || |||||||||||    
T  48152212 aaatgacaattaaa 48152225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 36234497 - 36234604
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||||||||||  |||||| |||| ||||||| ||||||| ||||||| ||    || || |||||| |||||||| |||||||||||||||| |    
T  36234497 gatattaaatgaataagatcattacagtaaaagtatagcttattgtatcaaaagtat---cactttttgattgtcttaatttgtgtaaaatatcaaaatg 36234593  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  36234594 tgacaattaaa 36234604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 11473531 - 11473642
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| | ||||| ||||||| | ||||| || ||||||||| |||||||    
T  11473531 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaacatttattgaatgtcttagtttgtgtaaaatgtcaaaaa 11473630  T
Q  103 gtgacaattaaa 114  Q
    | ||||||||||    
T  11473631 gcgacaattaaa 11473642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 3643311 - 3643202
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| ||||| || | |||| ||||||| || ||||| || |||||| | || ||| ||||||||| |||||||||    
T  3643311 atattaaattaataaggtcattatagtaaaagtaaaaataattgtatcaaaagtagtaacatttcttgattgtattgatttgtgtaaaatgtcaaaaagt 3643212  T
Q  105 gacaattaaa 114  Q
    |||| |||||    
T  3643211 gacacttaaa 3643202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 6902409 - 6902518
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| |||||||||||| || |||| ||||||||||||||  || || ||||| |||||  ||||  || |||||||||||||||| ||    
T  6902409 atattaaataaataaggtcattatagtaaaattatagcttattgcatcaaatgtagtatcaattgttgatggtcttggtttgtgtaaaatatcaaaatgt 6902508  T
Q  105 gacaattaaa 114  Q
    |||| |||||    
T  6902509 gacagttaaa 6902518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 41351309 - 41351200
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||  ||||||| || ||||| | ||||| | |||| |||  |||||||||||| |||||    
T  41351309 atattaaatgaataaggttattatagtaaaagtatatattattatatcaaaagtagtaacattaattgaatgtcttgatttatgtaaaatatcagaaagt 41351210  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  41351209 gacaattaaa 41351200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43945506 - 43945619
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  |||||| |||| |||||||  ||||||||||||||||| || ||||| |||||| ||||  ||  | |||||| |||||    
T  43945506 tgagatattaaatgaataagatcattacagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttggtttatataaaatgtcaaa 43945605  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||| ||||    
T  43945606 atgtgacaactaaa 43945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 47104270 - 47104161
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| |||||||||||||||||| ||||| ||   |||  |||||||||| ||||| ||||||||| | || |||  |||||||| |||||||||    
T  47104270 atattaaattaataaagtcattatagtaaaagtaaaatcaattatatcaaaaatagtaacatttattgattgttttgatttatgtaaaatgtcaaaaagt 47104171  T
Q  105 gacaattaaa 114  Q
    | ||||||||    
T  47104170 ggcaattaaa 47104161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44544146 - 44544078
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaatta 69  Q
    |||||||||||||||| || || ||||||||| ||||||||||||||| ||||||| || |||||||||    
T  44544146 tgagatattaaatgaaaaaggttattatagtaaaagtataacttattgtatcaaaagtattaacaatta 44544078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51244751 - 51244851
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  |||||||| || || |||  ||||||||||||||| || || ||||| |||||| ||||  || |||||||||||||||    
T  51244751 tgagatattaaatgaataagatcattataataaaaatatggcttattgcatcaaaactagtatcaattgttgattgtcttggtttgtgtaaaatatcaaa 51244850  T
Q  101 a 101  Q
    |    
T  51244851 a 51244851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 49123650 - 49123762
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaa--gtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatca 98  Q
    ||||||||||||||||||| |||||||||||| ||  |||||  |||||||||||||  || || ||   |||||||||||| ||| ||||||||| |||    
T  49123650 tgagatattaaatgaataaggtcattatagtaaaagtgtatagtttattgcatcaaatgtagtatca---attgattatcttgatttgtgtaaaatgtca 49123746  T
Q  99 aaaagtgacaattaaa 114  Q
    ||| ||||| ||||||    
T  49123747 aaatgtgactattaaa 49123762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 51219211 - 51219099
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaa---ttattgattatcttaattcgtgtaaaatatcaaaa 101  Q
    |||| ||||||||||  ||||||||||| ||||||||||||||||||||||| || || |||   || |||||| ||||  || ||||||||| |||| |    
T  51219211 atatgaaatgaataagatcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgttgattgtcttggtttgtgtaaaatgtcaata 51219112  T
Q  102 agtgacaattaaa 114  Q
     ||||||||||||    
T  51219111 tgtgacaattaaa 51219099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 13158554 - 13158445
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||  ||||||| || || ||||| || ||| ||||  ||  |||||||| ||||||  |    
T  13158554 atattaaatgaataaggtcattatagtaaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatat 13158455  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  13158454 aacaattaaa 13158445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29458322 - 29458209
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||  |||| ||||||||| ||||  || ||||||||| |||||    
T  29458322 tgagatattaaataaataaggttattatagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgtcaaa 29458223  T
Q  101 aagtgacaattaaa 114  Q
    | ||||| ||||||    
T  29458222 atgtgacgattaaa 29458209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40319047 - 40318934
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || |||| |||| || || || |||||| ||||||| ||  |||| ||||||||||||||  || ||||||||| | |||    
T  40319047 tgagatattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattatcttggtttgtgtaaaatgttaaa 40318948  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  40318947 atgtgacaattaaa 40318934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7328582 - 7328637
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    |||||| |||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  7328582 tgagatgttaaatgaataaggtcattataatgaaagtataacttattgcatcaaaa 7328637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45513734 - 45513679
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    ||||||||||||||||||| |||||||||||| || ||||  ||||||||||||||    
T  45513734 tgagatattaaatgaataaggtcattatagtaaaaatatagtttattgcatcaaaa 45513679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 50092074 - 50092185
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||||| |||||| || | ||| ||||||| ||||| | | ||||  || ||||||||| |||||||    
T  50092074 agatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaaataacatttatttagtgtcttggtttgtgtaaaatgtcaaaaa 50092173  T
Q  103 gtgacaattaaa 114  Q
    | |||| |||||    
T  50092174 gcgacagttaaa 50092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 31610148 - 31610094
Alignment:
Q  58 taataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaatta 112  Q
    |||||||| ||||||||| |||| |||  ||||||||||||||||||||||||||    
T  31610148 taataacatttattgattgtcttgatttatgtaaaatatcaaaaagtgacaatta 31610094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13168144 - 13168197
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaa 54  Q
    |||||||||||||||||||  | || |||||| |||||||||||||||||||||    
T  13168144 tgagatattaaatgaataagctaatcatagtaaaagtataacttattgcatcaa 13168197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 20848839 - 20848730
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||| ||||| | |||||||||| ||||| ||   |||| ||||||| || ||||| ||||||||||| ||  || ||||||||| |||||| ||    
T  20848839 atattaaattaataaggccattatagtaaaagtaaaaacaattgtatcaaaagtagtaacatttattgattattttggtttgtgtaaaatgtcaaaatgt 20848740  T
Q  105 gacaattaaa 114  Q
    |||| |||||    
T  20848739 gacagttaaa 20848730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33074397 - 33074284
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || ||||||||| || || || |||||| ||||||| ||  | || ||||||||| ||||  || ||||||||| |||||    
T  33074397 tgagatattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagcagcatttattgattgtcttggtttgtgtaaaatgtcaaa 33074298  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||| ||||    
T  33074297 atgtgacaaataaa 33074284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41425756 - 41425869
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| ||||| || |||| |||| || || || |||||| ||||||| ||  |||| ||||||||| ||||  || ||||||||| | |||    
T  41425756 tgagatattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaa 41425855  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  41425856 atgtgacaattaaa 41425869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 40010781 - 40010670
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||| ||| || ||||||||| |||||  | |||||| || | ||| | ||||| ||||||| | ||||  || |||||||||||||||||    
T  40010781 agatattaaatgactaaggttattatagtaaaagtactaattattgtataagaaaaagtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaa 40010682  T
Q  103 gtgacaattaaa 114  Q
    || ||| |||||    
T  40010681 gtaacacttaaa 40010670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42671532 - 42671477
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaa 56  Q
    ||||||||||||| |||||||| ||||||||| || ||||| |||||| |||||||    
T  42671532 tgagatattaaataaataaagttattatagtacaaatataaattattgtatcaaaa 42671477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 55141595 - 55141521
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgatt 75  Q
    ||||||||||||||||||| || ||||||||| |||||| |  ||||  |||||||||| ||| | |||||||||    
T  55141595 tgagatattaaatgaataaggttattatagtaaaagtatgaagtattatatcaaaaatagtaatatttattgatt 55141521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 24179 - 24070
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| || ||||||||| |||||||  |||||| ||||||| || ||| | ||||| | | ||||  ||  |||||||| ||| |||||    
T  24179 atattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattaaatgtcttggtttatgtaaaatgtcacaaagt 24080  T
Q  105 gacaattaaa 114  Q
    |||| |||||    
T  24079 gacacttaaa 24070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 7329011 - 7329064
Alignment:
Q  61 taacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
    ||||||||||||||| ||||| || ||||||||| | |||| ||||||||||||    
T  7329011 taacaattattgattgtcttagtttgtgtaaaatgttaaaatgtgacaattaaa 7329064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 27039723 - 27039619
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||||||||| |  ||||||||| |||||  | |||||| || | ||| | ||||| ||||||| | ||||  || ||||||||| |||||||    
T  27039723 agatattaaatgaataaggctattatagtaaaagtactaattattgtataagaaaaagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaa 27039624  T
Q  103 gtgac 107  Q
    |||||    
T  27039623 gtgac 27039619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8281 - 8394
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| || || ||||| |||||| ||||  || ||||||||| |||||    
T  8281 tgagatattaaatgaataagatcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaa 8380  T
Q  101 aagtgacaattaaa 114  Q
    | ||||||||||||    
T  8381 atgtgacaattaaa 8394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 77215 - 77327
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||||  |||||||||||||| || || ||||| |||||| |||| ||| ||||||||| | |||    
T  77215 tgagatattaaatgaataaggttattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaa 77314  T
Q  101 aagtgacaattaa 113  Q
    | |||||||||||    
T  77315 atgtgacaattaa 77327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 4644 - 4754
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||||||||||| || ||||||||||||||| ||||  ||  ||||||||| | |||     
T  4644 agatattaaataaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaata-ccaaat 4742  T
Q  103 gtgacaattaaa 114  Q
    ||||||||||||    
T  4743 gtgacaattaaa 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26237 - 26128
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| ||||||||| || ||||||| ||||||||||||||| ||||| ||||| |||||| ||||  ||  |||||||| ||||||  |    
T  26237 atattaaatgaataaggtcattataataaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatat 26138  T
Q  105 gacaattaaa 114  Q
    ||||||||||    
T  26137 gacaattaaa 26128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 2941 - 3049
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataac-aattattgattatcttaattcgtgtaaaatat-caaaaagtg 105  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||||| || |||| ||||| ||||| ||||  || |||||||||||  ||||||||    
T  2941 ttaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtaacaaattactgattgtcttggtttgtgtaaaatataaaaaaagtg 3040  T
Q  106 acaattaaa 114  Q
    |||||||||    
T  3041 acaattaaa 3049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 69229 - 69336
Alignment:
Q  3 agatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaa 102  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||| | | |||| |||||| ||||  || ||||||||| ||||||     
T  69229 agatattaaatgaataagttcattatagtaaaagtatagcttattgcatcaaaaatagt-ataattgttgattgtcttggtttgtgtaaaatgtcaaaat 69327  T
Q  103 gtgacaatt 111  Q
    |||||||||    
T  69328 gtgacaatt 69336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 81 - 2
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatctt 80  Q
    |||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||| || ||| ||||||||||| ||||    
T  81 tgagatgttaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaataattattgattgtctt 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 49279 - 49386
Alignment:
Q  7 attaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtga 106  Q
    ||||||||||||| ||||||||| || |||||||  |||||||||||||| || || ||||| |||||| ||||  || | ||||||| |||||| ||||    
T  49279 attaaatgaataaggtcattataataaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatgtcaaaatgtga 49378  T
Q  107 caattaaa 114  Q
    ||||||||    
T  49379 caattaaa 49386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 195698 - 195588
Alignment:
Q  4 gatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaag 103  Q
    ||||||||||||||||  || |||||||| |||||||  |||||| |||||| ||| || ||||| | |||||||||  || ||||||||| |||||| |    
T  195698 gatattaaatgaataagatcgttatagtaaaagtatagtttattgtatcaaacatagtatcaattgtcgattatcttggtttgtgtaaaatgtcaaaatg 195599  T
Q  104 tgacaattaaa 114  Q
    |||||||||||    
T  195598 tgacaattaaa 195588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 419606 - 419493
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaa 100  Q
    ||||||||||||| |||||  | ||||||||| |||||| | |||||| ||||||| || ||||| ||||||||| ||||  ||  |||||||| ||| |    
T  419606 tgagatattaaataaataagattattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcaca 419507  T
Q  101 aagtgacaattaaa 114  Q
    ||||||||||||||    
T  419506 aagtgacaattaaa 419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 7558 - 7664
Alignment:
Q  8 ttaaatgaataaagtcattatagtagaagta-taacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtga 106  Q
    |||||| || || |||||||||||| ||||| ||||  |||| ||||||| || ||| | ||||||||| |||| ||| |||||||||||||||||||||    
T  7558 ttaaattaacaaggtcattatagtaaaagtaataaca-attgtatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtga 7656  T
Q  107 caattaaa 114  Q
    ||||||||    
T  7657 caattaaa 7664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 148434 - 148543
Alignment:
Q  5 atattaaatgaataaagtcattatagtagaagtataacttattgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagt 104  Q
    ||||||||||||||| |||||||||||| ||||||||||||||  ||||||| || || ||||| || ||| ||||  ||  |||||||| ||||||  |    
T  148434 atattaaatgaataaggtcattatagtaaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatat 148533  T
Q  105 gacaattaaa 114  Q
     |||||||||    
T  148534 aacaattaaa 148543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 138844 - 138791
Alignment:
Q  1 tgagatattaaatgaataaagtcattatagtagaagtataacttattgcatcaa 54  Q
    |||||||||||||||||||  | || |||||| |||||||||||||||||||||    
T  138844 tgagatattaaatgaataagctaatcatagtaaaagtataacttattgcatcaa 138791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14835 - 14762
Alignment:
Q  1 tgagatattaaatgaataaagtc-attatagtagaagtataacttattgcatcaaaaataataacaattattgat 74  Q
    ||||||||||||||||| ||||| ||||||||| |||||| | |||||| ||||||| || ||||| ||||||||    
T  14835 tgagatattaaatgaat-aagtctattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgat 14762  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 147197 - 147128
Alignment:
Q  45 attgcatcaaaaataataacaattattgattatcttaattcgtgtaaaatatcaaaaagtgacaattaaa 114  Q
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T  147197 attgtatcaaaagtagtaacatttattaattgttttgatttgtgtaaaatgtcaaaaagtgacaattaaa 147128  T

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