View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1894_low_10 (Length: 498)
Name: NF1894_low_10
Description: NF1894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1894_low_10 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-159; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 97 - 484
Target Start/End: Original strand, 14027477 - 14027869
Alignment:
| Q |
97 |
ataattataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggat |
196 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||| ||| |
|
|
| T |
14027477 |
ataataataatcaccatgaaggtcgagcataagtacatggccagtgatattgctgcaaccaattccataccattcgcagcaatcttctgttgtccaagat |
14027576 |
T |
 |
| Q |
197 |
gacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagtt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14027577 |
gacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaaact |
14027676 |
T |
 |
| Q |
297 |
ggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttatgtgt- |
395 |
Q |
| |
|
||| |||||| |||| |||||| |||||||||||| |||||||||||| | | ||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14027677 |
ggtctgcttgcaacaccaaacatatgagaaatatggcttgaatcaatttcatagaaaatggattcataattgacattgtggtcatcacaagttatgtgtc |
14027776 |
T |
 |
| Q |
396 |
----tatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataataatcacattgtggtcatgaatgat |
484 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14027777 |
aagatatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataataatcacattgtggtcatgaatgat |
14027869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 80 - 482
Target Start/End: Original strand, 13943351 - 13943764
Alignment:
| Q |
80 |
taattataatcataattataattat---aatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagc |
176 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||||||| |||||||||| ||||| ||||||| |||| |||||||||||| | ||||||||||| |
|
|
| T |
13943351 |
taattataatcataattataatgatcataattaccatgaaggtcgagcataattacatgaccagtgacgttgctgcaaccaattcccttccattggcagc |
13943450 |
T |
 |
| Q |
177 |
aatcttcagttgtccaggatgacaacatgc---caaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaac |
273 |
Q |
| |
|
||||||| || ||||| ||||||| |||| || ||| |||| ||||||| |||||||| || ||||| |||||||||||||| ||||| ||||| |
|
|
| T |
13943451 |
aatcttctgtcgtccaagatgacagcatgttgtcatattcatcaataaggccagctttgaattgtagaagtgcttgcctctcactttgtatgcacctaac |
13943550 |
T |
 |
| Q |
274 |
aacctcttttgaacaaacaagttggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacatt |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13943551 |
aacctcttttgaacaaacaagttggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagttgattcataattgacatt |
13943650 |
T |
 |
| Q |
374 |
gtggtcatcacaagttatgtgt-----tatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataataatcacat |
468 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
13943651 |
gtggtcatcacaagttatgtgtcaagatatgtttgtaatttgattgaatgttgtgtgtacataattgcattgccaatagctgaatttataataattacgt |
13943750 |
T |
 |
| Q |
469 |
tgtggtcatgaatg |
482 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
13943751 |
tgtggtcatgaatg |
13943764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 100 - 393
Target Start/End: Original strand, 14017439 - 14017732
Alignment:
| Q |
100 |
attataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgac |
199 |
Q |
| |
|
|||||||||||||||||| | ||||||||| ||||| ||||||| |||| |||||||||||||||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
14017439 |
attataatcaccatgaaggttgagcataagtacatgaccagtgaggttgctgcaaccaattccataccattcgcagcaatcttctgttgtccaagatgac |
14017538 |
T |
 |
| Q |
200 |
aacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagttggt |
299 |
Q |
| |
|
||||||||||| | |||||||||||| ||||||| || || ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
14017539 |
aacatgccaaactcatcaacaaggccatacttgaactgtagaagtgccttcctctcactttgaatacatctaacaacctcttttgaacaaataagttggt |
14017638 |
T |
 |
| Q |
300 |
atgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttatgt |
393 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14017639 |
ctgcttgaaacaccaaacacatgagaaatatgatttgaatcaatttaaaacaaaatggattcataattgacattgtggtcatcacaagttatgt |
14017732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 97 - 460
Target Start/End: Original strand, 14049264 - 14049616
Alignment:
| Q |
97 |
ataattataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggat |
196 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
14049264 |
ataattataatcaccatgaagatcgagcataagtacatggccagtgatattgctgcaaccaattccataccattggcagcaatcttcagttgtccaaaat |
14049363 |
T |
 |
| Q |
197 |
gacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagtt |
296 |
Q |
| |
|
||||||||| |||||| |||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||||| |||||||| | |
|
|
| T |
14049364 |
gacaacatgtcaaattcatcaataaggccagacttgaattgcagaagtgcctgtctctcactttgtatgcacctgacaacctcttttgagcaaacaagct |
14049463 |
T |
 |
| Q |
297 |
ggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttatgtgtt |
396 |
Q |
| |
|
||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||| | | |
|
|
| T |
14049464 |
ggtctgcttgcaacaccaaacacatgagaaatatgatttgaatcaatttaaaacaaaatggattcatgattgacattgtggtcatgacaa-------gat |
14049556 |
T |
 |
| Q |
397 |
atgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataat |
460 |
Q |
| |
|
|| |||||||||||||||||||| |||||| | || |||| |||||| ||||||||||||| |
|
|
| T |
14049557 |
atatttgtaatttgattgattgtagtgtgttc----ttacatttccaataactgaatttataat |
14049616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 92 - 461
Target Start/End: Original strand, 14087014 - 14087384
Alignment:
| Q |
92 |
taattataattataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtcc |
191 |
Q |
| |
|
|||| ||||| ||||| ||||||||| | ||||||||| ||||||||||||| ||||| |||||||||||| | |||||||||||||||||| || |||| |
|
|
| T |
14087014 |
taatcataatcataattaccatgaaggttgagcataagtacatggccagtgaggttgttgcaaccaattcccttccattggcagcaatcttctgtcgtcc |
14087113 |
T |
 |
| Q |
192 |
aggatgacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaac |
291 |
Q |
| |
|
| ||||||| ||||||| || ||| |||| || ||| ||||| || ||||| |||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
14087114 |
aagatgacagcatgccatatggatcagtaagggcagccttaaattgaagaagtgctgtcctctcactttgtatgcacctaacaacctcttttgaacaaac |
14087213 |
T |
 |
| Q |
292 |
aagttggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttat |
391 |
Q |
| |
|
||| |||| | |||| |||| |||| | ||||||||||| |||| | |||||| ||||||| | ||||||| ||||||| ||||||||| ||||||||| |
|
|
| T |
14087214 |
aagctggtctacttgcaacaccaaatatatgagaaatattgtttggaccaatttcaaacaaaatagattcatgattgacaatgtggtcatgacaagttat |
14087313 |
T |
 |
| Q |
392 |
gt-----gttatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataata |
461 |
Q |
| |
|
|| | ||||| |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
14087314 |
gtatcaagatatgtatgtaatttgattgattgttgcgtgttc----ttgcattgccaatagctgaatttataata |
14087384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 101 - 426
Target Start/End: Complemental strand, 13872814 - 13872483
Alignment:
| Q |
101 |
ttataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgaca |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
13872814 |
ttataatcaccatgaagatcgagcataagtacatggccagtgaggttgctgcaacgaattccataccattggcagcaatctgccgttgtccaagatgaca |
13872715 |
T |
 |
| Q |
201 |
acatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagttggta |
300 |
Q |
| |
|
|||||||| |||| ||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
13872714 |
acatgccattcacatcaataaggccagccttgaatttaaggagtgcctgtctctcactttgtatgcacctaacaacctcttttgaacaaacaa---ggtc |
13872618 |
T |
 |
| Q |
301 |
tgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtc----atcacaagttatgt--- |
393 |
Q |
| |
|
|||||| ||| |||||||||||||||||| |||| |||||||| |||||| | ||||||| |||| |||||||||| |||||||||||| | |
|
|
| T |
13872617 |
tgcttgcaacgccaaacacatgagaaatattgtttgtatcaatttcaaacaagatggattcatcattggcattgtggtcatcgatcacaagttatttatc |
13872518 |
T |
 |
| Q |
394 |
--gttatgtttgtaatttgattgattgttgtgtgt |
426 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||| |
|
|
| T |
13872517 |
aagatatatttgtaatttgattgattgttgtgtgt |
13872483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 100 - 463
Target Start/End: Original strand, 14112873 - 14113242
Alignment:
| Q |
100 |
attataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggatgac |
199 |
Q |
| |
|
|||||| | ||||||||| |||||||||| ||||| | ||||| |||| |||||||||||| | |||||||||||||||||| || |||| |||||| |
|
|
| T |
14112873 |
attatagttaccatgaaggtcgagcataattacatgacaagtgacgttgctgcaaccaattcccttccattggcagcaatcttctgtcctccaagatgac |
14112972 |
T |
 |
| Q |
200 |
aacatgc---caaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagtt |
296 |
Q |
| |
|
| |||| || | ||| ||||||| ||||||||| || |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
14112973 |
agcatgttgtcatacacatcagtaaggccagccttgaattgtagaagtgcctgcctctcactttgtatgcacctaacagcctcttttgaacaaacaag-- |
14113070 |
T |
 |
| Q |
297 |
ggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaag-ttatgt-- |
393 |
Q |
| |
|
|| |||||| |||| |||| |||||||||||| ||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||| || ||| |
|
|
| T |
14113071 |
-gtctgcttgcaacaccaaagacatgagaaataggatttgaatcaatttcaaacaaaatggatccatcattgacattgtggtcatcacaagtttctgtag |
14113169 |
T |
 |
| Q |
394 |
---gttatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataataat |
463 |
Q |
| |
|
| ||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
14113170 |
caagatatgtatgtaatttgattgaatgttgtgtgtacttaattgcattgacaatagctgaatttataataat |
14113242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 97 - 463
Target Start/End: Complemental strand, 13470590 - 13470226
Alignment:
| Q |
97 |
ataattataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagttgtccaggat |
196 |
Q |
| |
|
||||||| |||| |||||||| | |||||||| ||||| |||||| |||| |||||||||||| | |||||||||||||||||| || ||||| ||| |
|
|
| T |
13470590 |
ataattaaaatctccatgaaggttgagcataattacatgatcagtgaggttgctgcaaccaattcccttccattggcagcaatcttctgtcgtccaagat |
13470491 |
T |
 |
| Q |
197 |
gacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagtt |
296 |
Q |
| |
|
|||||||||||| | | |||| |||| || ||||||||| || |||||||||||||||||||| ||||| || ||||| | |||||||||||||| |
|
|
| T |
13470490 |
gacaacatgccatagtcatcaataagggcagccttgaattgaagaagtgcctgcctctcactttgtatgcacctgacaactttttttgaacaaacaa--- |
13470394 |
T |
 |
| Q |
297 |
ggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttatgt--- |
393 |
Q |
| |
|
|||||||| |||| |||||| ||||||||||| ||||| ||||||| ||||||| | ||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
13470393 |
aatatgcttgcaacaccaaacagatgagaaatattgtttgactcaatttcaaacaaaatggattcatcattgacattgtggtcatgacaagttatgtatc |
13470294 |
T |
 |
| Q |
394 |
--gttatgtttgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataataat |
463 |
Q |
| |
|
| ||| |||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
13470293 |
aagatatatttgtaatttgatttattgttgtgtgctc----tttcattgccaatagctgaatttataataat |
13470226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 79 - 393
Target Start/End: Complemental strand, 13860711 - 13860388
Alignment:
| Q |
79 |
ataattataatcataattataatta------taatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattgg |
172 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||| ||||| | |||| |||||||||||| | ||||||| |
|
|
| T |
13860711 |
ataattataatcatcattataattaccataataattaccatgaaggtcgagcataattacatgaccagttacgttgctgcaaccaattcccttccattgg |
13860612 |
T |
 |
| Q |
173 |
cagcaatcttcagttgtccaggatgacaacatgc---caaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatc |
269 |
Q |
| |
|
||||||||||| || ||||| ||||||| |||| || | ||| ||||||| ||||||||| || || ||||||||||||||||| ||||| | |
|
|
| T |
13860611 |
cagcaatcttctgtcgtccaagatgacagcatgttgtcatacacatcagtaaggccagccttgaattgtagaagcgcctgcctctcactttgtatgcacc |
13860512 |
T |
 |
| Q |
270 |
taacaacctcttttgaacaaacaagttggtatgcttgaaacaacaaacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattga |
369 |
Q |
| |
|
|||||| |||||||||||||||||| |||| ||||| |||| |||||| |||||||||||| |||||||||||||| | ||| | ||||||||||||| |
|
|
| T |
13860511 |
taacaaactcttttgaacaaacaagctggtcagcttgcaacaccaaacatatgagaaatatggcttgaatcaatttaatagaaaatggattcataattga |
13860412 |
T |
 |
| Q |
370 |
cattgtggtcatcacaagttatgt |
393 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
13860411 |
cattttggtcatcacaagttatgt |
13860388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 88 - 294
Target Start/End: Complemental strand, 13890683 - 13890477
Alignment:
| Q |
88 |
atcataattataattataatcaccatgaagttcgagcataagcacatggccagtgatgttgtggcaaccaattccataccattggcagcaatcttcagtt |
187 |
Q |
| |
|
||||| || ||||||||| ||||||||||| |||||| |||| ||||| ||||||| |||| |||||||||||||||||||| |||||||||| | || |
|
|
| T |
13890683 |
atcattataataattatagtcaccatgaaggtcgagcttaagtacatgaccagtgaggttgctgcaaccaattccataccattcgcagcaatctgccgtc |
13890584 |
T |
 |
| Q |
188 |
gtccaggatgacaacatgccaaatttgtcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaac |
287 |
Q |
| |
|
||||| ||||||||||||||| ||| || ||| ||| ||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13890583 |
gtccaagatgacaacatgccatattcatcggtaagaccagccttgaattgaagaagtgcatgcctctcactttgaatgcatttaacaacctcttttgaac |
13890484 |
T |
 |
| Q |
288 |
aaacaag |
294 |
Q |
| |
|
||||||| |
|
|
| T |
13890483 |
aaacaag |
13890477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 215 - 459
Target Start/End: Original strand, 14000431 - 14000661
Alignment:
| Q |
215 |
tcaacaaggccaaacttgaattgcaggagtgcctgcctctcactttgaatgcatctaacaacctcttttgaacaaacaagttggtatgcttgaaacaaca |
314 |
Q |
| |
|
|||| ||||||| ||||||||| || ||||| | |||||||||||| ||||||||||||||||| |||||| |||||| || |||||| |||| || |
|
|
| T |
14000431 |
tcaataaggccagccttgaattgaagaagtgctttcctctcactttgtatgcatctaacaacctcctttgaataaacaaa---gtctgcttgcaacacca |
14000527 |
T |
 |
| Q |
315 |
aacacatgagaaatatgatttgaatcaatttaaaacaaagtcgattcataattgacattgtggtcatcacaagttatgtgttatgtttgtaatttgattg |
414 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
14000528 |
aacagatgagaaatattgtttgaatcaatttcaaacaaaatggattcataacttacattgtagtcatcacaagttatgt-----------aatttgattg |
14000616 |
T |
 |
| Q |
415 |
attgttgtgtgtacataattgcattgccaatagctgaatttataa |
459 |
Q |
| |
|
|| ||| ||||||| |||| |||||||||||| |||||||||| |
|
|
| T |
14000617 |
atggttttgtgtacttaatcagattgccaatagccgaatttataa |
14000661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 13890394 - 13890337
Alignment:
| Q |
402 |
tgtaatttgattgattgttgtgtgtacataattgcattgccaatagctgaatttataa |
459 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||||| || |||||||||| |||||||||| |
|
|
| T |
13890394 |
tgtaagttgattgattgttgtgtttacttaattacagtgccaatagccgaatttataa |
13890337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13890752 - 13890685
Alignment:
| Q |
1 |
ttgtaattgttgcaactccatcaatgattttttgatattaacgctgatataaaacttattgccatcat |
68 |
Q |
| |
|
|||||| |||||||||||||||||||| || | ||||| | | |||||||||| ||||||||||||| |
|
|
| T |
13890752 |
ttgtaactgttgcaactccatcaatgacttgtggatatcacccatgatataaaatttattgccatcat |
13890685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 13470665 - 13470601
Alignment:
| Q |
4 |
taattgttgcaactccatcaatgattttttgatattaacgctgatataaaacttattgccatcat |
68 |
Q |
| |
|
|||||| ||||||||||||||||| || | ||||| | | || |||||||| ||||||||||||| |
|
|
| T |
13470665 |
taattgctgcaactccatcaatgacttgtggatatcaccactcatataaaatttattgccatcat |
13470601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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